Metagenome / Metatranscriptome Family F081569

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081569
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	105 residues
Representative Sequence	VEKLEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDDSETWRTAPSE
Number of Associated Samples	91
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.54 %
% of genes near scaffold ends (potentially truncated)	40.35 %
% of genes from short scaffolds (< 2000 bps)	82.46 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.140 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.544 % of family members)
Environment Ontology (ENVO)	Unclassified (24.561 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.754 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.05% β-sheet: 0.00% Coil/Unstructured: 40.95%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF11154	DUF2934	35.96
PF02801	Ketoacyl-synt_C	11.40
PF00557	Peptidase_M24	7.89
PF08482	HrpB_C	2.63
PF05195	AMP_N	1.75
PF00550	PP-binding	0.88
PF00698	Acyl_transf_1	0.88
PF13561	adh_short_C2	0.88
PF05977	MFS_3	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1643	HrpA-like RNA helicase	Translation, ribosomal structure and biogenesis [J]	2.63
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	1.75
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.14 %
Unclassified	root	N/A	43.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.14 %
Unclassified	root	N/A	43.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.14 %
Unclassified	root	N/A	43.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	6.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.26 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	5.26 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	21.93 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	5.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	6.14 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	5.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.75 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	5.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.75 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.88 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	5.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	1.75 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.88 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.86 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	5.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1.75 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.88 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001405\|JGI20186J14852_1008027	Not Available	604	Open in IMG/M
3300002568\|C688J35102_118482426	Not Available	564	Open in IMG/M
3300004081\|Ga0063454_100697606	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	764	Open in IMG/M
3300004153\|Ga0063455_100530580	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	743	Open in IMG/M
3300005436\|Ga0070713_100627727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1022	Open in IMG/M
3300005437\|Ga0070710_10521186	Not Available	817	Open in IMG/M
3300005533\|Ga0070734_10000881	All Organisms → cellular organisms → Bacteria → Proteobacteria	51341	Open in IMG/M
3300005538\|Ga0070731_10943166	Not Available	571	Open in IMG/M
3300005541\|Ga0070733_10111262	Not Available	1755	Open in IMG/M
3300005602\|Ga0070762_10049268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	2317	Open in IMG/M
3300005602\|Ga0070762_10870670	Not Available	613	Open in IMG/M
3300005602\|Ga0070762_11231341	Not Available	518	Open in IMG/M
3300005614\|Ga0068856_101629334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	658	Open in IMG/M
3300005614\|Ga0068856_101808746	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005712\|Ga0070764_10083604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1683	Open in IMG/M
3300005841\|Ga0068863_101056713	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005944\|Ga0066788_10017415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300005994\|Ga0066789_10000055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	30587	Open in IMG/M
3300006176\|Ga0070765_101003999	Not Available	789	Open in IMG/M
3300006638\|Ga0075522_10003331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11748	Open in IMG/M
3300009093\|Ga0105240_12588774	Not Available	524	Open in IMG/M
3300009551\|Ga0105238_11125284	Not Available	808	Open in IMG/M
3300010152\|Ga0126318_10487388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	767	Open in IMG/M
3300010371\|Ga0134125_10048977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4705	Open in IMG/M
3300010371\|Ga0134125_10201282	All Organisms → cellular organisms → Bacteria → Proteobacteria	2216	Open in IMG/M
3300010396\|Ga0134126_12124225	Not Available	613	Open in IMG/M
3300010397\|Ga0134124_10120624	Not Available	2307	Open in IMG/M
3300010399\|Ga0134127_13583085	Not Available	509	Open in IMG/M
3300010865\|Ga0126346_1081055	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	930	Open in IMG/M
3300012212\|Ga0150985_101973751	Not Available	887	Open in IMG/M
3300012212\|Ga0150985_113931979	Not Available	531	Open in IMG/M
3300012469\|Ga0150984_121340100	Not Available	584	Open in IMG/M
3300012982\|Ga0168317_1034531	Not Available	1355	Open in IMG/M
3300013052\|Ga0154014_156844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	579	Open in IMG/M
3300013307\|Ga0157372_11099829	Not Available	919	Open in IMG/M
3300014968\|Ga0157379_10673282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	970	Open in IMG/M
3300017937\|Ga0187809_10321264	Not Available	575	Open in IMG/M
3300017973\|Ga0187780_10552057	Not Available	825	Open in IMG/M
3300020021\|Ga0193726_1105041	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300020069\|Ga0197907_10821301	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	655	Open in IMG/M
3300020069\|Ga0197907_10996906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	579	Open in IMG/M
3300020070\|Ga0206356_10651418	Not Available	904	Open in IMG/M
3300020070\|Ga0206356_10954343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	813	Open in IMG/M
3300020070\|Ga0206356_11576569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	784	Open in IMG/M
3300020075\|Ga0206349_1376878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	651	Open in IMG/M
3300020076\|Ga0206355_1428936	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300020077\|Ga0206351_10022774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	783	Open in IMG/M
3300020078\|Ga0206352_10040238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	2562	Open in IMG/M
3300020078\|Ga0206352_10965393	Not Available	505	Open in IMG/M
3300020078\|Ga0206352_10995637	Not Available	678	Open in IMG/M
3300020078\|Ga0206352_11067927	Not Available	908	Open in IMG/M
3300020081\|Ga0206354_10190467	Not Available	582	Open in IMG/M
3300020082\|Ga0206353_11094640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	895	Open in IMG/M
3300020582\|Ga0210395_10661243	Not Available	783	Open in IMG/M
3300020582\|Ga0210395_11003649	Not Available	618	Open in IMG/M
3300020610\|Ga0154015_1165238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	829	Open in IMG/M
3300021181\|Ga0210388_10040650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3855	Open in IMG/M
3300021181\|Ga0210388_10093918	All Organisms → cellular organisms → Bacteria	2561	Open in IMG/M
3300021181\|Ga0210388_10388724	Not Available	1227	Open in IMG/M
3300021402\|Ga0210385_10011050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5518	Open in IMG/M
3300021403\|Ga0210397_10165918	All Organisms → cellular organisms → Bacteria → Proteobacteria	1555	Open in IMG/M
3300021403\|Ga0210397_10495855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	924	Open in IMG/M
3300021403\|Ga0210397_10523584	Not Available	900	Open in IMG/M
3300021404\|Ga0210389_10051414	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3161	Open in IMG/M
3300021405\|Ga0210387_10041159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3686	Open in IMG/M
3300021405\|Ga0210387_10159995	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300021475\|Ga0210392_10135289	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1667	Open in IMG/M
3300022467\|Ga0224712_10460396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	611	Open in IMG/M
3300022512\|Ga0242676_1023776	Not Available	653	Open in IMG/M
3300022529\|Ga0242668_1032126	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300022718\|Ga0242675_1056905	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300022718\|Ga0242675_1122577	Not Available	521	Open in IMG/M
3300022720\|Ga0242672_1015437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	992	Open in IMG/M
3300025504\|Ga0208356_1002037	All Organisms → cellular organisms → Bacteria	4862	Open in IMG/M
3300025504\|Ga0208356_1058188	Not Available	761	Open in IMG/M
3300025505\|Ga0207929_1008665	All Organisms → cellular organisms → Bacteria → Proteobacteria	1948	Open in IMG/M
3300025625\|Ga0208219_1011328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2866	Open in IMG/M
3300025627\|Ga0208220_1026195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1834	Open in IMG/M
3300025898\|Ga0207692_10189270	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300026088\|Ga0207641_10673171	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1018	Open in IMG/M
3300026281\|Ga0209863_10001303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	9885	Open in IMG/M
3300026291\|Ga0209890_10000112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	37007	Open in IMG/M
3300027826\|Ga0209060_10020906	All Organisms → cellular organisms → Bacteria	3433	Open in IMG/M
3300027867\|Ga0209167_10128192	Not Available	1318	Open in IMG/M
3300027869\|Ga0209579_10602534	Not Available	596	Open in IMG/M
3300027884\|Ga0209275_10175606	Not Available	1147	Open in IMG/M
3300027884\|Ga0209275_10205694	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300028563\|Ga0265319_1101218	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300028577\|Ga0265318_10035490	Not Available	1917	Open in IMG/M
3300028800\|Ga0265338_10251151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1305	Open in IMG/M
3300028906\|Ga0308309_10452347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300029990\|Ga0311336_10696088	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	871	Open in IMG/M
3300030114\|Ga0311333_10713726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	837	Open in IMG/M
3300030673\|Ga0302287_10234989	Not Available	537	Open in IMG/M
3300030943\|Ga0311366_10235428	Not Available	1584	Open in IMG/M
3300031057\|Ga0170834_113851620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	751	Open in IMG/M
3300031122\|Ga0170822_15611917	Not Available	576	Open in IMG/M
3300031128\|Ga0170823_14567606	Not Available	582	Open in IMG/M
3300031231\|Ga0170824_105943232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1019	Open in IMG/M
3300031231\|Ga0170824_110982998	Not Available	564	Open in IMG/M
3300031241\|Ga0265325_10110837	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300031241\|Ga0265325_10389395	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031247\|Ga0265340_10140749	Not Available	1103	Open in IMG/M
3300031521\|Ga0311364_11138810	Not Available	776	Open in IMG/M
3300031595\|Ga0265313_10038618	All Organisms → cellular organisms → Bacteria → Proteobacteria	2376	Open in IMG/M
3300031595\|Ga0265313_10424963	Not Available	519	Open in IMG/M
3300031805\|Ga0318497_10444448	Not Available	726	Open in IMG/M
3300031918\|Ga0311367_10042874	All Organisms → cellular organisms → Bacteria	4891	Open in IMG/M
3300031938\|Ga0308175_102097036	Not Available	634	Open in IMG/M
3300031996\|Ga0308176_10631808	Not Available	1104	Open in IMG/M
3300032060\|Ga0318505_10200149	Not Available	935	Open in IMG/M
3300032770\|Ga0335085_10913442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	956	Open in IMG/M
3300032896\|Ga0335075_10582247	Not Available	1114	Open in IMG/M
3300034130\|Ga0370494_054480	Not Available	1011	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.58%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.40%
Peat	Environmental → Terrestrial → Peat	5.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Geologic	Environmental → Terrestrial → Geologic	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.14%
Loam	Environmental → Terrestrial → Soil → Loam	12.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.88%
Mine	Environmental → Terrestrial → Geologic → Mine	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.02%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.51%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	14.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	7.02%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.14%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.26%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.88%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001405	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013052	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030673	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_4	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20186J14852_10080271	3300001405	Arctic Peat Soil	VEKLEPQQLPGLIRDLQAERRTPGPLGRHPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLVVAIVDELEEEDELMAAEASAT*
C688J35102_1184824261	3300002568	Soil	VEKFQPQKLPGLIRDLRAELRRPDRGPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWRTAPIE*
Ga0063454_1006976061	3300004081	Soil	PVEKFQPQKLPGLIRDLRAELRRPDRCPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWRTAPIE*
Ga0063455_1005305801	3300004153	Soil	AVSSLVARFQEVPVEKFQPQKLPGLIRDLRAELRRPDRGPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWRTAPIE*
Ga0070713_1006277272	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VISGLVGKFQEVPVEKLQPPKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLTRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE*
Ga0070710_105211861	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VEKLQPPKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE*
Ga0070734_1000088153	3300005533	Surface Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTLTRPRDLATGLVVAIADELEEESEMLDDGSEWQHSPIE*
Ga0070731_109431662	3300005538	Surface Soil	LAVAGLVGKFQEVPVEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDSSETWRTAPVE*
Ga0070733_101112623	3300005541	Surface Soil	VEKFEPQKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMRDDDDLETWRSAPIE*
Ga0070762_100492683	3300005602	Soil	VEKLDPQTLPGLIRDLQAELRAPPAARSRPLTQRHEIARQRIEAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVVAIVDELQDEDDLLAAEIAAAT*
Ga0070762_108706702	3300005602	Soil	VKAPGEPLAIAGLVGKFEEVPVEKLEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDDSETWRTAPSE*
Ga0070762_112313411	3300005602	Soil	VEKFQPQKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMRDDDDLETWRSA
Ga0068856_1016293341	3300005614	Corn Rhizosphere	DLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE*
Ga0068856_1018087462	3300005614	Corn Rhizosphere	FWEVVTPPQPKKLAKLIQDLRTEMRRVQHRGELYELARRRIEAPQEIVDWAKSDRRWSFTLAEVMTSDAHLPYELAIGLVVAIADELEEESELLTDNSETIAESPIGSN*
Ga0070764_100836042	3300005712	Soil	VEKLDPQTLPGLIRDLQAELRAPPAARSRPLTQRHEIARQRIEAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVIAIVDELQDEDDLLAAEIAAAT*
Ga0068863_1010567132	3300005841	Switchgrass Rhizosphere	VEKFQPQKLPGLIRDLRAELRRPDRCPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWRTAPIE*
Ga0066788_100174152	3300005944	Soil	VEKLEPQQLPGLIRDLQAERRAPGPPGRRPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLLVAIVDELEEEDELLAAEASAT*
Ga0066789_100000557	3300005994	Soil	VEKLQPQTLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKFDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLEDDDLETWRSARIE*
Ga0070765_1010039992	3300006176	Soil	VEKLEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDDSETWRTAPSE*
Ga0075522_100033312	3300006638	Arctic Peat Soil	VEKLDPQSLPGLIRDLQAELRARPAARLRPLTQRHEIARQRIAAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVVAIVDELQDEDDLLAAEITAAT*
Ga0105240_125887741	3300009093	Corn Rhizosphere	RVSPLRSRASLASFKEVPVEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE*
Ga0105238_111252841	3300009551	Corn Rhizosphere	VEKFQPQKLPGLIRDLRAELRRPDRCPRAQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTPSQPRDLATGLVVAIADELEEEREMLGNDDLETWSSAPIE*
Ga0126318_104873881	3300010152	Soil	QPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT*
Ga0134125_100489772	3300010371	Terrestrial Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMFDDDGSETWRRTPAE*
Ga0134125_102012822	3300010371	Terrestrial Soil	LASFKEVPVEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE*
Ga0134126_121242251	3300010396	Terrestrial Soil	VEKFQPQKLPGLIRDLRAELRRPDRCPRAQLYELARRRIEARHEILDWAKSDRRWSFTLAEIMTGTPSRPRDLATGLVVAIADE
Ga0134124_101206244	3300010397	Terrestrial Soil	VEKFQPQKLPGLIRDLRAELRRPDRCPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWSTAPIE*
Ga0134127_135830851	3300010399	Terrestrial Soil	QPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMFDDDGSETWRRTPAE*
Ga0126346_10810551	3300010865	Boreal Forest Soil	WICGPLVLVRFDLVCTLRGGPVEKLESQRLSGLIRDLQAELRSPGPPGRRPQVQRHEMAQRRIEAPLEILDWAMRDRRWSFTLAEIMTGAVVRPRELAARLVLAIVDELDEEDELLAAEAGATT*
Ga0150985_1019737512	3300012212	Avena Fatua Rhizosphere	VEKFQPQKLPGLIRDLRAELRRPDRCPRAQLYELARRRIEAPHEILDWAKTDRRWSFTLAEIMTGTSSRPRDLATGLVVAIADELEEESEMLHDDDLETWRSAPIE*
Ga0150985_1139319792	3300012212	Avena Fatua Rhizosphere	VEKFQPQKLPGLIRDLRAELRRPDRGPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDD
Ga0150984_1213401001	3300012469	Avena Fatua Rhizosphere	VEKFQPQKLPGLIRELRAELRRPDRCPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWRTAPIE*
Ga0168317_10345312	3300012982	Weathered Mine Tailings	VTPPQRKKLATLIQDLRAARRLAHGAADLYELARSRIEAPHEILEWAKGDRRWSFTLAEVMTNDTPHPHELAIGLVVAIADELEDESEIFADRSETFATDATRSN*
Ga0154014_1568441	3300013052	Corn, Switchgrass And Miscanthus Rhizosphere	QPKKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT*
Ga0157372_110998292	3300013307	Corn Rhizosphere	VISGPVGKFQEVPVEKLQPPKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREML
Ga0157379_106732823	3300014968	Switchgrass Rhizosphere	GLIRDLRAELRRPDRCPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWSTAPIE*
Ga0187809_103212641	3300017937	Freshwater Sediment	VISGLVGKFQEVPVEKLQPPKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLTRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE
Ga0187780_105520571	3300017973	Tropical Peatland	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKTDRRWSFTLAEIMTGTLSRPRDVATGLVVAIADELEEESEMLDDSSETWRGVPIE
Ga0193726_11050411	3300020021	Soil	VEKLESQNLPGLIRDLQAELRAPVLPGRRTPTRHEMAHRRIEAPLEILDWAMRDRRWSFTLAEIMAGAVARPRELAARLIVAIVDELEE
Ga0197907_108213012	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	TQPNKLARLIQDLRREMRRARGRGDLYDLARSRIEAPHEILDWAKTDRRWSFTLAEVMASEVSRPHDLAAGLVLAIADELEEESETLPDNSETLSAAANE
Ga0197907_109969061	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	KSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE
Ga0206356_106514182	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VEKLQPPKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE
Ga0206356_109543431	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	LSPLRSRASLASFKEVPVEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE
Ga0206356_115765693	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	QPKKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT
Ga0206349_13768781	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	SPQPKKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT
Ga0206355_14289361	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	KKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT
Ga0206351_100227741	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	SPQPKKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMSAT
Ga0206352_100402385	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VTSPQPKKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT
Ga0206352_109653932	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	QPNKLARLIQDLRREMRRARGRGDLYDLARSRIEAPHEILDWAKTDRRWSFTLAEVMAGEVSRPHDLAAGLVLAIADELEEESETLPDNLETLSVAANE
Ga0206352_109956371	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE
Ga0206352_110679272	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VEKLQPPKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE
Ga0206354_101904671	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LRSRASLASFKEVPVEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE
Ga0206353_110946401	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	SPQPKKLAKLIQDLRAARRRSRTAADLYDLARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDADHPHELATGLVVAIADELEEEREMLADDSETFATGAIEPN
Ga0210395_106612432	3300020582	Soil	VEKLQPHKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDDDLETLRSAPIE
Ga0210395_110036492	3300020582	Soil	VEKLQPHKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKCDRRWSFTLAEIMTGSLSRPRDLATGLVVAIADELEEEREMLDDDGLETFR
Ga0154015_11652381	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	QLAFPNFWEVVTSPQPKKLAKLIQDLRVARRRSRTAADLYEIARRRIEAPHEILEWAKGDRRWSFTLAEVMNNDVRPHELATGLVVAIADELEEESEILADDPETRPMPAT
Ga0210388_100406504	3300021181	Soil	VEKLQPHKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKCDRRWSFTLAEIMTGSLSRPRDLATGLVVAIADELEEEREMLDDDGLETFRSAPIE
Ga0210388_100939183	3300021181	Soil	VEKFQPQKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMFGDDDLETLRSAPIE
Ga0210388_103887242	3300021181	Soil	VEKFEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMRDADDLETWRSAPIE
Ga0210385_100110503	3300021402	Soil	VEKLDPQTLPGLIRDLQAELRAPPAARSRPLTQRHEIARQRIEAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVIAIVDELQDEDDLLAAEIAAAT
Ga0210397_101659183	3300021403	Soil	VEKFQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTIARPHELATGLVVAIADELEEESELLADGSETWRSAPVE
Ga0210397_104958551	3300021403	Soil	PGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMRDDDDLETWRSAPIE
Ga0210397_105235842	3300021403	Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSETWRGTPAE
Ga0210389_100514143	3300021404	Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKCDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDDDLETLRSAPIE
Ga0210387_100411593	3300021405	Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDDDLETLRSAPIE
Ga0210387_101599951	3300021405	Soil	VEKLQPQKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMFDDDDLETWRSAPIE
Ga0210392_101352893	3300021475	Soil	VDKFEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDADDLETWRSAPIE
Ga0224712_104603962	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEVMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSEAWRGTPAE
Ga0242676_10237761	3300022512	Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMRDDDDLETWRSAPIE
Ga0242668_10321261	3300022529	Soil	QPHKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDDDLETLRSAPIE
Ga0242675_10569051	3300022718	Soil	PQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTIARPHELATGLVVAIADELEEESELLADGSETWRSAPVE
Ga0242675_11225771	3300022718	Soil	LRSRASLASFEEVPVEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMFDDGSETWRGTPAE
Ga0242672_10154371	3300022720	Soil	LAAWSPVTRFLEVPVDKFEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDADDLETWRSAPIE
Ga0208356_10020373	3300025504	Arctic Peat Soil	VEKLEPQQLPGLIRDLQAERRTPGPLGRHPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLVVAIVDELEEEDELMAAEASAT
Ga0208356_10581882	3300025504	Arctic Peat Soil	MSLPRAPTQSRLSESEGEPLVAWGLVARFWGVPVEKLQPQELPGLIRDLRAELRRPDRGPHAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESELKENDVRDDDDPET
Ga0207929_10086652	3300025505	Arctic Peat Soil	VEKPEPQQLTGLIRDLQAERRTPGPFGRQPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLIVAIVDELEEEDELLSAEASAT
Ga0208219_10113281	3300025625	Arctic Peat Soil	VEKLEPQQLPGLIRDLQAERRTPGPLGRHPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLVVAIVDELE
Ga0208220_10261953	3300025627	Arctic Peat Soil	VEKLDPQSLPGLIRDLQAELRARPAARLRPLTQRHEIARQRIAAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVVAIVDELQDEDDLLAAEITAAT
Ga0207692_101892701	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ARLIQDLRREMRRSQGRGDCRGELYDLARSRIEAPHEILDWAKSDRRWSFTLAEVMASEVSRPHDLAAGLVLAIADELEEESETLPDNSEIMTAVVNE
Ga0207641_106731712	3300026088	Switchgrass Rhizosphere	VEKFQPQKLPGLIRDLRAELRRPDRCPRSQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAMADELEEESEMLDDDDLETWRTAPIE
Ga0209863_100013036	3300026281	Prmafrost Soil	VEKLEPQQLPGLIRDLQAERRAPGPPGRRPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLLVAIVDELEEEDELLAAEASAT
Ga0209890_100001124	3300026291	Soil	VEKLQPQTLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKFDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLEDDDLETWRSARIE
Ga0209060_100209063	3300027826	Surface Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTLTRPRDLATGLVVAIADELEEESEMLDDGSEWQHSPIE
Ga0209167_101281922	3300027867	Surface Soil	VEKFEPQKLPGLIRDLRAELRRPDRGPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMRDDDDLETWRSAPIE
Ga0209579_106025342	3300027869	Surface Soil	RPVKALGEPLAVAGLVGKFQEVPVEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDSSETWRTAPVE
Ga0209275_101756062	3300027884	Soil	VEKLEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDDSETWRTAPSE
Ga0209275_102056942	3300027884	Soil	VEKLDPQTLPGLIRDLQAELRAPPAARSRPLTQRHEIARQRIEAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVVAIVDELQDEDDLLAAEIAAAT
Ga0265319_11012181	3300028563	Rhizosphere	VEKLEPQQLPGLIRDLQAERRTPGPPGRRPQTQMHEMARRRIEAPLEILDWAMRDRRWSFTLAEIMAGTVGRPRELAARLLVAIVDELEEEDELLAAEASAT
Ga0265318_100354902	3300028577	Rhizosphere	VEKFEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLARPRDLATGLVVAIADELEEESEMLDDDDLETWRSAPIE
Ga0265338_102511513	3300028800	Rhizosphere	VEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTVARPHELATGLVVAIADELEEESELLADSSETWRSAPVE
Ga0308309_104523472	3300028906	Soil	VEKLDPQTLPGLIRDLQAELRAPPAARSRPLTQRHEIARQRIEAPHEILDWAIRDERWSYTLAEVMAGAVGRPRDLAARLVIAIVDELQDED
Ga0311336_106960881	3300029990	Fen	VEKLQPQKLPDLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPHDLATGLVVAIADELEEESEMLDDDDLETWRAAPIG
Ga0311333_107137261	3300030114	Fen	VPVEKLQPQKLPDLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPHDLATGLVVAIADELEEESEMLDDDDLETWRAAPIG
Ga0302287_102349891	3300030673	Fen	VEKLQPQKLPDLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPHDLATGLVVAIADELEEESE
Ga0311366_102354283	3300030943	Fen	LGQPLAVSGLVAKIKEVPVEKLQPQKLPDLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPHDLATGLVVAIADELEEESEMLDDDDLETWRAAPIG
Ga0170834_1138516203	3300031057	Forest Soil	PQKLPGLIRELRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGSLSRPRDVATGLVVAIADELEEESEMLDDSSETWRTAPIE
Ga0170822_156119171	3300031122	Forest Soil	PQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKCDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMLDDDDLETWRSAPIE
Ga0170823_145676062	3300031128	Forest Soil	VDKFEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKQDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEKE
Ga0170824_1059432323	3300031231	Forest Soil	VEKLQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGSLSRPRDVATGLVVAIADELEEESEMLDDSSETWRTAPIE
Ga0170824_1109829981	3300031231	Forest Soil	VEKFQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKQDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEE
Ga0265325_101108372	3300031241	Rhizosphere	VEKLQPQKLPGLIRDLRVELRRPDRRPRAQLYELARRRIEAPHEILDWAKHDRRWSFTLAEIMTGTLSRPRDLAIGLVVAIADELEEEREMLDHDDLETWRSAPIE
Ga0265325_103893951	3300031241	Rhizosphere	EVPVEKLQPHKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGSLSRPRDLATGLVVAIADELEEEREMLDDDDLETLRSAPLE
Ga0265340_101407492	3300031247	Rhizosphere	VEKFEPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLARPRDLATGLVVAIADELEEE
Ga0311364_111388102	3300031521	Fen	VEKLEPQKLPDLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSQPRDLAIGLVVAIADELEEESEMLDDDDLETWRAAPIG
Ga0265313_100386182	3300031595	Rhizosphere	VEKLDPQTLPGLIRDLQAELRAPPAARSRPLTQRHEIARRRIDAPHEILDWAIHDERWSYTLAEVMAGAVGRPRDLAARLVVAIVDELQDEDDLLAAETAAAT
Ga0265313_104249631	3300031595	Rhizosphere	FLLLLESRCSPLVELRARKARGEPLRSEGALTSFVEVPVEKSQPQKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTVARPHELATGLVVAIADELEEESELLADSSETWRSAPVE
Ga0318497_104444482	3300031805	Soil	VEKLQPPKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDDSETWSTAPIE
Ga0311367_100428741	3300031918	Fen	LGQPLAVSGLVAKIKEVPVEKLQPQKLPDLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADEL
Ga0308175_1020970362	3300031938	Soil	VEKFQPQKLPGLIRDLRAELRRPDRCPRAQLYERARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTPSRPRDLATGLVMAIADELEEESEMLHDDDLETQRSARIE
Ga0308176_106318082	3300031996	Soil	VEKFQPQKLPGLIRDLRAELRRPDRCPRAQLYELARRRIEAPHEILDWAKSDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE
Ga0318505_102001492	3300032060	Soil	VEKLQPPKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDDSETWSTLPIE
Ga0335085_109134421	3300032770	Soil	LEKLEPTKLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKRDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEEREMLDDSETWSAAPIE
Ga0335075_105822471	3300032896	Soil	QPQQLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILEWAKSDRRWSFTLAEIMTGTVSKPHDLATGLVVAIADELEEESELLADESETWRAAPVE
Ga0370494_054480_80_454	3300034130	Untreated Peat Soil	LGESLAISRLVAKFQEVPVEKLQPQTLPGLIRDLRAELRRPDRRPRAQLYELARRRIEAPHEILDWAKCDRRWSFTLAEIMTGTLSRPRDLATGLVVAIADELEEESEMREDDDLETWRSAPIE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081569

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences