Sample 3300030806

3300030806: Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300030806 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0306361 \| Ga0265731
Sample Name	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	9687469
Sequencing Scaffolds	96
Novel Protein Genes	100
Associated Families	76

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	92
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → Rubritepida flocculans	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → valley → plant litter
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	Norway: Oslo
Coordinates	Lat. (^o)	59.9982	Long. (^o)	10.7894	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001024	Metagenome / Metatranscriptome	803	Y
F001296	Metagenome / Metatranscriptome	728	Y
F001380	Metagenome / Metatranscriptome	709	Y
F003050	Metagenome / Metatranscriptome	510	Y
F003383	Metagenome / Metatranscriptome	490	Y
F003652	Metagenome / Metatranscriptome	475	Y
F004178	Metagenome / Metatranscriptome	449	Y
F004183	Metagenome / Metatranscriptome	449	Y
F004452	Metagenome / Metatranscriptome	437	Y
F004473	Metagenome / Metatranscriptome	436	Y
F005410	Metagenome / Metatranscriptome	401	Y
F006257	Metagenome / Metatranscriptome	377	Y
F006591	Metagenome / Metatranscriptome	369	Y
F007032	Metagenome / Metatranscriptome	359	Y
F007311	Metagenome / Metatranscriptome	353	Y
F008027	Metagenome / Metatranscriptome	340	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009043	Metagenome / Metatranscriptome	324	Y
F009688	Metagenome / Metatranscriptome	314	Y
F010404	Metagenome / Metatranscriptome	304	Y
F011845	Metagenome / Metatranscriptome	286	Y
F012875	Metagenome / Metatranscriptome	276	Y
F014264	Metagenome / Metatranscriptome	264	Y
F014631	Metagenome / Metatranscriptome	261	Y
F018180	Metagenome / Metatranscriptome	236	Y
F018722	Metagenome / Metatranscriptome	233	Y
F018868	Metagenome / Metatranscriptome	232	Y
F018933	Metagenome / Metatranscriptome	232	N
F019067	Metagenome / Metatranscriptome	231	Y
F020652	Metagenome / Metatranscriptome	222	Y
F020912	Metagenome / Metatranscriptome	221	Y
F021676	Metagenome / Metatranscriptome	218	Y
F021919	Metagenome / Metatranscriptome	216	Y
F022652	Metagenome / Metatranscriptome	213	Y
F023505	Metagenome / Metatranscriptome	209	Y
F024050	Metagenome / Metatranscriptome	207	Y
F024561	Metagenome / Metatranscriptome	205	Y
F025750	Metagenome / Metatranscriptome	200	Y
F027219	Metagenome / Metatranscriptome	195	Y
F028515	Metagenome / Metatranscriptome	191	Y
F029355	Metagenome / Metatranscriptome	188	Y
F029356	Metagenome / Metatranscriptome	188	Y
F030627	Metagenome / Metatranscriptome	184	Y
F030679	Metagenome / Metatranscriptome	184	Y
F031388	Metagenome / Metatranscriptome	182	Y
F033046	Metagenome / Metatranscriptome	178	Y
F034577	Metagenome / Metatranscriptome	174	Y
F034933	Metagenome / Metatranscriptome	173	Y
F037987	Metagenome / Metatranscriptome	167	Y
F038248	Metagenome / Metatranscriptome	166	Y
F038944	Metagenome / Metatranscriptome	164	Y
F040634	Metagenome / Metatranscriptome	161	N
F041528	Metagenome / Metatranscriptome	159	Y
F048323	Metagenome / Metatranscriptome	148	Y
F049346	Metagenome / Metatranscriptome	146	Y
F055457	Metagenome / Metatranscriptome	138	N
F058583	Metagenome / Metatranscriptome	134	N
F059538	Metagenome / Metatranscriptome	133	N
F060406	Metagenome / Metatranscriptome	133	N
F062337	Metagenome / Metatranscriptome	130	N
F065302	Metagenome / Metatranscriptome	127	Y
F066368	Metagenome / Metatranscriptome	126	Y
F072370	Metagenome / Metatranscriptome	121	Y
F072659	Metagenome / Metatranscriptome	121	N
F072836	Metagenome / Metatranscriptome	121	Y
F075760	Metagenome / Metatranscriptome	118	Y
F079435	Metagenome / Metatranscriptome	115	N
F080064	Metagenome / Metatranscriptome	115	Y
F081989	Metagenome / Metatranscriptome	113	N
F089654	Metagenome / Metatranscriptome	108	Y
F089744	Metagenome / Metatranscriptome	108	Y
F092391	Metagenome / Metatranscriptome	107	Y
F093040	Metagenome / Metatranscriptome	106	N
F096679	Metagenome / Metatranscriptome	104	N
F103993	Metagenome / Metatranscriptome	101	N
F105208	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0265731_100287	Not Available	1202	Open in IMG/M
Ga0265731_100332	Not Available	1148	Open in IMG/M
Ga0265731_100347	Not Available	1129	Open in IMG/M
Ga0265731_100356	Not Available	1118	Open in IMG/M
Ga0265731_100544	Not Available	1002	Open in IMG/M
Ga0265731_100646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	944	Open in IMG/M
Ga0265731_100648	Not Available	942	Open in IMG/M
Ga0265731_100835	Not Available	866	Open in IMG/M
Ga0265731_100878	Not Available	854	Open in IMG/M
Ga0265731_100888	Not Available	850	Open in IMG/M
Ga0265731_100893	Not Available	848	Open in IMG/M
Ga0265731_100895	Not Available	848	Open in IMG/M
Ga0265731_100897	Not Available	848	Open in IMG/M
Ga0265731_100928	Not Available	840	Open in IMG/M
Ga0265731_101049	Not Available	816	Open in IMG/M
Ga0265731_101105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	807	Open in IMG/M
Ga0265731_101112	Not Available	805	Open in IMG/M
Ga0265731_101132	Not Available	801	Open in IMG/M
Ga0265731_101148	Not Available	798	Open in IMG/M
Ga0265731_101160	Not Available	796	Open in IMG/M
Ga0265731_101180	Not Available	792	Open in IMG/M
Ga0265731_101313	Not Available	766	Open in IMG/M
Ga0265731_101334	Not Available	762	Open in IMG/M
Ga0265731_101386	Not Available	753	Open in IMG/M
Ga0265731_101407	Not Available	750	Open in IMG/M
Ga0265731_101459	Not Available	742	Open in IMG/M
Ga0265731_101467	Not Available	741	Open in IMG/M
Ga0265731_101539	Not Available	728	Open in IMG/M
Ga0265731_101693	Not Available	706	Open in IMG/M
Ga0265731_101991	Not Available	668	Open in IMG/M
Ga0265731_101998	Not Available	667	Open in IMG/M
Ga0265731_102013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → Rubritepida flocculans	666	Open in IMG/M
Ga0265731_102029	Not Available	663	Open in IMG/M
Ga0265731_102180	Not Available	647	Open in IMG/M
Ga0265731_102190	Not Available	646	Open in IMG/M
Ga0265731_102331	Not Available	631	Open in IMG/M
Ga0265731_102721	Not Available	600	Open in IMG/M
Ga0265731_102754	Not Available	598	Open in IMG/M
Ga0265731_102784	Not Available	595	Open in IMG/M
Ga0265731_102828	Not Available	594	Open in IMG/M
Ga0265731_102832	Not Available	594	Open in IMG/M
Ga0265731_102861	Not Available	591	Open in IMG/M
Ga0265731_102870	Not Available	591	Open in IMG/M
Ga0265731_102882	Not Available	591	Open in IMG/M
Ga0265731_102919	Not Available	589	Open in IMG/M
Ga0265731_102928	Not Available	588	Open in IMG/M
Ga0265731_103045	Not Available	582	Open in IMG/M
Ga0265731_103049	Not Available	582	Open in IMG/M
Ga0265731_103050	Not Available	582	Open in IMG/M
Ga0265731_103087	Not Available	581	Open in IMG/M
Ga0265731_103113	Not Available	580	Open in IMG/M
Ga0265731_103118	Not Available	580	Open in IMG/M
Ga0265731_103123	Not Available	580	Open in IMG/M
Ga0265731_103141	Not Available	578	Open in IMG/M
Ga0265731_103149	Not Available	578	Open in IMG/M
Ga0265731_103157	Not Available	577	Open in IMG/M
Ga0265731_103188	Not Available	576	Open in IMG/M
Ga0265731_103207	Not Available	575	Open in IMG/M
Ga0265731_103225	Not Available	575	Open in IMG/M
Ga0265731_103237	Not Available	574	Open in IMG/M
Ga0265731_103286	Not Available	572	Open in IMG/M
Ga0265731_103299	Not Available	571	Open in IMG/M
Ga0265731_103302	Not Available	571	Open in IMG/M
Ga0265731_103329	Not Available	570	Open in IMG/M
Ga0265731_103350	Not Available	569	Open in IMG/M
Ga0265731_103365	Not Available	568	Open in IMG/M
Ga0265731_103397	Not Available	567	Open in IMG/M
Ga0265731_103402	Not Available	566	Open in IMG/M
Ga0265731_103404	Not Available	566	Open in IMG/M
Ga0265731_103421	Not Available	565	Open in IMG/M
Ga0265731_103520	Not Available	562	Open in IMG/M
Ga0265731_103535	Not Available	561	Open in IMG/M
Ga0265731_103567	Not Available	559	Open in IMG/M
Ga0265731_103714	Not Available	553	Open in IMG/M
Ga0265731_103716	Not Available	553	Open in IMG/M
Ga0265731_103717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	553	Open in IMG/M
Ga0265731_103759	Not Available	551	Open in IMG/M
Ga0265731_103761	Not Available	551	Open in IMG/M
Ga0265731_103823	Not Available	548	Open in IMG/M
Ga0265731_103901	Not Available	545	Open in IMG/M
Ga0265731_103957	Not Available	541	Open in IMG/M
Ga0265731_104048	Not Available	537	Open in IMG/M
Ga0265731_104140	Not Available	533	Open in IMG/M
Ga0265731_104159	Not Available	532	Open in IMG/M
Ga0265731_104174	Not Available	531	Open in IMG/M
Ga0265731_104179	Not Available	531	Open in IMG/M
Ga0265731_104218	Not Available	530	Open in IMG/M
Ga0265731_104235	Not Available	529	Open in IMG/M
Ga0265731_104275	Not Available	527	Open in IMG/M
Ga0265731_104301	Not Available	526	Open in IMG/M
Ga0265731_104369	Not Available	523	Open in IMG/M
Ga0265731_104461	Not Available	520	Open in IMG/M
Ga0265731_104466	Not Available	519	Open in IMG/M
Ga0265731_104682	Not Available	510	Open in IMG/M
Ga0265731_104822	Not Available	506	Open in IMG/M
Ga0265731_104896	Not Available	503	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0265731_100287	Ga0265731_1002871	F009017	VPSDPISSLAHHGHASVLSIAFRIAVRFAYLLPGNRFGGYRFNAFRRAAAFYPKLDRSLVTAFPSPTTASAFANSIPGSMVLACYFTVSFARCHARSVFPLNRRNWFAPIPAASTLQTRCTFTSKLIRPHSPSPLPSRSFSSFGIKAFNGRRCRPVRLPNPPDFRLLPATVLFLEEGYGSSFAVRYVFGGSLFLQEAARSPADMLSRNLVV
Ga0265731_100332	Ga0265731_1003321	F103993	VPSRTPAPSQALFQIMTGLKLPGLLGLQATPVAVASQSARCVAASNVVGV
Ga0265731_100347	Ga0265731_1003471	F003383	AASGAFRMIFSSMDQCIVSFCLSMRLQVAPLPQSSRSARVASPGCPFPAPFLLSRRPNPRVAPRFRAFGCAGDGSLELPRASMPLALPVSASFPSCPGAPAFSCRACDEGLGSPLVLHLRLYRRSVIELPRCSHHSAVPTYRSSGCPKFQPFGIADDSLSESPRTSNPPAPIDGYPSYPGSRTTRFALVESPGCPGHFPLGYDD
Ga0265731_100356	Ga0265731_1003561	F003050	MESAKAEVVAGEGKAVTSERSSFGSSCGASESVEAVTTKLATVEQTGSAHGGSKRDAQYGCMPVVSKAGNRITW
Ga0265731_100544	Ga0265731_1005442	F007311	GFWTTIRLLSRGSSQRKPKRTSGRNRRPSCWPPHFAVAPVTDYSMLDAWLSLLHADCSALYIVRPVPVTDLTRCSTLSALLLPRIAPRMILCARAGRGSLRATDCSVVQHLELCTACGLLRTRYLAFRVVLGLLLARRFPLCVARGLLRARRLALDAGLRITPYADILRPYAVYGLLHIR
Ga0265731_100646	Ga0265731_1006461	F004178	MRSRTSHAAKSGVGEHTARESESAHCVCRESARGER
Ga0265731_100648	Ga0265731_1006481	F103993	MSSRTSAPSRASFQLVTGLKPPGVLGLHATPVAVASQSARCIAASNVVGV
Ga0265731_100703	Ga0265731_1007031	F019067	GREVGDDRVDVSRTPDALLCTLVVQEEVIHMVTSPEDTGVRRRSWNFCEVTSGVPTDPQTGYDTARKTGSFDELGYNDSVILRIILDVQKGEGEDHSSTEVGKMSMLGSRLASPRRENRAYWMIASVFQDAMLCTHKASEPKYAPQIMGGTGVTALFDNPKNVFFYMLACKGGTYKRIYATAVAEAQACLEYLEKGLQTAPILCPRLREKQEYFWGTYDNKVFVPNPGPLNEGPQGVQPMALLAQSGGANRYQAFENRLERTRRTVTRRQAEMEWQHTMRLQNIFWAVYPTMKEFAEIDKERSATA
Ga0265731_100835	Ga0265731_1008351	F040634	MHGTEHRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLAAAFPSPRTPSACADSTLRSMVLACYFAHSLAVRPARSAFWLRRQGLVGPNLRLHPRLKPVAFCTGPLCRLCRQIPLPFRSFRSLRINALPGFATVRSAFRNCPIFVRSPQPFLLKFGCGS
Ga0265731_100878	Ga0265731_1008781	F007311	CDLAVKCVPSCWPPHFAVAPVMDYSMLDAWRSPLRSDCSALHFLRPVPATDLTRRPTLNAPRLLRIAPRLTLCARAVRGLPRATDCSVVQHLELCPACGLLRPRCPAFRAVLGLLLARRFPPCGSPGLLRVRRLTRCAGLRIAPYADALRPWPVHGLLRARS
Ga0265731_100888	Ga0265731_1008882	F028515	VERGAIRVKPRTPSVEHGVIRDRRDRKVRGPATRDVFGRKA
Ga0265731_100893	Ga0265731_1008931	F060406	LGELNSTTGCRVLRLPQRPTSRFRLRSRPLAALARNLRLASPAPHSNSTGGRLRRLGSTFCRSARTVANLRLSPALRASVRPLADLPTFVGVLPQARPRTNFRFAPDFDPSTRLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGEPPTRIGCPSSGFTGFDSLGLRLVLLPPAGLLMHP
Ga0265731_100895	Ga0265731_1008951	F003383	LPRLLHLPAQSGLRLRVAPYPAPFLLGRRPNPQVAPWFRSFGCAGDGRSSCPELRMPSAVLVSAGFRVSPVAPTSSCGAPDVGLGFPLVLHLRLYRRWIIESPRFSHLSAVPTCRFSSFPEPQPFGIADDSSLELPRASNPPAPTDGYPSYLGSRTIRFALVGSPSCLEHLPFGYGNRPISRLP
Ga0265731_100897	Ga0265731_1008971	F007032	MVLACSFALWLPGARARSAFQLRRRYRLAPTPAVSQLQTRCTFPGQLFRLLSPSPLPSRSFSSLGIKAFNGRSRRPVRLPNPPDFRSLPETRSIASLGFGSSSAIRYVSGDLLFL
Ga0265731_100928	Ga0265731_1009281	F018933	GLGALRPDHVPSCWSQPSLLRRSRITPRSTLDSLYRPRIAPRSVLIDRCCPPIARRSTLNARRRSQIAPRSTLCARAGHGLLHVQHLESSPRVQIAPYSTLCAPRRSQIAPRSTLPARYRSRIAPLSAIDAPCRSTDISVRLHFAPCAVHGLLRAQHFKLRTAHRLLCVRRLHFVPIADCSAFLTPCLVSLADCSVLNT
Ga0265731_101049	Ga0265731_1010491	F081989	MPRARFHPKVDAADEGAGLPVNPDLSPVTRDYPRALPRTHPPRRGPASRRAP
Ga0265731_101105	Ga0265731_1011051	F038944	MRSRPSHAAKSGVGEHTARESESAQQYAPGKSVWRAPT
Ga0265731_101112	Ga0265731_1011121	F066368	LAVRSPDATGLASSLIDCFFSQSSGAVFNIAGLRKFVHAACPAIVSFPLQALFLVRFSAFSFGELNFYFESCRDAHTVLIRSSNQSLFWQLRFIQARNLPELLHSNRSGFSSLLTADPPFAFGARERTRGTGEFCLRCLPFGRFLEEPGQST
Ga0265731_101132	Ga0265731_1011322	F038944	MRSITSHAAESSVGKHTARESESAQCCVTGKSAWRAP
Ga0265731_101148	Ga0265731_1011482	F018868	MRSTASHAAKSGVGEHTARESEAPNVCDGKECVASTH
Ga0265731_101160	Ga0265731_1011601	F081989	MPRALFRPKAEAGHKGSGLPVNPDLSPVTRDYPRALPRTSSPRREPAARRTL
Ga0265731_101168	Ga0265731_1011682	F037987	MGVRHTLFPKPTLDARLSAAAGFPTPFSTASGVTGLVAGPSGDFHHADFE
Ga0265731_101178	Ga0265731_1011781	F041528	SPAFKELKSTDFRCEESGLMLVSNLLSGSERIVHRYTSLAIVTAAFSFGMAAAATPAIGVALSEGTIVVNDAQTPGNATVFNGTTLQTQRASSQVRLKDGAQVRFDLDSRGTLFSDHVDLQQGSARISDYSANANGLSVRASGDSSANVTMKGKVVEVAALTGNVQVFNAAGMNVANLLPGRALDLRPQDAGARAPSSLTGCAVKSGGNTLLTDESSNVTAQLRGGSVKTGTRVQVTGTLVPNATAASPATQVIAVTGVKEVGG
Ga0265731_101180	Ga0265731_1011801	F023505	NDKDDRKEVGEVPRIIPGDRGKVESGWLAQPLEDRFARGGNRRQYSPVPLAAFARSQ
Ga0265731_101313	Ga0265731_1013131	F009688	DGSAPSSLSRTGIGRPSGAAGFPTLFSTANGVFDLVAGPSNTFRPWILSEAFELAWADGCATGLPTRSRHACNLDRVLTTCPGTATDFDGAFARSHGSRLFTLRLPYFCSPAVSFLISPAPGSLSRSLPSRRELPDLCAPFVRLSTFLFLAGSTF
Ga0265731_101334	Ga0265731_1013342	F006591	SLGAPPLQVGGRLLDASPRGNAELSVSWQDRRQDCSRRLLGEAFQHGSHGPCRGNAPHKVMRPLRHGLVTAVLQVGPRELPPERWPEGTGLASYPSIDI
Ga0265731_101386	Ga0265731_1013861	F004178	MRSRTSHAAKSGVGEYTARESESAQRMRRERARGERPP
Ga0265731_101407	Ga0265731_1014071	F021919	VTRYRSETPRRHATAQSLAARIAGCFPFRSPQPFLEGYRSMLPGSPASFPSWNWHLEAAFHSPETTARFRATISRSKLPTCYFDTLPFVRPARSDFDSLTRSGSPRYAPDRYRNPVARLALSTSSPSSNLHSPLGPFGPFRIKAFDPIPGRKVRFPSAPDCLLLPSFNSILLASMPDHRSRLAKRSV
Ga0265731_101459	Ga0265731_1014591	F001024	MRPIIPLAVENGVGKLAANARQMPAWERESGELPSP
Ga0265731_101467	Ga0265731_1014671	F081989	MPRALFHPRVDADHEGAGLPINPDHSPVTRDYPRALPRTDSPRREADSRRAPFF
Ga0265731_101539	Ga0265731_1015391	F103993	VPSRTPAPSRASFQVVTGLKLPGLLGLQATPVAVASQSARCVASLERRQR
Ga0265731_101693	Ga0265731_1016931	F072836	TLLWTSASLADFCNLKQRAGTPNERSILAREWGFHPATRWHQPMPVASARDTLPHRGPASLELHAPACARRVPLTWTGQNEGRVVRAKASRALLDDVARALLVATRAPGSPARSAMRPGGPRRTSRRPRSLFDASPRRATPSKEPGCLLPRRNPYASGGWLPRARLDRGFVTPPPERHCSETRAPLLPVLRRLLLTRKAPEPARLTVPGDRSPRNDQSQRPSRLLRPNQLAGRCA
Ga0265731_101991	Ga0265731_1019912	F048323	FDSLTGITKSESGKSSEALKIMGKPELHKNEKFESL
Ga0265731_101998	Ga0265731_1019981	F021676	MADGPATRPLTPLAVENGVGNPAAPNPGAPNAGSGKREWRTPIPH
Ga0265731_102013	Ga0265731_1020131	F001380	VNANEAEARRRARFFPFGHTPGPMAFSDPSACRRSLCNRMFRIKSLSLSVAAFQPATGHSNKHVIIGLSIPPEPESRYGLSLAHNDAFATIARSTFLACTFVSISKTLANSFDSQLLRSGRFRGRTGATSTPGTRFPLLPSTLRIHRRSPLPFGSSLKNPSDQSVRSLLNSEARLTRRPIVSYSPPFPLTIPPRISARNSLRLSLTIAALHHAVPARHVRSA
Ga0265731_102029	Ga0265731_1020291	F080064	ETSSVDHGVICERCELSVPEMEQSMTGGGSQAMSAEQSAGKAGREVKGEEQSKLEAEGQVSGTK
Ga0265731_102180	Ga0265731_1021801	F072659	LAANSCEGANNVDACTVTALDATTAFAVPDPDLLLAELVGFFGSGYSADHSTESSHSVYFGSTTV
Ga0265731_102190	Ga0265731_1021901	F024050	LPLGFGPSAVPAMAVRVTPNVACLWRCLNQQGSELPRWLTSSCHACDEGLELPLIPHLRLYRRWITESPRCSHHSAVPTYRSLSFPKSRPFGIADDSLSELPRTLNPPAPIDGYPSYLGSRTIRFALVQSPSCPGHLPSAAAIDQFPGCPKSWVSHRSPIP
Ga0265731_102331	Ga0265731_1023311	F105208	MRHPESDVWFVRQGWKIDRQRKLQVGRKAAPKGSADDESRKLGSKAEPEGWT
Ga0265731_102721	Ga0265731_1027211	F020652	MVGRGPFAPRNRFYPTADRCSGARPLLLFPVETRLSMRPFALRQRRLIFRSVSAAGSTLLACIFEAIPKSPPGPFGSALPPPGWLFVAARGTIRMRNPLPGPISELPICDQASAPLQDLSILPARSAQLDSKQKSLPLRVARSSFAPRCARNNHLFTLRPGSPFQIRYFPPGSLSFE
Ga0265731_102754	Ga0265731_1027541	F009017	TPPRRQRSKKLKPHMPPISSSATSSAPRNAVRLACLLHGFRFSGYRFNAFRRAAAFPILDRWLVTAFPSPATVLAFANPIPGSMVPACYFALSFAGFCARSAFRLRCRNWFAPIPAASTPQARCTSARNLIRPLSPSPLPSGNFRSLGIKAFNGRCCRTVRLPNSPDLRSLPAARFFYR
Ga0265731_102784	Ga0265731_1027842	F040634	MHGTELRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLVAAFPSPRTPSACADSTLRSMVLACHFAHLLAVRPARSTFRLPRQGLVGPSFRRHPRLKPVAFCAGPLCRLCRQIPLPFRSFRSLRIKALPGFATVRSAFRNCPIFVRSPQPFLL
Ga0265731_102828	Ga0265731_1028281	F001296	MEVAERRQLLRASEKPLRATGSGQEAASGEPGSIDPAAGENGHRGAERRIVRRSCLRSSMPCMPVVSQAGNQVTWNHYR
Ga0265731_102832	Ga0265731_1028321	F011845	PGFTVRFSDPSACGRSLCSQMPGLNRSSLAITAFQQETGHSSKRVYAARPHRTQHRAGAGISVRPFARSQRRFRHHCEVDVPDLYLRFPVGNPRESVRFLAPSLRSVSRPNRGDINARNPFSALVSDAPDLSPVSTPLQVFFRKPSGSKRSTGSISGNPPYPTLDSSVRPAASSYDSATDCSGVTQVETRLVRLDYR
Ga0265731_102861	Ga0265731_1028611	F089654	LLSSAKKMSRARGTIERPVCMRTFALRPDGSDDRRSLAIATFQSATGHSNLRVLNELHILPEPETRYGLSLAHNDAFATIARSMFLACTFISLSNICANPFDPELFRSVRFRGRYGATSLPNTRFPRRSPTLPIYPRSPLPFRSFGKPSGSKCSTGSPCGKPVLARHPIAISSPPLPLAIPPRISASNSLRPA
Ga0265731_102870	Ga0265731_1028701	F034933	SMTGRESQAMSAEQSAGKAGREVKGAERSELEAEGQVSGTK
Ga0265731_102882	Ga0265731_1028822	F010404	MRPFTLLQRSPALRQIPAAGSTFLAYIFKAALEFQLTRSASHSRPRLAFFRLTELDHCESPVANFLF
Ga0265731_102919	Ga0265731_1029191	F055457	MTNLTIHPRSRVNAPGLHLQSSPETSPDPFGLTLPPPFGLLLPSGMRSPRETRCPTRSQDPPFVFEPSLPSRISRPFGIKALSPIPNSEACLCELPDLPSLPVALKIITYHHALRINVPDPLLPARLTV
Ga0265731_102928	Ga0265731_1029281	F007032	MVLAYYFALWLPGSHARSAFRLHRRNRLAPTPAASLPQTRCAFAGQLIRLLSPSPLPSGSFRSLGIKAFNGRRRRPVRLPNPPDLRSLPDARSIASLSFGSSSAIRYVSGDLLFL
Ga0265731_103045	Ga0265731_1030451	F009043	VPSDLISQPDPPPACTALSLAIRNAGCCPFGSALLSLESNVSMPPGSPADFPEWSRHLEAAFHSPKTTVRLRTAISRSKFPTYSFDALPGTRQARSVSDSPTRSGLPQPAQDPHQKPVARLLSGSPSRSLDLHSPSGPFGPFRIKAFNPIPGYEAHLPNTPDGLSLPGLGSILLVPMPDHRSRLVSRSAACCST
Ga0265731_103049	Ga0265731_1030491	F096679	GTASLRKRSGPGALIRSQKLAIDWGCGERGEIGRIRKAGRSAAISVERFDPEGPKSPKGEWRLVAQSGEPFEEAVTGPKQRSSPDRGEPVGVVELKGRTDSGTDRRRREVAGQEL
Ga0265731_103050	Ga0265731_1030501	F014631	DPQDRSLSDRHARPELGIRIGCDVGPLLPAAGLIQPRIVALVLVRCPSR
Ga0265731_103087	Ga0265731_1030871	F004452	VCRKALILGQRNRPRGSETAKHPALLNAMLCAVHAGGEQGWESGHLE
Ga0265731_103113	Ga0265731_1031131	F049346	LRTAECLAVLLPRDGFRRPGINVFRHTAASFLNGADRSKRPFPRPQRLPPLRGLHSGVKGPGLLLRDQPARFTARSAFSSPAFTGLPQMMAASSLQARYGSTRRLARLLPLSPLPSGILTSLGIKAFNRFRRFAARLPIPPDFLSLPAAGSISRDGYGSPFQDRYVSGGSLFL
Ga0265731_103118	Ga0265731_1031181	F030679	MFAAESPLPSSKLKTLKRPSNFRSPSGLSSFQIVALSQRLNLRSLPLRAARFPFAPRKRQLLLITKALSDHRSRSATVRQIYC
Ga0265731_103123	Ga0265731_1031231	F007032	MVPACYFALSLPERYARSTLWLRRLNRLAPIPAVSRPQARYAPPRQLTRLLSPSPLPSRKFPSLGIEAFNGRRRRPVRLPNPPDLRSLPDALSIARLGAGSSSAVRYVSRDLLF
Ga0265731_103141	Ga0265731_1031411	F001380	PGFTVRFSDPSACGRSLCNKMLRINSSSLSAAAFQHAAGHSNQHILVGLSTLPEPESRYGLSLAHNDAFATIARSMFLACTFVSTSKTFAKPFDSRLFRSVRFRGRTGATSTPETRFPLHSSILRVRPRSPLPFRPSCENPPDQSVRPVQNPETRLTRRPIVPYSPLLPLAIPLRISA
Ga0265731_103149	Ga0265731_1031491	F031388	VSREAAESVERFDPEGCKNPGGEWRQRKQLRGPARRVATGLKRRSCPQLGQTSEGSGAEGGPGGKSSWKVAKWQVRTVDPGMEALEREQPSRARERPSRVTGSVEERDAVWPEGIDPEAEKSTLGERNGEALSTS
Ga0265731_103157	Ga0265731_1031571	F004452	VCREASILGQRNRPKGSETAEHSALLNALLCTVHAGGELGWELDHLE
Ga0265731_103188	Ga0265731_1031881	F018180	MPAVFFSTSPAFWKVNEACPLSDPSRPGRFFVTPFSAFSFGWPLSGPPLSSAPCWRTVATVYPLGNCDSLKPETVLSYLTRLGAVSHRPSSLSPFFAFTDSARTLPEELVNPASAILPCGFLLEESCQPAWPDFSPVTWDYP
Ga0265731_103207	Ga0265731_1032071	F034577	FRAASLVAGMHGTEPRTMKRRTISPPDSTATVFAGYGFIALGRAACIFITGPFARAGVFLARSGFRLRRFRSGVIGSRLALRSLTNRLPLLVRPFGSATCHWLAPAAGDIHASDPLHSCRFVLPAARPISTPLQEFSLPLDQSVRLVTRPSGPPSRSARSSFAPRSPFYF
Ga0265731_103225	Ga0265731_1032251	F003050	MESAKAAAVAGEGKAVTSERSSFGLSCGAPESVEAVTAKPVAGEQTGKAHGAPERGAQYGCMPVVSSAGNRVT
Ga0265731_103237	Ga0265731_1032371	F065302	YDSATRLHADVRSAARCPGLTACRSPSLLFSLRRVIAISASTPLVLIGHSILPEPESRYGLSLAHNDAFATIARSTFLACTFGSLSETLANPFDSWLFRSVRFRGRTGATSMPGTRYPRQSPIFLIFRRSPLPLRSSFENPPDQSVQPVPFQETRLAKRSIAHHSPLLPLSIPHRITA
Ga0265731_103286	Ga0265731_1032861	F033046	LTGAARSVDPKRKKFRSGEHKDQGARPPRLHNFNRACREEVELLD
Ga0265731_103299	Ga0265731_1032991	F014264	AGSSGSGTVIRRAYVIRDYFWRGGERRKIGQLARVSLTVWKKAERYEP
Ga0265731_103302	Ga0265731_1033021	F072370	QPACTARTWHPDNGVTLGPLLPTAGFIQQRIKALVRVRCPVPVETRFSIRPFALRQRRFTLRQTSAAGSTFLACIFETIPKFFLARSVSNSRPRLAFLWPPEVRSLLVTRCQVRFRNSAPVVRPPLPVGIFQSLRIVAPSLIPNAEACLCESPDFPSLPAALE
Ga0265731_103329	Ga0265731_1033291	F024561	VAPGQRIAKSDGRPGANGADADTESQTCLHLVRELASANVSPSELRGLTRRFSRRKALDGPAMRPKIPLAVENGVGKLAAPRGCA
Ga0265731_103350	Ga0265731_1033501	F075760	GQHRSSPACTALSMALGRAGRVAFPLHDNRFRRLSLHRLKARRITLPDGTVRSRRRFPRPQRFPLTRIPFRGYWSPPDASLACKPANFTRSVFWLRYLPLVCPSGRRHPRLKPVALLPICFSGRAANLHSPAGVFAPFGSKRSTGYPAFRSTFQIRPIFVRSPQPFYF
Ga0265731_103365	Ga0265731_1033651	F005410	NNSTSSRHARLKLRNPGEACVLVLILPVAEFLPPRISAPGHASRLTPDRNPLLRTTIRSLETTTRFRATITRSKLLAYPFGSTLRSRRTRSTTSLLHAIWLAPLSANSTRATRCPVPSQRPRLFFSSPLPLGVFGPLPIKAFKLSTSREAHRIGPPDVFRSPLPTVFKRPAADQCSRLVTSRSAYCLTN
Ga0265731_103397	Ga0265731_1033971	F029356	MTTLILNPRGKDGGRPPARVAGRGEATTRRLDRLPGETPGTDVRKTSAEAEA
Ga0265731_103402	Ga0265731_1034021	F022652	SRVHGTIDRTTRMLSVRSAAKCALSFVRCSPLLPFSLPRVNAANALFGFRTLPEPVSRCGLSLARNDALTPFRGQCSRPAPSIPRRTPSRIRSISGSFTPFGFEADPGRYRRPTPVSRADFRRSRVFHPPPLPFGHFRTLRLKAFSEHPTREARLTELRSPFAPRCDFFRFRSGSTLPVRCVPLDYRS
Ga0265731_103404	Ga0265731_1034041	F027219	MNKTNLLLSTAVGLAFVVAGSSAMAVGQKHTLPGNAKAHTAINFAKAPFKRPLHQDHGKPNHLKARQTIDTWGATTVALLGGFATEDAATTVNCLKACRVVTENTAEFLSYYSYNQVGICPMVDGYFTNGSCYFSGALSAKDLYRNETNQTNLAVGSGTHTLQTYLYTTAPAYLGHFANDYHI
Ga0265731_103421	Ga0265731_1034211	F012875	PGFTARLSEPPACSALDPRPDTPDSTFAARRRRFSACAGSVQQMFPQRIYIRPEPETRNGLSLARNDAFATIPRSTFLACPFESTYKLCADPLDQRLSARFGFEAVTGRIHHLRPVIHASLIRSHDATPSPLPFGRFGPPDQSVQRATSQEARLTGHPICISLPVALSFDCASDQCSKLRFALLGYRS
Ga0265731_103520	Ga0265731_1035201	F018722	MLPATAVARMEGGAAPAAATLSPVARDYPSRALEGFFRPSRCDC
Ga0265731_103535	Ga0265731_1035351	F003050	MESAKAGAVAGEGKVVTSERSSFGSLSCGAPERFEAVTAKTVAGEQTGRAHGAPKRDAQYGCMPVVSKAG
Ga0265731_103567	Ga0265731_1035671	F005410	LALVLPATEFLPFRIKAPVRASRLTPDRNPPLGMTFRSLETTARFRATFPRSILLAYPFGSTLEFRRTRLTAPLLHATWLAPCSANSSRATRGPVPFERPQLFFSSPLPFRAFTPFLIKAFKLNTSREAHRIGPPDFLRSPLPAGLIDQQRINVPDSLRPVRLIV
Ga0265731_103714	Ga0265731_1037141	F003050	MESAKAEIVAGEEKAVTSERSSFGMISCGAPESVEAVIAKAVAGEQTGKAYGAPKRGAQYGCMP
Ga0265731_103716	Ga0265731_1037161	F025750	MEKADAHRSIDPWPAKTGGGEQRAHVTPSSDAKFR
Ga0265731_103717	Ga0265731_1037171	F003652	ADLLVKTADFYRRSIANYGQFTRTERKPRTKKQLEQRLQTILQEIDSLKTKPAAS
Ga0265731_103759	Ga0265731_1037591	F004473	LNALIRRVEKPEGEWGSAVIARASEIGADNGSGVRNSPGFGFETEPSGGALDRTGTRRYIGVETKEQGGSVDLVMVAKASLRASERPFRVSGSGWMQVLKTRLVR
Ga0265731_103761	Ga0265731_1037611	F103993	VPSRTPAPSQALFQVVTGLKLPGLLGLQATPVAVASQSARC
Ga0265731_103823	Ga0265731_1038232	F008027	MGQIKILVANYGGKDVTAEAKQQHKKDKHFTANNGAFGDPLPNVPKFLHVIYSYNGVLGSVSIPEGQKFEPHPPALVVLGALYGKADVTDKVKTLGPSFSVENAHFGDPNPGIFKNFTVAYVKNGDLHTLALKEHDKVNL
Ga0265731_103901	Ga0265731_1039011	F058583	GMLGVRSAANLSLNLRTAARRRCFSTCAGSVPRSILKLKSLRRSWKLETAFRSLATTFAHHCEVNVPDLLLRFHTENPAEPVRSRTPPLRSVFEAEPGRILRPLPVALRRFPALLRFHSISTPLEAHLQSPPDQSVQPSSSRGSLPDEIPACPSLPSAHSFRMLTSDHRS
Ga0265731_103957	Ga0265731_1039571	F009017	HATVLSIAFQIAVRLACPLHGHRFGGYRFNAFTRAAALYPKRDRSLVTAFPSPATAPAFADSIPGSMVLACYFAVSLAGFHARSVFRLRRRNWFAPIPAASTLQTRCTFAGNLIRLLSPSPLPSRSFSSLGIKAFNGRHRRPVRLPNPPDLRSLPAAISIARWRLRIIVHGSLRFRRLAV
Ga0265731_103982	Ga0265731_1039821	F062337	VGVRPPARPAITTDSHLALSFSSAGLTASGSHRLLLQQLACAGCCCNPQLALAVATFCHTGDVLPTRIGCSALRLYRFRLTRFAPCASTSGWAFDAPLTSTEPCIAGKPSMSIPYPPVRASSGSASLTTFDLRRLLQSLAQPAIPLRLSPQVSPSGWADGDLPTLIGFSFHQPFRQPTP
Ga0265731_104048	Ga0265731_1040481	F089744	VKIGLNSINWRLYALLKAFGCRIISDSYRHGDTSIYQQLLIIYPITGVCTGVELVG
Ga0265731_104140	Ga0265731_1041401	F048323	YFDSLTGITESESGESSEELKITGRPELHKNEKFERK
Ga0265731_104159	Ga0265731_1041591	F093040	MFTTAMRLAGAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARPP
Ga0265731_104174	Ga0265731_1041741	F029355	PCSPRACNRTEHCVSKRRAPCLSAPRQPVWRSPLQRFQARRSLSPKLNRSLVTAFPSPATAPAFADSIPGSKVPACYFAVSLAGFDARSAIRLHCRNWFAPIPAASTPQARCTSARKLIRPLSPSPLPSGIFRSLGIKAFNGRCCRPVRLPNPPDLRSLPAAASITRLAADHRLRS
Ga0265731_104179	Ga0265731_1041791	F030627	VSDRFCGDLLPARARLGPLSVRHFLRIASGRRFCCGSFRRSNHPTGWHGGFPAGRPWDFAAERRKIAPTDEGRRTLPALPFPGPAPRIGLASSAVTGSIDLPWVQCTGVEGLSPRDPVTSLAATLTPIAHPAF
Ga0265731_104218	Ga0265731_1042181	F004183	MKRLRGANEDRAIPEGGPNGCEVSQGFDLEGVKTPKGERRLAAQPAERAGKECNGFEAWMQPEAGANQRLAAEPKSRTGRKTGKRLSEVVGQDH
Ga0265731_104235	Ga0265731_1042351	F092391	RRLRFRGPHFLISAATGRGTKELAQAVMGFLEEQRAREAHAREAPAGDTAA
Ga0265731_104275	Ga0265731_1042751	F079435	PGFTVRLSEPPACSVIDPQQKASDSGFAARRHRFSACAGSVQRTLSQEHLFTGAGNPGRPFARSQRRFRHHCEVDAPDLPFYFPARRLHRLVRSRTPCPKPVIGCFFWHSRNSSRHPLPFGSLEPSGSKRSTGAATRSSPLLNVRLSFAPRRLLFR
Ga0265731_104301	Ga0265731_1043011	F059538	PAVRLQLSLPLLPLAAPVSNLRLASAALPPARPRANLPARIGVVSLGSVSGKCSAFAAYYALPIDWLLTFQLALASCLQLGLRLLPTHIWRCPSARQVSQFPVLTGYCCNN
Ga0265731_104369	Ga0265731_1043691	F040634	MHGTEHRISDCRAYSPQAPRSLAYPASASSPLDAPQLIFPKRDRSLVAAFPSPRTPSACADSTLRSMVLACYFAHSLAVRPARSAFWLPRQTLVGPSFRRHPRLKPVAFCTGPLCQLCRQVPLPFRSFRSLRIKALPGFATVRSAFRNCPIFVRSPQPFLL
Ga0265731_104461	Ga0265731_1044611	F079435	GFTVRLSEPPACSVFDPQQKVSDSGFAARRHRFSACAGSVQRTLPQEHLSTGAGNPGRPFARSQRRFRHHCEVEAPDLPFYFPARRLHRLARLRTPCPKPVIGCFFQHSRNSSRHPLPFGSLEPSGSKRSTGTATRSSPLLNVRLSFAPRRMLFR
Ga0265731_104466	Ga0265731_1044661	F006257	FQVTRFPALLTTGMHGTEHCIGQLWKSRRSAPPRSISLPWAQCFPALRSAAPQRSRSLAAAFPSPATAAAFQRPPFRGQRSRPATSRPPGWFPRPVRLKLPRLHRFAPVWAASSPLARCVSNPPVRSAASSVSTPLRDFYIPRDQSVQQVPPLCGSPSGLARFPLAPRSQVL
Ga0265731_104682	Ga0265731_1046821	F038248	QLNFRLSIGYCIFQLRLFEATSDLRRTLRSVALPSGLLPACAFCRPSSFTFRLTVDLRRPSVFRFCLPSNFRLSSKSDSQRSFRLTVDLRRRSFFRPAFEPISDFRRISHPWTSPSDPPPACASFESSKLCLPTDPWLAPPIRLPALPSCLPPTCADCLPSSSALESTS
Ga0265731_104822	Ga0265731_1048221	F020912	VHQHEAGDSGGLVDKAGPKKDAERRNKVSIRIGKETQPGQGL
Ga0265731_104896	Ga0265731_1048961	F004183	EDRAIPEGGPNGCEASRGFDPEGAKTPGGERRRAAQPAKQAGKKCNGFEAWRQPEAGANQRLAAEPKSRTGRKTGKRVSEVAGRDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300030806: Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences