Sample 3300001405

3300001405: Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012

Overview

Basic Information
IMG/M Taxon OID	3300001405 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0084162 \| Gp0056312 \| Ga0003472
Sample Name	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	37411250
Sequencing Scaffolds	52
Novel Protein Genes	54
Associated Families	54

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3
All Organisms → cellular organisms → Bacteria	11
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1
Not Available	13
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	polar biome → polar → peat soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Barrow Environmental Observatory site, Barrow, Alaska
Coordinates	Lat. (^o)	71.2999	Long. (^o)	-156.61	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000443	Metagenome / Metatranscriptome	1132	Y
F000664	Metagenome / Metatranscriptome	950	Y
F000955	Metagenome / Metatranscriptome	822	Y
F001269	Metagenome / Metatranscriptome	734	Y
F002483	Metagenome / Metatranscriptome	555	Y
F003627	Metagenome / Metatranscriptome	476	Y
F004213	Metagenome / Metatranscriptome	448	Y
F004821	Metagenome / Metatranscriptome	422	Y
F005356	Metagenome / Metatranscriptome	403	Y
F005789	Metagenome / Metatranscriptome	390	Y
F005999	Metagenome / Metatranscriptome	384	Y
F007135	Metagenome / Metatranscriptome	357	Y
F007832	Metagenome / Metatranscriptome	344	Y
F009274	Metagenome / Metatranscriptome	320	Y
F009407	Metagenome / Metatranscriptome	318	Y
F011875	Metagenome / Metatranscriptome	286	Y
F013443	Metagenome / Metatranscriptome	271	Y
F016304	Metagenome / Metatranscriptome	248	Y
F017545	Metagenome / Metatranscriptome	240	Y
F018569	Metagenome / Metatranscriptome	234	Y
F021886	Metagenome / Metatranscriptome	217	Y
F027358	Metagenome / Metatranscriptome	195	Y
F027365	Metagenome / Metatranscriptome	195	Y
F031996	Metagenome / Metatranscriptome	181	Y
F032367	Metagenome / Metatranscriptome	180	Y
F032876	Metagenome / Metatranscriptome	179	Y
F033646	Metagenome / Metatranscriptome	177	Y
F033929	Metagenome / Metatranscriptome	176	Y
F036021	Metagenome / Metatranscriptome	171	Y
F037994	Metagenome / Metatranscriptome	167	Y
F038917	Metagenome / Metatranscriptome	165	Y
F045925	Metagenome / Metatranscriptome	152	Y
F047196	Metagenome / Metatranscriptome	150	Y
F054242	Metagenome / Metatranscriptome	140	Y
F054442	Metagenome / Metatranscriptome	140	N
F054448	Metagenome	140	Y
F055924	Metagenome / Metatranscriptome	138	Y
F055944	Metagenome	138	Y
F064160	Metagenome / Metatranscriptome	129	Y
F069061	Metagenome / Metatranscriptome	124	Y
F075458	Metagenome / Metatranscriptome	119	Y
F076455	Metagenome / Metatranscriptome	118	Y
F076660	Metagenome / Metatranscriptome	118	Y
F078948	Metagenome / Metatranscriptome	116	Y
F081569	Metagenome / Metatranscriptome	114	N
F082975	Metagenome / Metatranscriptome	113	N
F087702	Metagenome / Metatranscriptome	110	Y
F089579	Metagenome / Metatranscriptome	109	Y
F092604	Metagenome / Metatranscriptome	107	Y
F098274	Metagenome / Metatranscriptome	104	Y
F098275	Metagenome / Metatranscriptome	104	Y
F099809	Metagenome / Metatranscriptome	103	Y
F102119	Metagenome	102	Y
F104077	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI20186J14852_1000014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	10644	Open in IMG/M
JGI20186J14852_1000026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	9034	Open in IMG/M
JGI20186J14852_1000050	All Organisms → cellular organisms → Bacteria	7523	Open in IMG/M
JGI20186J14852_1000188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4708	Open in IMG/M
JGI20186J14852_1000244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4250	Open in IMG/M
JGI20186J14852_1000280	All Organisms → cellular organisms → Bacteria	4078	Open in IMG/M
JGI20186J14852_1000281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4072	Open in IMG/M
JGI20186J14852_1000320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3784	Open in IMG/M
JGI20186J14852_1000326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3766	Open in IMG/M
JGI20186J14852_1000933	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
JGI20186J14852_1000960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2189	Open in IMG/M
JGI20186J14852_1001011	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
JGI20186J14852_1001207	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1934	Open in IMG/M
JGI20186J14852_1001343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1831	Open in IMG/M
JGI20186J14852_1001398	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
JGI20186J14852_1001884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1452	Open in IMG/M
JGI20186J14852_1002167	Not Available	1320	Open in IMG/M
JGI20186J14852_1002376	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1244	Open in IMG/M
JGI20186J14852_1002447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1223	Open in IMG/M
JGI20186J14852_1002589	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
JGI20186J14852_1002698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1143	Open in IMG/M
JGI20186J14852_1002792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1118	Open in IMG/M
JGI20186J14852_1002935	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
JGI20186J14852_1002987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
JGI20186J14852_1003069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1049	Open in IMG/M
JGI20186J14852_1003187	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
JGI20186J14852_1004613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	806	Open in IMG/M
JGI20186J14852_1004761	Not Available	790	Open in IMG/M
JGI20186J14852_1004792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	786	Open in IMG/M
JGI20186J14852_1004995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	772	Open in IMG/M
JGI20186J14852_1006066	Not Available	693	Open in IMG/M
JGI20186J14852_1006159	Not Available	688	Open in IMG/M
JGI20186J14852_1006264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	682	Open in IMG/M
JGI20186J14852_1007102	Not Available	640	Open in IMG/M
JGI20186J14852_1007541	Not Available	622	Open in IMG/M
JGI20186J14852_1007707	Not Available	616	Open in IMG/M
