Metagenome / Metatranscriptome Family F061357

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061357
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	62 residues
Representative Sequence	MNDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISLQAQPAGRKA
Number of Associated Samples	107
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.06 %
% of genes near scaffold ends (potentially truncated)	20.45 %
% of genes from short scaffolds (< 2000 bps)	92.42 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (29.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (31.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01425	Amidase	57.58
PF04909	Amidohydro_2	15.15
PF00296	Bac_luciferase	7.58
PF09084	NMT1	5.30
PF07746	LigA	0.76
PF10518	TAT_signal	0.76
PF00005	ABC_tran	0.76
PF02621	VitK2_biosynth	0.76
PF01075	Glyco_transf_9	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	57.58
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	7.58
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	5.30
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	5.30
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.39 %
Unclassified	root	N/A	8.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	56.82 %
Unclassified	root	N/A	8.33 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	56.82 %
Unclassified	root	N/A	8.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	56.82 %
Unclassified	root	N/A	8.33 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	56.82 %
Unclassified	root	N/A	8.33 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.76 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	56.82 %
Unclassified	root	N/A	8.33 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.76 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0486709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300000953\|JGI11615J12901_11058667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300000956\|JGI10216J12902_104441067	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300001431\|F14TB_107065180	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300004022\|Ga0055432_10164508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300004027\|Ga0055459_10156793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300004074\|Ga0055518_10066665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	804	Open in IMG/M
3300004114\|Ga0062593_100980137	Not Available	864	Open in IMG/M
3300004463\|Ga0063356_101811407	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300004463\|Ga0063356_102055797	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300004463\|Ga0063356_105456252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300004643\|Ga0062591_100059940	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300004643\|Ga0062591_100391947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1143	Open in IMG/M
3300004778\|Ga0062383_10091339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1286	Open in IMG/M
3300004778\|Ga0062383_10282331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300004779\|Ga0062380_10546415	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300004780\|Ga0062378_10086136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300005169\|Ga0066810_10025931	Not Available	1014	Open in IMG/M
3300005183\|Ga0068993_10064132	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005444\|Ga0070694_100277316	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005518\|Ga0070699_100276129	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300005546\|Ga0070696_101441786	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300005829\|Ga0074479_10516519	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300005830\|Ga0074473_10790050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300005836\|Ga0074470_10121760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1010	Open in IMG/M
3300005836\|Ga0074470_10121841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300005836\|Ga0074470_11009184	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300005836\|Ga0074470_11671854	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300006047\|Ga0075024_100823646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300006844\|Ga0075428_102426690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300006845\|Ga0075421_100752868	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300006845\|Ga0075421_100847689	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300006846\|Ga0075430_100844387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	755	Open in IMG/M
3300006872\|Ga0101947_1112688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300009053\|Ga0105095_10704578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300009087\|Ga0105107_10171539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1523	Open in IMG/M
3300009087\|Ga0105107_10527703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	822	Open in IMG/M
3300009091\|Ga0102851_12578393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300009111\|Ga0115026_11870505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300009111\|Ga0115026_11945159	Not Available	502	Open in IMG/M
3300009147\|Ga0114129_10392427	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300009167\|Ga0113563_10288484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1694	Open in IMG/M
3300009609\|Ga0105347_1108287	Not Available	1054	Open in IMG/M
3300009610\|Ga0105340_1383312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300009678\|Ga0105252_10472870	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010037\|Ga0126304_10393960	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300010391\|Ga0136847_11506678	All Organisms → cellular organisms → Bacteria	3725	Open in IMG/M
3300010400\|Ga0134122_10328009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1324	Open in IMG/M
3300010403\|Ga0134123_11161407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	800	Open in IMG/M
3300011410\|Ga0137440_1073830	Not Available	678	Open in IMG/M
3300011419\|Ga0137446_1129770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300011427\|Ga0137448_1168270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300011435\|Ga0137426_1099263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300011437\|Ga0137429_1122935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	797	Open in IMG/M
3300011437\|Ga0137429_1184175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300011439\|Ga0137432_1080845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1002	Open in IMG/M
3300011441\|Ga0137452_1098190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	963	Open in IMG/M
3300011442\|Ga0137437_1007397	All Organisms → cellular organisms → Bacteria	3853	Open in IMG/M
3300012039\|Ga0137421_1121716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	760	Open in IMG/M
3300012040\|Ga0137461_1000631	All Organisms → cellular organisms → Bacteria	7449	Open in IMG/M
3300012041\|Ga0137430_1078860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	916	Open in IMG/M
3300012041\|Ga0137430_1083896	Not Available	890	Open in IMG/M
3300012171\|Ga0137342_1090584	Not Available	651	Open in IMG/M
3300012173\|Ga0137327_1093779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300012232\|Ga0137435_1061507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1108	Open in IMG/M
3300014307\|Ga0075304_1181942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300014870\|Ga0180080_1051067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300014875\|Ga0180083_1013479	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300014880\|Ga0180082_1038212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1006	Open in IMG/M
3300014880\|Ga0180082_1132048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300015258\|Ga0180093_1159044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300015371\|Ga0132258_11581071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1655	Open in IMG/M
3300015374\|Ga0132255_105879430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300017997\|Ga0184610_1092420	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300018031\|Ga0184634_10294280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	745	Open in IMG/M
3300018053\|Ga0184626_10164625	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300018056\|Ga0184623_10133498	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300018063\|Ga0184637_10173729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1326	Open in IMG/M
3300018063\|Ga0184637_10215458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1176	Open in IMG/M
3300018074\|Ga0184640_10090884	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300018078\|Ga0184612_10494222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	599	Open in IMG/M
3300018083\|Ga0184628_10005203	All Organisms → cellular organisms → Bacteria	6213	Open in IMG/M
3300018083\|Ga0184628_10020454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3255	Open in IMG/M
3300018084\|Ga0184629_10153564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1168	Open in IMG/M
3300018084\|Ga0184629_10245089	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300018084\|Ga0184629_10272740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
3300018432\|Ga0190275_10049563	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3498	Open in IMG/M
3300018465\|Ga0190269_11613445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300018466\|Ga0190268_10072892	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018469\|Ga0190270_11121299	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300018476\|Ga0190274_11318241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300018476\|Ga0190274_13737518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300018481\|Ga0190271_10260714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1772	Open in IMG/M
3300020186\|Ga0163153_10265258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300020200\|Ga0194121_10423066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300021081\|Ga0210379_10050547	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300021081\|Ga0210379_10235121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300021859\|Ga0210334_10781934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300022214\|Ga0224505_10040643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1959	Open in IMG/M
3300025324\|Ga0209640_11010854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300025535\|Ga0207423_1080116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300025550\|Ga0210098_1061348	Not Available	621	Open in IMG/M
3300025946\|Ga0210126_124087	Not Available	570	Open in IMG/M
3300026116\|Ga0207674_10272756	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300027735\|Ga0209261_10039907	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300027815\|Ga0209726_10024397	All Organisms → cellular organisms → Bacteria	4967	Open in IMG/M
3300027815\|Ga0209726_10451852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300027831\|Ga0209797_10023208	All Organisms → cellular organisms → Bacteria → Proteobacteria	2833	Open in IMG/M
3300027831\|Ga0209797_10067014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1586	Open in IMG/M
3300027831\|Ga0209797_10143373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1029	Open in IMG/M
3300027877\|Ga0209293_10236405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	909	Open in IMG/M
3300027909\|Ga0209382_10327925	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300027909\|Ga0209382_11096736	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300028802\|Ga0307503_10420147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300028803\|Ga0307281_10070013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1137	Open in IMG/M
3300031538\|Ga0310888_10377842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	827	Open in IMG/M
3300031547\|Ga0310887_10571146	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300031548\|Ga0307408_100297542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1350	Open in IMG/M
3300031716\|Ga0310813_11670391	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300031858\|Ga0310892_10067429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1844	Open in IMG/M
3300031908\|Ga0310900_10216078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1358	Open in IMG/M
3300031965\|Ga0326597_10314036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1777	Open in IMG/M
3300032144\|Ga0315910_10526860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	913	Open in IMG/M
3300032157\|Ga0315912_10084627	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300032157\|Ga0315912_10644630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300032180\|Ga0307471_101309438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
3300033408\|Ga0316605_10181960	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300033413\|Ga0316603_10380968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1270	Open in IMG/M
3300033413\|Ga0316603_11143499	Not Available	737	Open in IMG/M
3300033433\|Ga0326726_10191885	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300033481\|Ga0316600_11102427	Not Available	563	Open in IMG/M
3300034178\|Ga0364934_0254302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.64%
Host-Associated	Host-Associated	10.61%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	57.58%
Terrestrial	Environmental → Terrestrial	31.06%
Plants	Host-Associated → Plants	10.61%
Built Environment	Engineered → Built Environment	0.76%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	33.33%
Soil	Environmental → Terrestrial → Soil	29.55%
Freshwater	Environmental → Aquatic → Freshwater	17.42%
Marine	Environmental → Aquatic → Marine	6.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Peat	Environmental → Terrestrial → Peat	0.76%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%
Unclassified	Engineered → Built Environment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.58%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.79%
Loam	Environmental → Terrestrial → Soil → Loam	3.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.03%
Lake	Environmental → Aquatic → Freshwater → Lake	2.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.76%
Sediment	Environmental → Aquatic → Marine → Sediment	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.58%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.52%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.76%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.76%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.85%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	6.06%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.30%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.27%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.52%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.76%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.76%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Drinking Water Pipes	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Drinking Water Pipes	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004027	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006872	Biofilm microbial communities from drinking water pipes in Singapore	Engineered	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300014307	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025550	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025946	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_04867092	3300000033	Soil	MNDQDYLAHRLALLEGVTITPADLETIAKEIADNLRVVAELEEFAKDTPWISLQTQPAGKKA*
JGI11615J12901_110586672	3300000953	Soil	MNNPEDEIAHRLALLEDVNFSPADLESIANEIADNLRVVAELEEFSKDMAWISHQAQPAGKKV*
JGI10216J12902_1044410672	3300000956	Soil	MNDDDKLAHRLSLLEGVKFSSADLEAISKEILDNQRVAAELEEFAKDTAWISHQAQPARKKD*
F14TB_1070651802	3300001431	Soil	MNDDDKLAHRLSLLEGVKFSSADLDAIAKEILDNQRVAAELEEFAKNTAWISHQAQPARKKD
Ga0055432_101645081	3300004022	Natural And Restored Wetlands	MADPDKLTQRLALLEGGEFSPADLATIANEIEDNQRVVAELEVFANDTPWISHQAQPADRKA*
Ga0055459_101567931	3300004027	Natural And Restored Wetlands	MADPESLAQRLALLEGVTFSPADLEAIATEIDDNLRVVAELEDFAKDTPWISHQAQPAGRKS*
Ga0055518_100666652	3300004074	Natural And Restored Wetlands	MADPESLEQRLALLEGVTFSPADLEAIATEIEDNLRVVVELEDFAKDTPWISHQAQPVGRKS*
Ga0062593_1009801371	3300004114	Soil	MADPENLAQRLALLEGVTFSPTDLEAIAKEIEDNQRVIAELEEFAKETAWISHQAQPAGR
Ga0063356_1018114071	3300004463	Arabidopsis Thaliana Rhizosphere	MNDDDKLAHRLSLLEGVKFSSADLDAISKEILDNQRVAAELEEFAKDTAWISHQAQPARKKD*
Ga0063356_1020557972	3300004463	Arabidopsis Thaliana Rhizosphere	MKDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISLQTQPAGKKA*
Ga0063356_1054562522	3300004463	Arabidopsis Thaliana Rhizosphere	ALRKQESPMNDNEDEIADRLSLLEGVNFSPADLDAIAHEIEDNLRIVAELEEFSKDTAWISHQAQPAGRKA*
Ga0062591_1000599402	3300004643	Soil	MNNHKDEIAHRLALLEDVTFSPADLESIANEIADNLRVVAELEEFSKDMAWISHQAQPAGKKV*
Ga0062591_1003919472	3300004643	Soil	MNDNEDEIADRLSLLEGVNFSPADLDAIAHEIEDNLRIVAELEEFSKDTAWISHQAQPAGRKA*
Ga0062383_100913391	3300004778	Wetland Sediment	MNDQDELTHRLALLQGVEFSATDLEAISHEIVDNLRVVAELEEFGKDIAWISHQAQPANRKA*
Ga0062383_102823312	3300004778	Wetland Sediment	MTNQDELAHRLTLLQGVEFSPADIETISHEIVDNLRVVAELEEFAKDTAWISHQAQPASRKA*
Ga0062380_105464151	3300004779	Wetland Sediment	MADSEKLAHRLALLEGVEFSPADLEAISHEIVDNLRVVAELEEFSNDTAWISHQAQPANRKA*
Ga0062378_100861362	3300004780	Wetland Sediment	MADSEKLAHRLALLEGVEFSPADLEAISHEIVDNLRVVAELEEFGNDTAWISHQAQPANRKA*
Ga0066810_100259311	3300005169	Soil	MADPENLAQRLALLEGVTFSPTDLEAIAKEIEDNQRVIAELEDFAKDTAWIS
Ga0068993_100641322	3300005183	Natural And Restored Wetlands	MNDTDKLSHRLALLDGVDIASAELEAIAKEIEDNLRVVAELEEFAKDTPWISQQAQPAGKQA*
Ga0070694_1002773162	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKDQNNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISQQIQPAGKKA*
Ga0070699_1002761292	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEAFAKDTLWISQQIQPAGKKA*
Ga0070696_1014417862	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SGADGSHKEISMNDQDNFAHRLALLEGVTIAPADLETIAKEIDDNLRVVAELEEFAKDTAWISLQTQPAGKKA*
Ga0074479_105165192	3300005829	Sediment (Intertidal)	MNDNKDEIAHRLSLLEGVTFSPADLEAIAHEIADNLRVVAELEEFSKDTAWISHQAQPAGKKA*
Ga0074473_107900501	3300005830	Sediment (Intertidal)	MADPDKLTQRLALLEGGEFSPTDLAAIANEIEDNQRVVAELEVFANDTPWISHQAQPADRKA*
Ga0074470_101217602	3300005836	Sediment (Intertidal)	MADPENLAQRLARLEGVTFPPTELKAIAEEIEDNQRVIAELEEFAKDTAWISHQAQPAGRKA*
Ga0074470_101218412	3300005836	Sediment (Intertidal)	MADYEKLAPRLALIEGVKFSPADLQTIAHEISENQRIAEELEEFSKDTPWISHQAQPAVRRA*
Ga0074470_110091842	3300005836	Sediment (Intertidal)	MANSDHISHRLALLEGVTFSPDDLDAIAKEIEDNQRVIAELEEFSKDTPWISHQAQPSGRKA*
Ga0074470_116718542	3300005836	Sediment (Intertidal)	MENSDNITRRLTLLEGVNFTAADLDAIGHEIEDNLRVVAELEAFSQDTPWISHQAQPAGRKA*
Ga0075024_1008236462	3300006047	Watersheds	MENNDKLTHRLTLLEGVEFSPADREAIANEIEDNLRVVAELEEFGKDSAWISHQAQPANRKA*
Ga0075428_1024266902	3300006844	Populus Rhizosphere	MKDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0075421_1007528682	3300006845	Populus Rhizosphere	MKDQDNLAHRLVLLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISLQTQPAGKKA*
Ga0075421_1008476892	3300006845	Populus Rhizosphere	MNDADKISHRLALLDGVDIAKAELETIAKEIEDNLRVVAELEEFAQDTPWISQQTQPAGKKA*
Ga0075430_1008443872	3300006846	Populus Rhizosphere	MNDQDNLAHRLALLEGVTIAPADLETIAKEIDDNLRVVAELEEFAKDTPWISLQTQPAGKKA*
Ga0101947_11126882	3300006872	Drinking Water Pipes	MTDKEKLAQRLALLEGVEFTAAELAAIALEIEDNLRIVAELEKFAQATPWISQQAQPAGLKAGS*
Ga0105095_107045782	3300009053	Freshwater Sediment	MAESDNITHRLALLEGVNFSPADLEAIAHEVEDNLRVVAELEEFAQDTAWISHQAQPAGRKA*
Ga0105107_101715392	3300009087	Freshwater Sediment	MAESDNITHRLALLEGVNFSPADLEAIAHEVEDNLRVVAELEEFAKDTAWISHQAQPAGRKA*
Ga0105107_105277031	3300009087	Freshwater Sediment	MADPDKLTQRLALLEGSEFSPADLEAIAKEIEDNQRVVAELEEFAKDTAWISHQAQPADRKA*
Ga0102851_125783931	3300009091	Freshwater Wetlands	MADPDKLAHRLALLEGGAFSPTELEAIANEIEDNLRVVAELEEFANDTAWISHQAQPAGRKA*
Ga0115026_118705051	3300009111	Wetland	ENLAQRLALLEGVTFSPTDLEAIAKEIEDNQRVIAELEEFAKETAWISHQAQPAGRKA*
Ga0115026_119451592	3300009111	Wetland	MADPENLAQRLALLEGVTFSPADLEAIANEIEDNQRVVAELEEFARDTPWISHQAQPAGRKA*
Ga0114129_103924272	3300009147	Populus Rhizosphere	MNDQDNFAHRLALLEGVTIAPADLETIAKEIDDNLRVVAELEEFAKDTPWISLQTQPAGKKA*
Ga0113563_102884842	3300009167	Freshwater Wetlands	MVDPEKLPHRLALLEGGEFSAADLEAIAKEIEDNQRVVAELEEFARDTPWISHQAQPAGRKA*
Ga0105347_11082872	3300009609	Soil	MADPDKLTQRLALLEGGEFSPADLEAIAEEIEDNLRVVAELEEFANDTAWISHQAQPKDRKA*
Ga0105340_13833121	3300009610	Soil	MKDQDNLAHRLALLEGVTIAPADLETIAKEIADNLRVVAELEEFAKETPWISLQTQPAGKKA*
Ga0105252_104728702	3300009678	Soil	MADPDKLAHRLALLEGSAFSPTELEAIANEIEDNLRVVAELEEFANDTAWISHQAQPAGRKA*
Ga0126304_103939602	3300010037	Serpentine Soil	MNDDDKLAHRLSLLEGVKFSSADLDAIAKEILDNQRVAAELEEFAKDTAWISHQAQPARKKD*
Ga0136847_115066782	3300010391	Freshwater Sediment	VFEQCNYKEIDMNDTDKLSHRLALLDGVEIAPADLEAIAKEIADNLRVVAELEEFAKDTPWISQQTQPAGKKA*
Ga0134122_103280092	3300010400	Terrestrial Soil	VFTTALQLAALRKGGPPMNDNEDEITHRLSLLEGVTFSPADLEAIAHEITDNLRVVAELEEFSKDTAWISHQAQPAGKQA*
Ga0134123_111614072	3300010403	Terrestrial Soil	MKDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVAAELEEFAKDTPWISQQIQPAGKKA*
Ga0137440_10738302	3300011410	Soil	MADPDKLTQRLALLEGGEFSPADLEAIAKEIEDNQRVVAELEEFANDTAWISHQAQPAGRKA*
Ga0137446_11297702	3300011419	Soil	MNDSDKLSHRIALLGGVDITPAELEAIAKEIEDNLRVVAELEEFAKDTPWISHQAQPAGKKA*
Ga0137448_11682701	3300011427	Soil	MADPDKLTQRLALLEGREFSPADLEAIAKEIEDNQRVVAELEEFANDTAWISHQAQPADRKT*
Ga0137426_10992631	3300011435	Soil	DPHYKKIRMNDADKLSHRLALLDGVAIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQVQPAGKKA*
Ga0137429_11229352	3300011437	Soil	MNDADKLSHRLTLLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0137429_11841751	3300011437	Soil	NKEFTMADPEKLVQRWALLEGVTFSPAELEAIANEIEDNLRIVAELEEFANDTAWISHQAQPAGRKA*
Ga0137432_10808451	3300011439	Soil	MNDADKLSHRLTLLDGVEIAPADLAAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0137452_10981901	3300011441	Soil	MSDTDQLSHRLALLDGVEIAPADLAAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0137437_10073971	3300011442	Soil	MNDADKLSHRLALLDGVEIAPADLEAIVKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0137421_11217162	3300012039	Soil	MNDADKLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQVQPAGKKA*
Ga0137461_10006315	3300012040	Soil	MNDTDKLSHRLALLEGVEIAPADLEAIVKEIEDNLRVVAELEEFAKDTPWISQQTQPAGKKA*
Ga0137430_10788602	3300012041	Soil	MNDADKLSHRLALLDGVAIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0137430_10838962	3300012041	Soil	MADPEYLAQRLALLEGVTFSPTDLEAITNEIEDNRRVVAELEEFAKETAWISHQAQPAGRKA*
Ga0137342_10905842	3300012171	Soil	MADPDKLTQRLALLEGGEFSPADLEAIAEEIEDNLRVVAELEEFANDTAWISH
Ga0137327_10937791	3300012173	Soil	RLALLDGVEIAPADLEAIAKEIEDNQRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0137435_10615072	3300012232	Soil	MSDTDQLSHRLALLDGVEIAPADLEAIVKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA*
Ga0075304_11819421	3300014307	Natural And Restored Wetlands	TMADPESLEQRLALLEGVTFSPADLEAIATEIDDNLRVVAELEDFAKDTPWISHQAQPAGRKS*
Ga0180080_10510671	3300014870	Soil	GKGYCTMADPDKLTQRLALLEGVEFSPADLAAIANEIEDNQRVVAELEVFANDTAWISHQAQPAGRKA*
Ga0180083_10134792	3300014875	Soil	MADPDKLTQRLALLEGGEFSPADLEAIAKEIEDNQRVVAELEEFANDTAWISHQAQPADRKT*
Ga0180082_10382121	3300014880	Soil	YCTMADPDKLAHRLALLEGGAFSPTELEAIANEIEENLRVVAELEEFANDTAWISHQAQPAGRKA*
Ga0180082_11320481	3300014880	Soil	MADPDKLTQRLALLEGREFSPADLEAIAKEIEDNQRVIAELEEFANDTAWISHQAQPKDRKA*
Ga0180093_11590441	3300015258	Soil	MADPEKLVQRWALLEGVTFSPAELEAIANEIEDNLRVVAELEEFANDTAWISHQAQPAGRKA*
Ga0132258_115810711	3300015371	Arabidopsis Rhizosphere	KRRIDMKDIEHRLALLEGVSFPPAELESITKEIEDNQRIVTELEQFGADTPWISHQAQPGEKKA*
Ga0132255_1058794301	3300015374	Arabidopsis Rhizosphere	LALLEGVAIAPADLETIAKEIANNLRVVAELEEFAKDTPWISQQIQPAGKKA*
Ga0184610_10924202	3300017997	Groundwater Sediment	MKDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISQQIQPAGEKA
Ga0184634_102942802	3300018031	Groundwater Sediment	MNETDKLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISLQTQPAGKKA
Ga0184626_101646252	3300018053	Groundwater Sediment	MNDTDKLSHRLALLDGVDIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISLQTQPAGKKA
Ga0184623_101334982	3300018056	Groundwater Sediment	MNDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISLQAQPAGRKA
Ga0184637_101737291	3300018063	Groundwater Sediment	MNDTDKLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISLQTQPAGKKA
Ga0184637_102154582	3300018063	Groundwater Sediment	MNDTDKLSHRLALLDGVDIAPADLQAIAKEIEDNLRVVAELEEFAKDTPWISQQAQPAGKKA
Ga0184640_100908842	3300018074	Groundwater Sediment	MNDTDKLSHRLALLDGVDIASAELEAIAKEIKDNLRVVAELEEFAKDTPWISQQTQPAGKKA
Ga0184612_104942223	3300018078	Groundwater Sediment	MNDQDNLAHRLALLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKETAWISLQTQPAGK
Ga0184628_100052034	3300018083	Groundwater Sediment	MADPDKLTQRLALLEGGEFSPADLEAIAEEIEDNLRVVAELEEFANDTAWISHQAQPKDRKA
Ga0184628_100204542	3300018083	Groundwater Sediment	MKDQDNLAHRLALLEGVTIAPADLETIAKEIADNLRVVAELEEFAKETPWISLQTQPAGKKA
Ga0184629_101535643	3300018084	Groundwater Sediment	MNDADKLSHRLALLDGVAIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPKGKKA
Ga0184629_102450892	3300018084	Groundwater Sediment	MADPDKLAQRLALLEGVEFSPTDLEAIAKEIQDNQRVVAELEEFANDTAWISHQAQPAGRKA
Ga0184629_102727402	3300018084	Groundwater Sediment	MSDTDQLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA
Ga0190275_100495633	3300018432	Soil	MNNNNEDNMANRLSLLEGVNFSPADLKAITEEIADNQRVVAELEEFVDDTAWISHQAQPTGRKA
Ga0190269_116134451	3300018465	Soil	MNDDDKLAHRLSLLEGVKFSSADLDAIAKEILDNQRVAAELEEFAKDTAWISHQAQPANKKD
Ga0190268_100728922	3300018466	Soil	MNNNEDAIAHRLALLGDVSFPPADLEAIAKEIEDNQRVVAELEEFANDTAWISHQAQPMGRKA
Ga0190270_111212991	3300018469	Soil	MNSNEDEIAHRLSLLEGVSFSPADLEAIAKEIEDNQRVVAELEEFANDTAWISHQAQPRGRKA
Ga0190274_113182412	3300018476	Soil	MNDDDKLAHRLSLLEGVKFSSADLEAISKEILDNQRVAAELEEFAKDTAWISHQAQPARKKD
Ga0190274_137375182	3300018476	Soil	MNDQDKLADRLSLLEPVKFSSADLDAISKEIVDNQRVAAELEEFAKDTAWISHQAQPA
Ga0190271_102607141	3300018481	Soil	MADPDKLTQRLALLEGGEFSPADLEAIAGEIEDNLRVVAELEEFANDTAWISHQAQPKDRKA
Ga0163153_102652581	3300020186	Freshwater Microbial Mat	MADSDNLTQRLALLEGVNFSPTDLAAIANEIEDNLRVVAELEVFANDTPWISHQAQPADRKA
Ga0194121_104230662	3300020200	Freshwater Lake	QRLTLLEGVTISPADLKAIAEEIEDNLRVIAELEEFAKDTPWISLQMQPAGKKA
Ga0210379_100505472	3300021081	Groundwater Sediment	MNDADKLSHRLALLDGVAIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA
Ga0210379_102351212	3300021081	Groundwater Sediment	QRLALLEGSEFSPADLEAIAKEIEDNQRVVAELEEFANDTAWISHQAQPADRKT
Ga0210334_107819341	3300021859	Estuarine	HCTMADPDKLTQRLALLEGGEFSPTDLAAIANEIEDNQRVVAELEVFANDTPWISHQAQPADRKA
Ga0224505_100406431	3300022214	Sediment	MNDQDELAHRLALLQGVEFSPDDLAAISHEIADNLRVVAELEEFAKDTAWISHQAQPAGRKA
Ga0209640_110108542	3300025324	Soil	MNDTDKLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISLQVQPAGKKA
Ga0207423_10801161	3300025535	Natural And Restored Wetlands	MADPDKLTQRLALLEGGEFSPADLATIANEIEDNQRVVAELEVFANDTPWISHQAQPADRKA
Ga0210098_10613482	3300025550	Natural And Restored Wetlands	MADPESLAQRLALLEGVTFSPADLEAIATEIDDNLRVVAELEDFAKDTPWISHQAQPAGRKS
Ga0210126_1240871	3300025946	Natural And Restored Wetlands	MADPENLAQRLALLEGVTFSPADLEAIAKEIQDNQRVVAELEEFAKDIAWISHQAQPAGRKA
Ga0207674_102727562	3300026116	Corn Rhizosphere	MNNHKDEIAHRLALLEDVTFSPADLESIANEIADNLRVVAELEEFSKDMAWISHQAQPAGKKV
Ga0209261_100399072	3300027735	Wetland Sediment	MADSEKLAHRLALLEGVEFSPADLEAISHEIVDNLRVVAELEEFGNDTAWISHQAQPANRKA
Ga0209726_100243973	3300027815	Groundwater	MADPDKLAQKLALLEGVSFSPADLEAIAKEIEDNQRVVAELEEFSNATAWISLQAQPAGRKA
Ga0209726_104518522	3300027815	Groundwater	MNDTDKLSHRLALLDGVEIAPAELEAIAKEIEDNLRVVAELEEFAKDTPWISQQAQPAGKKA
Ga0209797_100232084	3300027831	Wetland Sediment	MTNQDELAHRLTLLQGVEFSPADIETISHEIVDNLRVVAELEEFAKDTAWISHQAQPASRKA
Ga0209797_100670142	3300027831	Wetland Sediment	MNDQDELTHRLALLQGVEFSATDLEAISHEIVDNLRVVAELEEFGKDIAWISHQAQPANRKA
Ga0209797_101433732	3300027831	Wetland Sediment	LLCDESPEAFAMADSEKLAHRLALLEGVEFSPADLEAISHEIVDNLRVVAELEEFGNDTAWISHQAQPANRKA
Ga0209293_102364052	3300027877	Wetland	MADPENLAQRLALLEGVTFSPADLEAIANEIEDNQRVVAELEEFARDTPWISHQAQPAGRKA
Ga0209382_103279252	3300027909	Populus Rhizosphere	MKDQDNLAHRLVLLEGVTIAPADLETIAKEIEDNLRVVAELEEFAKDTPWISLQTQPAGKKA
Ga0209382_110967362	3300027909	Populus Rhizosphere	MNDADKISHRLALLDGVDIAKAELETIAKEIEDNLRVVAELEEFAQDTPWISQQTQPAGKKA
Ga0307503_104201472	3300028802	Soil	MADPEILAQRLELLEGVTFSPTDLEAIAKEIEDNQRVIAELEDFAKDTAWISHQAQPAEKKT
Ga0307281_100700131	3300028803	Soil	MSDTDQLSHRLALLDGVEIPSTDLEAIAKEIEDNLRVVAELEEFAKDTPWISQQLQPAGKKA
Ga0310888_103778422	3300031538	Soil	MNDDDKLAHRLSLLEGVKFSSADLDAISKEILDNQRVAAELEEFAKDTAWISHQAQPARKQD
Ga0310887_105711462	3300031547	Soil	MNDDDKLAHRLSLLEGVKFSSADLDAISKEILDNQRVAAELEEFAKDTAWISHQAQPARKKD
Ga0307408_1002975422	3300031548	Rhizosphere	MNDDDKLAHRLSLLEGVKFSSADLEAIAKEILDNQRVAAELEEFAKDTAWISHQAQPARKKD
Ga0310813_116703912	3300031716	Soil	MNDNKEEIAHRLSLLEGVTFSPADFEAIAHEITDNLRVVAELEEFSKDTAWIS
Ga0310892_100674292	3300031858	Soil	MADPENLAQRLALLEGVTFSPTDLEAIAKEIEDNQRVIAELEEFAKDTAWISHQAQPAGRKA
Ga0310900_102160782	3300031908	Soil	QRLALLEGVTFSPTDLEAIAKEIEDNQRVIAELEEFAKETAWISHQAQPAGRKA
Ga0326597_103140362	3300031965	Soil	IAMQYKEIDMNDTDKLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAKDTPWISQQTQSAGKKA
Ga0315910_105268602	3300032144	Soil	MNNNDNEIVHRLALLEGVNFSSADLETIAHEIADNLRVVAELEEFSKDMAWISHQAQPAGKKA
Ga0315912_100846272	3300032157	Soil	MADPENLAQRLALLEGVIFSPADLEAIAKEIEDNQRVIAELEEFAKDTAWISHQAQPAGRKA
Ga0315912_106446302	3300032157	Soil	MNDHDKLADRLSLLEGVKFSSIDLAAISKEIADNQRVAAELEEFAKDTAWISHQAQPASKKD
Ga0307471_1013094383	3300032180	Hardwood Forest Soil	MNDADKLSHRLALLDGVEIAPADLEAIAKEIEDNLRVVAELEEFAQGTPWISQQTQPAGKKV
Ga0316605_101819602	3300033408	Soil	MADPENLAQRLGLLEGVTFSPADLEAIANEIEDNQRVVAELEEFARDTPWISHQAQPAGRKA
Ga0316603_103809681	3300033413	Soil	MADPENLAQRLALLEGVAFSPADLEAIANEIEDNQRVVAELEEFARDTPWISHQAQPAGRKA
Ga0316603_111434991	3300033413	Soil	MADPDKLAHRLALLEGGAFSPTEIEAIANEIEDNLRVVAELEEFANDTAWISHQAQPAGRKA
Ga0326726_101918852	3300033433	Peat Soil	MVDPEKLPHRLVLLEGGEFSPADLEAIAKEIEDNQRVVAELEEFAKDTAWISHQAQPAEKKT
Ga0316600_111024272	3300033481	Soil	MADPDKLAHRLALLEGGAFSPTELEAIANEIEDNLRVVAELEEFANDTAWISHQA
Ga0364934_0254302_439_627	3300034178	Sediment	MNHTEKLSHRLALLDGVEISPAELEAIAKEIEDNLRVVAELEEFAKDTPWISQQTQPAGKKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061357

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences