Sample 3300025946

Overview

Basic Information
IMG/M Taxon OID	3300025946 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101372 \| Ga0210126
Sample Name	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	56107505
Sequencing Scaffolds	48
Novel Protein Genes	51
Associated Families	50

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1
All Organisms → cellular organisms → Bacteria	11
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
Not Available	9
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.209766	Long. (^o)	-122.033424	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001574	Metagenome / Metatranscriptome	669	Y
F001902	Metagenome / Metatranscriptome	620	Y
F003627	Metagenome / Metatranscriptome	476	Y
F003800	Metagenome / Metatranscriptome	468	Y
F005789	Metagenome / Metatranscriptome	390	Y
F005915	Metagenome / Metatranscriptome	386	Y
F007858	Metagenome / Metatranscriptome	343	Y
F009467	Metagenome	317	Y
F009534	Metagenome / Metatranscriptome	316	Y
F009579	Metagenome / Metatranscriptome	316	Y
F010359	Metagenome / Metatranscriptome	305	Y
F019205	Metagenome / Metatranscriptome	231	Y
F021023	Metagenome	221	Y
F021592	Metagenome / Metatranscriptome	218	Y
F025733	Metagenome / Metatranscriptome	200	Y
F027057	Metagenome / Metatranscriptome	196	Y
F027322	Metagenome / Metatranscriptome	195	Y
F030180	Metagenome / Metatranscriptome	186	Y
F030487	Metagenome / Metatranscriptome	185	Y
F031074	Metagenome	183	Y
F032662	Metagenome / Metatranscriptome	179	Y
F035361	Metagenome	172	Y
F036137	Metagenome / Metatranscriptome	170	Y
F037096	Metagenome / Metatranscriptome	168	Y
F041843	Metagenome	159	Y
F042887	Metagenome / Metatranscriptome	157	Y
F043121	Metagenome / Metatranscriptome	157	N
F045506	Metagenome / Metatranscriptome	152	Y
F046145	Metagenome	151	Y
F051173	Metagenome / Metatranscriptome	144	Y
F054021	Metagenome / Metatranscriptome	140	Y
F056711	Metagenome / Metatranscriptome	137	Y
F058543	Metagenome	135	N
F061357	Metagenome / Metatranscriptome	132	Y
F064701	Metagenome / Metatranscriptome	128	Y
F070697	Metagenome / Metatranscriptome	123	Y
F072365	Metagenome	121	Y
F083851	Metagenome	112	Y
F085666	Metagenome / Metatranscriptome	111	Y
F085891	Metagenome / Metatranscriptome	111	Y
F091998	Metagenome / Metatranscriptome	107	Y
F095068	Metagenome	105	Y
F098275	Metagenome / Metatranscriptome	104	Y
F098566	Metagenome	103	Y
F100596	Metagenome	102	Y
F100641	Metagenome	102	Y
F101113	Metagenome / Metatranscriptome	102	Y
F101455	Metagenome / Metatranscriptome	102	Y
F103181	Metagenome	101	Y
F105956	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210126_100018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13554	Open in IMG/M
Ga0210126_100055	All Organisms → cellular organisms → Bacteria	9232	Open in IMG/M
Ga0210126_100071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8390	Open in IMG/M
Ga0210126_100109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7017	Open in IMG/M
Ga0210126_100319	All Organisms → cellular organisms → Bacteria	3941	Open in IMG/M
Ga0210126_100372	All Organisms → cellular organisms → Bacteria	3618	Open in IMG/M
Ga0210126_100464	All Organisms → cellular organisms → Bacteria	3202	Open in IMG/M
Ga0210126_100866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2367	Open in IMG/M
Ga0210126_101125	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	2088	Open in IMG/M
Ga0210126_101463	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1845	Open in IMG/M
Ga0210126_101585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1783	Open in IMG/M
Ga0210126_101947	Not Available	1630	Open in IMG/M
Ga0210126_102206	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
Ga0210126_102519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1460	Open in IMG/M
Ga0210126_102713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
Ga0210126_102864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1378	Open in IMG/M
Ga0210126_103293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1303	Open in IMG/M
Ga0210126_104557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1128	Open in IMG/M
Ga0210126_104968	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
Ga0210126_105230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1066	Open in IMG/M
Ga0210126_108471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
Ga0210126_109078	All Organisms → cellular organisms → Bacteria → Nitrospirae	851	Open in IMG/M
Ga0210126_110671	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
Ga0210126_110830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	791	Open in IMG/M
Ga0210126_111140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	783	Open in IMG/M
Ga0210126_112550	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
Ga0210126_113139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	732	Open in IMG/M
Ga0210126_113262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
Ga0210126_113842	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
Ga0210126_114387	Not Available	704	Open in IMG/M
Ga0210126_115659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
Ga0210126_115687	Not Available	681	Open in IMG/M
Ga0210126_117968	Not Available	643	Open in IMG/M
Ga0210126_118919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
Ga0210126_119657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
Ga0210126_120328	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	612	Open in IMG/M
Ga0210126_124087	Not Available	570	Open in IMG/M
Ga0210126_124347	Not Available	567	Open in IMG/M
Ga0210126_124395	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
Ga0210126_125633	Not Available	554	Open in IMG/M
Ga0210126_125733	Not Available	553	Open in IMG/M
Ga0210126_127034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	542	Open in IMG/M
Ga0210126_127311	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
Ga0210126_128746	All Organisms → cellular organisms → Bacteria → Nitrospirae	527	Open in IMG/M
Ga0210126_130479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
Ga0210126_130859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
Ga0210126_131524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
Ga0210126_131702	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0210126_100018	Ga0210126_1000185	F085666	VSERIAGAFPFAIAVVLPPAGLMLGLVELRQDREQGIRLLVVSVLAAVVWALLLVG
Ga0210126_100055	Ga0210126_1000555	F042887	MSEGIDSTPNPWRIRVREHPARRDSSEWRDAIGGAVEAAYPQAPFTSPHLKAARFTVEVTFRMTPLDLARPAVDLDNFVKPVLDTLFTSQNVRRLTGVLLPDVNDTRVFRLLIEKVEVDSPEDEGADITISWDPSTTPALSAP
Ga0210126_100071	Ga0210126_10007112	F098275	MGTHPRKTLLEPGHEAEWERLNAEKSRVLTPAPDTPIGELLRRGQHLSAQAAGLLRAVERAGVDETARS
Ga0210126_100109	Ga0210126_1001093	F019205	MFDTKKTSVPDHLADALDLAIDFATLGEYGLEPVSRPGRPCEGRSRTSTTRSTGAWRSAIDHFATQH
Ga0210126_100319	Ga0210126_1003194	F005789	MATAIALDASPLNVLRSMRGQIVDARIAYPEVLHVEVKDSAGELWHLATQDAEWSPADPAVLVGRSVDDADIDGETGELRCRLSDGSLLDVKPAAREAEDDPPNWELITPGGIVLEFGPGVRWQIGSADSRASARA
Ga0210126_100372	Ga0210126_1003724	F091998	MHPRAEGMKIVSLGRVELPLGEALRLEMVADPGGDDLVHLQYYISTDAGPWALWLSCSRDDLNRREAALRETTPPFVEES
Ga0210126_100464	Ga0210126_1004642	F003627	VDRETARAGISAGLLAGGIAAAVFALSFVAAVLYIAS
Ga0210126_100866	Ga0210126_1008663	F031074	MATAVKRLDLTIGELVEVGGRRYEVVPDRAGGLTLEPPITPVSELEEKWGTKPASAEDFERVAGDFPTDGEG
Ga0210126_101125	Ga0210126_1011256	F037096	MDRAAVDALVYWADAYFLGGFTVGVIVKLLLGRTE
Ga0210126_101463	Ga0210126_1014632	F009467	MKLVHEAVIERSEIFETLRASFFKAFKEKNLCSGVYLFQELTQLSHGITAGWNTEDIVHEALDELLGDILAGKVAFREFP
Ga0210126_101585	Ga0210126_1015852	F027322	VKRPAGITVLAIIFAAAGLSYMMLGFQMTTAVTFGPLPSGQGTWIWGWMLGHVLAILGIIEAVFALLGTGNLSYALASTAFPFIVLWYLNRPSVKKAFGLVEE
Ga0210126_101947	Ga0210126_1019471	F051173	PLVMARIGAGQDKADQRLNPDGSAIPGRAHEQGAAKPKLIEGAYFE
Ga0210126_102206	Ga0210126_1022062	F083851	MTDYAKLLLPRFRYGVIHPRAHEDVQRGPCYQLYRLVPNDFMEISTGLGLENYTKEGVEKAIGNYWTCVERLA
Ga0210126_102519	Ga0210126_1025191	F054021	LALVLPEKVAMARPTGVGRAMATYEIPIEGRDEWLAAARRLA
Ga0210126_102713	Ga0210126_1027132	F001574	VTREALLFSAAYRTSRGAFLKVAPQRKKGQSMPSPRFSTLAFDDLRAGGLFRPAAEKFAGAWLACFLVMTRSDVLRAFSFDHVLRASVCGTIGALVAVALLAQMDRTTNSVVRQVTISSIATFAGDIFAHPSHFPPQWAEPVVTAAVSASIAIALWYAKRWAKSL
Ga0210126_102864	Ga0210126_1028642	F064701	MRAVAGRLAEAAPLPPRAPRGLVDSLQIGVAGVPSGARRTLYYSMRHRTQLYLDEGQYRWLKLRAGEAGSIAAAVRELIDAERARGLDPASDPLLRYLVEEAPARGPKQTSVSTLDRDIY
Ga0210126_103293	Ga0210126_1032931	F091998	HPQAVGSQIVALGRVELRIGEALRLEMVKTDTESDDMVHLQYYVSTESGGWALWLSCPRNDVAALEAPLQALTPPSVG
Ga0210126_104557	Ga0210126_1045572	F009579	MSEVELLLAFLAGVVMGGALDRFVLPLLVDAWIDRLRRHGR
Ga0210126_104557	Ga0210126_1045573	F003800	MGDERREDAADRRRADVYSSARIGAAAALTLVLDVAVPDYDISPGILLPLLGAICALLGLEASAV
Ga0210126_104968	Ga0210126_1049681	F070697	MQLLAGILGRLVFCLGVMVTVVGCVIGSVAGLSTGTTVPGFTLMIAGAAIYWLASTKICLRCNKRVRQAALECKHCGATQK
Ga0210126_105230	Ga0210126_1052302	F025733	MRQIAFSAIRTGILVALAMLLILGLLPAILAVQAAGL
Ga0210126_106601	Ga0210126_1066011	F095068	DMEPKSYRVTFQKPAYQVETRELQAAEDSDLRIELRRGDGIVIEAKDGIFATPLRGLFLRVADGSGAAVFTGSVSLDSDGRGEVPSLRPGTYEVRAESSGYAPISLSGVAVPSRTLSLLLTPGGSLEIQVGPETLALPQPSGRLIGIDGRVYMWSAFTPDGVIRLGGPVRRVDNVAPSRYTLEIEGGVRRDVTITEGGRALVSLP
Ga0210126_108471	Ga0210126_1084712	F007858	VCRALVVLCVADDREALVALKASTVSAEWELAPGAIDLRSTLDQIDADRPHVMVVFGDHIELVGIVRERFPSMRIVTDRDTPGATVVATSLDEVRGLVLGLPRPGGPVGA
Ga0210126_109078	Ga0210126_1090781	F105956	MKPEEPTLVEKLPIYMVAWSLPPCFVILAVIVLALDSFNDAGVAILKGKYMFLLLVGGTLLNLWFYAVRQFKLKRKFSPLHIIASLLFPVAYMSFYYGADTTLVVAICLVGIPLSIVSARQSMNMV
Ga0210126_110671	Ga0210126_1106711	F001902	MANLYHNDRLIIAYASMNQSTKDWSAGAEITWKRDGQRFSHSVGGLGDRFKSSEDAERFVINLAKAWIDSNP
Ga0210126_110830	Ga0210126_1108302	F098566	MSPLPFDLGLSEEDERALRQARRERHVIDGEAALRLIKDASQLVDAAVRRRPLFSGAPLTLPGDQGPFRSGGSEG
Ga0210126_111140	Ga0210126_1111401	F030487	MECGIALLAGNWWAGLLTWVAFAVVVTAAVTFVAARRHPGAGSPPALSFDEVRRLSDRLEELSRRLDSMERPPRD
Ga0210126_112550	Ga0210126_1125501	F100596	MDAAALINEGSRCDHWMFVTPNDDDHFMLFTADNYTGPVQNFFARLKAMRDQERPVQEVKPYDKRKHMPYKGNVRQEDIMAQGTQGLLGERSEQLGTSDRGVIKFRKIVLDAIETALQGGAPKGAAPTDPATGITKLDTAVGVREVNG
Ga0210126_113139	Ga0210126_1131391	F005915	AVWSGQSTVEMFRRHEEARLSWDTLGKAPEVRVPTLILCGADDDVARRGSTPVGTAHRLAELTPDAELFLVPNTKHMTFWDGDGGLRALEEFLLRHPMGTP
Ga0210126_113262	Ga0210126_1132621	F021592	MIRRITGIILGVLAFVLVYWITGLGTPSEPNWALAALIGLVVALIWPWIFGLYAVRRVRQKRQNDIDEEVQKQLA
Ga0210126_113842	Ga0210126_1138421	F101455	LFRGGHYPAVATCARGMLLRALGRNAEAEAALRQVFVLPDKGMPHHIARLALQQP
Ga0210126_113968	Ga0210126_1139682	F100641	LRASAESIAFHYDMAALDDPRAKQATEKTFWDSSLVEEIRRSGFIEQLYKN
Ga0210126_114387	Ga0210126_1143871	F085891	GTPRTPKIFFAGLQILASLISWLAGLIRLTEEEQEDAGIYLDRLGGE
Ga0210126_115659	Ga0210126_1156591	F035361	MGTPYEVADMMIGVRNMIEAADLRRGDQVLLLADTRSDKTTLEALTAGLRFFGAEPMTLVTEPIARYGDVPKAVMEAMHASDVAIWVWPVFITFTPTHRGLGRKREESGSQLHEARMKPYHIY
Ga0210126_115687	Ga0210126_1156872	F030180	MLVPGGIAHRSIGRNDSLRYFCQSHEAVDYVMNEDQYTSQTSFVVKRIGGPNWSAPQEANAPGNRQVMERMHFWDDGPDDQTVVERDYESLVGVAGIGRGKPGSLVRKLRAFDHFTAIVGKGREDAGTQALMESANMRIRTYNMQDEQFAFHRALRSEEVRIQFRGDALDLSEFEMEELS
Ga0210126_117968	Ga0210126_1179681	F056711	GCAKEKSPPQPQPARKASAGTEKRAAPKPHVKWFTGTIEVLDASTGTLTLKGPSGKRRFQVPEKVKEHLAGLEIGDKVIVKHTDEMALSIVKPGANINAQTSQEKEGAVKEMGPVPQAEN
Ga0210126_118919	Ga0210126_1189191	F041843	SPDHRLAYEASLRAFASEAGRNLFLYEERPEAFVPGSVRTRLALLGARLPPGAARSAEKAGALRHLWRMGEPERLRGERQPLRARIAARAEAWRRLRLAAPWNPLRALGPRLHPVVHLADEDARTRAQAAAHLLLPKDRKGRSRAAERFNTRASGSAKRLGGVYHAERFWLVLPSSDGLPEIQHPLEAGGR
Ga0210126_119657	Ga0210126_1196572	F101113	MGVRLRSSRLPRKLWLALGLVVLGGVLLLAQNSTVLVPTMDSYTVVNERTIAMRVAVAPCSWTRVTDVAETPAEVRVKIETLPCPIPLPSTSMLAFRDLTVSLADDLGTRVVRDASGEAVPSRSSVLQPDAHTIHG
Ga0210126_120328	Ga0210126_1203281	F043121	GIVLVVSFFVFKRLYRKWTEKHSYAVYFGEGDDQVNVGADCKTVEIGEHVLDVMIRAKRTVEVESANLRFTADTKHVQHPRSDVEKSVIAIVEAKDLDLSAPQFSSKHDKAGGYDLKYSPASRRVAGDFLRIRIRVKAKQEWEGYLSFCENKASYKHRFRVAKKTTTINSPN
Ga0210126_124087	Ga0210126_1240871	F061357	MADPENLAQRLALLEGVTFSPADLEAIAKEIQDNQRVVAELEEFAKDIAWISHQAQPAGRKA
Ga0210126_124347	Ga0210126_1243471	F072365	MGEQQKECRECGWRGSAAELDETSDASTGKTHVFCPACGGVAIEDLKHDKKDEASES
Ga0210126_124395	Ga0210126_1243952	F036137	MDRASRLQRKLKMAGYLLILGLAVEGITLQWAHATSFLLFIILGGVLVLAGIALYLIAIVTA
Ga0210126_125633	Ga0210126_1256331	F046145	MLQVCLNFYWKLFEWITDRYEKTIPDLLECDHMALKPKPFSEAKTGFFIKSRYLRVLSEK
Ga0210126_125733	Ga0210126_1257332	F058543	EFFQTIESLLGIVKSQCNDIEIRVKDDNSLMIEIIFDGKDQMERIFYNNEFTIIKGTVKSLCKDVIIKVNDSIVSHN
Ga0210126_127034	Ga0210126_1270341	F103181	LLVNQGGGKYQEQRKQPWRTVPMVNTPQGQDEEAGYSAWLDLPLSTREPMTAKDANEARKALRALDTRTTVQRMLGEPPYWRSALAQKDLVD
Ga0210126_127311	Ga0210126_1273112	F021023	KWPPFVCEHSAMNQDKKIPISVVALRADDYSPDGKDVIISLTTKYSTAERKYSVPIQCFYDLILDLQRLNASPAATSIKTSIKPAVAPNPAEDLNQ
Ga0210126_128746	Ga0210126_1287461	F009534	MELLIIIGLVVFVVWLIPTLHNIRRRDQEKTDKKIAFAKWANEQQDPHIVSMVQNLLRENRFKTWEEAAKYVEQTFNKPPPEPHTNVHANDKEGTPS
Ga0210126_130479	Ga0210126_1304792	F027057	TDAEINAIIERLGDKKRPLDEVRDFSFARDAFKELGMK
Ga0210126_130859	Ga0210126_1308592	F045506	MHPWTLYALEVARDRQRDARNQRLVAELRAATPVERRWSLRRPAARVLAGLSRTTAAGVRRLDDCVADDLGRSLAPTK
Ga0210126_131524	Ga0210126_1315241	F032662	LKKDDKNHPLEMQERFIASYRKRGGAIEVHTLDGLPEHRMVPSPSEPETMRFIDIVRGFIAAKG
Ga0210126_131702	Ga0210126_1317021	F010359	MDIQREAARLASVATFFVIVGWFAVIYALIAGVLWWIDLAQREAFNIFEAFAISASAIGGPIFLALLVAAFGH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025946: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences