Sample 3300001271

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300001271

3300001271: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY90

Overview

Basic Information
IMG/M Taxon OID	3300001271 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0085351 \| Gp0054666 \| Ga0012383
Sample Name	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY90
Sequencing Status	Permanent Draft
Sequencing Center	J. Craig Venter Institute (JCVI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	1616966484
Sequencing Scaffolds	18
Novel Protein Genes	19
Associated Families	16

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota	1
Not Available	7
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales → Leptocylindraceae → Leptocylindrus → Leptocylindrus aporus	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus adriaticus	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Macroalgal Surface Microbial Communities
Type	Host-Associated
Taxonomy	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Surface (saline)

Location Information
Location	Botany Bay, Sydney, NSW, Australia
Coordinates	Lat. (^o)	-33.966629	Long. (^o)	151.166614	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F013301	Metagenome / Metatranscriptome	272	Y
F024891	Metagenome / Metatranscriptome	204	Y
F028441	Metagenome / Metatranscriptome	191	Y
F039667	Metagenome / Metatranscriptome	163	Y
F043611	Metagenome / Metatranscriptome	156	Y
F071971	Metagenome	121	N
F072518	Metagenome / Metatranscriptome	121	Y
F082762	Metagenome / Metatranscriptome	113	Y
F083262	Metagenome / Metatranscriptome	113	N
F087132	Metagenome	110	N
F093942	Metagenome / Metatranscriptome	106	Y
F096759	Metagenome / Metatranscriptome	104	Y
F099391	Metagenome / Metatranscriptome	103	Y
F102142	Metagenome / Metatranscriptome	102	Y
F105197	Metagenome	100	Y
F105201	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
BBAY90_10005322	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1771	Open in IMG/M
BBAY90_10008277	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1507	Open in IMG/M
BBAY90_10009453	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
BBAY90_10016370	All Organisms → cellular organisms → Eukaryota	1156	Open in IMG/M
BBAY90_10020975	Not Available	1052	Open in IMG/M
BBAY90_10029240	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	921	Open in IMG/M
BBAY90_10037318	Not Available	835	Open in IMG/M
BBAY90_10041856	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
BBAY90_10047558	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Chaetocerotophycidae → Leptocylindrales → Leptocylindraceae → Leptocylindrus → Leptocylindrus aporus	757	Open in IMG/M
BBAY90_10071430	Not Available	642	Open in IMG/M
BBAY90_10079627	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus adriaticus	615	Open in IMG/M
BBAY90_10086344	Not Available	595	Open in IMG/M
BBAY90_10103905	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	554	Open in IMG/M
BBAY90_10114144	Not Available	535	Open in IMG/M
BBAY90_17913948	Not Available	861	Open in IMG/M
BBAY90_17926444	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	789	Open in IMG/M
BBAY90_17926727	Not Available	517	Open in IMG/M
BBAY90_17930202	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	608	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY90_10005322	BBAY90_100053221	F093942	MVERRIQGKDDLHYFWYYDTLYPDMFFDEEDMRYINFRYTDAKVVPDPLTAYYPYDHLKYGQFLNKKEENLFTKAPTYN*
BBAY90_10008277	BBAY90_100082772	F105201	MLFHDEELDEEELNKIFAQFDSKTIELIRKEYAND*
BBAY90_10009453	BBAY90_100094536	F105197	MTDEQINARIAELRAKPLLKCDEAEIRELISYYDDQQLREIQVNLHKHIRSIERKKKHFFEYWRCKDILKWAGQEECSRPMTSDFLNDVFKTS*
BBAY90_10016370	BBAY90_100163701	F039667	VGLDVKVRELNYSLLAIQQKGGIGLRSPREYFKEWTNGNKKLDAGEFEQALGAFG*
BBAY90_10020975	BBAY90_100209753	F087132	VATTRRQKVRAVKDEENRRALSIRGKAEYIFDLIDQIGELNPSEDEHFAAKVQQKKTQAELRLKMLAKTLPDLKQVDADLTSSDGSLTPPMVIELVAKGLD*
BBAY90_10029240	BBAY90_100292402	F013301	MATVYLPVEPIEGMTSGERADALDRECWSLYRPDSIKNPNDVTRRLFPEVTHPDTEQVAIIGQTDEQVYISPEVDLTNLLALLPEVPQTEKDLLVTYIEINKGG
BBAY90_10037318	BBAY90_100373182	F082762	MLNLIAAGATYLFPGGRALKLVKDGIDVTNSTNPLILTKNITLIVVDCCTPPPVRLAAHCVAAGSLIAASFVSPNPVTIGSAIHVVTEIYENC*
BBAY90_10041856	BBAY90_100418562	F028441	MTLKQLIKLEDKASEVWVISPTLHYDTENKEFTELVSVNLGQKTKYRYIVPASRTVLKNLKVFKKTYKVSDAEIQKLFCILPETEFNPFIQEIDTNDVIKFDQAHAKDMAKAFKAIWKKYKFVNP*
BBAY90_10047558	BBAY90_100475581	F096759	DNYLDEEDPWKGILSATAFAVRSTYHTTLQKSPGQLVFGRDMIFNIQHKANWKFIKERKQKLINKNNAQENSKRIPLTYTVGQKVLLRKGTENKYETPYSGPHTILQVNDNGTVRMQVGATIDTYNIRRLTPYIQSQNPNHGGECSMRISKKRRSSRINRATQE*
BBAY90_10071430	BBAY90_100714302	F105201	LSVTTSRMLFHDEELDEEELNKCFKKLTPETLKLLQKEYAHD*
BBAY90_10076060	BBAY90_100760601	F043611	MLILLNLLNFAPILLFIHCLFIFLFKKIGPIGTFYASIFIFFSSLIITLNELYFILLNGNYYFLDFGKFFCLDILDSHLIFCIDNLSLISASLVLTLTMLALYF
BBAY90_10079627	BBAY90_100796273	F071971	MTVSVYYNAESIINAINNTAKYGLENLNKVHAAFSIGLNITHIDNPTINAPEAIAVHRYTAPIMSLPFSVVKKNGAIENNTIT
BBAY90_10086344	BBAY90_100863441	F024891	HNNSFGFYNCMIIVEEFTNPTIKMYLRDFTTESFEIEIISESDKEDIYEDISGTYDSFRKTLSFSYDTSVLYPENFYIIKIWEVGKVKLLSQDKMYVLPSGSEVGTYQPKLTTTEKTMNNEYKIYGE*
BBAY90_10103905	BBAY90_101039053	F105201	MLFHDEELDVEELYKCFEKLDPKTLELIKLEYDAV*
BBAY90_10114144	BBAY90_101141441	F072518	MARPPKNFIRYKNERVLKKLLSHAEEQAEYWKDYGFIGDTTYWAAKVVDLRAQLFALYHEREEFDKLDTI*
BBAY90_17913948	BBAY90_179139481	F102142	MSKERMFNETISNVFKASLVGILAVVITAIPFEQFIAQLFGVSFEEFGGGMPTLYLLPLFLIYTAIAYVLAKMKKNLNVSKRGAFFIIFAFHYIIVAFLPELEGEIYLPAFPFLQTLISTFILALAVVSLIFYLWKQEDNPEAKAGQQIKSYFSSRSVMSWAWRFLLVWLLFYVLTMILGIVALPFNQPYLDDAMNTLGMEVPSMGTLFAITQFRSFFYILVTLPFIIFWKSGKKDLFLYLALINVIQYPLLGDGVGSYFWPVMY
BBAY90_17926444	BBAY90_179264442	F099391	QWSARDTLGSFALNESDILVFGGDYGWISDCFMIQTKTNEISKFDCSLKKPEDFFRSQPVKYNDKVFCVGHLDKDVHVYSIKAKKWFLLDKWFVEW*
BBAY90_17926727	BBAY90_179267273	F083262	MRDPNIDRYLHEMAMLFQNLGIDSTPEERIYANEEERRYISKIYDLDPEAGKRLGYD
BBAY90_17930202	BBAY90_179302022	F028441	VWVVSPTLHYDVDNKDFSELVSVNLGEKTKYRYIVPATSAVIKNITAYKKMYGVTEADIENNFLILPTSEFNPFITETAIYDASTSCIACAAPALEDSNDVIKFNEETSKGMAKAFKSLWKKYKRKNP*

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