Sample Metadata
3300003973
General
| Taxon Oid |
3300003973
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Ips typographus gut microbial communities from Hannover, Germany |
| Genome Name Sample Name |
Ips typographus gut microbial communities from Hannover, Germany - first DNA extraction october 2014, adult beetle |
| Img Genome Id |
3300003973 |
Project / Publication
| Gold Analysis Project Id |
Ga0063521
|
| Gold Sequencing Project Id |
Gp0109785
|
| Gold Study Id |
Gs0113988
|
| Is Published |
0 |
| Add Date |
01/24/2015 |
| Public Release Date |
11/01/2019 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
Ips typographus gut |
Sampling / Conditions
| Geographic Location |
Hannover, Germany |
Assembly
| Genome Size Assembled |
218627726 |
| Gene Count Assembled |
434220 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Wolfgang Streit |
| Assembly Method |
IDBA-UD 1.1 |
| Comments |
released per JGI data release policy |
| Contact Email |
[email protected] |
| Contact Name |
Wolfgang Streit |
| Cultured |
0 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
0 |
| Host Name |
Ips typographus |
| Img Submission Id |
56273 |
| In File |
Yes |
| Isolation |
Ips typographus insect gut |
| Rnd Project |
1 |
| Sample Body Site |
Gastrointestinal tract |
| Sample Body Subsite |
Gut |
| Sequencing Center |
Heinrich-Pette-Institut (HPI) |
| Sequencing Method |
Illumina HiSeq 2500 |
| Submission Type |
Primary |
| Submitter Name |
Wolfgang Streit |