NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F077325

Metagenome Family F077325

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077325
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 98 residues
Representative Sequence LSEKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKGELPNSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFE
Number of Associated Samples 74
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Archaea
% of genes with valid RBS motifs 35.04 %
% of genes near scaffold ends (potentially truncated) 21.37 %
% of genes from short scaffolds (< 2000 bps) 74.36 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (100.000 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface
(17.949 % of family members)
Environment Ontology (ENVO) Unclassified
(23.932 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(29.915 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 60.16%    β-sheet: 0.00%    Coil/Unstructured: 39.84%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.84
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.104.1.0: automated matchesd2ycaa_2yca0.62576
a.104.1.0: automated matchesd6f0ca_6f0c0.61604
a.104.1.0: automated matchesd3mgxa_3mgx0.61018
a.104.1.1: Cytochrome P450d6l69a_6l690.60978
a.104.1.1: Cytochrome P450d1ueda_1ued0.60892

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF08240ADH_N 37.61
PF03190Thioredox_DsbH 36.75
PF11906DUF3426 0.85
PF07731Cu-oxidase_2 0.85
PF00736EF1_GNE 0.85
PF01142TruD 0.85
PF01037AsnC_trans_reg 0.85
PF04909Amidohydro_2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG1331Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domainsGeneral function prediction only [R] 36.75
COG2092Translation elongation factor EF-1betaTranslation, ribosomal structure and biogenesis [J] 0.85
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.85
COG0585tRNA(Glu) U13 pseudouridine synthase TruDTranslation, ribosomal structure and biogenesis [J] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004019|Ga0055439_10024360All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1484Open in IMG/M
3300004052|Ga0055490_10001567All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis3745Open in IMG/M
3300004064|Ga0055479_10047954All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1460Open in IMG/M
3300004065|Ga0055481_10166498All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus937Open in IMG/M
3300004074|Ga0055518_10005384All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1991Open in IMG/M
3300004075|Ga0055519_10008506All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1361Open in IMG/M
3300004076|Ga0055522_10050386All Organisms → cellular organisms → Archaea810Open in IMG/M
3300004266|Ga0055457_10068691All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus903Open in IMG/M
3300005215|Ga0069001_10048144All Organisms → cellular organisms → Archaea985Open in IMG/M
3300005588|Ga0070728_10243797All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus990Open in IMG/M
3300005589|Ga0070729_10137646All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1453Open in IMG/M
3300005590|Ga0070727_10223298All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1054Open in IMG/M
3300005601|Ga0070722_10031006All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1797Open in IMG/M
3300005609|Ga0070724_10112787All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1173Open in IMG/M
3300005612|Ga0070723_10009800All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis3150Open in IMG/M
3300005783|Ga0078430_100532All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis5709Open in IMG/M
3300005785|Ga0078432_103450All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1352Open in IMG/M
3300005786|Ga0078433_100144All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis2821Open in IMG/M
3300005825|Ga0074476_1451421All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2100Open in IMG/M
3300005825|Ga0074476_1491870All Organisms → cellular organisms → Archaea610Open in IMG/M
3300005825|Ga0074476_1560479All Organisms → cellular organisms → Archaea1568Open in IMG/M
3300005828|Ga0074475_10779157All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus11583Open in IMG/M
3300006420|Ga0082248_10000218All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus7200Open in IMG/M
3300006421|Ga0082247_10000829All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2774Open in IMG/M
3300006421|Ga0082247_10013422All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1099Open in IMG/M
3300006466|Ga0082249_10000021All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus14579Open in IMG/M
3300006467|Ga0099972_10315091All Organisms → cellular organisms → Archaea675Open in IMG/M
3300006467|Ga0099972_13195296All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae2070Open in IMG/M
3300007619|Ga0102947_1001038All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis9413Open in IMG/M
3300007619|Ga0102947_1003763All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis4496Open in IMG/M
3300007757|Ga0102949_1086141All Organisms → cellular organisms → Archaea802Open in IMG/M
3300007757|Ga0102949_1127695All Organisms → cellular organisms → Archaea682Open in IMG/M
3300007764|Ga0102950_1015046All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2137Open in IMG/M
3300008463|Ga0115335_107520All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae2011Open in IMG/M
3300008470|Ga0115371_10589981All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae2398Open in IMG/M
3300008470|Ga0115371_10757152All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1381Open in IMG/M
3300009030|Ga0114950_10467564All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1009Open in IMG/M
3300009102|Ga0114948_10089941All Organisms → cellular organisms → Archaea2022Open in IMG/M
3300009102|Ga0114948_10470860All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae955Open in IMG/M
3300009488|Ga0114925_10434838All Organisms → cellular organisms → Archaea911Open in IMG/M
3300009488|Ga0114925_10664296All Organisms → cellular organisms → Archaea742Open in IMG/M
3300009488|Ga0114925_11150769All Organisms → cellular organisms → Archaea568Open in IMG/M
3300009499|Ga0114930_10375377All Organisms → cellular organisms → Archaea663Open in IMG/M
3300009515|Ga0129286_10062902All Organisms → cellular organisms → Archaea1028Open in IMG/M
3300009515|Ga0129286_10281512All Organisms → cellular organisms → Archaea593Open in IMG/M
3300009788|Ga0114923_10153000All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1641Open in IMG/M
3300009788|Ga0114923_10303331All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1163Open in IMG/M
3300009788|Ga0114923_10533818All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae876Open in IMG/M
3300009788|Ga0114923_10650805All Organisms → cellular organisms → Archaea794Open in IMG/M
3300009788|Ga0114923_10657113All Organisms → cellular organisms → Archaea790Open in IMG/M
3300009788|Ga0114923_10703405All Organisms → cellular organisms → Archaea764Open in IMG/M
3300009788|Ga0114923_10782685All Organisms → cellular organisms → Archaea724Open in IMG/M
3300009788|Ga0114923_11154794All Organisms → cellular organisms → Archaea599Open in IMG/M
3300010392|Ga0118731_102885914All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1376Open in IMG/M
3300010392|Ga0118731_106711907All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1095Open in IMG/M
3300010392|Ga0118731_110935739All Organisms → cellular organisms → Archaea952Open in IMG/M
3300010392|Ga0118731_115220231All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1598Open in IMG/M
3300010430|Ga0118733_100375768All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2815Open in IMG/M
3300010430|Ga0118733_104121803All Organisms → cellular organisms → Archaea779Open in IMG/M
3300011112|Ga0114947_10232408All Organisms → cellular organisms → Archaea1229Open in IMG/M
3300014262|Ga0075301_1042450All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp. b1853Open in IMG/M
3300020230|Ga0212167_1078496All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus11917Open in IMG/M
3300020230|Ga0212167_1244049All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1307Open in IMG/M
3300020231|Ga0212168_1082817All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus7242Open in IMG/M
3300020232|Ga0212226_104420All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota9935Open in IMG/M
3300020234|Ga0212227_1312828All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis6026Open in IMG/M
3300022201|Ga0224503_10043144All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1353Open in IMG/M
3300022206|Ga0224499_10187012All Organisms → cellular organisms → Archaea706Open in IMG/M
3300022209|Ga0224497_10004464All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus7489Open in IMG/M
3300022209|Ga0224497_10351660All Organisms → cellular organisms → Archaea558Open in IMG/M
3300022213|Ga0224500_10071151All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1356Open in IMG/M
3300022218|Ga0224502_10206614All Organisms → cellular organisms → Archaea754Open in IMG/M
3300022226|Ga0224512_10170285All Organisms → cellular organisms → Archaea1140Open in IMG/M
3300022307|Ga0224507_10063718All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae1454Open in IMG/M
3300022413|Ga0224508_10000713All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus31867Open in IMG/M
3300022413|Ga0224508_10070707All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2355Open in IMG/M
3300022413|Ga0224508_10096791All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1973Open in IMG/M
3300022413|Ga0224508_10111272All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1825Open in IMG/M
3300022413|Ga0224508_10381976All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus890Open in IMG/M
(restricted) 3300024059|Ga0255040_10321710All Organisms → cellular organisms → Archaea649Open in IMG/M
(restricted) 3300024062|Ga0255039_10155994All Organisms → cellular organisms → Archaea938Open in IMG/M
(restricted) 3300024062|Ga0255039_10159990All Organisms → cellular organisms → Archaea927Open in IMG/M
3300024265|Ga0209976_10076085All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1761Open in IMG/M
3300024265|Ga0209976_10164535All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1179Open in IMG/M
3300024265|Ga0209976_10415467All Organisms → cellular organisms → Archaea713Open in IMG/M
(restricted) 3300024340|Ga0255042_10212475All Organisms → cellular organisms → Archaea607Open in IMG/M
3300024353|Ga0209979_1070846All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1545Open in IMG/M
3300024432|Ga0209977_10324314All Organisms → cellular organisms → Archaea738Open in IMG/M
(restricted) 3300024521|Ga0255056_10002701All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis5975Open in IMG/M
(restricted) 3300024521|Ga0255056_10022950All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis2280Open in IMG/M
(restricted) 3300024521|Ga0255056_10051422All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1605Open in IMG/M
(restricted) 3300024521|Ga0255056_10063161All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1467Open in IMG/M
(restricted) 3300024521|Ga0255056_10111526All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1142Open in IMG/M
(restricted) 3300024521|Ga0255056_10126332All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1080Open in IMG/M
(restricted) 3300024521|Ga0255056_10185245All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus908Open in IMG/M
(restricted) 3300024521|Ga0255056_10227430All Organisms → cellular organisms → Archaea826Open in IMG/M
(restricted) 3300024521|Ga0255056_10528803All Organisms → cellular organisms → Archaea553Open in IMG/M
3300025550|Ga0210098_1026089All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus903Open in IMG/M
3300025959|Ga0210116_1008496All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus1838Open in IMG/M
3300025970|Ga0210081_1000066All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus24209Open in IMG/M
3300025976|Ga0210093_1021404All Organisms → cellular organisms → Archaea748Open in IMG/M
3300025976|Ga0210093_1037054All Organisms → cellular organisms → Archaea613Open in IMG/M
3300026007|Ga0210124_1127031All Organisms → cellular organisms → Archaea818Open in IMG/M
3300026122|Ga0209926_1052083All Organisms → cellular organisms → Archaea707Open in IMG/M
3300026144|Ga0209954_1002552All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus3438Open in IMG/M
3300027820|Ga0209578_10233599All Organisms → cellular organisms → Archaea868Open in IMG/M
3300027845|Ga0209271_10000716All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus11479Open in IMG/M
3300027845|Ga0209271_10424619All Organisms → cellular organisms → Archaea522Open in IMG/M
(restricted) 3300027872|Ga0255058_10105106All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp. b11347Open in IMG/M
(restricted) 3300027872|Ga0255058_10365619All Organisms → cellular organisms → Archaea698Open in IMG/M
(restricted) 3300027997|Ga0255057_10650193All Organisms → cellular organisms → Archaea512Open in IMG/M
(restricted) 3300028043|Ga0233417_10240216All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus805Open in IMG/M
3300028599|Ga0265309_10147627All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis1437Open in IMG/M
3300028600|Ga0265303_10144475All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis1786Open in IMG/M
3300031539|Ga0307380_10063257All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis3987Open in IMG/M
3300031539|Ga0307380_10584418All Organisms → cellular organisms → Archaea964Open in IMG/M
3300031566|Ga0307378_10335468All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis1413Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface17.95%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands12.82%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment11.11%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater10.26%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment9.40%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment9.40%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.98%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine5.13%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.42%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)3.42%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment3.42%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.56%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment1.71%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.85%
SedimentEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Sediment0.85%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.85%
SedimentEngineered → Biotransformation → Unclassified → Unclassified → Unclassified → Sediment0.85%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004064Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1EnvironmentalOpen in IMG/M
3300004065Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2EnvironmentalOpen in IMG/M
3300004074Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004075Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004076Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004266Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300005215Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005590Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2EnvironmentalOpen in IMG/M
3300005601Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1EnvironmentalOpen in IMG/M
3300005609Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1EnvironmentalOpen in IMG/M
3300005612Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2EnvironmentalOpen in IMG/M
3300005783Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IXEnvironmentalOpen in IMG/M
3300005785Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten VIEnvironmentalOpen in IMG/M
3300005786Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IEnvironmentalOpen in IMG/M
3300005825Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.184_BBBEnvironmentalOpen in IMG/M
3300005828Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBIEnvironmentalOpen in IMG/M
3300006420Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IVEnvironmentalOpen in IMG/M
3300006421Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IEnvironmentalOpen in IMG/M
3300006466Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten VIEnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300007619Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D2_MGEnvironmentalOpen in IMG/M
3300007757Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D1_MGEnvironmentalOpen in IMG/M
3300007764Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MGEnvironmentalOpen in IMG/M
3300008463Deep sea sediment microbial communities from the Gulf of Mexico ? control with no oil addedEngineeredOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009030Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaGEnvironmentalOpen in IMG/M
3300009102Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaGEnvironmentalOpen in IMG/M
3300009488Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaGEnvironmentalOpen in IMG/M
3300009499Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaGEnvironmentalOpen in IMG/M
3300009515Microbial community of beach aquifer sediment core from Cape Shores, Lewes, Delaware, USA - CF-2EnvironmentalOpen in IMG/M
3300009788Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaGEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300011112Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaGEnvironmentalOpen in IMG/M
3300014262Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1EnvironmentalOpen in IMG/M
3300020230Deep-sea sediment microbial communities from the Mariana Trench, Pacific Ocean - CR02EnvironmentalOpen in IMG/M
3300020231Deep-sea sediment microbial communities from the Mariana Trench, Pacific Ocean - CR04EnvironmentalOpen in IMG/M
3300020232Deep-sea sediment microbial communities from the Mariana Trench, Pacific Ocean - CR05EnvironmentalOpen in IMG/M
3300020234Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N074EnvironmentalOpen in IMG/M
3300022201Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21EnvironmentalOpen in IMG/M
3300022206Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_24EnvironmentalOpen in IMG/M
3300022209Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13EnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022218Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13EnvironmentalOpen in IMG/M
3300022226Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13EnvironmentalOpen in IMG/M
3300022307Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_13EnvironmentalOpen in IMG/M
3300022413Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21EnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024265Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024340 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_5EnvironmentalOpen in IMG/M
3300024353Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024432Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024521 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_1EnvironmentalOpen in IMG/M
3300025550Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025970Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025976Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026007Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026122Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026144Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027845Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027872 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9EnvironmentalOpen in IMG/M
3300027997 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0055439_1002436023300004019Natural And Restored WetlandsMTEKGNWTEKDEITIHAIIVNMLNQKQVLINIGTETPLPSSLGIKNSNEYVLGLFSGIVINLFANYWIGEHEKGLTQEDLKYLYQKISFFSKDILSGLFG*
Ga0055490_1000156723300004052Natural And Restored WetlandsMSEKGNWTEKDEVTIHAIIVNMLNQKKIFQDIGEKTILPSSFDIQNFKDYVLGLFTGIVINLFANYWIGEHESGLTEEDLSYLYHKISLSHEEILSGLFS*
Ga0055479_1004795413300004064Natural And Restored WetlandsTIMAIIVNMINQKEMLKDLGVKSELQKSFKIENTKEYVLGLFSGIVINLFANYWVGEHEAGLRPEDLSYLYHKISQSSELITKGLFE*
Ga0055481_1016649813300004065Natural And Restored WetlandsMSGKGNWTEKDEATIMAIIVNMINQKEMLKDLGVKSELQKSFKIENTKEYVLGLFSGIVINLFANYWVGEHEAGLRPEDLSYLYHKISQSSELITKGLFE*
Ga0055518_1000538413300004074Natural And Restored WetlandsMSDKGNWTEKDEVAIHAIIVNMLNQKQMFQDLGKTTILPNSFNIKNSNEYILGLFTGIVINLFANYWVGEHESGLSPEDLSYLYYKISLFREEIVSGLFD*
Ga0055519_1000850623300004075Natural And Restored WetlandsMTSRGNWTEKDEATITAIIVNMINQKQMFQDLGKKNELNNSFGIQNPREYTLGLYTGIVINLFANYWIGEHEAGLQPEDLDYLYQKISSYGDVILQGLFE*
Ga0055522_1005038623300004076Natural And Restored WetlandsMINKGNWTEKDEVTIHAIIVNMINQKQMLQDLGKTTILPNSFNIKNTNEYILGLFTGIVINLFANYWIGEHESGLTPEDLSYLYYEISLFHEEIVSGLFD*
Ga0055457_1006869133300004266Natural And Restored WetlandsMSKKNNWNEKDKASIKAIIVNMINQKHVFRDLGENGDLAKSFEIQNSREYVLGIFTGIVINLFANYWVGEHEEGLRPEDLDYLYHKIATSYDLIRTGLFE*
Ga0069001_1004814433300005215Natural And Restored WetlandsMSEKGNWTEKDEATITAIIVNMINQKEMFNDLGEKSELPTSFKIKNTKEYVLGLFTGIVINLFANYWVGEHESGLRPEDLTYLYHKISLSNDMITKGLFE*
Ga0070728_1024379723300005588Marine SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHTIALSHDMIIDGLFE*
Ga0070729_1013764633300005589Marine SedimentEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHKIALSHDMIVDGLFE*
Ga0070727_1022329833300005590Marine SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHKIALSHDMIIDGLFE*
Ga0070722_1003100623300005601Marine SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHKIALSHDMIVDGLFE*
Ga0070724_1011278723300005609Marine SedimentMPEKGNWSEKDEASIKAIIVNMINQKQMFRDLGEKGELPHSFNVQNSREYVLGIFTGIVINLFANYWVGEHESGLLPEDLRYLYHKIALFNDMIEEGLFE*
Ga0070723_1000980073300005612Marine SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYH
Ga0078430_10053293300005783SedimentMSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGETGELHDSFAIQNSREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE*
Ga0078432_10345033300005785SedimentMSRKGNWTEKDEATIKAIVVNMINQKQMFRELGETGELHDSFDVKNSREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE*
Ga0078433_10014433300005786SedimentMSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGEIGELHDSFDVKNSKEYVLGLFTGIVINLFANYWVGEHEAGLLPEDWAYLYHKIALFHDMIVEGLFE*
Ga0074476_145142133300005825Sediment (Intertidal)MSEKGNWTEKDEVTIKAIIVNMINQKKMLYNLGRETELPNSFDIKNPNEYILGLFTGIVINLFANYWIGEHESGLSPEDLAYLYHKISLSRDEIVSGLFD*
Ga0074476_149187023300005825Sediment (Intertidal)IKAIIVNMINQKHMFRDLGEKGELPKSFKIQNSQEYVLGIFTGIVINLFANYWVGEHEKGLLPEDLEYLYHQIAISYDMIKTGLFE*
Ga0074476_156047923300005825Sediment (Intertidal)MINKGNWTEKDEVTIHAIIVNMINQKQMFQDLGKTTILQNSFNIKNSNEYILGLFTGIVINLFANYWIGEHESGLTPEDLSYLYYEISLFHEEIVSGLFD*
Ga0074475_10779157133300005828Sediment (Intertidal)MMFKTSYLIKKMSKKNNWNEKDEASIKAIIVNMLNQKQMFRDLGEKGELPKSFKIQNSQEYVLGIFTGIVINLFANYWVGEHEKGLLPEDLEYLYHQIAISYDMIKTGLFE*
Ga0082248_10000218113300006420SedimentMSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIAFFHDMIVEGLFE*
Ga0082247_1000082943300006421SedimentMSRKGNWTEKDEATIKAIVVNMINQKQMFRELGEIGELHDSFDVKNSKEYVLGLFTGIVINLFANYWVGEHEAGLLPEDWAYLYHKIALFHDMIVEGLFE*
Ga0082247_1001342213300006421SedimentEATIKAIIVNMINQKQMFRDLGEKGELPNSFNIQNSREYVLGIFTGIVINLFANYWVGEHEAGLLPEDLGYLYQKIALYHEMISDGLFG*
Ga0082249_10000021143300006466SedimentMSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE*
Ga0099972_1031509113300006467MarineLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIAISHDMIVDG
Ga0099972_1319529613300006467MarineEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHTIALSHDMIIDGLFE*
Ga0102947_100103893300007619SoilLSKKGNWTEKDEATIKAIIVNMINQKQMFRNLGEKGELPSSFNVQNSREFVLGIFTGIVINLFANYWVGEHEAGLLPEDLDFLYHKIALSNELILVGLFE*
Ga0102947_100376373300007619SoilMSGKGNWTEKDEATIMAIIVNMINQKEMLKDLGGKSELQNSFKIENPKEYVLGLFSGIVINLFANYWVGEHEAGLRPEDLSYLYHKISESSDLITKGLFE*
Ga0102949_108614123300007757SoilLSKKGNWTEKDEATIKAIIVNMINQKQMFRNLGEKGELPSSFNVQNSREFVLGIFTGIVINLFANYWVGEHEAGLLPEDLDFLYHKIALSNELIFVGLFE*
Ga0102949_112769523300007757SoilMSGKGNWTEKDEATIMAIIVNMINQKEMLKDLGGKSEMQNSFKIENPKEYVLGLFSGIVINLFANYWVGEHEAGLRPEGLSYLYHKISESSDLITKGLFE*
Ga0102950_101504613300007764SoilMSGKGNWTEKDEATIMAIIVNMINQKEMLKDLGGKSELQNSFKIENPKEYVLGLFSGIVINLFANYWVGEHEAGLQPEDLS
Ga0115335_10752013300008463SedimentMSEKGNWTEKDEVSIKAIIVNMINQKQMFRDLGEKGELPRSFNIQNSREYILGIFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIALSQKMIVEGLFE*
Ga0115371_1058998123300008470SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPTSFNVQNSREYILGIFTGIVINLFANYWVGEHEVGLLPEDLGFLYHKIAVNHEMILVGLFE*
Ga0115371_1075715223300008470SedimentLSEKGNWTEKDEATINAVIVNMINQKQMFRDLGEKGELPNSFRIQDSKEYVLGIFTGIVINLFANYWVGEHESGLLPEDLRYLYHKIALSHDMIVDGLFE*
Ga0114950_1046756413300009030Deep SubsurfaceMSRKGNWTETDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNHREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE*
Ga0114948_1008994133300009102Deep SubsurfaceMSRKGNWTEKDEATIKAITVNMINQKQMFRDLGETSELHDSFGVQNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLNYLYHKIALFHDMIVEGLFE*
Ga0114948_1047086033300009102Deep SubsurfaceDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNHREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE*
Ga0114925_1043483823300009488Deep SubsurfaceMSEKGNWTEKDEATISAIIVNMINQKQMFRDLGEKNELPDSFHIQNSKEYILGIFTGIVINLFANYWVGEHEVGLLPEDLSYLYHKIASSHGMIVEGLFE*
Ga0114925_1066429613300009488Deep SubsurfaceMSKKGNWTEKDEVTIKAIIVNMINQKKMFKDLGEKSELPTSFNIQNSREYTLGIFTGIVINLFANYWVGEHQEGLLIEDLEYLYHKIGLSQEMIVEGLFE*
Ga0114925_1115076913300009488Deep SubsurfaceMSDKGNWTEKDEVTIKAIIVNMINQKQMFRDLGEKTELPDSFNIQNSKEFTLGIFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIALSHDMIIEGLFE*
Ga0114930_1037537713300009499Deep SubsurfaceMSKKSNWTEQDEVTIKAIIVNMINQKKMFGDLGEKSELPNSFKIQNSREYILGIFTGIVINLFANYWVGEHQSGLLTEDLEYLYHKIALSKEMIIQGLFE*
Ga0129286_1006290223300009515SedimentMSEKGNWTEKDEATIQAIIVNMINQKQMFRDLGEKGELPNSFNVQNSREYVLGIFTGIVINLFANYWVGEHEAGLLPADLLYLYHKIALFHDMIVDGLFE*
Ga0129286_1028151213300009515SedimentGNWNEQDEASIKAIIVNLINQKQMFRNLGEKGELPQTFKIKNSKEYVLGIFTGIAINLFANYWVGENETGLLPDDLEYLYHKISTFHDMIKEGLFE*
Ga0114923_1015300023300009788Deep SubsurfaceMSRKGNWTEKDEATIKAIIVNMINQKQMFRDLGETSELHDSFNVQNSREYVLGLFTGIVINLFANYWVGEHEAGLFPEDLEYLYHKIALFHDMIVEGLFE*
Ga0114923_1030333113300009788Deep SubsurfaceMSGKGNWTENDEATIKAIVVNMINQKQMFRDLGEKSELHGSFGIQNTREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLEYLYHKIASFHEMIVEGLFE*
Ga0114923_1053381813300009788Deep SubsurfaceNMINQKPMFRDLGEKGELPSSFNIQNSRDYILGIFTGIVINLFANYWVAEHEAGLLPEDLGYLYHQIALSQKMITEGLFE*
Ga0114923_1065080523300009788Deep SubsurfaceMSEKTNWTEKDEVTIKAIIVNMINQKQMFRDLGEKSELPHSFNIENSREYILGMFTGIVINLFANYWVAEHEAGLLPEDLGYLYHKIALSQKMISEGLFE*
Ga0114923_1065711313300009788Deep SubsurfaceEKMSRKGNWTENDEATIKAIVVNMINQKQMFRDLGETGDLHDSFGVQNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLDYLYHKIASFHDMIVEGLF*
Ga0114923_1070340513300009788Deep SubsurfaceMSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVQNSREFVLGIFTGIVINLFANYWVGEHETGLLPEDLAYLFHKIALFHDMIVEGLFE*
Ga0114923_1078268513300009788Deep SubsurfaceDEVTIKAIIVNMINQKQMFRDLGEKSELPHSFNIQNSREYILGIFTGIVINLFANYWVAEHEAGLLPEDLGYLYHKISLSQKMIAEGLFE*
Ga0114923_1115479423300009788Deep SubsurfaceMSKKGNWTEKDEVTIKAIIVNMINQKKMFRDLGEKSELPTSFNIQNSKEYTLGIFTGIVINLFANYWVGEHQEGLLIEDLEYLYNKIALSQEMIVEGLFE*
Ga0118731_10288591423300010392MarineMTKKGNWNEKDEATIKAIIVNMINQKQMFRELGEKGELPRSFNIQNSQEYVLGIFTGIVINLFANYWIGEHEAGLLPDDLQYLYHQIAISHDMIVEGLFK*
Ga0118731_10671190733300010392MarineLSEKGNWTEKDEATIIAIIVNMINQKQMFRDLGEKGELPKSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFG*
Ga0118731_11093573923300010392MarineLSEKGNWTEKDEATISAIIVNMINQKQMFRDLGEKGELPKSFGIKDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPVDLEYLYHKIALSHDMIVDGLFD*
Ga0118731_11522023123300010392MarineLSEKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKGELPNSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFE*
Ga0118733_10037576843300010430Marine SedimentMTKKGNWNEKDEATIKAIIVNMINQKQMFRDLGEKGELPHSFNIQNSQEYVLGIFTGIVINLFANYWVGEHEAGLLPDDLQYLYHQIAISHDMIVEGLFK*
Ga0118733_10412180313300010430Marine SedimentLSEKGNWTEKDEATIIAIIVNMINQKQMFRDLGEKGELPKSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHKIALSHDMIVDGLFG*
Ga0114947_1023240833300011112Deep SubsurfaceMSRKGNWTEKDEATIKAITVNMINQKQMFRDLGETSELHDSFDVQNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLNYLYHKIALFHDMIVEGLFE*
Ga0075301_104245013300014262Natural And Restored WetlandsMTEKGNWTEKDEITIHAIIVNMLNQKHVLKNIGTETTLPSSLGIKNSNEYVLGLFSGIVINLFANYWIGEHEKGLTQEDLKYLYQKISFFSKDILSGLFG*
Ga0212167_1078496213300020230SedimentMSRKGNWTEKDEATIKAITVNMINQKQMFRDLGETSELHDSFDVQNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLNYLYHKIALFHDMIVEGLFE
Ga0212167_124404923300020230SedimentMSRKGNWTETDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNHREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE
Ga0212168_108281723300020231SedimentMSRKGNWTEKDEATIKAITVNMINQKQMFRDLGETSELHDSFGVQNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLNYLYHKIALFHDMIVEGLFE
Ga0212226_10442023300020232SedimentMSRKGNWTETDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNHREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIIEGLFE
Ga0212227_131282883300020234SedimentMSRKGNWTETDESTIKAIVVNMINQKQMFRDLGETGELHDSFDVKNHREYVLGLFTGIVINLFANYWVSEHEAGLLPEDLAYLYHKIALFHDMIVEGLFE
Ga0224503_1004314423300022201SedimentLSEKGNWTEKDESSINAIIVNMINQKQLFRDLGEKGELPKSFNIQNSREYVLGIFTGIVINLFANYWVGEHEAGLFPDDLGYLYHKIALSRDMIVDGLFE
Ga0224499_1018701223300022206SedimentMSEKGNWTEKDEATIKAIIVNMVNQKQMFRDLGESGELPNSFKVENNKDYVLGIFTGIVVNLFANYWVGEHEAGLLPEDLTYLYHKIALSGDEIIEGLFE
Ga0224497_1000446443300022209SedimentMTKKGNWNEQDEASIKAIIVNLINQKQMFRNLGEKGELPQTFKIQNSREYVLGIFTGIAINLFANYWVGEHEAGLLPDDLEYLYHKISTFHDMIIDGLFE
Ga0224497_1035166013300022209SedimentSINAIIVNMINQKQLFRDLGEKGELPKSFNIQNSREYVLGIFTGIVINLFANYWVGEHEAGLFPDDLGYLYHKIALSRDMIVDGLFE
Ga0224500_1007115133300022213SedimentMINKGNWTEKDEVTIHAIIVNMINQKQMLQDLGKTTILPNSFNIKNTNEYILGLFTGIVINLFANYWIGEHESGLTSEDLSYLYYEISLFHEEIVSGLFD
Ga0224502_1020661413300022218SedimentMTSRGNWTEKDEATITAIIVNMINQKQMFQDLGKKNELNNSFGIQNPREYTLGLYTGIVINLFANYWIGEHEAGLQPEDLDYLYQKISSYGDVILQGLFE
Ga0224512_1017028523300022226SedimentMSNHGNWTEKDEATINAIIVNMINQKRIFRDLGENSNLSTSFKIQNSKEYVLGIFTGIVINLFANYWISEHQSGLSSGDLDYLYHKISISHKMISEGLFE
Ga0224507_1006371823300022307SedimentMTKKGNWNEQDEASIKAIIVNLINQKQMFRNLGEKGELPQTFKIQNSREYVLGIFTGLAINLFANYWVGEHEAGLLPDDLE
Ga0224508_10000713203300022413SedimentLSEKGNWTEKDESTINAIIVNMINQKQMFRDLGEKGELPTSFNVQNSREYILGIFTGIVINLFANYWIGEHEAGLLPEDLGYLYHKIALNHEMILSGLFD
Ga0224508_1007070733300022413SedimentMSKRGNWTEKDESTIKAIIVNMINQKQIFTDLGEGGKLPKSFKIQNTKDYVLGIFTGIVVNLFANYWIAEHEAGLLPEDLDYLYHKISLSSNMIIEGIFE
Ga0224508_1009679133300022413SedimentMSKKGNWNEKDEASIQAIIVNMINQKQMFRDLGEKGELPKAFHVQNPREYALGIFTGIVINLFANYWVGEHEAGLLPDDLEYLYHKISTFHDMIIEGLFE
Ga0224508_1011127233300022413SedimentLSKTGNWTEKDESTINAIIVNMINQKQMFRDLGEKGELPTSFNVQNSREYVLGIFTGIVINLFANYWIGEHEAGLLPEDLGYLYHKIAENHKMILVGLFE
Ga0224508_1038197623300022413SedimentMPDRGNWSEKDEASIKAIIVNMINQKQMFRDLGENGVLPSSFKIQNSKEYVLGLFTGIVINLFANYWVGEHEAGLLPEDLGYLYHKIALSKDMIEKGLFE
(restricted) Ga0255040_1032171013300024059SeawaterLSEKGNWTEKDEATIIAIIVNMINQKQMFRDLGEKGELPNSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFG
(restricted) Ga0255039_1015599413300024062SeawaterLSEKGNWTEKDEATIIAIIVNMINQKQMFRDLGEKGELPKSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIIDGLFG
(restricted) Ga0255039_1015999023300024062SeawaterMSEKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKGELPDSFKIQNSREYVLGIFTGIVINLFANYWVGEHESGLLPDDLSYLYHKIASSHEMILKGLFE
Ga0209976_1007608523300024265Deep SubsurfaceMSRKGNWTEKDEATIKAIIVNMINQKQMFRDLGETSELHDSFNVQNSREYVLGLFTGIVINLFANYWVGEHEAGLFPEDLEYLYHKIALFHDMIVEGLFE
Ga0209976_1016453533300024265Deep SubsurfaceMSEKTNWTEKDEVTIKAIIVNMINQKQMFRDLGEKSELPHSFNIENSREYILGMFTGIVINLFANYWVGEHEAGLLPEDLGYLYHKIALSQKMISEGLFE
Ga0209976_1041546713300024265Deep SubsurfaceMSDKGNWTEKDEVTIKAIIVNMINQKQMFRDLGEKTELPDSFNIQNSKEFTLGIFTGIVINLFANYWVGEHETGLLPEDLTYLYHKIALSHGMIIEGLFE
(restricted) Ga0255042_1021247513300024340SeawaterLSEKGNWTEKDEATIIAIIVNMINQKQMFRDLGEKGELPKSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFE
Ga0209979_107084633300024353Deep SubsurfaceLSEKGNWTEKDEATINAVMVNMINQKQMFRDLGEKGELPSSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIIDGLFE
Ga0209977_1032431413300024432Deep SubsurfaceMSEKGNWTEKDEATISAIIVNMINQKQMFRDLGEKNELPDSFHIQNSKEYILGIFTGIVINLFANYWVGEHEVGLLPEDLSYLYHKIASSHGMIVEGLFE
(restricted) Ga0255056_1000270173300024521SeawaterMSDKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKTELPNSFNIQNSKEYTLGIFTGIVINLFANYWVGEHEAGLLPVDLAYLYHKIALSHDMIIEGLFE
(restricted) Ga0255056_1002295033300024521SeawaterLSEKGNWTEKDEAAIKAIIVNMINQKQMFRDLGEKGELPNSFNIQNSREYVLGIFTGIVINLFANYWIGEHEAGLLPEDLGYLYHTIALSHDMIVDGLFE
(restricted) Ga0255056_1005142223300024521SeawaterMSEKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKGELPNSFNIQNSREYVMGIFTGIVINLFANYWVGEHEAGLLPEDLGYLYHKIALSRDVIIDGLFE
(restricted) Ga0255056_1006316123300024521SeawaterMSDKGNWTEKDEVTIKAIIVNMINQKQMFRDLGEKTELPTSFNIQNSKEFTLGIFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIALSHDMIIEGLFE
(restricted) Ga0255056_1011152633300024521SeawaterDEVTIKAIIVNMINQKPMFMDLGEKGELPSSFNIQNSRDYILGIFTGIVINLFANYWVAEHEAGLLPEDLGYLYHQIALSQKMITEGLFE
(restricted) Ga0255056_1012633233300024521SeawaterEKDEATIKAIIVNMINQKQMFRDLGEKGELPNSFNVQNSRDYVLGIFTGIVINLFANYWVGEHEAGLLPEDLEYLYHAIALSHDMIVDGLFE
(restricted) Ga0255056_1018524523300024521SeawaterLSEKGNWTEKDEATINAVIVNMINQKQMFRDLGEKGELPNSFRIQDSKEYVLGIFTGIVINLFANYWVGEHESGLLPEDLRYLYHKIALSHDMIVDGLFE
(restricted) Ga0255056_1022743023300024521SeawaterMSEKTNWTEKDEVSIKAIIVNMINQKQMFRDLGEKGELPHSFNIQNSREYILGIFTGIVINLFANYWVGEHKAGLLPEDLAYLYHKIALTHNMIVEGLFE
(restricted) Ga0255056_1052880313300024521SeawaterLSEKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKGELPNSFNIQNSREYVLGIFTGIVINLFANYWVGEHEAGLLPEDLGYLYQKIALYHEMISDGLFG
Ga0210098_102608913300025550Natural And Restored WetlandsMSKKNNWNEKDKASIKAIIVNMINQKHVFRDLGENGDLAKSFEIQNSREYVLGIFTGIVINLFANYWVGEHEEGLRPEDLDYLYHKIATSYDLIRTGLFE
Ga0210116_100849623300025959Natural And Restored WetlandsMSEKGNWTEKDEVTIHAIIVNMLNQKKIFQDIGEKTILPSSFDIQNFKDYVLGLFTGIVINLFANYWIGEHESGLTEEDLSYLYHKISLSHEEILSGLFS
Ga0210081_1000066133300025970Natural And Restored WetlandsMSDKGNWTEKDEVAIHAIIVNMLNQKQMFQDLGKTTILPNSFNIKNSNEYILGLFTGIVINLFANYWVGEHESGLSPEDLSYLYYKISLFREEIVSGLFD
Ga0210093_102140423300025976Natural And Restored WetlandsMTSRGNWTEKDEATITAIIVNMINQKQMFQDLGKKNELNNSFGIQNPREYTLGLYTGIVINLFANYWIGEHESGLTPEDLSYLYYEISLFHKEIISGLFD
Ga0210093_103705423300025976Natural And Restored WetlandsHAIIVNMLNQKQMFQDLGKTTILPNSFNIKNSNEYILGLFTGIVINLFANYWVGEHESGLSPEDLSYLYYKISLFREEIVSGLFD
Ga0210124_112703123300026007Natural And Restored WetlandsMSGKGNWTEKDEATIMAIIVNMINQKEMLKDLGVKSELQKSFKIENTKEYVLGLFSGIVINLFANYWVGEHEAGLRPEDLSYLYHKISQSSELITKGLFE
Ga0209926_105208313300026122SoilLSKKGNWTEKDEATIKAIIVNMINQKQMFRNLGEKGELPSSFNVQNSREFVLGIFTGIVINLFANYWVGEHEAGLLPEDLDFLYHKIALSNELIFVGLFE
Ga0209954_100255243300026144SoilLSKKGNWTEKDEATIKAIIVNMINQKQMFRNLGEKGELPSSFNVQNSREFVLGIFTGIVINLFANYWVGEHEAGLLPEDLDFLYHKIALSNELILVGLFE
Ga0209578_1023359933300027820Marine SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHKIALSHDMIIDGLFE
Ga0209271_10000716113300027845Marine SedimentLSEKGNWTEKDEATINAIIVNMINQKQMFRDLGEKGELPKSFGIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLQYLYHKIALSHDMIVDGLFE
Ga0209271_1042461913300027845Marine SedimentMPEKGNWSEKDEASIKAIIVNMINQKQMFRDLGEKGELPHSFNVQNSREYVLGIFTGIVINLFANYWVGEHESGLLPEDLRYLYHKIALFNDMIEEGLFE
(restricted) Ga0255058_1010510613300027872SeawaterMSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGEIGELHDSFDVKNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLAYLYHK
(restricted) Ga0255058_1036561923300027872SeawaterMSEKGNWTEKDEVSIKAIIVNMINQKQMFRDLGEKGELPPSFNVKNSREYILGIFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIALSQNMIIEGLFE
(restricted) Ga0255057_1065019313300027997SeawaterPILKRKMSDKGNWTEKDEATIKAIIVNMINQKQMFRDLGEKTELPNSFNIQNSKEYTLGIFTGIVINLFANYWVGEHEAGLLPVDLAYLYHKIALSHDMIIEGLFE
(restricted) Ga0233417_1024021613300028043SedimentNWTEKDEITIHAIIVNILNQKKMLKNLGTNTPLPSSFGIKNSDEYILGLYTGIVINLFANYWIGEHEAGLTKEDLEYLYQKISFFRNEILSGLLE
Ga0265309_1014762723300028599SedimentLSEKGNWTEKDEATINAIIVNMINQKQTFRDLGEKGELPKSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFE
Ga0265303_1014447513300028600SedimentSKSVRKKLSEKGNWTEKDEATINAIIVNMINQKQTFRDLGEKGELPNSFRIQDSKEYVLGIFTGIVINLFANYWVGEHEAGLLPEDLRYLYHKIALSHDMIVDGLFE
Ga0307380_1006325733300031539SoilMSKKGNWNEKDEASIKAIIVNMINQKQMFRDLGEKGELPISFQVQNSQEFILGIFTGIVINLFANYWVGEHEAGLLPEDLEYLYHQIAIFHDMIVTGLFE
Ga0307380_1058441813300031539SoilMSKKSNWTEQDEVTIKAIIVNMINQKKMFGDLGEKSELPNSFKIQNSREYILGIFTGIVINLFANYWVGEHQSGLLTEDLEYLYHKIALSQEMIIQGLFE
Ga0307378_1033546813300031566SoilMSKKSNWTEQDEVTIKAIIVNMINQKKMFGDLGEKSELPNSFKIQNSREYILGIFTGIVINLFANYWVGEHQSGLLTEDLEYLYHKIALSQEMIIRGLFE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.