JGI20186J14852_1008014	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
JGI20186J14852_1008027	Not Available	604	Open in IMG/M
JGI20186J14852_1008294	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
JGI20186J14852_1008355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
JGI20186J14852_1008419	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
JGI20186J14852_1008858	Not Available	577	Open in IMG/M
JGI20186J14852_1009004	Not Available	574	Open in IMG/M
JGI20186J14852_1009193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	568	Open in IMG/M
JGI20186J14852_1009408	Not Available	563	Open in IMG/M
JGI20186J14852_1009657	Not Available	557	Open in IMG/M
JGI20186J14852_1010086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
JGI20186J14852_1010884	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
JGI20186J14852_1011048	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
JGI20186J14852_1012252	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
JGI20186J14852_1012414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
JGI20186J14852_1012482	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI20186J14852_1000014	JGI20186J14852_10000148	F004821	MSKRIQNTTFVSRGRITGLVRDESPAGTGQNRTSRSANRDSVPSAADEALFYRARLILGDALPRPNR*
JGI20186J14852_1000026	JGI20186J14852_10000269	F007832	VLVVLSDIFPGGGGPLADVFAIAIAVALFALLYWAIDLIDRI*
JGI20186J14852_1000050	JGI20186J14852_10000504	F002483	MATRIFRRRGARGRPAPRPVRASSYYLVAGIPLDREMERLRALPAFAAGPLATRAPELKVRRAGRRPNRLGFAVPSEFRLSVTAYPGIRPGDVLETLLHELAHLHVGRAAEAHAWHGRTFKTILARAMEEAYGVVVSPLPSTLHGAYAEAIERLVRTQW*
JGI20186J14852_1000188	JGI20186J14852_10001883	F098275	MPFRFNTLLEPGHEAEWAQLGAEKRRALTPAPDTPVGELLRRGQSLSAQAAGLLRAVERGGGSTRA*
JGI20186J14852_1000244	JGI20186J14852_10002445	F055944	VSRQLLLLLFAFAAGTALAGLLGAVSLGVAFGVGQLCFAATLIWVLLRD*
JGI20186J14852_1000280	JGI20186J14852_10002807	F016304	MRPVLVAFLLVADAFVVAALRIARPEGWWAPFIAFGALLLGLLWFQGWAIGHRHDDD*
JGI20186J14852_1000281	JGI20186J14852_10002811	F099809	HIEKNLADEIFRDLFVPHEPKPETKHPDTVPSVQYLHGKPVALSDSGDQDVVRSRLCRTQWPSRRVGRIEPPAGSTETGKFFSLA*
JGI20186J14852_1000320	JGI20186J14852_10003203	F005789	MASVIALDASPMNVLCSMRGSVVDARLAYPDVLHVEIRDSQGDLWRLATQDADWSPADPAQLIGRTVEDADIDEETGELRCKLSDGSLLDVKPAAREADDDPPNWELSTPGGVVLEFGPGVRWQISSADAPVSSRH*
JGI20186J14852_1000320	JGI20186J14852_10003204	F032367	LTRKRDIKQFRQACKEIGLTARERYEASEALHAEKASGGAREHMTYGELLAWLRQWRG*
JGI20186J14852_1000326	JGI20186J14852_10003262	F047196	MDKTETLGAYEAPRVVDYGDLQELTAACLGGSGGDAGYPGTLPGGYTAGPSNPAAGCHSNP*
JGI20186J14852_1000933	JGI20186J14852_10009332	F009274	MPLWITRRAVPAVWRRIPWKMVWTVVVWLGSKGKERVSENLTQREQSEFWSLLKKSKGRPGALSQRDRTRIKNITGKAIRGS*
JGI20186J14852_1000960	JGI20186J14852_10009602	F069061	MVFDFRHKNISGQWKSSGHRKGDTRDAAFAALEAKVGPLPSGKYMSRPRDGRTKNWDLFTRP*
JGI20186J14852_1001011	JGI20186J14852_10010111	F004213	MRSKQEVRGIVDGFAKSGMTRREYCEKHNIGISTLDYWRRAQKSKPKLVEVAIEAQAMDGFTLVLVNGRRIESSWRFAEAGLTRLIRVAEA*
JGI20186J14852_1001207	JGI20186J14852_10012071	F104077	EVKGNHLYFDVECRQGDKLIGSGIHKRAIVPAAF*
JGI20186J14852_1001343	JGI20186J14852_10013431	F033929	MPRGILSRRSDTEQISWGKFSRFPCTVAGSTLRILDGYGLRGKSPARPTLAPCTRFLSIDSHVCSTLPSDLASRRQPLRSR*
JGI20186J14852_1001398	JGI20186J14852_10013983	F064160	VKFLLVPFAIVAFVLFLLLLGAIGLVVSMAVLSVSGRIWRLVMRR*
JGI20186J14852_1001884	JGI20186J14852_10018842	F003627	MDRETARKNMVGGLVAGGFAAAIFALAFVVAFLYIAQ*
JGI20186J14852_1002167	JGI20186J14852_10021672	F078948	VQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLXLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID*
JGI20186J14852_1002376	JGI20186J14852_10023764	F092604	GFVLVFLGIIIASYQSYSGEVSEQVVEPYRKIGGILLTQFALCLIAVLACLGWLVGGGPDWAYGATVGLFALEVFAVFAAAVWATRMVLWK*
JGI20186J14852_1002447	JGI20186J14852_10024472	F054242	MNPMERADNLPEEFARNLYEQRARMQEADAVILYAHSRTGLLARFLQRMADRMDPTGDARRTQR*
JGI20186J14852_1002589	JGI20186J14852_10025891	F036021	AGDSSCPGPGWCTNGDRACMNVLIWSSSTGQIAIKGANAKHWLLGSIYWPGTCTDTVNGTSTIAGTLSCGSLSISAGAGAATAIGGDYGIATSLVEAILVE*
JGI20186J14852_1002698	JGI20186J14852_10026981	F000443	MQTAGALAAAIAWSKVDVLTPSQRITAEIQIRGRLRDTINDPEPVFHMRNVSAEPLIPGAVALNGVPEGLFSKAFVGGIRTIEPEPPPPDQIMEMIRRYIMFQADTFLVTGAVEFPKATETAMHMEILMKSRFFPVVDATITTFGV
JGI20186J14852_1002792	JGI20186J14852_10027923	F054442	VRRPRRFFLAMHGIKGDDAVRDMEFAEQLLRGGDFVGLFRDIDVRQDETGFDVEGVQHLGRLAVGKIVEASSECLAIDRDDTSRRVGNGAAQTSGVLAENLLDGLGFKALEDVSNRGMGGGAPPVQTEGGVQSAAVHFDEGHDGTIGIAAGDDSKDREQQDMLQLVELTLGPARVGDIAEQA
JGI20186J14852_1002935	JGI20186J14852_10029353	F037994	PTLVAHAPPFVSGTDFTNPVGDQAVVVVYCGTSLNCVGATDALYQSEIDVYVYYGFNDLNLFGGRITISGSSKTTTSW*
JGI20186J14852_1002987	JGI20186J14852_10029873	F076660	MDAQKTYVLWLNRNTKEQAFSGRGARARQVAAHLSAEVRAVGA
JGI20186J14852_1003069	JGI20186J14852_10030692	F102119	MDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAINSANKTFEKSFGNSGLNDIGHTLQNVNREVRRQVTHSFHVTKIHGTNPKKLIRCVQRAEGDVHKIQRCAVKF*
JGI20186J14852_1003187	JGI20186J14852_10031871	F054448	VKRWVRLGLQTAIGVLLLWLWLRTVSLPEVVSHARVHSWPAVVLMVCLFLVTSLIRVRRWLLLLRPLAP
JGI20186J14852_1004613	JGI20186J14852_10046132	F087702	VRWAIRTIRVTGAVKSKLTMLIAIGIALSACGTAPTSASNPDALARGAAVKTLDGGKLDSLPTGPVYIRMIRFAQPAGYVINSKQHVPSVVYVETGVHRLTLNGQPPIDLMAGQAMFHQSVTHTHFNPGPGPSVWYSIAIWPSSARGQPLVDKIAQAAFESDDIVRDGLPQVAYSQVLRQVTLAKAGTPGAHRFGGLSAFYVLSGSVTIKIAHRPSVT
JGI20186J14852_1004761	JGI20186J14852_10047612	F009407	MTEASHTRTKIAALWTILALSALIMVWLFWRFPLITAVATVAILTVLGVSARLARLIDTDMTDVDMSELQRDKQGV*
JGI20186J14852_1004792	JGI20186J14852_10047921	F007135	MRVIVVHHHGIDDAGFIGKAFARRGGEIAMHLFPEDGPL
JGI20186J14852_1004995	JGI20186J14852_10049952	F013443	LITGWLAPDDCPDCGGPLLDTSTSDRFLVLECPGCGYRTRWHLTNSGPDDSEP
JGI20186J14852_1006066	JGI20186J14852_10060662	F038917	MEPNDLPIVCIPLQLPAEAAAELLRFLAHLTETIERHYFGELHRLAQQNRNPGYSPFD
JGI20186J14852_1006159	JGI20186J14852_10061591	F000955	MVLDSERRHMGERARFQETLRKLAMIDEGFVQDQAGLRLGPARTSALDPKTAALLQLGA
JGI20186J14852_1006264	JGI20186J14852_10062641	F076455	VERAAQYRSDSRVWDERATKVIAEARKLPMGERRRAALREAVRLRIAAELNRWLTNK*
JGI20186J14852_1007102	JGI20186J14852_10071022	F027358	YGAYLILDERRGVGAATGWVFSGTDKTVATLKLVLKLYVGFMEKGLSSTDVAFFQRFLIGSHASEMDVPEQRLAARVGAEIAGLPPDFVDSYPARLGAIPAAEVNAAIKRHVHARDLAITMVATAPVMKKLLLSAKLQESAIDVVPYDGY*
JGI20186J14852_1007541	JGI20186J14852_10075411	F075458	QQPAAAPGVVATAILLFAALGFVSWLADGQLRRLLSGLDDEALGQASRTLDELVSRQREQLVAEVKVLADDNRIRATVLAPKFDEATVQDVLEDLRKSSGATLLAVLDASGKVQAVTGAVSLRQVDLSGSAAVKAAFEHPTSDIWTLPDQVQVIGIAAIRSGDQAPALLVKGLALAKSQLATVETAIGVSGAVLIGDRVASSSSQNA
JGI20186J14852_1007707	JGI20186J14852_10077071	F082975	MGLTWRDAVSSCTIVVIVITYAVYLGGTSLLLISSAWATSAVVLVLGIGCAVVASGDLYTRPQPRMGQVFRWIATGFGTIAVIAGLIGLITGSAHALEILVVVTITWLATGIFWHVLTIGSDRSDEPS*
JGI20186J14852_1007926	JGI20186J14852_10079261	F098274	MKSYMLIGCLVFAAVPCACRAAPLNLATLTCGKYENEVLPAAATNPTADSINTVMWLFGYSVAKSGGHVLYPDALAPFGFALDNECKSNPVEALLEALTIVKPEAKNPMDLSTLECASFAARHTEFMRTDSESATTIMMWLFGFSVARSGSHIFDAD
JGI20186J14852_1008014	JGI20186J14852_10080142	F027365	AELIPLLELFTLELSGGGSALSALGTVSTKLQGELARDVRRFLIASQVVGSVPFESRLLRYSEHLDIPPIASLATILAASREYGTGALQGVRALATDLRHAQRRDLITHSRKALNHVLLPAGVGVLLPFLAVVMFPAVTALQHNLQ*
JGI20186J14852_1008027	JGI20186J14852_10080271	F081569	VEKLEPQQLPGLIRDLQAERRTPGPLGRHPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLVVAIVDELEEEDELMAAEASAT*
JGI20186J14852_1008294	JGI20186J14852_10082941	F018569	MAILDEIHQNIRQLAESAGPSVVGIGQRWGVGSGFVLA
JGI20186J14852_1008355	JGI20186J14852_10083552	F089579	AELRAHRETVEDIALFHRAVRPDVTFILGGIHAAERLVDYRRAAPHRHLVICNGMAYGLAQRRRLLGRVRDSVARSARECFLLNCAENDRAYASILRGLEAA*
JGI20186J14852_1008419	JGI20186J14852_10084191	F001269	PELLREAERFTQGSPTGVYAEPDRETRYWHLPEVDWPVADRLVRVVKTVRIENRRRVGVSQKDNRRIKSKTPVAQESANFYATNFELGSISPLFIHQCGRSRWRIDTEVFQTITTDCHLKHPAIHQTTALVVLTMIRFLAYTLSLVFYHRQVRSHARGACETFHEFAKRIAYRFVAVSLNTG*
JGI20186J14852_1008858	JGI20186J14852_10088582	F055924	MEGPLVSDTTELLSGAAPASEDPPIGHPAAASPRSSGRNGGDLSKLLV
JGI20186J14852_1009004	JGI20186J14852_10090041	F031996	VNSAAAFLPKFFVVCSSILLLTGIAQYLVRPRPPKETLAAKIINRSSITALFSVALGVCGLLIGLGVVKMPHFR*
JGI20186J14852_1009193	JGI20186J14852_10091931	F032876	VQPGIVGLRGAITAAWEGDLRAVREDRYDTAAGKEALAFIQRCYSLVSDLRAPIQKAWGLGGHVHVADSANVAGPGPRVSQTRIKLRNHGDLVAVEAFTYADGTSRRNPSLGLDREIKVVGVSPLTFVQELYSATVDFLQVALSLDLALGGSAWLCEQVVAYNFVVAGKWPTLGEVYKRMTRELAIEDS
JGI20186J14852_1009408	JGI20186J14852_10094081	F005356	MSASPVTMEELELESAELLPNRETLCCGGSYHPGNSFTQVGYGNTAQSGLVNVSALNGSFDNILSLGSGNIL*
JGI20186J14852_1009657	JGI20186J14852_10096571	F017545	MKNSQRAGSQDDRAGTGWVRRWWTGDKLSVRLSEVAFVLVLTGALAWMEWFASPVQAATWSAVVASIAVAGGVASAK
JGI20186J14852_1010086	JGI20186J14852_10100861	F021886	MSWETIRNLVRDEWLILSLLLAWSMAGLAVICERFYALWNVIPKSEAFKNRVIDALEHGDLGKAAALAEMSQVPLADVFERGLQIFQKTPNKTTEAVTSQRSATV
JGI20186J14852_1010884	JGI20186J14852_10108842	F045925	VSEPEDLELEGLQRQLDDAFETTRPRAGFEDELWTRMQARRPAVTRLRDAWMGLLQGIREVPAVPLAAVAAVLVVVLGAGVLVY
JGI20186J14852_1011048	JGI20186J14852_10110481	F011875	CNINYNTFNILNPHQCFAQSRTAGCETPDDETAPQCFQSCPPTASTPQENAAMGLEYPPYTGGDVANENYCVVSPNPGDINAPCTTAKVTPGAVQFYFPNNQCMDQNGGGYTHVFSGEQYNWIIIYAPPSSACGTNKLNGNAFTQYIGTIYTPASGWDILGTDKAPLAGQVICYT
JGI20186J14852_1012252	JGI20186J14852_10122522	F005999	MMRLLRPPHIGIFPRSFRLHGTHHAREMIVEICSMWDALATAIITRTGS*
JGI20186J14852_1012414	JGI20186J14852_10124141	F033646	SVYIKAMDETAATRSGPQPPTTPFVSGIPAARMFGSLRSQGSLLRHALPFYVSSWWRRGDLSWVMYLNAFVLLLVAATSLFGQLPGPAGQVAQRLAGGTALQAGLLLPLFFMSFALLESIKSSIGIWWEKAQGSLEVLLYTPVDDPSLIWLEVLPGAVVSTVWVTLW
JGI20186J14852_1012482	JGI20186J14852_10124821	F000664	MADNSMTGTFQLNLPKDLLSEAKRAPKAKTEQLRVEGWRNSWLSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001405: Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences