NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F093040

Metagenome / Metatranscriptome Family F093040

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093040
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 59 residues
Representative Sequence MLTTAMRLAGAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLN
Number of Associated Samples 88
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.96 %
% of genes near scaffold ends (potentially truncated) 96.23 %
% of genes from short scaffolds (< 2000 bps) 96.23 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(28.302 % of family members)
Environment Ontology (ENVO) Unclassified
(51.887 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(75.472 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.09%    β-sheet: 0.00%    Coil/Unstructured: 90.91%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002652|Ga0005484J37272_103417Not Available743Open in IMG/M
3300002655|Ga0005476J37264_103200Not Available856Open in IMG/M
3300002656|Ga0005494J37277_101585Not Available838Open in IMG/M
3300002659|Ga0005474J37262_105732Not Available843Open in IMG/M
3300002660|Ga0005454J37223_101297Not Available601Open in IMG/M
3300002664|Ga0005488J37274_103757Not Available818Open in IMG/M
3300002668|Ga0005482J37270_101084Not Available617Open in IMG/M
3300002668|Ga0005482J37270_101457Not Available537Open in IMG/M
3300002668|Ga0005482J37270_101489Not Available860Open in IMG/M
3300002672|Ga0005490J37275_102477Not Available847Open in IMG/M
3300002678|Ga0005477J37265_105929Not Available599Open in IMG/M
3300002678|Ga0005477J37265_107122Not Available656Open in IMG/M
3300002678|Ga0005477J37265_110661Not Available514Open in IMG/M
3300002681|Ga0005471J37259_103513Not Available855Open in IMG/M
3300004099|Ga0058900_1002254Not Available516Open in IMG/M
3300004101|Ga0058896_1448062Not Available521Open in IMG/M
3300004103|Ga0058903_1015314Not Available575Open in IMG/M
3300004103|Ga0058903_1017905Not Available785Open in IMG/M
3300004115|Ga0058890_180680Not Available507Open in IMG/M
3300004118|Ga0058886_1003125Not Available793Open in IMG/M
3300004118|Ga0058886_1007183Not Available839Open in IMG/M
3300004118|Ga0058886_1012001Not Available823Open in IMG/M
3300004120|Ga0058901_1010157Not Available594Open in IMG/M
3300004120|Ga0058901_1038857Not Available849Open in IMG/M
3300004121|Ga0058882_1038880Not Available855Open in IMG/M
3300004132|Ga0058902_1004057Not Available841Open in IMG/M
3300004134|Ga0058906_1031410Not Available785Open in IMG/M
3300004136|Ga0058889_1005327Not Available769Open in IMG/M
3300004137|Ga0058883_1012812Not Available807Open in IMG/M
3300004467|Ga0068978_1206117Not Available501Open in IMG/M
3300004473|Ga0068919_1017357Not Available687Open in IMG/M
3300004475|Ga0068969_1475539Not Available654Open in IMG/M
3300004631|Ga0058899_12305371Not Available795Open in IMG/M
3300004971|Ga0072324_1296990Not Available542Open in IMG/M
3300005644|Ga0075036_1121980Not Available502Open in IMG/M
3300005644|Ga0075036_1150280Not Available555Open in IMG/M
3300010164|Ga0063827_141834Not Available570Open in IMG/M
3300010854|Ga0126360_1042068Not Available826Open in IMG/M
3300010854|Ga0126360_1123173Not Available769Open in IMG/M
3300010856|Ga0126358_1025746Not Available506Open in IMG/M
3300010856|Ga0126358_1110293Not Available555Open in IMG/M
3300011072|Ga0138563_1038203Not Available528Open in IMG/M
3300011082|Ga0138526_1141009Not Available817Open in IMG/M
3300011088|Ga0138576_1220225Not Available779Open in IMG/M
3300016698|Ga0181503_1139429Not Available590Open in IMG/M
3300016700|Ga0181513_1344139Not Available574Open in IMG/M
3300016750|Ga0181505_11001300Not Available844Open in IMG/M
3300019161|Ga0184602_100306Not Available844Open in IMG/M
3300019163|Ga0184581_115161Not Available572Open in IMG/M
3300019164|Ga0184582_125829Not Available609Open in IMG/M
3300019174|Ga0184579_113367Not Available751Open in IMG/M
3300022499|Ga0242641_1035423Not Available563Open in IMG/M
3300022499|Ga0242641_1036406Not Available558Open in IMG/M
3300022502|Ga0242646_1030611Not Available551Open in IMG/M
3300022503|Ga0242650_1016012Not Available594Open in IMG/M
3300022506|Ga0242648_1019738Not Available853Open in IMG/M
3300022507|Ga0222729_1018120Not Available811Open in IMG/M
3300022509|Ga0242649_1049373Not Available588Open in IMG/M
3300022510|Ga0242652_1013691Not Available804Open in IMG/M
3300022512|Ga0242676_1036869Not Available572Open in IMG/M
3300022525|Ga0242656_1055507Not Available697Open in IMG/M
3300022529|Ga0242668_1043676Not Available777Open in IMG/M
3300022529|Ga0242668_1097297Not Available593Open in IMG/M
3300022530|Ga0242658_1087368Not Available727Open in IMG/M
3300022530|Ga0242658_1104445Not Available683Open in IMG/M
3300022531|Ga0242660_1079113Not Available771Open in IMG/M
3300022533|Ga0242662_10253434Not Available572Open in IMG/M
3300022708|Ga0242670_1043988Not Available618Open in IMG/M
3300022711|Ga0242674_1020525Not Available770Open in IMG/M
3300022711|Ga0242674_1041385Not Available610Open in IMG/M
3300022714|Ga0242671_1023745Not Available876Open in IMG/M
3300022714|Ga0242671_1057118Not Available662Open in IMG/M
3300022714|Ga0242671_1066534Not Available629Open in IMG/M
3300022717|Ga0242661_1043516Not Available817Open in IMG/M
3300022722|Ga0242657_1151811Not Available611Open in IMG/M
3300023547|Ga0247554_101510Not Available810Open in IMG/M
3300023564|Ga0247515_112735Not Available847Open in IMG/M
3300028860|Ga0302199_1194923Not Available619Open in IMG/M
3300030586|Ga0265393_1042638Not Available818Open in IMG/M
3300030738|Ga0265462_11746876Not Available593Open in IMG/M
3300030762|Ga0265775_105150Not Available748Open in IMG/M
3300030764|Ga0265720_1003391Not Available848Open in IMG/M
3300030805|Ga0265756_104514Not Available790Open in IMG/M
3300030806|Ga0265731_104159Not Available532Open in IMG/M
3300030812|Ga0265734_103366Not Available646Open in IMG/M
3300030816|Ga0265729_104297Not Available534Open in IMG/M
3300030833|Ga0265736_101262Not Available823Open in IMG/M
3300030834|Ga0265738_105176Not Available557Open in IMG/M
3300030863|Ga0265766_1015993Not Available584Open in IMG/M
3300030873|Ga0265751_103726Not Available832Open in IMG/M
3300030873|Ga0265751_114334Not Available537Open in IMG/M
3300030874|Ga0265742_1006759Not Available818Open in IMG/M
3300030876|Ga0265730_100999Not Available816Open in IMG/M
3300030884|Ga0265758_102593Not Available782Open in IMG/M
3300030887|Ga0265733_103177Not Available594Open in IMG/M
3300030888|Ga0265769_113201Not Available593Open in IMG/M
3300030913|Ga0265759_102483Not Available818Open in IMG/M
3300030982|Ga0265748_109863Not Available517Open in IMG/M
3300031128|Ga0170823_12592084Not Available569Open in IMG/M
3300031592|Ga0310117_115240Not Available795Open in IMG/M
3300031808|Ga0316037_104674Not Available849Open in IMG/M
3300032515|Ga0348332_11310876Not Available521Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil28.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil26.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.47%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.49%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil3.77%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.83%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.94%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.94%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002652Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF133 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002655Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF125 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002656Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF143 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002659Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF123 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002660Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF103 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002664Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF137 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002668Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF131 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002672Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF139 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002678Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF126 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002681Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004101Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004115Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004118Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004121Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004132Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004134Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004136Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004137Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004467Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 75 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004473Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004475Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004971Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005644Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010164Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 61 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010854Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010856Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011072Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011082Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011087Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011088Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300016698Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016700Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019161Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019163Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019164Soil microbial communities from Bohemian Forest, Czech Republic ? CSI3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019174Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022499Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022502Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022503Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022711Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023547Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023564Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028860Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3EnvironmentalOpen in IMG/M
3300030586Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030762Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030764Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030805Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030806Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030812Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030816Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030833Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030834Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030863Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030873Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030874Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030876Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030884Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030887Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030888Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030913Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030982Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031592Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031686Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031808Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE3 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0005484J37272_10341713300002652Forest SoilMFTTAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARPPLHSTFR
Ga0005476J37264_10320013300002655Forest SoilMFTTAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSYVDRNPLARQPLHSTFR
Ga0005494J37277_10158513300002656Forest SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLR
Ga0005474J37262_10573213300002659Forest SoilMRLAGAEVVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0005454J37223_10129713300002660Forest SoilMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0005488J37274_10375713300002664Forest SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREASATLNLPF
Ga0005482J37270_10108413300002668Forest SoilMLTPAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSCVDSHPLARPPLHSTFRS
Ga0005482J37270_10145713300002668Forest SoilMLTPAMRLAEAEEVKHALSVHHPKTGTDCKGSGLPTNSDLSPVTRDYPRRSRVDGQSPR
Ga0005482J37270_10148913300002668Forest SoilMLTPAMRLAEAEGVKHALGVRHPKTGTGRKGTGLPTNPALSPVTRDYPRRSHADGHPLARPPLRSTFRS
Ga0005490J37275_10247713300002672Forest SoilMLTTAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARLPLHSTF
Ga0005477J37265_10592913300002678Forest SoilMLTTAMRLAGAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0005477J37265_10712213300002678Forest SoilMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREAAATLNLP
Ga0005477J37265_11066113300002678Forest SoilMLTPAMRLAEAEEVKHALSVHHPKTGTDCKGLGLPTNPNLSPVTRDYPRRSRVDGQSPREASATLN
Ga0005471J37259_10351313300002681Forest SoilMLTPAKRLAEAEEVKHALGVHHPRTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGHPLARLPLHSTFR
Ga0058900_100225413300004099Forest SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRR
Ga0058896_144806223300004101Forest SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDG
Ga0058903_101531413300004103Forest SoilMLTPAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDG
Ga0058903_101790513300004103Forest SoilMRLAAAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATL
Ga0058890_18068013300004115Forest SoilMFTTAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRS
Ga0058886_100312533300004118Forest SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARLPLHS
Ga0058886_100718313300004118Forest SoilMLTPAMRLAEAEEVKHALSVHHPKTGTDCKGSGLPTNPNLSPVTRDYPRRSRVDGQSPREASA
Ga0058886_101200113300004118Forest SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGHPLARLPLHSTFRS
Ga0058901_101015713300004120Forest SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0058901_103885733300004120Forest SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0058882_103888013300004121Forest SoilMLTPAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0058902_100405713300004132Forest SoilMLTPAMRLAEAEEVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0058906_103141013300004134Forest SoilMFTTAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVT
Ga0058889_100532713300004136Forest SoilMLTPAMRLAEAEEVKHALSVHHPKTGTDCKGPGLPTNPNLSPVTRDYPRRSRVDGQSPREASATL
Ga0058883_101281223300004137Forest SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSR
Ga0068978_120611713300004467Peatlands SoilMLTPAMRLAEAEGVKHALGVHHPKTGTDRKGPGLLINPDLSPVTRDYPRRSRVD
Ga0068919_101735713300004473Peatlands SoilMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRR
Ga0068969_147553913300004475Peatlands SoilMLTPAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRS
Ga0058899_1230537113300004631Forest SoilMLTPAMRLAEAEGVKHALGVRHPKTGTDRKGAGLPTNPALSPVTRDYPRRSHVDGQSPREASATL
Ga0072324_129699023300004971Peatlands SoilMAHSLALLAAHLPLVAMLTAAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREATATLNL
Ga0075036_112198013300005644Permafrost SoilMFTTAMRLAGAEGVKHALGVHHPKTGTDRKGAGLPTNPDLSPVTRDYPRRSRVDGQSPR
Ga0075036_115028013300005644Permafrost SoilMLTTAMRLAEAEGVKHALGVHHPKTGTDRKGAGLPTNPDLSPVTRDYPRRSRVDG
Ga0063827_14183413300010164Peatlands SoilMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREATATLNL
Ga0126360_104206813300010854Boreal Forest SoilMFTTAMRLAGAEGVKHALGVHHPKTGTDRKGAGLPTNPDLSPVTRDYPRRSRVDGQSPREATATLNLP
Ga0126360_112317313300010854Boreal Forest SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRD
Ga0126358_102574613300010856Boreal Forest SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVD
Ga0126358_111029313300010856Boreal Forest SoilMRLAGAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVD
Ga0138563_103820313300011072Peatlands SoilMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSHVDGQSPREASATINL
Ga0138526_114100913300011082Peatlands SoilMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREATATLNL
Ga0138570_119918813300011087Peatlands SoilVKHASGVRHPKVGTELEGPGLPTNPDLSPVTRDYPRKSRVDGHPLARHPLHSTF
Ga0138576_122022513300011088Peatlands SoilMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0181503_113942913300016698PeatlandMFTTAMRLAGAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRIDG
Ga0181513_134413913300016700PeatlandMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDG
Ga0181505_1100130013300016750PeatlandMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0184602_10030623300019161SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0184581_11516113300019163SoilMLTTAMRLAEAEGVKHALGVRHPKTGTDRKGTGLPTNPDLSPVTRDYPRRSRIDGHPLA
Ga0184582_12582913300019164SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTKPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0184579_11336733300019174SoilMLTPAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRS
Ga0242641_103542323300022499SoilMRLAGAEVVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0242641_103640613300022499SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREASATLN
Ga0242646_103061113300022502SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVD
Ga0242650_101601223300022503SoilMLTTAMRLAGAEVVKHALGVHHPKMGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0242647_102930813300022505SoilVKHALGVRHPKTGTDRKGAGLPINPDLSPVTRDYPRRSRIDGHPLARRPLHS
Ga0242648_101973813300022506SoilMRLAEAEGVKHALGVRHPKTGTGRKGTGLPTNPALSPVTRDYPRRSRTDGHPLARLPLYSTF
Ga0222729_101812013300022507SoilMFTTAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRV
Ga0242649_104937313300022509SoilMLTTAMRLAGAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLN
Ga0242652_101369133300022510SoilMLTTAMRLAGAEVVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQS
Ga0242676_103686913300022512SoilMLTTAMRLAGAEGVKHALGVHHPKTGTDHKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0242656_105550723300022525SoilMLTTAMRLAGAEVVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0242668_104367613300022529SoilMFTTAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTR
Ga0242668_109729713300022529SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0242658_108736813300022530SoilMRLAGAEGVKHALGVRHPKTGTDRKGAGLPINPDLSPVTRDYPRRSRVDSHPLARP
Ga0242658_110444513300022530SoilMRLAEAEGVKHALGVHHPKTGTDHKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0242660_107911313300022531SoilMFTTAMRLAEAEGVKHALGVHHPKTGTGRKGTGLPTNPDLSPVTRDYPRRSRVDGHPL
Ga0242662_1025343413300022533SoilMLTTAMRLAGAEGVKHALGVHHPKTGTDHKGPGLPTNPDLSPVTRDYPRRSRVDG
Ga0242670_104398813300022708SoilMFTTTMRLAGAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRYRVDGQSPREASATRIF
Ga0242674_102052513300022711SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGHP
Ga0242674_104138513300022711SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTKPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0242671_102374523300022714SoilMRLAEAEGVKHALGVRHPKTGTDRKGAGLPTNPALSPVTRDYPRRSHADSHPLARPPLRSTFRSLKEKR
Ga0242671_105711823300022714SoilMYTPAMRLAEAEGVKHASGVHHPKMGTFREGLGLPTNPSLSPVTRDYP
Ga0242671_106653413300022714SoilMLTTTMRLAVAEGVKHALGVHHPKTGTDRKGPGLPTKPDLSPVTRDYPRRSRVDGQSPREASAT
Ga0242678_101829813300022715SoilLGVHHPKTGTGRKGPGLPTKPDLSPVTRDYPIRSRVDGHPLARPPLHSTF
Ga0242661_104351613300022717SoilMLTTAMRLAGAEVVKHALGVHHPKMGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPRE
Ga0242657_115181113300022722SoilMLTTAMRLAGAEVVKHALGVHHPKMGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0247554_10151033300023547SoilMLTPAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDG
Ga0247515_11273513300023564SoilMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTKPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0302199_119492313300028860BogMFTAAMRLAVAEGVKHALGVHHPKTGTDRKGTGLPTNPDLSPVTRDYPRRSRS
Ga0265393_104263813300030586SoilMFTAAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPIDPDLSPVTRDYPRRSHVDGQSPREASATLNL
Ga0265462_1174687623300030738SoilMLTPAKRLAEAEEVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGHPLAR
Ga0265775_10515013300030762SoilLGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREAFATLNL
Ga0265720_100339113300030764SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREAFATLNL
Ga0265756_10451413300030805SoilMRLAGAEGVKHALGVHHPKTGTNRKGPGLPTNPDLSPVTRDYPRRSRVDDPPLA
Ga0265731_10415913300030806SoilMFTTAMRLAGAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARPP
Ga0265734_10336613300030812SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREAFATLNLP
Ga0265729_10429713300030816SoilMLTPAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVD
Ga0265736_10126213300030833SoilMCTTAMRLAGAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLAR
Ga0265738_10517613300030834SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREA
Ga0265766_101599313300030863SoilMFTTAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVD
Ga0265751_10372613300030873SoilMFTTAMRLAGAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLAR
Ga0265751_11433413300030873SoilMRLAKAEEVKHALGVHHPRTGTDRKGPGLPINPDLSPVTRDYPRRSRVDG
Ga0265742_100675913300030874SoilMLTPAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGHPL
Ga0265730_10099913300030876SoilMCTTAMRLAGAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDG
Ga0265758_10259313300030884SoilMRLAVAEGVKHALGVHHPRTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREASATLNL
Ga0265733_10317713300030887SoilMFTTVMRLAGAEGVKHALGVHHPKTGTDRKGAGLPPNPDLSPVTRDYPRRSRVDGQSPREATATLNL
Ga0265769_11320113300030888SoilLGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREAFATLNLPF
Ga0265759_10248313300030913SoilMRLAEAEGVKHALGVHHAKTGTDRKGPGLPTNPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0265748_10986313300030982SoilMRLAEAEEVKHALGVRHPKTGTDRKGPGLPTNPNLSPVTRDYPRRSRVDGHPLARRP
Ga0170823_1259208413300031128Forest SoilMRLAKAEGVKHALGAHHPKVGADRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARPP
Ga0310117_11524023300031592SoilMRLAVAEGVKHALGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGQSPREAFATLNLPF
Ga0310119_13055813300031686SoilLGVHHPKTGTDRKGPGLPINPDLSPVTRDYPRRSRVDGHPLARPPLHSTF
Ga0316037_10467413300031808SoilMLTPAMRLAEAEGVKHALGVHHPKTGTDRKGPGLPTKPDLSPVTRDYPRRSRVDGQSPREASATLNLP
Ga0348332_1131087613300032515Plant LitterMRLAGAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.