Sample Metadata
2032320009
General
| Taxon Oid |
2032320009
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Mountain Pine Beetle microbial communities from Alberta and British Columbia, Canada |
| Genome Name Sample Name |
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine |
| Img Genome Id |
2032320009 |
Project / Publication
| Gold Analysis Project Id |
Ga0010905
|
| Gold Sequencing Project Id |
Gp0051463
|
| Gold Study Id |
Gs0045522
|
| Pubmed Id |
25406380 |
| Is Published |
1 |
| Add Date |
01/16/2010 |
| Public Release Date |
06/06/2013 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Unclassified |
| Ecosystem Type |
Whole body |
| Specific Ecosystem |
Unclassified |
| Habitat |
Mountain Pine Beetle |
Sampling / Conditions
| Geographic Location |
Grand Prairie, Alberta |
| Isolation Country |
8715 |
| Latitude |
54.7192 |
| Longitude |
-119.664 |
| Sample Collection Date |
2009/6/30 |
Assembly
| Genome Size Assembled |
27077397 |
| Gene Count Assembled |
42570 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Garret Suen |
| Assembly Method |
Newbler v. Unknown |
| Contact Email |
[email protected] |
| Contact Name |
Garret Suen |
| Cultured |
0 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
0 |
| Host Name |
Dendroctonus ponderosae (pine beetle) |
| Img Submission Id |
1028 |
| In File |
Yes |
| Isolation |
Samples were subjected to differential centrifugation and filtered in an attempt to remove eukaryotic component, then isolated with Qiagen Maxi Plant prep |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
454 GS FLX Titanium |
| Submission Type |
Primary |
| Submitter Name |
Susannah Tringe |