Sample Metadata
3300012832
General
| Taxon Oid |
3300012832
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Characterization of biomass-degrading enzymes from insect-associated, soil, and chicken feces microbial communities from the USA and Brazil |
| Genome Name Sample Name |
Enriched mosquito-associated microbial communities from UW Madison campus, WI, USA - HID1973I_E6 MG |
| Img Genome Id |
3300012832 |
Project / Publication
| Gold Analysis Project Id |
Ga0160458
|
| Gold Sequencing Project Id |
Gp0191441
|
| Gold Study Id |
Gs0121620
|
| Is Published |
0 |
| Add Date |
12/16/2016 |
| Public Release Date |
06/14/2017 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Unclassified |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
insecta |
Sampling / Conditions
| Geographic Location |
USA: Madison, Wisconsin |
| Isolation Country |
8855 |
| Latitude |
43.073 |
| Longitude |
-89.4011 |
| Sample Collection Date |
2016/7/30 |
Assembly
| Genome Size Assembled |
84768520 |
| Gene Count Assembled |
126756 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected]; [email protected] |
| Alt2 Contact Names |
Brian Fox; Cameron Currie |
| Assembly Method |
MEGAHIT v. 1.0.6 |
| Award Doi |
10.46936/10.25585/60001100 |
| Contact Email |
[email protected] |
| Contact Name |
Cameron Currie |
| Cultured |
0 |
| Elevation In Meters |
226.000000 |
| Funding Program |
BRC-GLBRC |
| Funding Year |
2016 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Culicidae |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.14.1 |
| Img Submission Id |
108247 |
| In File |
Yes |
| Isolation |
mosquito |
| Ncbi Bioproject Accession |
PRJNA405148 |
| Ncbi Biosample Accession |
SAMN07632497 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
Illumina HiSeq 2500-1TB |
| Sequencing Quality |
Level 1: Standard Draft |
| Submission Type |
Primary |
| Submitter Name |
Tijana Glavina del Rio |