Protein Family IF04008

Metagenome Isolate
216 Members
113 Samples
107 Scaffolds
594.99 Avg Length

🧬 Representative Sequence

ID
3300012849|Ga0160447_102625|Ga0160447_1026255
Length
630 aa
Sequence
MCRKWCSCTLGSIDTSTPQNVCGVSFPGYLLLFARFAMADYKAPLRDMRFVLNEVFEVSRLWATLPELSEAVDAETVEAILEEAGKVTSRSVAPLSRAADEEGCHWKDSVVTTPTGFVQAYKTYAEGGWVGVGGNPEFGGMGMPKAVSAQVEEMVNSSSLAFGLYPMLTSGACVSINTHASEDLKATYLPNMYAGIWAGSMCLTEAHAGTDLGIIRTKAEPQVDGSYKISGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNGDGSLGARNTVSCGSIEHKMGIQASATCVMNFDQAEGYLIGEQNKGLAAMFTMMNYERLGVGIQGLASGERSYQNAIEYARDRLQSRAPTGAQSKNTIADPIIVHPDVRRMLLTMKALNEGGRAFSTYVAMQLDTAKYSEDAQVRERADGLVALLTPVAKAFLTDMGLDTTVHGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYRLFSEEVRQFISASDDSLGEFTKPLSAALTTLDDLTDWVLDRARTNPKEIGAASVEYLHVFGYTAYAYMWAMSAKAALGKEAQEDFYVSKLGTARFYFARLLPRIQSLAASVKAGSESLYLLDASQF*

📊 Sample Types

Isolate 44.0%
Metagenome 56.0%
MAG 0.0%
Metatranscriptome 0.0%
Single Cell 0.0%

🐛 Taxa Family Distribution

Elmidae 25.7%
Unclassified 15.8%
Formicidae 11.9%
Curculionidae 10.9%
Culicidae 10.9%
Termitidae 7.9%
Armadillidiidae 5.0%
Drosophilidae 3.0%
Siricidae 1.0%
Kalotermitidae 1.0%
Trigoniulidae 1.0%
Lysianassidae 1.0%
Daphniidae 1.0%
Tenebrionidae 1.0%
Noctuidae 1.0%
Muscidae 1.0%
Pediculidae 1.0%

🌳 Taxonomy

Archaea 0
Bacteria 188
Eukaryota 0
Viruses 0
Unclassified 28

🗂️ Samples

#Sample IDDescriptionTypeTaxa Family
1 2833478085 Oceanospirillum multiglobuliferum ATCC 33336 Isolate Unclassified
2 2864812326 Chitinimonas taiwanensis S00057 Isolate Elmidae
3 2864859030 Chromobacterium alkanivorans S00115 Isolate Elmidae
4 2864866972 Brevundimonas bullata S00123 Isolate Elmidae
5 2864874997 Acinetobacter lwoffii S00127 Isolate Elmidae
6 2864944480 Pseudomonas fluvialis S00202 Isolate Elmidae
7 2100351016 Sirex noctilio microbial communities from Pennsylvania, USA - adult community Metagenome Siricidae
8 2524614573 Marinospirillum minutulum DSM 6287 Isolate Unclassified
9 2619619079 Sphingomonas sp. Mn802worker Isolate Termitidae
10 8035321120 Pseudomonas prosekii A2-NA12 Isolate Curculionidae
11 2987233858 Stutzerimonas stutzeri AR9-4 Isolate Unclassified
12 2997878596 Pseudomonas bohemica IA9 Isolate Unclassified
13 3300002464 Anopheles gambiae gut viral communities from New Mexico State University, USA - SM1 Metagenome Culicidae
14 3300012806 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971M_E1 MG Metagenome
15 3300012819 Enriched pill bug-associated microbial communities from UW Madison campus, WI, USA - HID1972K_E11 MG Metagenome Armadillidiidae
16 3300012832 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973I_E6 MG Metagenome Culicidae
17 2864863795 Acinetobacter johnsonii S00116 Isolate Elmidae
18 2864951976 Brevundimonas bullata S00223 Isolate Elmidae
19 2519899622 Pseudomonas sp. Ag1 Isolate Culicidae
20 2687453754 Pseudomonadales bacterium Cag26 Isolate Unclassified
21 3300042648 Termite gut microbial communities of Incisitermes snyderi from Fort Lauderdale Research & Education Center, Florida, USA - Iy174 Metagenome Kalotermitidae
22 8011329375 Pseudomonas sp. S31 Isolate Curculionidae
23 8011357093 Pseudomonas schmalbachii Milli4 Isolate Trigoniulidae
24 3003178663 Psychrobacter fulvigenes KC-40 Isolate Unclassified
25 3007473699 Pseudomonas sp. S30 Isolate Curculionidae
26 3300007142 Ant gut microbial communities from Cephalotes grandinosus, Brazil Metagenome Formicidae
27 2843904799 Shewanella khirikhana TH2012 Isolate Unclassified
28 2035918003 Mountain Pine Beetle microbial communities from McBride, British Columbia, Canada - Lodgepole pine Metagenome Curculionidae
29 2582581321 Oceanospirillum multiglobuliferum ATCC 33336 Isolate Unclassified
30 2585427605 Colwellia sp. MT2012 Isolate
31 3300042582 Termite gut microbial communities of Astalotermes quietus from Ebogo II, Mbalmayo, Cameroon - Ast373 Metagenome Termitidae
32 3300042602 Termite gut microbial communities of Mastotermes darwinensis from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Md513 Metagenome Unclassified
33 3300003973 Ips typographus gut microbial communities from Hannover, Germany - first DNA extraction october 2014, adult beetle Metagenome Curculionidae
34 3300007095 Ant gut microbial communities from Cephalotes minutus, Brazil Metagenome Formicidae
35 3300012813 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973I_E11 MG Metagenome Culicidae
36 3300012847 Enriched pill bug-associated microbial communities from UW Madison campus, WI, USA - HID1972M_E1 MG Metagenome Armadillidiidae
37 2864745180 Pseudomonas rhodesiae S00002 Isolate Elmidae
38 2864804954 Acinetobacter johnsonii S00050 Isolate Elmidae
39 2864847319 Pseudomonas alcaligenes S00099 Isolate Elmidae
40 2864914039 Chromobacterium alkanivorans S00172 Isolate Elmidae
41 2864973726 Acinetobacter schindleri S00243 Isolate Elmidae
42 2864976888 Novosphingobium chloroacetimidivorans S00245 Isolate Elmidae
43 2864988360 Chromobacterium alkanivorans S00296 Isolate Elmidae
44 2044078006 Dendroctonus frontalis bacterial communities from Mississippi, USA Metagenome Curculionidae
45 2556921622 Terasakiella pusilla DSM 6293 Isolate Unclassified
46 2585428048 Colwellia sp. NBT2012 Isolate
47 8052469819 Pseudomonas putida DZ-F23 Isolate
48 3006190525 Acinetobacter sp. S54 Isolate Curculionidae
49 3300007188 Ant gut microbial communities from Cephalotes rohweri, Arizona, USA Metagenome Formicidae
50 3300012835 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973I_E1 MG Metagenome Culicidae
51 3300012837 Enriched pill bug-associated microbial communities from UW Madison campus, WI, USA - HID1972I_E6 MG Metagenome Armadillidiidae
52 3300012849 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973K_E1 MG Metagenome Culicidae
53 3300012854 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973M_E1 MG Metagenome Culicidae
54 2864751016 Pseudomonas oryzihabitans S00005 Isolate Elmidae
55 2864840607 Acinetobacter johnsonii S00071 Isolate Elmidae
56 2864955722 Sphingomonas kyeonggiensis S00224 Isolate Elmidae
57 2687453756 Pseudomonadales bacterium Cag32 Isolate Unclassified
58 637000219 Pseudomonas entomophila L48 Isolate Unclassified
59 8035326735 Pseudomonas prosekii A2-NA13 Isolate Curculionidae
60 2990166910 Pseudomonas typographi CA3A Isolate Curculionidae
61 3007478678 Pseudomonas sp. S37 Isolate Curculionidae
62 3300007129 Ant gut microbial communities from Cephalotes atratus, Brazil Metagenome Formicidae
63 3300007150 Drosophila gut microbial communities from New York, USA - Drosophila falleni female 3 gut Metagenome Drosophilidae
64 3300007507 Drosophila gut microbial communities from New York, USA - Drosophila suzukii male 4 gut Metagenome Drosophilidae
65 3300012798 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971M_E6 MG Metagenome
66 3300012803 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971K_E11 MG Metagenome
67 3300012805 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971I_E11 MG Metagenome
68 3300012814 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971K_E6 MG Metagenome
69 2828301124 Sphingomonas leidyi DSM 4733 Isolate Unclassified
70 2864739902 Pseudomonas viridiflavia S00001 Isolate Elmidae
71 2864853652 Pseudomonas rhodesiae S00114 Isolate Elmidae
72 2065487013 Fungus-growing termite worker microbial communities from South Africa - Oerleman's Farm Metagenome
73 2501651205 Colwellia sp. MT41 Isolate Lysianassidae
74 2556921669 Shinella sp. DD12 Isolate Daphniidae
75 3300042625 Termite gut microbial communities of Sphaerotermes sphaerothorax from Ebogo II, Mbalmayo, Cameroon - Sph363 Metagenome Termitidae
76 3300056564 Mealworm larvae gut microbial communities from Newark, Delaware, USA - Gut-D30_PS_oats (Improved Draft) Metagenome Tenebrionidae
77 8021899934 Acinetobacter sp. AR2-3 Isolate Culicidae
78 3300002934 Ant worker gut metagenome for colony PL005 Metagenome Formicidae
79 3300007052 Ant gut microbial communities from Cephalotes eduarduli, Brazil Metagenome Formicidae
80 3300007080 Ant gut microbial communities from Cephalotes clypeatus, Brazil Metagenome Formicidae
81 3300007190 Ant gut microbial communities from Cephalotes umbraculatus, Peru Metagenome Formicidae
82 3300007192 Ant gut microbial communities from Cephalotes persimplex, Brazil Metagenome Formicidae
83 3300010049 Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3 Metagenome Termitidae
84 3300012829 Enriched pill bug-associated microbial communities from UW Madison campus, WI, USA - HID1972I_E11 MG Metagenome Armadillidiidae
85 3300012839 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973M_E11 MG Metagenome Culicidae
86 2864808494 Chitinimonas taiwanensis S00056 Isolate Elmidae
87 2864926767 Pseudomonas nitritireducens S00179 Isolate Elmidae
88 2864934081 Brevundimonas vesicularis S00192 Isolate Elmidae
89 2864993140 Agrobacterium vitis S00303 Isolate Elmidae
90 2528768159 Alteromonadaceae bacterium Bs31 Isolate Unclassified
91 2531839311 Acinetobacter sp. HA Isolate Noctuidae
92 3300042623 Termite gut microbial communities of Dicuspiditermes spinitibialis from Bubeng, China - Xx448 Metagenome Termitidae
93 8035422605 Pseudomonas monteilii CY06 Isolate
94 8067483258 Ochrobactrum soli MTP-C0764 Isolate Muscidae
95 3300007067 Ant gut microbial communities from Cephalotes spinosus, Peru Metagenome Formicidae
96 3300007068 Ant gut microbial communities from Cephalotes simillimus, Peru Metagenome Formicidae
97 3300007139 Ant gut microbial communities from Cephalotes pellans, Brazil Metagenome Formicidae
98 3300009826 Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1 Metagenome Termitidae
99 3300012825 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971K_E1 MG Metagenome
100 3300012845 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973M_E6 MG Metagenome Culicidae
101 2864843793 Acinetobacter johnsonii S00075 Isolate Elmidae
102 2864903489 Pseudomonas aeuginosa S00161 Isolate Elmidae
103 2873468275 Agrobacterium vitis S00131 Isolate Elmidae
104 2032320009 Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine Metagenome Curculionidae
105 2603880173 Pseudomonas SP. Isolate Unclassified
106 2687453755 Pseudomonadales bacterium Cag27 Isolate Unclassified
107 3300042598 Termite gut microbial communities of Furculitermes sp. from Ebogo II, Mbalmayo, Cameroon - Fux382 Metagenome Termitidae
108 3300042649 Termite gut microbial communities of Procubitermes c.f. undulans from Ebogo II, Mbalmayo, Cameroon - Pcu381 Metagenome Termitidae
109 641522603 Acinetobacter baumannii SDF Isolate Pediculidae
110 3300007130 Drosophila gut microbial communities from New York, USA - Drosophila falleni male 4 gut Metagenome Drosophilidae
111 3300012818 Enriched millipede-associated microbial communities from UW Madison campus, WI, USA - HID1971M_E0 MG Metagenome
112 3300012846 Enriched pill bug-associated microbial communities from UW Madison campus, WI, USA - HID1972K_E0 MG Metagenome Armadillidiidae
113 3300012857 Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973K_E0 MG Metagenome Culicidae

🔗 Scaffolds

#ScaffoldSampleTaxonomyLength
1 Ga0466701_047018 3300042598 Bacteria 175250
2 Ga0466701_081489 3300042598 Bacteria 75082
3 Ga0160467_101410 3300012829 Unclassified 9602
4 Ga0160467_104063 3300012829 Unclassified 2204
5 Ga0160472_101423 3300012839 Bacteria 7069
6 Ga0123355_10058534 3300009826 Bacteria 6233
7 Ga0160465_100112 3300012803 Bacteria 75192
8 Ga0160465_100307 3300012803 Unclassified 29939
9 Ga0160442_100187 3300012806 Bacteria 54425
10 DPO_contig06136 2032320009 Unclassified 20854
11 Ga0103266_1001741 3300007067 Bacteria 4464
12 Ga0103265_1004323 3300007068 Bacteria 2020
13 Ga0102735_1002156 3300007080 Bacteria 4977
14 Ga0102737_1005689 3300007142 Unclassified 2451
15 Ga0466724_64093 3300042649 Bacteria 65322
16 Ga0530661_001811 3300056564 Bacteria 9590
17 Ga0466701_019647 3300042598 Bacteria 46781
18 Ga0466701_040552 3300042598 Unclassified 12893
19 Ga0466713_084000 3300042602 Unclassified 3342
20 Ga0160467_100573 3300012829 Bacteria 32217
21 Ga0160445_100613 3300012847 Bacteria 15413
22 Ga0123356_10181226 3300010049 Unclassified 2128
23 Ga0160464_101679 3300012805 Bacteria 6368
24 SPBB_contig11369 2044078006 Bacteria 48467
25 Meta3P_1002420 3300002464 Bacteria 6239
26 Ga0103266_1000068 3300007067 Bacteria 39803
27 Ga0103264_1000309 3300007188 Bacteria 27137
28 Ga0103268_1000064 3300007192 Unclassified 32442
29 Ga0105008_1002063 3300007507 Bacteria 4011
30 Ga0466724_37332 3300042649 Bacteria 112894
31 Ga0466701_020332 3300042598 Bacteria 150390
32 Ga0160455_100005 3300012837 Bacteria 802970
33 Ga0160472_102676 3300012839 Bacteria 3896
34 Ga0160433_100451 3300012846 Bacteria 20808
35 DPO_contig07790 2032320009 Unclassified 66485
36 DPOL_contig01825 2035918003 Bacteria 4155
37 SPBB_contig09583 2044078006 Bacteria 14450
38 FGTW_contig30585 2065487013 Bacteria 15081
39 Ga0103266_1000163 3300007067 Bacteria 25732
40 Ga0103265_1000994 3300007068 Bacteria 6906
41 Ga0102734_1001027 3300007129 Bacteria 7431
42 Ga0466734_133078 3300042623 Bacteria 6165
43 Ga0466724_39553 3300042649 Bacteria 96322
44 Ga0466724_49806 3300042649 Bacteria 82893
45 Ga0160458_100116 3300012832 Unclassified 78264
46 Ga0160435_1000870 3300012857 Bacteria 8316
47 Ga0466701_015194 3300042598 Bacteria 40232
48 Ga0160470_100031 3300012813 Bacteria 226314
49 SPBB_contig01538 2044078006 Bacteria 29469
50 Ga0104042_1000495 3300007130 Unclassified 2523
51 Ga0466730_030919 3300042625 Bacteria 16386
52 Ga0466724_04041 3300042649 Bacteria 91845
53 Ga0466724_19230 3300042649 Unclassified 4879
54 Ga0160432_101816 3300012818 Unclassified 5781
55 Ga0160467_100303 3300012829 Bacteria 56262
56 Ga0160472_101327 3300012839 Bacteria 7571
57 Ga0160447_102625 3300012849 Bacteria 6178
58 Ga0466701_009344 3300042598 Bacteria 27279
59 Ga0123355_10018747 3300009826 Bacteria 10995
60 DPO_contig09151 2032320009 Unclassified 2880
61 SWWA_contig16685__length_3766___numreads_73 2100351016 Bacteria 3766
62 Ga0063521_1001781 3300003973 Bacteria 5540
63 Ga0103264_1002191 3300007188 Bacteria 20234
64 Ga0466724_12272 3300042649 Bacteria 374522
65 Ga0466724_52018 3300042649 Bacteria 48709
66 Ga0160453_100221 3300012814 Unclassified 55478
67 Ga0160467_101797 3300012829 Unclassified 6610
68 Ga0160467_102459 3300012829 Bacteria 4119
69 Ga0160458_100356 3300012832 Bacteria 23569
70 Ga0160460_103365 3300012845 Unclassified 2872
71 Ga0160433_100004 3300012846 Bacteria 543746
72 Ga0160433_100072 3300012846 Bacteria 108277
73 Ga0160447_100005 3300012849 Bacteria 543831
74 Ga0160447_100573 3300012849 Bacteria 16756
75 Ga0123356_10005480 3300010049 Bacteria 12921
76 Ga0160454_100072 3300012798 Bacteria 139416
77 Ga0160454_100383 3300012798 Bacteria 24571
78 Ga0160470_100128 3300012813 Bacteria 78520
79 SWWA_contig31732__length_11538___numreads_684 2100351016 Unclassified 11538
80 CVPL005W_1000577 3300002934 Bacteria 13845
81 Ga0103267_1000201 3300007190 Bacteria 40250
82 Ga0103268_1000036 3300007192 Bacteria 40778
83 Ga0466724_39965 3300042649 Bacteria 13972
84 Ga0160467_101754 3300012829 Unclassified 6896
85 DPOL_contig07569 2035918003 Bacteria 10225
86 DPOL_contig16517 2035918003 Unclassified 11988
87 Ga0102739_1002132 3300007095 Bacteria 3113
88 Ga0466730_012063 3300042625 Bacteria 3815
89 Ga0466709_241557 3300042648 Bacteria 20578
90 Ga0466724_56264 3300042649 Bacteria 82904
91 Ga0466701_056366 3300042598 Bacteria 89649
92 Ga0160468_100001 3300012819 Bacteria 1115787
93 Ga0160468_100586 3300012819 Unclassified 13630
94 Ga0160441_100229 3300012825 Unclassified 55478
95 Ga0160446_100203 3300012835 Bacteria 40875
96 Ga0160447_107698 3300012849 Unclassified 2660
97 Ga0160448_101274 3300012854 Bacteria 8197
98 Ga0466657_020516 3300042582 Bacteria 5550
99 Ga0102736_1000354 3300007052 Bacteria 9692
100 Ga0103260_1003894 3300007139 Unclassified 2332
101 Ga0104019_1003903 3300007150 Bacteria 5804
102 Ga0103267_1000315 3300007190 Bacteria 78827
103 Ga0466734_171290 3300042623 Bacteria 3153
104 Ga0466730_027397 3300042625 Unclassified 3512
105 Ga0466730_037750 3300042625 Bacteria 29585
106 Ga0466730_048244 3300042625 Bacteria 135195
107 Ga0466724_66004 3300042649 Bacteria 70192

🧩 MSA Aligner

🔬 Functional Annotation

PFAM IDNameDescriptionStartEndAccuracy
PF12418 AcylCoA_DH_N Acyl-CoA dehydrogenase N terminal 40 71 0.96
PF12806 Acyl-CoA_dh_C Acetyl-CoA dehydrogenase C-terminal like 505 623 0.94
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 320 489 0.91
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 75 195 0.87
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 200 310 0.83
PF22924 ACOX_C_alpha1 Acyl-CoA oxidase, C-alpha1 domain 330 484 0.71

🌐 Gene Ontology Annotation

PFAMGO TermDescriptionCategory
PF00441 GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors MF

🗺️ Geographic Distribution

Some samples may be missing due to lack of coordinate data.