Metagenome / Metatranscriptome Family F045506

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045506
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	78 residues
Representative Sequence	MHPWTLYALEVARDRERELQYDWLAAEARAGQTPQPSRLRRPAALVLAALSRGTAAAVRRLDDCVADDLSRSLAATE
Number of Associated Samples	104
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.58 %
% of genes near scaffold ends (potentially truncated)	19.08 %
% of genes from short scaffolds (< 2000 bps)	94.74 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.842 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment (34.210 % of family members)
Environment Ontology (ENVO)	Unclassified (41.447 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (42.763 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.90% β-sheet: 0.00% Coil/Unstructured: 38.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF07336	ABATE	7.89
PF11706	zf-CGNR	7.24
PF00903	Glyoxalase	5.26
PF01641	SelR	2.63
PF01435	Peptidase_M48	1.32
PF10907	DUF2749	0.66
PF13191	AAA_16	0.66
PF13631	Cytochrom_B_N_2	0.66
PF01145	Band_7	0.66
PF12681	Glyoxalase_2	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	7.89
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	2.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.84 %
Unclassified	root	N/A	13.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.84 %
Unclassified	root	N/A	13.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.84 %
Unclassified	root	N/A	13.16 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.79 %
Unclassified	root	N/A	13.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	63.82 %
Unclassified	root	N/A	13.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	39.47 %
Unclassified	root	N/A	13.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	39.47 %
Unclassified	root	N/A	13.16 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	39.47 %
Unclassified	root	N/A	13.16 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.66 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	39.47 %
Unclassified	root	N/A	13.16 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.66 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	39.47 %
Unclassified	root	N/A	13.16 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103523823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	726	Open in IMG/M
3300000956\|JGI10216J12902_122592495	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300004061\|Ga0055487_10043441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300004114\|Ga0062593_101186847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	800	Open in IMG/M
3300004480\|Ga0062592_101688612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	615	Open in IMG/M
3300004480\|Ga0062592_102039049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	568	Open in IMG/M
3300004643\|Ga0062591_102835292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300005093\|Ga0062594_101355918	Not Available	718	Open in IMG/M
3300005168\|Ga0066809_10039208	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005169\|Ga0066810_10059512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300005334\|Ga0068869_100986024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300005347\|Ga0070668_101494296	Not Available	617	Open in IMG/M
3300005353\|Ga0070669_101452579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	596	Open in IMG/M
3300005364\|Ga0070673_100827823	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005456\|Ga0070678_102005636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300005466\|Ga0070685_10111482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1686	Open in IMG/M
3300005578\|Ga0068854_102061839	Not Available	526	Open in IMG/M
3300005842\|Ga0068858_101793572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	606	Open in IMG/M
3300009092\|Ga0105250_10556788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300009148\|Ga0105243_11938721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
3300009157\|Ga0105092_10495855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300009553\|Ga0105249_10032509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4720	Open in IMG/M
3300009789\|Ga0126307_10065346	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300010037\|Ga0126304_10589265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	749	Open in IMG/M
3300010154\|Ga0127503_10249486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1473	Open in IMG/M
3300010154\|Ga0127503_10581209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300010166\|Ga0126306_10492444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	969	Open in IMG/M
3300010397\|Ga0134124_11862266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	637	Open in IMG/M
3300010399\|Ga0134127_13049347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300010860\|Ga0126351_1086400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300010861\|Ga0126349_1262498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300010861\|Ga0126349_1275884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	729	Open in IMG/M
3300010861\|Ga0126349_1306277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300011436\|Ga0137458_1198262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	610	Open in IMG/M
3300011442\|Ga0137437_1242234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	624	Open in IMG/M
3300012212\|Ga0150985_115842359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1303	Open in IMG/M
3300012212\|Ga0150985_117912816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300012469\|Ga0150984_105723189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300012893\|Ga0157284_10049024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	957	Open in IMG/M
3300012909\|Ga0157290_10149085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	747	Open in IMG/M
3300012912\|Ga0157306_10266491	Not Available	612	Open in IMG/M
3300012914\|Ga0157297_10131520	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300012961\|Ga0164302_10963777	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012987\|Ga0164307_10501456	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300013297\|Ga0157378_11189077	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300013308\|Ga0157375_11550216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300014264\|Ga0075308_1149904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300014326\|Ga0157380_10732494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	998	Open in IMG/M
3300015162\|Ga0167653_1011759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1757	Open in IMG/M
3300015190\|Ga0167651_1109653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	507	Open in IMG/M
3300015192\|Ga0167646_1011038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2488	Open in IMG/M
3300015200\|Ga0173480_10127878	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300015371\|Ga0132258_10199996	All Organisms → cellular organisms → Bacteria	4846	Open in IMG/M
3300015371\|Ga0132258_11190164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1927	Open in IMG/M
3300015372\|Ga0132256_100965631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	968	Open in IMG/M
3300015374\|Ga0132255_102411263	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300017787\|Ga0183260_10581107	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300018053\|Ga0184626_10137744	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300018071\|Ga0184618_10301913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	682	Open in IMG/M
3300018072\|Ga0184635_10188367	Not Available	823	Open in IMG/M
3300018072\|Ga0184635_10216711	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300018075\|Ga0184632_10341725	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300018078\|Ga0184612_10091304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1593	Open in IMG/M
3300018081\|Ga0184625_10162977	Not Available	1165	Open in IMG/M
3300018081\|Ga0184625_10274294	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300018081\|Ga0184625_10352347	Not Available	765	Open in IMG/M
3300018084\|Ga0184629_10009366	All Organisms → cellular organisms → Bacteria	3763	Open in IMG/M
3300018469\|Ga0190270_10246529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1550	Open in IMG/M
3300018469\|Ga0190270_12856649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300018476\|Ga0190274_11772966	Not Available	712	Open in IMG/M
3300019208\|Ga0180110_1020452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300019208\|Ga0180110_1068637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300019212\|Ga0180106_1033933	Not Available	612	Open in IMG/M
3300019228\|Ga0180119_1171041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	916	Open in IMG/M
3300019229\|Ga0180116_1069767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	766	Open in IMG/M
3300019229\|Ga0180116_1070805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	595	Open in IMG/M
3300019229\|Ga0180116_1122801	Not Available	566	Open in IMG/M
3300019229\|Ga0180116_1129444	Not Available	820	Open in IMG/M
3300019229\|Ga0180116_1133299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300019229\|Ga0180116_1195730	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300019229\|Ga0180116_1285549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	585	Open in IMG/M
