Sample 3300030887

3300030887: Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE5 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300030887 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0306363 \| Ga0265733
Sample Name	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE5 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	11142475
Sequencing Scaffolds	78
Novel Protein Genes	82
Associated Families	68

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	72
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → valley → plant litter
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	Norway: Oslo
Coordinates	Lat. (^o)	59.9989	Long. (^o)	10.7903	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000203	Metagenome / Metatranscriptome	1619	Y
F000206	Metagenome / Metatranscriptome	1598	Y
F000344	Metagenome / Metatranscriptome	1257	Y
F000396	Metagenome / Metatranscriptome	1185	Y
F001357	Metagenome / Metatranscriptome	716	Y
F001380	Metagenome / Metatranscriptome	709	Y
F002020	Metagenome / Metatranscriptome	603	Y
F003050	Metagenome / Metatranscriptome	510	Y
F003383	Metagenome / Metatranscriptome	490	Y
F003497	Metagenome / Metatranscriptome	483	Y
F004473	Metagenome / Metatranscriptome	436	Y
F006591	Metagenome / Metatranscriptome	369	Y
F007311	Metagenome / Metatranscriptome	353	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009043	Metagenome / Metatranscriptome	324	Y
F009688	Metagenome / Metatranscriptome	314	Y
F010621	Metagenome / Metatranscriptome	301	Y
F011079	Metagenome / Metatranscriptome	295	Y
F011845	Metagenome / Metatranscriptome	286	Y
F012024	Metagenome / Metatranscriptome	284	Y
F012875	Metagenome / Metatranscriptome	276	Y
F014264	Metagenome / Metatranscriptome	264	Y
F015231	Metagenome / Metatranscriptome	256	Y
F018868	Metagenome / Metatranscriptome	232	Y
F020134	Metagenome / Metatranscriptome	225	Y
F022652	Metagenome / Metatranscriptome	213	Y
F022827	Metagenome / Metatranscriptome	212	Y
F023797	Metagenome / Metatranscriptome	208	Y
F024561	Metagenome / Metatranscriptome	205	Y
F024793	Metagenome / Metatranscriptome	204	Y
F025750	Metagenome / Metatranscriptome	200	Y
F027219	Metagenome / Metatranscriptome	195	Y
F028056	Metagenome / Metatranscriptome	192	Y
F030100	Metagenome / Metatranscriptome	186	Y
F030305	Metagenome / Metatranscriptome	185	N
F030627	Metagenome / Metatranscriptome	184	Y
F031323	Metagenome / Metatranscriptome	182	Y
F031388	Metagenome / Metatranscriptome	182	Y
F034577	Metagenome / Metatranscriptome	174	Y
F038944	Metagenome / Metatranscriptome	164	Y
F039163	Metagenome / Metatranscriptome	164	Y
F040634	Metagenome / Metatranscriptome	161	N
F041210	Metagenome / Metatranscriptome	160	Y
F044295	Metagenome / Metatranscriptome	154	Y
F047147	Metagenome / Metatranscriptome	150	Y
F048323	Metagenome / Metatranscriptome	148	Y
F050386	Metagenome / Metatranscriptome	145	Y
F058583	Metagenome / Metatranscriptome	134	N
F058585	Metagenome / Metatranscriptome	134	N
F059538	Metagenome / Metatranscriptome	133	N
F060406	Metagenome / Metatranscriptome	133	N
F062325	Metagenome / Metatranscriptome	130	Y
F063428	Metagenome / Metatranscriptome	129	Y
F066322	Metagenome / Metatranscriptome	126	N
F067296	Metagenome / Metatranscriptome	125	Y
F068321	Metagenome / Metatranscriptome	124	N
F068528	Metagenome / Metatranscriptome	124	Y
F075760	Metagenome / Metatranscriptome	118	Y
F076700	Metagenome / Metatranscriptome	117	N
F080934	Metagenome / Metatranscriptome	114	Y
F081387	Metagenome / Metatranscriptome	114	Y
F081989	Metagenome / Metatranscriptome	113	N
F086415	Metagenome / Metatranscriptome	110	N
F093040	Metagenome / Metatranscriptome	106	N
F093895	Metagenome / Metatranscriptome	106	N
F098814	Metagenome / Metatranscriptome	103	N
F102643	Metagenome / Metatranscriptome	101	N
F104202	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0265733_100110	Not Available	1779	Open in IMG/M
Ga0265733_100275	Not Available	1358	Open in IMG/M
Ga0265733_100736	Not Available	976	Open in IMG/M
Ga0265733_100884	Not Available	923	Open in IMG/M
Ga0265733_100951	Not Available	905	Open in IMG/M
Ga0265733_101030	Not Available	880	Open in IMG/M
Ga0265733_101106	Not Available	858	Open in IMG/M
Ga0265733_101167	Not Available	843	Open in IMG/M
Ga0265733_101197	Not Available	836	Open in IMG/M
Ga0265733_101203	Not Available	834	Open in IMG/M
Ga0265733_101240	Not Available	825	Open in IMG/M
Ga0265733_101305	Not Available	810	Open in IMG/M
Ga0265733_101333	Not Available	806	Open in IMG/M
Ga0265733_101361	Not Available	803	Open in IMG/M
Ga0265733_101366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	803	Open in IMG/M
Ga0265733_101405	Not Available	795	Open in IMG/M
Ga0265733_101509	Not Available	779	Open in IMG/M
Ga0265733_101514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	778	Open in IMG/M
Ga0265733_101627	Not Available	762	Open in IMG/M
Ga0265733_101657	Not Available	756	Open in IMG/M
Ga0265733_101875	Not Available	725	Open in IMG/M
Ga0265733_101877	Not Available	725	Open in IMG/M
Ga0265733_101997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	707	Open in IMG/M
Ga0265733_102002	Not Available	707	Open in IMG/M
Ga0265733_102011	Not Available	706	Open in IMG/M
Ga0265733_102145	Not Available	688	Open in IMG/M
Ga0265733_102171	Not Available	684	Open in IMG/M
Ga0265733_102241	Not Available	676	Open in IMG/M
Ga0265733_102289	Not Available	672	Open in IMG/M
Ga0265733_102355	Not Available	665	Open in IMG/M
Ga0265733_102441	Not Available	657	Open in IMG/M
Ga0265733_102470	Not Available	654	Open in IMG/M
Ga0265733_102494	Not Available	652	Open in IMG/M
Ga0265733_102745	Not Available	628	Open in IMG/M
Ga0265733_102811	Not Available	622	Open in IMG/M
Ga0265733_102901	Not Available	616	Open in IMG/M
Ga0265733_102928	Not Available	613	Open in IMG/M
Ga0265733_102946	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	611	Open in IMG/M
Ga0265733_103066	Not Available	602	Open in IMG/M
Ga0265733_103177	Not Available	594	Open in IMG/M
Ga0265733_103270	Not Available	590	Open in IMG/M
Ga0265733_103288	Not Available	589	Open in IMG/M
Ga0265733_103305	Not Available	588	Open in IMG/M
Ga0265733_103399	Not Available	585	Open in IMG/M
Ga0265733_103447	Not Available	583	Open in IMG/M
Ga0265733_103450	Not Available	583	Open in IMG/M
Ga0265733_103492	Not Available	581	Open in IMG/M
Ga0265733_103495	Not Available	581	Open in IMG/M
Ga0265733_103500	Not Available	581	Open in IMG/M
Ga0265733_103506	Not Available	581	Open in IMG/M
Ga0265733_103510	Not Available	581	Open in IMG/M
Ga0265733_103516	Not Available	580	Open in IMG/M
Ga0265733_103534	Not Available	580	Open in IMG/M
Ga0265733_103662	Not Available	575	Open in IMG/M
Ga0265733_103673	Not Available	574	Open in IMG/M
Ga0265733_103701	Not Available	572	Open in IMG/M
Ga0265733_103768	Not Available	569	Open in IMG/M
Ga0265733_103782	Not Available	569	Open in IMG/M
Ga0265733_103819	Not Available	567	Open in IMG/M
Ga0265733_103829	Not Available	567	Open in IMG/M
Ga0265733_103844	Not Available	566	Open in IMG/M
Ga0265733_103855	Not Available	566	Open in IMG/M
Ga0265733_103994	Not Available	559	Open in IMG/M
Ga0265733_104202	Not Available	549	Open in IMG/M
Ga0265733_104215	Not Available	548	Open in IMG/M
Ga0265733_104283	Not Available	545	Open in IMG/M
Ga0265733_104312	Not Available	543	Open in IMG/M
Ga0265733_104324	All Organisms → cellular organisms → Eukaryota	542	Open in IMG/M
Ga0265733_104333	Not Available	542	Open in IMG/M
Ga0265733_104411	Not Available	539	Open in IMG/M
Ga0265733_104628	Not Available	531	Open in IMG/M
Ga0265733_104650	Not Available	530	Open in IMG/M
Ga0265733_104683	Not Available	529	Open in IMG/M
Ga0265733_104685	Not Available	529	Open in IMG/M
Ga0265733_104903	Not Available	520	Open in IMG/M
Ga0265733_105164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
Ga0265733_105342	Not Available	505	Open in IMG/M
Ga0265733_105354	Not Available	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0265733_100110	Ga0265733_1001102	F086415	MPSIEQEPLPRNALSSARLWTSPASRLGHRDSGSRRLFTPQEPLRTPEGPGPRPRAPLPTGDTLLWTSASLADFCNLKQRAGTPNERSILTREWSFRSATRRHQPMPVALARDTLPHRGPASLDLHAPACARRVPLAWTGQMEGRSVRGKASRALLDDVARALLVAPRAPGSPVRLVMRSGGPRHSSPRPRFPFDASPRRATPSKEPGCLLPRRNPYASGGWLLRARLDRGLV
Ga0265733_100275	Ga0265733_1002751	F050386	LIVHLYLLGVQVEGTWKSYLWKRISELHKLMVDIQTAHAKLGSQDGNSREH
Ga0265733_100736	Ga0265733_1007361	F030305	AAIRAVDHLDANRRDELLAGPRLQEGFVGPLQFIGSCIVPFGFLVPVPSFLFPALSDLARRCSSGRPVPRVSDRTGDEAPSCPGSSVFSAVPADGSSSRPDSRILQLGSPQIARLPRLSTSCLAVDERPGCPVRSIIWLYRRRRFRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVAFRVSPDLPPSDICRFRFSGLPQIGFLGGSMMNPRFARTLHPRSIQLTSLQVAPKFPLPAAPRMNLQTHSGLAFLPTLRCSLNLYPLIACRRTGLLRTTINQFRIACRAGLQSVSL
Ga0265733_100884	Ga0265733_1008841	F059538	LGGRVVQPLLRPSATPAVRLQLSLPLLPLAAPVSNLRLASAALPPARPRANLPARIGVVSLGSVSGKCSAFAAYYALPIDWLLTFQLALVSGLQLGLRLLPTHIWRCPSARLVFQLPVLTGCRCNN
Ga0265733_100951	Ga0265733_1009511	F031323	VFLAELAVTGSFKERAIMDSATTSVSSDPKGVLTVNLANDATFTRISKIWDRHRKQGLEDRHHTGVLLNEKFGSSNVRQAYGEKVLKAYSERLCISVSKLSRMRRFASRFVSLEDMKTQHPDVKTWTQAKELLASTRKNETQKVESPEGNDQKKPNGNQPVSHAIRAIQAVRQCISKVQLAPAGDERTAFSEAVKGMLADIEKILGVRYAPENPFQAVTFSPLQDVIQHAPMTAVA
Ga0265733_101030	Ga0265733_1010301	F003383	LPRLLHLPAQSGLRLRVAPYPAPFLLGRRPNPQVAPWFRSFGCAGDGRSSCPELRMPSAVLVSAGFRVSPVAPTSSCGAPDVGLGFPLVLHLRLYRRWIIESPRFSHLSAVPTCRFSGCPEPQPFGIADDSSLELPRASNPPAPTDGYPSYLGSRTIRFALVGSPSCLEHLPFGYGNRPISRLP
Ga0265733_101106	Ga0265733_1011062	F058585	LDHSQYSRCCVLRLPQWPPSSFRWRCYHWLRWLSELRLASGPCTPARPVANLPARIGFVSFGSTGCKPSTCVDCSALPLVLRRSIWLAPDDPGLIGLAPDNPGSTRLAPRGPFLRLGRQPTSDSHRCRPLARLAASSGLRLMLPLPLGWLRFQFALAASPSALTVREPLGLRLVAPSPAEPVMHSLFQLNLASPAKPSMSILYPPALASSGIFQPNNFRLASAFALLVRPAIPLRLAPQVSPSVRVYGHRSGSHRLFAP
Ga0265733_101167	Ga0265733_1011671	F081989	MPRALFHPKVDAADEGAGLPVNPDLSPVTRDYPRALPRTHPPRRGPAARRAP
Ga0265733_101197	Ga0265733_1011972	F006591	CSPHTLSQSPVLGRPPSQVGGRLLDASPRGNAEFSVSWQDRRQNYFRRLLGEAFQRGSHGPCRGSVLHKVMRPLRHGLVTAVLQVGPRELPPERWPDGTGLASYPSIDI
Ga0265733_101203	Ga0265733_1012031	F006591	ALATRSFPCTGPWALTPSQVGGRLLDASSRGNAELSVSWQNRRQNCFQRLLGEAFQHGSQNPCRGTAPYKVMRPLRHGLVTAVLEVGPRELPPERWPKGTGLASYPSIDI
Ga0265733_101240	Ga0265733_1012401	F018868	MRSKTSLAAKSGVGEHTARESEAPNVCDGKECVASTHPQ
Ga0265733_101305	Ga0265733_1013051	F007311	HFAVAPVTDYSMLDAWLSLLHADCSALYIVRPVPVTDLTRCSTLSALLLPRIAPRLILCARAGRGSLRATDCSVVQHLELCTACGLLRTRYLAFRVVLGLLLARRFPLCVARGLLRARRLALDAGLRITPYADILRPYAVYGLLHIRH
Ga0265733_101333	Ga0265733_1013332	F093895	PELLVPTFSTLHRSGITPCSTLASCAIHGVLRGRHRMPVLAADCSAINPLALRPAHELLRARHLAFRFVPGLLLARRFPPCVELGLLRVQLSRSVSSSDFSALVPSRFATLTDCSVHVAWLLVSRPERSVLSTSTRSCPPITRCATLCASHRSRITSCPTLDLPSPAQIAPRL
Ga0265733_101361	Ga0265733_1013611	F003383	RILHLPTQPGLRFRVAPYLAPFLLNRRPNPQVAPWLRPFGCAGDGPLRLPRASHPSALLVSARCWVSPVTLASSCSARDVGLGLPLVPHLRLHRQWIVESPRLSHLSAVPTGQSSSRPESRPFGIADDSSPRLPQTPNPPVPADRYPSYLGSRTIRFALVESPGCPGHSPLATAIDQFPGCPKSRVFRRSPILLNSSRPEPWFLG
Ga0265733_101366	Ga0265733_1013661	F020134	MTPIGGAGDSACRAVARSKGRAAPAAAYLSPVTRDYPSRALGVFFSPPRFD
Ga0265733_101405	Ga0265733_1014052	F011079	MLKTTPLDCEIKCSLREKRRDPWPWANASPQAMADPRPVVKTRKTKNRRRVLTWFAGRWRNHQPKRAEKPHSKAVHRKMPDGPATRPETPLAVENSVGKPAAPNQGAPNAGSGKREWR
Ga0265733_101509	Ga0265733_1015091	F030100	RMLETVSRIIPGDWGKVESGWLAQPLRNEAARPSERGRIHQFLWQRSRAVSKREKGTEPRGTIRNRSEPSQVAQAGFEPE
Ga0265733_101514	Ga0265733_1015141	F020134	MTPSRGAGDIAFPAVARLKGRAAPAATILSPVARDYPNRALGGVFRPPRCDCWRHETGDPAKPWR
Ga0265733_101569	Ga0265733_1015691	F000203	LFPVPTFGTPAGVAGFPTPFSTASGVSGLVAGPSKVLRPVDFE
Ga0265733_101627	Ga0265733_1016271	F001380	PGFTVRFSDPSACGRSLCGEMPRINRLWLTITAFQHATGHSPKRVFIGHSILPEPESRCGLSLAHNDAFATIARSMFLACTFVSQSKTFANPFDSRLLRSVRFRGRIGAISSPGTRFPRQSPTLPIYPRSPLPFRSSFENLPDQSVQPVPSQEARLA
Ga0265733_101657	Ga0265733_1016571	F081387	MGAAKHPTVGSSGEYWSMNESLNQWIAEMNDLLNHEGYDSCKVCAWVRIMILHLKRTPGQQRASSCGKTLTGERYWPLLGVKSG
Ga0265733_101875	Ga0265733_1018751	F023797	MLGKPLMLSPISIRRSGAARVDTIPLLDRTSHRPAVRRMSLPMSLESSLPQLAPRAIFRLLSNLSSSCVAGNVHFQFP
Ga0265733_101877	Ga0265733_1018771	F023797	MLGKPLMLSPLSIRCSGAARVDTIPLLDRTSHRPAVRRMSLPMSLESSFPQLAPQAIFRLLSNLSSSCVAG
Ga0265733_101943	Ga0265733_1019432	F102643	MGGRSHPKLNILGRPIAKKYSDGKVKRTLKRRSKVLETVKRETDGASNYPMGIQIIHFYSASQLVNKSTECLVGWLLGYYVRYLVCMFVNIKYKRGIFHGGR
Ga0265733_101997	Ga0265733_1019971	F000344	MRPKHPHAAESGVGKHTARESERAQSCATGKERVANAHP
Ga0265733_102002	Ga0265733_1020021	F067296	RNSQFESSAASSGYRPANLRFAPAINLSASPSNQPPTCVGCLSPALPSNRNFQPFIDCQILQQVFRSMSSLRLQPTVRLNLPASGRLASPANLPVPLSSRPATVAACRTFSHAFQSPSSLRLPSIFRLNLPANLFDLRLLVDLPALLPNLTSDSRRRSHLLALPSN
Ga0265733_102011	Ga0265733_1020111	F024793	VNSASPELSLWFQRSRINQPDPAFPRSPGIIQKPSNLNLTFDRRL
Ga0265733_102145	Ga0265733_1021451	F076700	GSSGCAGTVAPTYVSALHSGSTSGQPSGSDRFRVLRLDRLQTSDSHRLFRSSDRPVVTCSTCVEPSFLRLGRQPTSDSHRGRPLARLAASSGLRLMLPLPLVWLRVQFAPVASPYVFTGREPLGLRLVAPSPAEPLMHSLFPPNLASTAKPSMSIPFPLALASSGIFQLNIFRLASAFALLVRPAIPLWLAPQVSPSVRAGGHPPVLTGCPLRQPCWRSTSGLRRLSLL
Ga0265733_102171	Ga0265733_1021711	F038944	MRSRTSHAAKSGVGEHKARESESAQRCAKGKSAWRA
Ga0265733_102241	Ga0265733_1022411	F063428	RGKVGLGWLARLLLNWPKGLAAEAKFTGSSGAFARAKCE
Ga0265733_102289	Ga0265733_1022891	F009688	GARILSEAFQLASAGGCATGLPTRSRHAYDFFVRVFTTGSGSATAFDGAFALNHGSRLFTLKLLFFHSPAVSFLTSPAFGRFSRGLPSHCVLPDTCALVVRLSAFLFGRFNFLFLNRQSCRHRADTQ
Ga0265733_102355	Ga0265733_1023551	F034577	LRRAACIFITGPFARAGVFLARSGLRLRGFRSGVKGPRLTLRSLTPRLILLVRPFSSATRRWFAPAAGGIHASDPLHSCRSVLLAARPTSAPLREFLLPPAQSVQLVTRPSGPPSKHARSSFAPRSRSISRWATDHRSRSATFPEACCSSNLSRRFSYTQLVGFRSVAFVLLR
Ga0265733_102441	Ga0265733_1024411	F047147	FIKKYFTIISTATTDLVREEQFVYDMCLLGAVTVEITQILTRAGK
Ga0265733_102470	Ga0265733_1024701	F010621	LTWFAGRWRNHQPKRAEKPHSKSTGREAMDGPATRPKTPLAVENGV
Ga0265733_102494	Ga0265733_1024941	F009017	VVPSDPISSLAHHGHASVLSIAFRIAVRFAYLLPGNRFGGYRFNAFRRAAAFYPKLDRSLVTAFPSPTTASAFANSIPGSMVLACYFTVSFARCHARSVFPLNRRNWFAPIPAASTLQTRCTFTSKLIRPHSPSPLPSRSFSSFGIKAFNGRRCRPVRLPNPPDFRLLPATVLFLEEGYGSSFAVRRGRASKGPWAGWRQ
Ga0265733_102745	Ga0265733_1027451	F024561	VAPGQRTAKSGGRPGANGADAEPQSQTCLHLVRKLASANASPSELRGLTRRFSRRKALD
Ga0265733_102811	Ga0265733_1028111	F040634	TGMHGTELRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLVAAFPSPRTPSACADSTLRSMVLACHFAHLLAVRPARSTFRLPRQGLVGPSFRRHPRLKPVAFCAGPLCRLCRQIPLPFRSFRSLRIKALPGFATVRSAFRNCPIFVRSPQPFLLKFGCGS
Ga0265733_102901	Ga0265733_1029011	F028056	LSEPPACSALDPQPDTPDSTFAARRRRFSACAGSVQQTFPRRIHIRPEPETRNGLSLARNDAFATITGSTFLACSFESTYKLCANPFDRKLSTRFGFEAATRANSSPSTRYPRVAYTLLRRHTVSTSLWAFLPSGSERSTGFITRSSPYRTPDLPLAPRRAFFRLRFGSVLKTSLRPAWLSF
Ga0265733_102928	Ga0265733_1029281	F104202	MRGVTTARVRRDPAILPSQSLTLGCGLSLACNDCAPCGCLRGRVTVPGLPLRIFPGLPQCPFGPKAPRTGILSDSATDLHLRTRYTSLHSGLPHRLTVLSPLRELAGFPSRLIPWAQRARPLNHTGNSPWYSARFSFPPQRLFLLWMPLDHRSGSATVYQACCSI
Ga0265733_102946	Ga0265733_1029461	F039163	TERYIDHTGSEKTPVRIVQQXGILVNGLTAEPATWKNES
Ga0265733_103066	Ga0265733_1030661	F011845	PGFTVRFSDPSACGRSLCSQMPGLNRSSLAITAFQQETGHSFKRVYAARPHRTQHPAGAGISIRPFARSQRRFRHHCEVYVPDLYLRFPVGNPRESVRFLAPSLRSVSRLNRGDINALNPFPALISDAPDLSPVSTPLEVFFRRPSGSKRSTGSISGNPPYPTLDCSVRPAASSFDSATDCSGVTQVETRLVRLDYRSVN
Ga0265733_103177	Ga0265733_1031771	F093040	MFTTVMRLAGAEGVKHALGVHHPKTGTDRKGAGLPPNPDLSPVTRDYPRRSRVDGQSPREATATLNL
Ga0265733_103270	Ga0265733_1032701	F025750	MEKADAHRSIDPWPAKTGGGEQRAHVTPSLDAKFWPCMPVGERAGRRVT
Ga0265733_103288	Ga0265733_1032881	F041210	MLPGTSQHGISTEPIARNGLSLARNGCPLSEASIPGSKVPAYYLPTFQLISSPGPPSAPLPPLVCPRWWQLLRLQPVASSLAGSLGCFPCLHSPPGLLSPSGSKRSTGSAASRLAFRLRPISFRSPLPVLLLVLAADQRSRFATSSETCCSSNL
Ga0265733_103305	Ga0265733_1033051	F040634	MHGTEHRISDCRAYSPQAPRLLVYPTSASPLLDAPQLIFPKRDRLLVAAFPSPRTTPACADSALRSLVPAFYFAHSLAVRPARSAFWLPRQGLVSPSFRRHPRLKPVAFCTGPLCQLCRQVPLPFRSFRSLQIKASLGVATVRSAFRNCPIFVRSPQPFLLKFGYGS
Ga0265733_103399	Ga0265733_1033991	F009043	VPSDLISQPDPPPACTALSLAFRNAGCCPFGSALLSLESNVSMPRGSPADFPEWSRHLEAAFHSPKTTVRLRTAISRSKFPTYSFNALPGTRQARSVSDSPTRSGLPQPAQDPHQKPVARLLSASPNRSLDLHSLSGPFGPFRIKAFNPIPGYEAHLPNTPDGLSLPGLGSILLAPMPDHRSRFASRSAACCSTD
Ga0265733_103447	Ga0265733_1034471	F027219	MNKTNLLLSTAVGLAFVVAGSSAMAVGQKHTLPGNAKAHTAVNFAKAPFKRAHENHGKPNHLKARQTVDTWGATTVALLGGFATEDAATTVNCLKACRVVTENTAEFLSYYSYNQVGICPLVDGYFTNGSCYFSGALSPKELYSNRTNQTNLDVASGSHVVQTYVYTIAPAYLGHYQNDYHLYEAHAPH
Ga0265733_103450	Ga0265733_1034501	F068528	MRTTDFCFPLPDYEYPCFVSYRHLFEAHASPLADGLAPVTRRPVELAFHDAQSASVGLPRLARGVFFRRSRSSR
Ga0265733_103492	Ga0265733_1034921	F014264	SLAGSSGSGTMIRRAYVIRDYFWRGGERGKIGRLVRVSFSVWKKAERYNPEGSKGPDGE
Ga0265733_103495	Ga0265733_1034951	F014264	SLAGSSGSGTMIRRAYVIRDYFWRGGERGKIGRLVRVSFSVWKRTEHYNPEGSRGPGGE
Ga0265733_103500	Ga0265733_1035001	F031388	GTASLRKRSDPGTVIRSQTLAIETAAGSERKSGGSGRCRKTAESVERFDPEGCKSPGGEWRPRKQSSGPARRAATGLKRRSCPQLGQTSEGRGAEGGPGGEPSWEVAKWQVRTVDPGMEASEREQPLWARERPLRATGSVEEKDAVRPGGIDPEAEKLALGERNGEALSAP
Ga0265733_103506	Ga0265733_1035061	F003497	MHGQSMARSVLVMSALLLPATAFIQLRISAPGPIRLIYLLEAFVSERPFARPQRLFSFENHRSEVKAPDLSLRRNSELFFQPVRPCAPTLGDVRHASGDVRHTKPVAVSRAQNYQISIQLSLPFRAFVPPDRSAQSAARSEKLTLVHGPFFLRSPKASITF
Ga0265733_103510	Ga0265733_1035101	F075760	FQVTLGQHRSSPACTALSMALGRAGRVAFPLHDNRFRRLSLRRLKARRVTLPDGTVRSRRRFPRPQRFPLTRIPFRGYWSPPDASLACKPDNFTRSVFWLRYLPLVCPSGRRHPRLKPVALLPICFSGRAANLHSPAGVFAPFGSKRSTGYPAFRSTFQIRPIFVRSPQPFYF
Ga0265733_103516	Ga0265733_1035161	F062325	VPSDPISSLAHHGHASVLSIAIRSAVRLACLLPGNRFGGHRFNAFRHAAAYLLKLNRRLVTAFPSPATAYAFADSIPGSMVLTCYFAV
Ga0265733_103534	Ga0265733_1035341	F000396	VPSDPISQPNSPPACNGTELCNRDRRVLSFQLPVAPFGERQINAFRLTCQLSWLKPASRSGLSLSRNDCPFPGHHFEVKAPDLPLRRPTAHSSCPFGSRFPHALRFAPLRAGSSSQSRCLIPARHFQPFLGSPLPFRAFRTLKDQSVQPDSWPKSSPSEHSRLPITPRHRFLFY
Ga0265733_103662	Ga0265733_1036621	F022827	CHPRYLQRFRRSLSTSPFPARSSPARTSPPAFRPAARCPEGCSLVPRRALRPHPGVEVSLAFSLDPAPHGFRFGIRAIPAVPTRLAKFYPSELESACASYPASSPCVSIRLARRHFLLDLPRTRRSFSTLAGFQLRSYGPTVSPSSLLPAHFYMCRSSAGSSRFSFRMVALRLPPGCSEPIAFAESFFLLS
Ga0265733_103673	Ga0265733_1036731	F001380	PGFTARFSDPSACGRSLCGQMLRIKSPTARRRRFSARQRVIATNESSSDFSILPGPESRYGLSLARNDAFATIARSMFLTCTFVSTSETFPNPFDSRLFRSVRFRGRTGATSTPGTRYPCRFPTFLNLPQSPLPFRSSFENPPDQSVQPVPCQEARLTKRSIVPCSPPLPLSILRQINA
Ga0265733_103701	Ga0265733_1037011	F058583	RVHGTIERTTGMLGVRSAANLSLNLRTAARRRCFSTCAGSVPRSILKLKSLRRSWKLETAFRSLATTFAHHCEVNVPDLLLRFHTENPAEPVRSRTPPLRSVFEAEPGRILRPLPVALRRFPALLRFHSISTPLEAYLQSPPDQSVRPSSSRRNLPDETLACLLLPSARSFRILPRITALGALYSARLIV
Ga0265733_103728	Ga0265733_1037281	F098814	LPVDFPITGFAGIRINASRRAAYSFRTGLFARNGLSLARQDFRLRGFRDEVNVPDLLLRLRILRFCRPFRLPLHGQSRFAPFSAASTLQTRCGVAVRFRRPRCQLRLPLRTVISLRIDASAGLAACQPTFQGCPISVRSPQPLSISRFGCGSSFPARYCPVGF
Ga0265733_103768	Ga0265733_1037681	F004473	VVKLVERFDPEGWKQPKGEWRPDGIMRAPEIGADNGSKVMNSPGIGFETEPSGGAFGRAGSQRNTGVETKGQGGSVDLVMVAKASLRASERPFRVSGSGRMQLLKPRFQH
Ga0265733_103782	Ga0265733_1037821	F034577	RSASLIAGMHGTEHRIMKRRTLRLSAPRQPASAGCRFVALKRIARIFTMGPFARAGVFLARSGFRLREFRSGVIGPRLTLRSLANRLILLVRSFGSATCRWFAPAAGGIHASNPLHSCRFAFLAAPPISTPLREFSLPSDQSVRLVTRPSGPPSRSARSSFAPRSRSISS
Ga0265733_103819	Ga0265733_1038191	F012875	PGFTARLSEPPACSALDPRPDTPDSTFAARRRRFSANTGSVQQTFPQRIYIRPEPETRNGLSLACNDAFATITRSTFLACPFDSTYKLCADPFRRRLSARFGFEAETGRIQHPRPVIHAPLPRSHDATPSPLPFGRFRPPDQSVQRATSQEARLTGHPICLLLPAALSFDCAADQCSKLRFVPLGYRS
Ga0265733_103829	Ga0265733_1038291	F022652	SRVHGTIDRTTRMLSVRSAAKCALSFVRCSPLLPFSLPRVNAANALFGFRTLPEPVSRCGLSLARNDALTPFRGQCSRPAPSIPRRTPSRIRSISGSFTPFGFEADPGRYRRPTPVSRADFRRSRVFHPPPLPFGHFRTLRLKAFSEHPTREARLTELRSPFAPRCDFFRFRSGSTLPVRCVPLDYRSV
Ga0265733_103844	Ga0265733_1038442	F048323	YFDSLTGITESESGESSEELKITGKPELHKNEKLERK
Ga0265733_103855	Ga0265733_1038551	F040634	MHGTEHRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLAAAFPSPRTPSACADSTLRSMVLACYFAHSLAVRPARSAFWLRRQGLVGPSFRLHPRLKPVAFCTGPLCRLCRHVPLPFRSFRSLRINALPGFATVRSAFRNCPIFVRSPQPFYLKFGCGS
Ga0265733_103994	Ga0265733_1039941	F003050	MESAKAGAVAGEGKAVTSERSSFGLSCGAPESVEAVTAKPVAGEQTGKAHGAPERGAQYGCMPVVSSA
Ga0265733_104202	Ga0265733_1042021	F076700	VQSVLRPPATPVAALQLSLALLPLAALAFRTPTCVDALHSSSTGGQPSGSDRFRVLRLDQLQTSDSHRLFRTSDRPVATRSTCVEPSFLRLGRQPTSDSHRCRLLARLAASSGLRLMLPLPLEWLRVQFAPVASPYAFTGREPLGLRLVAPSPVEPVMHSLFPPNLASTAKLSMSIPLPLALA
Ga0265733_104215	Ga0265733_1042151	F060406	GVSMLGELNSTTGCRVLRLPQRPTPSFRLRSRPLAAPARCFRLASTASHSGSTGGRLSRLGSAFCRSARSVANLRFASALRTAVRPLADLPACAGVLPQARPRTNFRLTSDLDSSARLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGEPPTRIGCPSSGFTGFDSLGLRLVLLPP
Ga0265733_104283	Ga0265733_1042831	F080934	VQSAKSCALAPLLPAPDFRPFRINARKRASRLTANRNLLLGTAFRSPKKTACFQAPFPGSMLLTYPFGSPLSLLRTRSIHPLVHAAWLAPDGANSTRQTRCPVPSERPRPFFKPSLPFGAFRTPPDQSDDLNTSREAHQIATPDFLRSPLPAVLIEPSNGSTF
Ga0265733_104312	Ga0265733_1043121	F015231	VSFRRLRLSKGGLTAEQKSAEGVLGHDVGGASEALRKPKGGAMDRPSRERWP
Ga0265733_104324	Ga0265733_1043241	F000206	LALLFAIFAVVVVAQNKPTWPKAASTSVFAHNWERRGDRHFIRWWFDGTQGKERIDGPREFLGEFFWTTTILDTTTKRETFIIHQESLISCYQRASNGTIPTPNFANARYAGKAEIELDVVDHWIERDPMRGRDFLQIFDRQSDGMVVRMDHDDERRGHSVTFRFHEWSVGAQDPALFTV
Ga0265733_104333	Ga0265733_1043331	F031388	VSRKAAESVERFDPEGCKNPGGEWRQRKQPRGPARRTATGLKRRSCPQLGQTSEGSGVEGGPGGDPSWEVAKWQARTVDPGMEASEKEQPLWARERPLRATGSVEKRDAVWPEGIDPGAEKSTLGERNGEALSAS
Ga0265733_104411	Ga0265733_1044111	F068321	RVSLYRMLTSVSERLHSIHWFRTDSFGNLLPTWARLGPLSVNQQGAALSHRRFDRGSFRCDRTPNGVAWRFPDWTAVGFAFPSPFLGSRPLWISVTRILATCWARFDHDRGSLSPRLVKPLAAILTRIASGVFFADDFRVALSLAADFRRARYPLLRTDLAWKVGLRIRSLFLFRRALS
Ga0265733_104573	Ga0265733_1045731	F081989	MPRALFHPKVDAADEGAGLPVNPDLSPVTRDYPRALPR
Ga0265733_104628	Ga0265733_1046281	F002020	IELREQERRTICLSAPRWPFSPAAGSMLPGSPLAASCPEPVARNGFSLARNSCRLSATSIPGSKLPACYFASFQVVSVPVRPFGSTTASRIAPVAAASLPGARCTSTTWFGLPRLRSPLPSGTFTSLGIKAFNRVCCLPVRLTNSPDFLSLPAARPD
Ga0265733_104650	Ga0265733_1046501	F030627	DRFCGDLLPAWARLGPLSVRRFLRIASGRRFCCGSFRRSNHPTGWHGGFPTGRPWDFAAERRKIAPTDKGWRSLPALPFPGPAPRIGLASSAVTGSIDLPWVQCTGVEGLSPRDPGTSLAATLTPIAHPAFWRRLVRGGLVAGRRLPPCPRLIASHGLL
Ga0265733_104683	Ga0265733_1046831	F044295	AQTSNRTGVGECAEIGRIRKADRTAATPVERFDPEGAKIPGGEWRRREQPDELTGRDATGLKQGSGRDWGKPVPAAELKDRTGISTGRRDSEVAGQDR
Ga0265733_104685	Ga0265733_1046851	F048323	YFDSLTGITKSESGKSSEALKIMGKPELHKNEKFESL
Ga0265733_104903	Ga0265733_1049031	F060406	STTGCRVLRLPQRPTSRFRLRSRPLAALAPNLRLASPASHSSSTGGRLRRLGSTFCRSARTVANLRLSPALRASVRPLADLPTFVGVLPQARPRTNFRFAPDFDPSTRLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGEPPTRIGCPSSGFTGFDSLGLRLVLLPP
Ga0265733_105164	Ga0265733_1051641	F001357	MKRMLLTALIALALPMMAFAGSSYDFTNSGGTLTGTSAGLTLTGSELIALNGPGLGLVVGNLGTVTFSTGALTGGNLQMGATFASGGSFNITGNGTNGVPNGVIFNGSFTGPVTWTLVTLANGTHNYTLTGTIEGNWYNGSNVQGATVQLTINTGKGFFNGSTTISSGDT
Ga0265733_105342	Ga0265733_1053421	F066322	IQSIITQLNAANLTAAQTGILEGQLIQAEFQLAADLRRLGRPIDLNEWRDLLITRGDGLQQWAAYEISQAKNRSVEVRRVEELEVQIRNITAVLRNATLRSDLELLERVLNQVEENLIAELRILGSPAIPRDTIIALERRAEELAIKLIIAIRQLFADGRYLLAEGLQ
Ga0265733_105354	Ga0265733_1053541	F012024	LRLLAPREPVYPASASTLPDAPQPLCLSKTGPFARDGLSLARMISACADSIPESKILACHFAHSLASLSARSAFWLRRQPLVCPSFRLHPRLKPVAFLTGLLCRLCRPPPLPFRSFRSLGIKASTGFATVRSTFRNRPIFVRSPQPFH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300030887: Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE5 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences