Sample Metadata
3300009826
General
| Taxon Oid |
3300009826
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Cubitermes and Nasutitermes termite gut microbial communities from Max Planck Institute for Terrestrial Microbiology, Germany |
| Genome Name Sample Name |
Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1 |
| Img Genome Id |
3300009826 |
Project / Publication
| Gold Analysis Project Id |
Ga0123355
|
| Gold Sequencing Project Id |
Gp0141761
|
| Gold Study Id |
Gs0084161
|
| Is Published |
0 |
| Add Date |
06/28/2016 |
| Public Release Date |
08/28/2016 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
Termite gut |
Sampling / Conditions
| Geographic Location |
Petit - Saut dam, French Guiana |
| Isolation Country |
8744 |
| Latitude |
5.0626 |
| Longitude |
-53.0462 |
| Sample Collection Date |
2016/3/17 |
Assembly
| Genome Size Assembled |
4118462945 |
| Gene Count Assembled |
6836016 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected]; [email protected] |
| Alt2 Contact Names |
Andreas Brune; Claire Thompson |
| Assembly Method |
MEGAHIT v. 1.0.6 |
| Award Doi |
10.46936/10.25585/60000866 |
| Contact Email |
[email protected] |
| Contact Name |
Andreas Brune |
| Cultured |
0 |
| Elevation In Meters |
6.000000 |
| Funding Agency |
E; D; O |
| Funding Program |
CSP |
| Funding Year |
2013 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Embiratermes neotenicus |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.11.3 |
| Img Submission Id |
89872 |
| In File |
Yes |
| Isolation |
Termite gut |
| Ncbi Bioproject Accession |
PRJNA365052 |
| Ncbi Biosample Accession |
SAMN06264856 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
Illumina HiSeq 2500-1TB |
| Sequencing Quality |
Level 1: Standard Draft |
| Submission Type |
Primary |
| Submitter Name |
Tijana Glavina del Rio |