3300019229\|Ga0180116_1313994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300019229\|Ga0180116_1318592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	640	Open in IMG/M
3300019248\|Ga0180117_1007467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300019248\|Ga0180117_1206213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1382	Open in IMG/M
3300019248\|Ga0180117_1294079	Not Available	836	Open in IMG/M
3300019249\|Ga0184648_1023945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300019249\|Ga0184648_1240055	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300019249\|Ga0184648_1475809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	668	Open in IMG/M
3300019254\|Ga0184641_1266994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300019254\|Ga0184641_1280571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300019257\|Ga0180115_1053349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	680	Open in IMG/M
3300019257\|Ga0180115_1147754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300019257\|Ga0180115_1159422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300019257\|Ga0180115_1222624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	774	Open in IMG/M
3300019257\|Ga0180115_1232948	Not Available	838	Open in IMG/M
3300019257\|Ga0180115_1265994	Not Available	513	Open in IMG/M
3300019257\|Ga0180115_1273610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300019263\|Ga0184647_1115337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300019263\|Ga0184647_1370361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	820	Open in IMG/M
3300019263\|Ga0184647_1476942	Not Available	1178	Open in IMG/M
3300019269\|Ga0184644_1102562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300019269\|Ga0184644_1304326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300019269\|Ga0184644_1647019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	745	Open in IMG/M
3300019279\|Ga0184642_1538309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300019279\|Ga0184642_1591770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	706	Open in IMG/M
3300019356\|Ga0173481_10206677	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300019362\|Ga0173479_10102257	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300019867\|Ga0193704_1067345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300020063\|Ga0180118_1195609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300020065\|Ga0180113_1156949	Not Available	602	Open in IMG/M
3300020065\|Ga0180113_1285577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300020065\|Ga0180113_1312642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300020065\|Ga0180113_1347185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300020065\|Ga0180113_1426923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	745	Open in IMG/M
3300020066\|Ga0180108_1027949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300020068\|Ga0184649_1273426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300021081\|Ga0210379_10579924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300021951\|Ga0222624_1036314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	757	Open in IMG/M
3300021951\|Ga0222624_1070816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300021951\|Ga0222624_1115589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	800	Open in IMG/M
3300021951\|Ga0222624_1219526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	691	Open in IMG/M
3300021951\|Ga0222624_1314627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	790	Open in IMG/M
3300022195\|Ga0222625_1094508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300022195\|Ga0222625_1570204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300022898\|Ga0247745_1013435	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300025899\|Ga0207642_10954632	Not Available	551	Open in IMG/M
3300025918\|Ga0207662_11106417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	563	Open in IMG/M
3300025933\|Ga0207706_11576519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300025942\|Ga0207689_11532005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300025946\|Ga0210126_130859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300025961\|Ga0207712_10328436	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300026095\|Ga0207676_12280425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	539	Open in IMG/M
3300027876\|Ga0209974_10178452	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300028754\|Ga0307297_10118101	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300028754\|Ga0307297_10160559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300028768\|Ga0307280_10061114	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300028787\|Ga0307323_10070753	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300028793\|Ga0307299_10056825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1444	Open in IMG/M
3300028802\|Ga0307503_10711036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300028803\|Ga0307281_10000245	All Organisms → cellular organisms → Bacteria	13679	Open in IMG/M
3300028814\|Ga0307302_10480926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300030975\|Ga0099845_1529700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	908	Open in IMG/M
3300030993\|Ga0308190_1078416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	689	Open in IMG/M
3300031226\|Ga0307497_10602329	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031965\|Ga0326597_10747282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1022	Open in IMG/M
3300033407\|Ga0214472_10038789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4860	Open in IMG/M
3300033814\|Ga0364930_0021862	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300033814\|Ga0364930_0138194	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300034115\|Ga0364945_0023163	Not Available	1643	Open in IMG/M
3300034115\|Ga0364945_0100504	Not Available	846	Open in IMG/M
3300034147\|Ga0364925_0380685	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.89%
Host-Associated	Host-Associated	17.11%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	46.05%
Terrestrial	Environmental → Terrestrial	36.84%
Plants	Host-Associated → Plants	17.11%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	36.84%
Soil	Environmental → Terrestrial → Soil	33.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.55%
Sediment	Environmental → Aquatic → Sediment	7.89%
Floodplain	Environmental → Terrestrial → Floodplain	3.29%
Marine	Environmental → Aquatic → Marine	1.32%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	34.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.32%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.32%
Loam	Environmental → Terrestrial → Soil → Loam	1.32%
Ice	Environmental → Aquatic → Freshwater → Ice	0.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.66%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	34.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.95%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.29%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.66%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	34.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.29%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.29%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.29%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.97%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.97%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.32%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.32%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.32%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.32%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.66%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.66%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014264	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025946	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1035238233	3300000956	Soil	MHPWTMYALEVARDRERELSYDWLAAQARAGRTPRPSRLRRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLATAE*
JGI10216J12902_1225924952	3300000956	Soil	MHPWTLYALEVARDRERELQYDWLAAEVRVAQPSKPSRLRRPVALGLAALSRGTAAAVRRLDDCVADDLGRALAPAE*
Ga0055487_100434413	3300004061	Natural And Restored Wetlands	MHPWTLYALEVARDRQRDARNQRLVAELRAATPVERRWSLRRPAARVLAGLSRTTAAGVRRLDDCVADDLGRSLAPTK*
Ga0062593_1011868472	3300004114	Soil	MHPWTLYALEVARDRERELQYDWLAAEVRAGQPPRPSRLRRPVALVLAGLSRGTAAAVRRLDDCVADDLGRALAPAE*
Ga0062592_1016886121	3300004480	Soil	MHPWTLYALEVARDRERELQYDWLAAEVRAGQPPRPSRLRRPVALILAGLSRGTAAAVRRLDDCVADDLGRALAPAE*
Ga0062592_1020390491	3300004480	Soil	MHPWTLYALELSRDRQREADEDRLAAEARVGMPSSPSRVRRPAALLLAALSRGTASAARRLDACVADDLGRALAPAE*
Ga0062591_1028352921	3300004643	Soil	MSGLRIGDEAMHPWTLYALEVMRDRERELQYDWLAAEVRAGQPPRPSRLRRPVALILAGLSRGTAAAVRRLDDCVADDLGRALAPAE*
Ga0062594_1013559182	3300005093	Soil	MHPWTMYALEVARDHERELQYDWLAAQARAGQTQRPSRLPRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATD*
Ga0066809_100392083	3300005168	Soil	MHPWTLYALEVSRDREQEIRNRLLLVEGSDDLTSHPSRLRRPAARVLAALSRGSAAAVRRLDDCIADDLGRALAPSEQ
Ga0066810_100595123	3300005169	Soil	MHPWTLYALEVSRDREQEIRNRLLLVEGSDDLTSHPSRLRRPAARVLAALSRGSAAAVRRLDDCIADDLGRALAPSEQ*
Ga0068869_1009860242	3300005334	Miscanthus Rhizosphere	MIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR*
Ga0070668_1014942962	3300005347	Switchgrass Rhizosphere	MHPWTLYALEVTKDRRRDLDNERLLIEARAAEPKPSRLRRPMAVALAAVSRGTAAAARRLDDCVADDLGRSLAATK*
Ga0070669_1014525791	3300005353	Switchgrass Rhizosphere	LSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR*
Ga0070673_1008278232	3300005364	Switchgrass Rhizosphere	MSKTMIGGHAMHPWTLYALELSRDRQREADLDRLAAEARAGMPSTPSRVRRPAALLLAAFSRGSAAATRRLDECVADELGRA
Ga0070678_1020056361	3300005456	Miscanthus Rhizosphere	MHPWTMYALEVARDHERELQYDWLAAQARAGQTQRPSRLRRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATD*
Ga0070685_101114823	3300005466	Switchgrass Rhizosphere	MHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR*
Ga0068854_1020618391	3300005578	Corn Rhizosphere	YALELSRDRQREADLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR*
Ga0068858_1017935722	3300005842	Switchgrass Rhizosphere	MHPWTLYALEVSRDRDHEIRNRLLLEDAPHDLTGHPSRLRRPVALVLAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ*
Ga0105250_105567883	3300009092	Switchgrass Rhizosphere	VSKTMIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALA
Ga0105243_119387211	3300009148	Miscanthus Rhizosphere	MHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLP
Ga0105092_104958551	3300009157	Freshwater Sediment	MHPLTLYALEVARDREIEVHNDRLIAAFKAGRDARPSRIRRAAALGLAALSRGSAAAVRRLDDCVADDLGRALAPTE*
Ga0105249_100325093	3300009553	Switchgrass Rhizosphere	VSKTMIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR*
Ga0126307_100653465	3300009789	Serpentine Soil	MYALEVARDRERELQYDWLAAEVRAMTPQTPSRLRRPAALLLAALSRGTAAAARRLDECVADDLGRSLAVTE*
Ga0126304_105892652	3300010037	Serpentine Soil	PATSSPTIITADPGSETTMHPWTMYALEVARDRERELQYDWLAAEVRAMTPQTPSRLRRPAALLLAALSRGTAAAARRLDECVADDLGRSLAVTE*
Ga0127503_102494864	3300010154	Soil	MHPWTLYALEVSQDRDREIHNRLLLEEAPDDPSGHPSRVRRSMALLLAAMSRGSAAAVRRLDDCVADDLGRSLAPSK*
Ga0127503_105812092	3300010154	Soil	MHPWTLYALEVSRDREQEIRNRLLLAEAPEDRTSHPSPLRRPAARVLAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ*
Ga0126306_104924443	3300010166	Serpentine Soil	MYALEVARDRERELQYDWLAAEVRALTPQTPSRLRRPAALLLAALSRGTAAAARRLDECVADDLSRSLAVTE*
Ga0134124_118622662	3300010397	Terrestrial Soil	MIGDHAMHPWTLYALELSRDRQREADEDRLAAEARVGMPSSPSRVRRPAALLLAALSRGTASAARRLDACVADDLGRALAPAE*
Ga0134127_130493473	3300010399	Terrestrial Soil	MHPWTMYALEVARDHERELQYDWLAAQARAGQTQRPSRLRRPTALLLAAFSRGTAAAVRRLDECVADDLSRS
Ga0126351_10864002	3300010860	Boreal Forest Soil	MHPWTIYAMEMARDREREARRHQLAAQFRAAQTPQPSRLRRPVAIVFAAFSRGSAVLVRRLDDCVADDLGRALAPTE*
Ga0126349_12624982	3300010861	Boreal Forest Soil	MHSWSIYALEVARDREREARQARFVSEVMSGRPARPSRLRRPAALALAALSRGSAFVVRRLDDCVADDLGRALAPTE*
Ga0126349_12758842	3300010861	Boreal Forest Soil	MHPWMIYALEITRDRELEARRHQLAAQFRAGQTPQPSRLRRPVAMAFAAFSRGSAVLVRRLDDCVADDLGRALAPTE*
Ga0126349_13062772	3300010861	Boreal Forest Soil	MHPWMIYALEITRDREREARKHELAVQARAGAPARPSRLRRPVAVAFAAFSRGSAVLVRRLDDCVADDLGRALAPTE*
Ga0137458_11982621	3300011436	Soil	AAARRPSPLRRNPMSGVESMHPWTFYALEVWRDRERELKLHRLLAQGRLERPSRRSRIRRPAALILAALSRGSAAAVRRLDDCVADDLGRSLAPTK*
Ga0137437_12422342	3300011442	Soil	VSKTMIGDEAMHPWTLYALEVARDRERELQYDRLAAEARAAQPRKPSRLRRPAALLLAALSRGTAAAVRRLDDCVADDLGRALAPAE*
Ga0150985_1158423593	3300012212	Avena Fatua Rhizosphere	MYALEVMRDREREHQYDRLAAEARAGVTAKPSRLRRPVAIGLAALSRGTAAAVRRLDDCVADDLGRALAPAE*
Ga0150985_1179128162	3300012212	Avena Fatua Rhizosphere	MHPWTMYALEVARDRERELQYDWLAAEVRALRPETPSRLRRPAALLLAALSRGTASAARRLDECVADDLSRSLAVTD*
Ga0150984_1057231891	3300012469	Avena Fatua Rhizosphere	MKHSMGDSAMHPWTLYALELARDRDRELNADRLAALARAGIEPTPSRVRRSAAIALAAFSRGTVAAVRRLDECVAEDLGRSLAATE*
Ga0157284_100490243	3300012893	Soil	YALELSRDRQREADQDRLAAEARAGTPSTQSRVRRPAALLLAALSRGSAAATRKLDECVADELGRALAPLR*
Ga0157290_101490853	3300012909	Soil	MYALEVARDHERELRYDWLAAQARAGQTPKPSRLRRPTALVLAAFSRGTAAAVRRLDDCVADDLSRSLAATD*
Ga0157306_102664911	3300012912	Soil	ALEVARDHERELQYDWLAAQARAGQTQRPSRLRRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATD*
Ga0157297_101315201	3300012914	Soil	MIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVAD
Ga0164302_109637773	3300012961	Soil	MHPWTLYALEVSRDRDHEIRNRLLLEGAPDDLTSRPSRLRRPVALALAALNRGSAAAFRRLDDCIA
Ga0164307_105014563	3300012987	Soil	MHPWTLYALEVSRDRDHEIRNRLLLEGAPDDLTSRPSRLRRPVALALAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ*
Ga0157378_111890773	3300013297	Miscanthus Rhizosphere	MHPWPLYALEVSRDRERGIQSRLLLAQAPDDLTSHPSPLRRPIARALAAVSRGSAAAVRRLDDCIADDLGRSLAPSEQ*
Ga0157375_115502162	3300013308	Miscanthus Rhizosphere	VSKTMIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRKLDECVADELGRALAPLR*
Ga0075308_11499041	3300014264	Natural And Restored Wetlands	MHPWTLYALEVARDRQRDARNQRLVAELRAATPVERRWSLRRPAARVLAGLSRTTAAGVRRLDDCVADDLGRSLAP
Ga0157380_107324942	3300014326	Switchgrass Rhizosphere	MSKTMIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR*
Ga0167653_10117592	3300015162	Glacier Forefield Soil	MTLEPIGDLAMHPWTIYALEVAHDREREARKARFVALVEATRASQPSRLRRPAALALAALSRGSAVVVRRLDDCVADDLGRALAPAD*
Ga0167651_11096531	3300015190	Glacier Forefield Soil	HPWMIYALEITRDREREARKHELAVQARAGAPARPSRLRRPVAVAFAAFSRGSAVLVRRLDDCVADDLGRALAPTE*
Ga0167646_10110385	3300015192	Glacier Forefield Soil	MHPWIFYALETARDRDREARQSWLVAEARAARPQRPSPLRRPAALVLAAFSRGSAVVVRRLDDCVADDLGRSLAPAK*
Ga0173480_101278782	3300015200	Soil	MHPWTMYALEVARDRERELQYDWLAAQARAGQTQRPSRLRRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATD*
Ga0132258_101999963	3300015371	Arabidopsis Rhizosphere	MHPWTLYALEVSRDRDHEIRNRLLLEEAPHDLSGHPSRLRRPVALVLAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ*
Ga0132258_111901644	3300015371	Arabidopsis Rhizosphere	MHPWTLYALEVSRDRDHAIHDRLLLADAPDDETGHPSRLRRPAARILAALSRGSAAAVRRLDDCIADDLGRSLAPSK*
Ga0132256_1009656313	3300015372	Arabidopsis Rhizosphere	MHPWTLYALEVSRDRDHEIRNRLLLEEAPHDLTGHPSRLRRPVALVLAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ*
Ga0132255_1024112633	3300015374	Arabidopsis Rhizosphere	MHPWMLYALEVSRDRDHEILNRLLLAEAPDDLTSHPSRLRRPIALLLAALSRGSAAAVRRLDDCIADDLVRSLAPSEQ*
Ga0183260_105811072	3300017787	Polar Desert Sand	MNPWTLYALEVARDRQREAERDRFIAQARAAQPAHPSRVRRPAALVLAALSRGTAAAVRRLDDCVAEDLGRALAPQE
Ga0184626_101377441	3300018053	Groundwater Sediment	MHPWTLYALEVSRDRERETNLHRLMAQGFDVPSRPSRLRRPAALALAALSRGSAAAARRLDDCVAEDLGRSLALTK
Ga0184618_103019132	3300018071	Groundwater Sediment	MSGLRIGDEAMHPWTLYALEVMRDRERELQYDWLAAEVRVAQPPKPSRLRRPVALVLAGLSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0184635_101883671	3300018072	Groundwater Sediment	SMHPWTLYALEMARDRERELQYDWLAAEARAAQTPQPSRLRRPAALLLAAFSRGTAAAVRRLDECVADDLSRSLAATE
Ga0184635_102167111	3300018072	Groundwater Sediment	MHPWTLYALEVARDRERELEYDWLAAEARAAQTPQPSRFRRPAALLLAAFSRGTAAAVRRLDDCVADDLSR
Ga0184632_103417251	3300018075	Groundwater Sediment	MHPWTLYALEIARDRERELQYDWLAAEARAAQTPQPSRLRRPAALLLAAFSRGTAAAVRRLDECVAAD
Ga0184612_100913044	3300018078	Groundwater Sediment	MHPWTLYALEMARDRERELQYDWLAAEARAAQTPQPSRLRRPAALLLAAFSRGTAAAVRRLDECVADDLSRSLAATE
Ga0184625_101629773	3300018081	Groundwater Sediment	MHPWTLYALEIARDRERELQYDWLAAEARAAQTPQPSRLRRPAALLLAAFSRGTAAAVRRLDECVADDLSRSLAATE
Ga0184625_102742941	3300018081	Groundwater Sediment	GSRTITAGNRALIGDRLMHPWTLYALEIAHDRDREARQHRLAVQAREGQPERPSRLRRSAALGLAALSRGSAAAVRRLDDCVADDLGRALATTE
Ga0184625_103523472	3300018081	Groundwater Sediment	MHPWTMYALEVARDRERELEYDWLAAEARAGQTPKPSRLRRPAALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0184629_100093666	3300018084	Groundwater Sediment	MHPWTLYALEVSRDRERETRLHRLLAQEGFDRPNRPSRLRRPAALAFAALSRGSAAAVRRLDDCVAEDLGHALSPTK
Ga0190270_102465294	3300018469	Soil	MHPWTMYALEVARDHERELQYDWLAAQARAGQPQRPSRLRRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATD
Ga0190270_128566491	3300018469	Soil	MHPWTMYALEVARDRERELQYDWLAAQARVGQTPKPSRIRRPAALFLAAFSRGSAAAVRRLDDCVADDLSRSLAATD
Ga0190274_117729662	3300018476	Soil	MHPWTMYALEVARDHERELQYDWLAAQARAGQTQRPSRLRRPTALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATD
Ga0180110_10204522	3300019208	Groundwater Sediment	MHPWTMYALEVARDRERELHYDWLAAQARVEMTQRPSRLRRPTALLLAAFSRGSAAAVRRLDDCVADDLSRSLAATD
Ga0180110_10686372	3300019208	Groundwater Sediment	MHPWTIYALEVTRDREREIDYDRLAAEARLGTNTRPSRLRRRAALLLAAMSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180106_10339332	3300019212	Groundwater Sediment	MHPWILYALEVSKDRERELRLQHLRTVRSAERIDRPSRFRHPAARLLATLSRGSASAVRRLDDRVADDLGRSLSPTK
Ga0180119_11710411	3300019228	Groundwater Sediment	RDRERDLKLRRLIAEGSPAPTDRSSRLRRPAALVFAALSRRSAAAVRRLDDHVAEDLGRSLAPTK
Ga0180116_10697672	3300019229	Groundwater Sediment	MHPWTMYALEVARDRERELRYDWLAAEARAGQTPQPSRLRRPVALLLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180116_10708052	3300019229	Groundwater Sediment	MHPWTMYALEVARDRERDLKLRRLMAEGGPAPTDRSSRLRRPAALVLAALSRRSSAAVRRLDDHVAEDLGRSLSPTK
Ga0180116_11228012	3300019229	Groundwater Sediment	MYPWTVYALAVDRDRERDLKLRRLIAEGGPAPTDRSSRLRRPAALVFAALSRRSAAAVRRLDDHVAEDLGRSLSPTK
Ga0180116_11294442	3300019229	Groundwater Sediment	MHPWTMYALEVARDHEREMEYDWLAAQARAGQTPKPSRFRRPAALFLAAFSRGTAAAVRRLDDCVADDLSRSLAATD
Ga0180116_11332992	3300019229	Groundwater Sediment	MSGVESMHPWTFYALEVWRDRERELKLHRLLAQGRLERPSRRSRIRRPAALILAALSRGSAAAVRRLDDCVADDLGRSLAPTK
Ga0180116_11957303	3300019229	Groundwater Sediment	MIGGEAVHPWTLYALEVARDRERELHYDWLAAEARAGQTPKPSRLRRPVALLLAALSRGAAAAVRRLDDCVADDLGRALAPAE
Ga0180116_12855492	3300019229	Groundwater Sediment	MHPWTFYALEVSRDRDRDREVRRLLAEARLERPSRPSRLRLRRPAALLLAALSRGSAAAVRRLDDCVADDLGRSLSPTK
Ga0180116_13139941	3300019229	Groundwater Sediment	MHPWTIYALEVTRDREREIDYDRLAAEARLGTNTRPSRLRRPAALLLAAMSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180116_13185922	3300019229	Groundwater Sediment	MHPWTLYALEVARDRERDARRRRLLVGLEASGPRNRRWSLRRPAALAFATLSRTSAAVVRQLDDCVADDLGRSLAATK
Ga0180117_10074671	3300019248	Groundwater Sediment	MIGGEAVHPWTLYALEVARDRERELHYDWLAAEARAGQTPKPSRLRRPVALLLAALSRGTAAAVRRLDDCVADDLGR
Ga0180117_12062132	3300019248	Groundwater Sediment	MHPWTMYALEVARDRERELRYDWLAAEARLGQTPKPSRLRRPVAIVLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180117_12940792	3300019248	Groundwater Sediment	VSTTKIGDFAMHPWTMYALEVARDRERELHYDWLAAQARVEMTQRPSRLRRPTALLLAAFSRGSAAAVRRLDDCVADDLSRSLAATD
Ga0184648_10239452	3300019249	Groundwater Sediment	MHPWTMYALEVSRDRERELRYDWLAAQARAGQTPKPSRFRRPAALFLAAFSRGTAAAVRRLDDCVADDLGRALAPSK
Ga0184648_12400553	3300019249	Groundwater Sediment	MSGVESMHPWTFYALEVWRDRERELKLHRLLAQGRLERPSRRSRIRRPAALILAALSRGSASAVRRLDDCVADDLGRSLAPTK
Ga0184648_14758092	3300019249	Groundwater Sediment	MHPWTLYALEVSRDRDRELRLRYLLADAQPDTINHRSRLRRPMARIFAALSRVSAAAVRRLDDCVADDLGRSLSVSK
Ga0184641_12669942	3300019254	Groundwater Sediment	MHPWTLYALEIARDRERELEYDWLAAEARAGQTPQPSRFRRPAALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0184641_12805712	3300019254	Groundwater Sediment	MHPWTLYALEIAHDRAREARNDRLVAQLRDGQPGNPSRIRRSAALGLAALSRGSAAAVRRLDDCVADDLGRALAPTE
Ga0180115_10533492	3300019257	Groundwater Sediment	MSKTMIGDEAMHPWTLYALEVARDRERELQYDRLAAEARAAQPRKPSRLRRPAALLLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180115_11477542	3300019257	Groundwater Sediment	MSGLRIGEEAMHPWTLYALEVARDRERELQYDWLAAEVRAGQTPKPSRLRRPVAIGLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180115_11594222	3300019257	Groundwater Sediment	MHPWTLYALEIARDRERELQYDWLAAEARAGQTSQPSRFRRPAALLLAAFSRGTAAAVRRLDDCVADDLSRSLATTE
Ga0180115_12226242	3300019257	Groundwater Sediment	MHPWTMYALEVARDRERELKLRRLLAQGGAVPTDRPSRLRRPAALVLAALSRRSAAAVRRLDDHVAEDLGRSLSPTK
Ga0180115_12329482	3300019257	Groundwater Sediment	MHPWTLYALEVARDRERELEYDWLAAEARAGQTPKPSRLRRPAALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0180115_12659942	3300019257	Groundwater Sediment	MTIGVVSMHPWTMYALEVARDRERDLKLRRLMAEGGPAPTDRSSRLRRPAALVLAALSRRSAAAVRRLDDHVAEDLGRSLSPTK
Ga0180115_12736102	3300019257	Groundwater Sediment	MIGGEAVHPWTLYALEVARDRERELHYDWLAAEARAGQTPKPSRLRRPVALLLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0184647_11153372	3300019263	Groundwater Sediment	MHPWTLYALELSRDRQREADLDRLAAEARAGMVATPSRLRRPAALVLAALSRGSAAATRRLDECVADELGRSLAPAEG
Ga0184647_13703612	3300019263	Groundwater Sediment	MHPWTLYALEIARDRSREARDQRLLDAQPADLTDHPSRLRRAMALTLAAVSRGSATAVRRLDDCVADDLRQSLALSKE
Ga0184647_14769422	3300019263	Groundwater Sediment	MHPWTMYALEVARDHERELRYDWLAAQARAGRTPKPSRLRRPTALVLAALSRGTAAAVRRLDDCVADDLSRSLAATD
Ga0184644_11025622	3300019269	Groundwater Sediment	MHPWTMYALEVTRDRERELHYDWLAAELRAGQPPRPSRFRRPVALVLAAVSRGSAVVVRRLDDCVADDLGRALSPAK
Ga0184644_13043262	3300019269	Groundwater Sediment	MHPWTMYALEVARDHERELRYDWLAAQARAGQTPKPSRLRRPTALVLAAFSRGTAAAVRRLDDCVADDLSRSLAATD
Ga0184644_16470192	3300019269	Groundwater Sediment	MHPWTLYALEVSRDREREIRNRLLLADAPDDLTSHPSPLRRPVARVLAALSRGSAAAVRRLDDCIADDLGRSLDPSEQ
Ga0184642_15383092	3300019279	Groundwater Sediment	MHPWTLYALEVARDRERELQYDWLAAEARAGQTPQPSRLRRPAALVLAALSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0184642_15917702	3300019279	Groundwater Sediment	MSGLRIGDEAMHPWTLYALEIARDRERELQYDWLAAEARAGLTSKPSRLRRPAALLLAAMSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0173481_102066772	3300019356	Soil	MHPWTMYALEVARDHERELQYDWLAAQARAGQPQRPSRLRRPTALLLAALSRGTAAAVRRLDDCVADDLSRSLAATD
Ga0173479_101022573	3300019362	Soil	MHPWTLYALELSRDRQREADEDRLAAEARVGMPSSPSRVRRPAALLLAALSRGTASAARRLDACVADDLGRALAPAE
Ga0193704_10673452	3300019867	Soil	MSGLRIGDEAMHPWTLYALEVARDRERELQYDWLAAEVRLAQTPKPSRLRRPVALGLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180118_11956092	3300020063	Groundwater Sediment	MHPWTLYALEVTRDRERELQYDWLVAEARAGQTPKTSRLRRPVALILAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180113_11569492	3300020065	Groundwater Sediment	MYPWTVYALAVDRDRERDLKLRRLIAEGSPAPTDRSSRLRRPAALVFAALSRRSAAAVRRLDDHVAEDLGRSLSPTK
Ga0180113_12855772	3300020065	Groundwater Sediment	MIGDEAMHPWTLYALEVARDRERELQYDRLAAEARAAQPRKPSRLRRPAALLLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0180113_13126422	3300020065	Groundwater Sediment	MHPWTMYALEVSRDRERELRIQRFVAEGRAELPSGRSRLRRPVALGLAGLSRLSAAAVRRLDDCVADDLGRSLAATK
Ga0180113_13471852	3300020065	Groundwater Sediment	MSTIRIGEPAMHPWTLYALEISRDRERELQYDWLAAEARAGQTPRPSRFRRPAALLLAAFSRGTAAAVRRLDDCVADDLSRSLATTE
Ga0180113_14269232	3300020065	Groundwater Sediment	MANTPMNGVASMHPFTYYALEVSRDRDRDREVRRLLAEARLDRPSRPSRLRLGRPAALLLAALSRGSAAAVRRLDDCVADDLGRSLSPTK
Ga0180108_10279492	3300020066	Groundwater Sediment	MHPWTMYALEVARDRERDLQYDWLAAQARVETTQRPSRFRRPTALLLAAFSRGSAAAVRRLDDCVADDLSRSLAATD
Ga0184649_12734262	3300020068	Groundwater Sediment	MHPWILYALEVSKDRERELKLQRLLAEGRTERTDRPSRLRRPAARVLAALSRGSAAAVRRLDDCVADDLGRSLSLTK
Ga0210379_105799242	3300021081	Groundwater Sediment	MHPWTMYALEVSRDRERELRIQRFVAEGRAELPSGRSRLRRPVALGLAGLSRLSAAAVRRLDDCVADDLGRSLTATK
Ga0222624_10363142	3300021951	Groundwater Sediment	MHPWTMYALEVARDRERELQYDWLAAEVRALAPESPSRLRRPAALVLAALSRGTAAAARRLDECVADDLSRSLAVTE
Ga0222624_10708161	3300021951	Groundwater Sediment	MHPWTLYALEVARDRERELEYDWLAAEARAVQTPQPSRLRRPAALALAALSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0222624_11155892	3300021951	Groundwater Sediment	MHPWTLYALEVSRDREREIRNRLLLADAPDDLTSHPSPLRRPVARVLAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ
Ga0222624_12195262	3300021951	Groundwater Sediment	MIGGYAMHPWTLYALEVARDRERELLYDRLAAEARVTQTARPSRVRRPVAIGLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0222624_13146272	3300021951	Groundwater Sediment	MHPWTLYALEVARDRERELQYDWLAAEARAGLTPKPSRLRRPVAIGLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0222625_10945082	3300022195	Groundwater Sediment	MHPWTLYALEIAHDHAREARNDRLVAQLRDGQPGRPSRIRRSAALGLAALSRGSAAAVRRLDDCVADDLGRALAPTE
Ga0222625_15702043	3300022195	Groundwater Sediment	MHPWTLYALEVARDRERELEYDWLAAEARAGQTPQPSRLRRPAALVLAAFSRGIAAAVRRLDDCVADDLSRSLAATE
Ga0247745_10134351	3300022898	Soil	MIGDHAMHPWTLYALELSRDRQREADEDRLAAEARVGMPSSPSRVRRPAALLLAALSRGTASAARRLDACVADDLGRALAPAE
Ga0207642_109546322	3300025899	Miscanthus Rhizosphere	MHPWTLYALEVTKDRRRDLDNERLLIEARAAEPKPSRLRRPMAVALAAVSRGTAAAARRLDDCVADDLGRSLAATK
Ga0207662_111064172	3300025918	Switchgrass Rhizosphere	MHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR
Ga0207706_115765192	3300025933	Corn Rhizosphere	WTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR
Ga0207689_115320052	3300025942	Miscanthus Rhizosphere	MSKTMIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR
Ga0210126_1308592	3300025946	Natural And Restored Wetlands	MHPWTLYALEVARDRQRDARNQRLVAELRAATPVERRWSLRRPAARVLAGLSRTTAAGVRRLDDCVADDLGRSLAPTK
Ga0207712_103284361	3300025961	Switchgrass Rhizosphere	SRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR
Ga0207676_122804251	3300026095	Switchgrass Rhizosphere	HAPRRSSSVSKTMIGGHAMHPWTLYALELSRDRQREANLDRLAAEARAGMPSTQSRVRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLPGNVR
Ga0209974_101784523	3300027876	Arabidopsis Thaliana Rhizosphere	MHPWTMYALEVARDHERELRYDWLAAQARAGQTPKPSRLRRPTALVLAAFSRGTAAAVRRLDDCVADDLS
Ga0307297_101181013	3300028754	Soil	MHPWTLYALEVARDRERELQYDWLAAEARAGLTPKPSRLRRPVAIGLAALSRGTAAAVRRLDDCVADDLGRALAPA
Ga0307297_101605592	3300028754	Soil	MHPWTMYALEVARDRERELQYDWLAAEVRALAPETPSRLRRPAALVLAALSRGTAAAARRLDECVADDLSRSLAVTE
Ga0307280_100611143	3300028768	Soil	MHPWTLYALEVARDRERELQYDRLAAEARVTQTARPSRVRRPVAIGLAALSRGTAAAVRRLDDCVADDLGRALAPAE
Ga0307323_100707531	3300028787	Soil	MSGLRIGDEAMHPWTLYALEVARDRERELQYDWLAAEVRLAQTPKPSRLRRPVALGLAALSRGSAAAVRRLDDCVADDLGRALAPAE
Ga0307299_100568252	3300028793	Soil	MHPWTLYALEVARDRERELQYDWLAAEVRLAQTPKPSRLRRPVALGLAALSRGSAAAVRRLDDCVADDLGRALAPAE
Ga0307503_107110362	3300028802	Soil	MHPWTMYALEVSRDRDHEIRNRLLLAEAPDDRSNHPSRLRRPIALVLAALSRGSAAAVRRLDDCIADDLGRSLAPSEQ
Ga0307281_1000024510	3300028803	Soil	MHPWTLYALEVARDRERELQYDWLAAEVRAAQPPKPSRLRRPVALVLAGLSRGTAAAVRRLDDCVADDLGRALAPTE
Ga0307302_104809261	3300028814	Soil	MHPWTLYALEVARDRERELQYDWLAAEARAGQTPQPSRLRRPAALVLAAFSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0099845_15297002	3300030975	Boreal Forest Soil	MNPWIIYALEIARDREREARSHQLAAQFRAGQTPQPSRLRRPVAIAFAAFSRGSAVLVRRLDDCVADDLGRALAPTE
Ga0308190_10784162	3300030993	Soil	MIGGYAMHPWTLYALEVSRDRQREADEDRLAAEARAGMVATPSRLRRPAALLLAALSRGSAAATRRLDECVADELGRALAPLRSNLR
Ga0307497_106023293	3300031226	Soil	MHPWTLYALELSRDRQREADLDRLAAEARAGMPSTPSRVRRPAALLLAALSRGSAAATRRLDECVADEL
Ga0326597_107472822	3300031965	Soil	MHPWTLYALEVSKDRERELKLRRLLAEGRAERTDRPSRLRRPAARVLAALSRGSAAAVRRLDDCVADDLGRSLSLTK
Ga0214472_100387894	3300033407	Soil	MHPWTLYALEVARDREREANNRRLLTALQAADPSSRRWSLRRPAARVFATLSRTSAAVVRRLDGCVAEDLGRSLTATK
Ga0364930_0021862_1440_1673	3300033814	Sediment	MHPWTLYALEVSKDRERELNLRRLLAEGRAERTDRPSRLRRPAARVLAALSRGSAAAVRRLDDCVADDLGRSLSLTK
Ga0364930_0138194_143_373	3300033814	Sediment	MHPWTLYALELANDRERELRRRLLTEGPIERASRPSRLRRPAALILAALSRGSAAAVRRLDDCVADDLGRSLAPTK
Ga0364945_0023163_1249_1482	3300034115	Sediment	MHPWTLYALEVAHDREREARQYRLAADARAGRPAQPSRIRRSAALGLAALSRGSAAAVRRLDDCVADDLGRALAPSE
Ga0364945_0100504_460_693	3300034115	Sediment	MHPWTLYALEVARDRERELQYDWLAAEARAGQTSQPSRFRRPAALLLAAFSRGTAAAVRRLDDCVADDLSRSLAATE
Ga0364925_0380685_164_382	3300034147	Sediment	VYALAVDRDRERDLKLRRLIAEGSPAPTDRSLRLRRPAALVFAALSRRSAAAVRRLDDHVAEDLGRSLSPTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045506

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences