Sample 3300006420

3300006420: Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IV

Overview

Basic Information
IMG/M Taxon OID	3300006420 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114881 \| Gp0119453 \| Ga0082248
Sample Name	Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IV
Sequencing Status	Permanent Draft
Sequencing Center	Center for Biotechnology (CeBiTec), Bielefeld Univeristy
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	1099714353
Sequencing Scaffolds	69
Novel Protein Genes	78
Associated Families	65

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	4
All Organisms → cellular organisms → Bacteria → Proteobacteria	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1
Not Available	30
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Candidatus Magnetoglobus	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Thiomicrospira → Thiomicrospira microaerophila	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus chungangensis	1
All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Deep-Sea Sediment Bacterial And Archaeal Communities
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Unclassified → Unclassified → Sediment → Deep-Sea Sediment Bacterial And Archaeal Communities

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine benthic biome → marine benthic feature → deep marine sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline)

Location Information
Location	Fram Strait
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	2500
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000057	Metagenome / Metatranscriptome	3033	Y
F000567	Metagenome / Metatranscriptome	1020	Y
F001135	Metagenome / Metatranscriptome	767	Y
F001186	Metagenome / Metatranscriptome	754	Y
F002549	Metagenome / Metatranscriptome	549	Y
F002599	Metagenome / Metatranscriptome	544	Y
F002748	Metagenome	533	Y
F007035	Metagenome	359	Y
F008577	Metagenome / Metatranscriptome	331	Y
F010737	Metagenome	300	N
F013096	Metagenome / Metatranscriptome	274	Y
F017046	Metagenome / Metatranscriptome	243	Y
F017656	Metagenome	239	Y
F020359	Metagenome / Metatranscriptome	224	Y
F022199	Metagenome / Metatranscriptome	215	Y
F024655	Metagenome / Metatranscriptome	205	Y
F025751	Metagenome	200	Y
F028309	Metagenome	192	Y
F028812	Metagenome	190	Y
F029446	Metagenome / Metatranscriptome	188	Y
F032288	Metagenome / Metatranscriptome	180	Y
F033954	Metagenome	176	N
F035454	Metagenome	172	Y
F035975	Metagenome	171	N
F036276	Metagenome	170	Y
F037257	Metagenome / Metatranscriptome	168	Y
F038691	Metagenome / Metatranscriptome	165	Y
F039177	Metagenome	164	Y
F045106	Metagenome / Metatranscriptome	153	N
F045107	Metagenome	153	Y
F047069	Metagenome / Metatranscriptome	150	Y
F048324	Metagenome	148	Y
F049645	Metagenome / Metatranscriptome	146	N
F049655	Metagenome / Metatranscriptome	146	Y
F052198	Metagenome	143	Y
F052606	Metagenome	142	Y
F054936	Metagenome	139	N
F058159	Metagenome	135	N
F062779	Metagenome	130	Y
F066809	Metagenome / Metatranscriptome	126	Y
F070205	Metagenome / Metatranscriptome	123	Y
F071262	Metagenome / Metatranscriptome	122	N
F071263	Metagenome	122	Y
F072372	Metagenome	121	Y
F077325	Metagenome	117	Y
F080066	Metagenome	115	Y
F081360	Metagenome	114	Y
F082716	Metagenome	113	Y
F082810	Metagenome	113	Y
F084882	Metagenome	112	Y
F087217	Metagenome	110	Y
F087396	Metagenome / Metatranscriptome	110	Y
F090490	Metagenome	108	Y
F090618	Metagenome / Metatranscriptome	108	N
F092086	Metagenome	107	Y
F093897	Metagenome	106	Y
F093968	Metagenome	106	Y
F100046	Metagenome	103	Y
F101197	Metagenome	102	Y
F103290	Metagenome	101	N
F103291	Metagenome	101	Y
F103292	Metagenome	101	Y
F103884	Metagenome	101	Y
F105216	Metagenome / Metatranscriptome	100	Y
F105217	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0082248_10000006	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	33282	Open in IMG/M
Ga0082248_10000012	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	26479	Open in IMG/M
Ga0082248_10000072	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	12694	Open in IMG/M
Ga0082248_10000218	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	7200	Open in IMG/M
Ga0082248_10000912	All Organisms → cellular organisms → Bacteria → Proteobacteria	4060	Open in IMG/M
Ga0082248_10001472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3381	Open in IMG/M
Ga0082248_10001843	All Organisms → cellular organisms → Bacteria → Proteobacteria	3105	Open in IMG/M
Ga0082248_10002122	All Organisms → cellular organisms → Bacteria	2929	Open in IMG/M
Ga0082248_10003042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2551	Open in IMG/M
Ga0082248_10004113	All Organisms → cellular organisms → Bacteria → Proteobacteria	2263	Open in IMG/M
Ga0082248_10005292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	2045	Open in IMG/M
Ga0082248_10007195	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
Ga0082248_10008318	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
Ga0082248_10009147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1650	Open in IMG/M
Ga0082248_10009559	Not Available	1618	Open in IMG/M
Ga0082248_10013162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Candidatus Magnetoglobus	1418	Open in IMG/M
Ga0082248_10013867	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1388	Open in IMG/M
Ga0082248_10014176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1376	Open in IMG/M
Ga0082248_10015502	Not Available	1325	Open in IMG/M
Ga0082248_10019869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1192	Open in IMG/M
Ga0082248_10020960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1165	Open in IMG/M
Ga0082248_10022821	All Organisms → Viruses → Predicted Viral	1125	Open in IMG/M
Ga0082248_10023160	Not Available	1118	Open in IMG/M
Ga0082248_10024208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	1097	Open in IMG/M
Ga0082248_10029458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
Ga0082248_10032798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	971	Open in IMG/M
Ga0082248_10032965	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
Ga0082248_10033573	Not Available	962	Open in IMG/M
Ga0082248_10039758	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
Ga0082248_10041243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	887	Open in IMG/M
Ga0082248_10042922	All Organisms → cellular organisms → Archaea	874	Open in IMG/M
Ga0082248_10044921	Not Available	860	Open in IMG/M
Ga0082248_10045784	Not Available	854	Open in IMG/M
Ga0082248_10051465	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
Ga0082248_10055055	Not Available	801	Open in IMG/M
Ga0082248_10057153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	791	Open in IMG/M
Ga0082248_10060088	Not Available	778	Open in IMG/M
Ga0082248_10061733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
Ga0082248_10061990	All Organisms → Viruses	770	Open in IMG/M
Ga0082248_10062941	Not Available	766	Open in IMG/M
Ga0082248_10064778	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
Ga0082248_10067286	Not Available	749	Open in IMG/M
Ga0082248_10068723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	744	Open in IMG/M
Ga0082248_10069256	Not Available	743	Open in IMG/M
Ga0082248_10070301	Not Available	739	Open in IMG/M
Ga0082248_10071289	Not Available	736	Open in IMG/M
Ga0082248_10073069	Not Available	730	Open in IMG/M
Ga0082248_10076540	Not Available	719	Open in IMG/M
Ga0082248_10116209	Not Available	512	Open in IMG/M
Ga0082248_10264329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Thiomicrospira → Thiomicrospira microaerophila	525	Open in IMG/M
Ga0082248_10338087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus chungangensis	518	Open in IMG/M
Ga0082248_10374488	Not Available	531	Open in IMG/M
Ga0082248_10389086	Not Available	505	Open in IMG/M
Ga0082248_10411347	Not Available	519	Open in IMG/M
Ga0082248_10457885	Not Available	554	Open in IMG/M
Ga0082248_10475529	Not Available	539	Open in IMG/M
Ga0082248_10682680	Not Available	502	Open in IMG/M
Ga0082248_10875336	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	502	Open in IMG/M
Ga0082248_10995033	Not Available	548	Open in IMG/M
Ga0082248_11454150	Not Available	502	Open in IMG/M
Ga0082248_11626990	Not Available	519	Open in IMG/M
Ga0082248_11639854	Not Available	546	Open in IMG/M
Ga0082248_11740853	Not Available	528	Open in IMG/M
Ga0082248_11779975	Not Available	514	Open in IMG/M
Ga0082248_11825855	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
Ga0082248_12339005	Not Available	527	Open in IMG/M
Ga0082248_12506463	Not Available	518	Open in IMG/M
Ga0082248_12632336	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	503	Open in IMG/M
Ga0082248_12638533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	565	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0082248_10000006	Ga0082248_1000000646	F082716	MINKKDLRQMPFTFIIAPILLVALTSVVAITYGEMIEEKELIVTLSCPDLKKYTENQFIESKLYFGHDVYLNYAKELYRDFC*
Ga0082248_10000012	Ga0082248_1000001215	F105217	MESGLNTNKERNLLIDSIQYRIFYSEINLDKIPTSISLDVFPNDKISAEIVIDGFLFYANGSLDLVFAEINKKLSLGLAPNQINPSDIFHALEEKNTNEAMAMIEEFQKYFQKPIHEEKIISDQEFNDGLNRYGYDIIGFHAEYENRNQVKYQHFWNRASSRLWEIRNQQKLESYDSLLKNAGTIGKDKPRNYLRVKLVDDDHPAIFWDSAHYENPKRYYTNILYLVKQFIDKILEILKSHYIL*
Ga0082248_10000072	Ga0082248_100000724	F093897	MGIAITGLVVGFVLLYDIQQEKEVQNIWIQKIPTQCNDVWDEEYNEFYEINPEMRDATKEESKEFVEGIIKNHYEKHGINILDLSLELNVYEGARCEACNCLGWDRLSIKIPENELDLISDSEGWEPKG*
Ga0082248_10000218	Ga0082248_1000021811	F077325	MSRKGNWTEKDEATIKAIVVNMINQKQMFRDLGETGELHDSFDVKNSREYVLGLFTGIVINLFANYWVGEHEAGLLPEDLAYLYHKIAFFHDMIVEGLFE*
Ga0082248_10000912	Ga0082248_100009122	F029446	MLIILILITGIVVGILPGLLKLDKMFSITSIAVGFVGALVGALLGFGDAPLFLKYPFLNEITLMVAVSFLFVFIKVFVTRKRKVP*
Ga0082248_10001472	Ga0082248_100014723	F035454	MSKSAKQTDMIDVVGKAIATSDGGRFGADRARYRRLAVAAIRPLAKPTEAMVDAAYEAVWFDAYWAINNRRDFKRAMKAMIAKATGGVPD*
Ga0082248_10001843	Ga0082248_100018432	F081360	MGFLLLLAVVALGTIAWLLFRIDAKLQAIGDMIHDASRPEEQRRLAAEKHDET*
Ga0082248_10002122	Ga0082248_100021223	F062779	MISDSEMDDIDAAILQAGFEVDDFSIVDVEDDELPLKDDESTVIVQNGITGTVTVHRISTDEATTYSAGHLSTWVSEFELDLHEVKFGEP*
Ga0082248_10003042	Ga0082248_100030423	F092086	MNRYVLLLLTVMALSACSGADDVLENINDVSVPDQLTGCVEGNKDGETCDKAACVADDESDCKSWVKACKKFDHVADVRNGIDTCERKEVLPDS*
Ga0082248_10004113	Ga0082248_100041132	F071263	MDRIRDLCDLARDVDESLESLIRFGALGELTIYVIAHGWSGRSKDGTEDTLKVPVFLLAEDLHQSLNAQVTRVTQVRRPSDDEVVTLDEPVDVPRGDHYVSAEEAERFSREHALTLKSGSETPSYLNTNHEFYSTELAIAVRAWMALFADGSFDPGNKTTRQRIELWLRARKPNLKPNAEQRIASLVNPDPAKGGGAARTPNK*
Ga0082248_10005292	Ga0082248_100052923	F103292	MNLRWRFETQLPYGRFVAVVSEDGDGFSAEIEGKIVASPRTEDARIRDQKITDQYYGPESVRAHSLEALRRAVDEKIENDIGPVNKWTADPS*
Ga0082248_10007195	Ga0082248_100071952	F029446	MLILFILVTGIAVGVLPGILRLDRAFSVTNIVVGFVGALVGAFLGFGDAPLFLKYPFLNEITLMVAVSFLFVSIKVSVTRKRRVP*
Ga0082248_10008318	Ga0082248_100083182	F087217	MMRFSSALIAAASLAFAFLVMPGAGHAAELPEGVTIDLIAEYPSKTAGIEKVLFRKIALKPGASWSFTVPAQSLCQAIKGELEVEDHTAGKTVVFKAGDRWDTSPGHEVTLSNKGTVDHEHLFYTLIVKK*
Ga0082248_10009147	Ga0082248_100091473	F032288	MTIKYLATALAMTIGLLFTVSTAHAAQPLDVDCDLLADTNDDVNIFLDTMTNIQFDNLGDLVSSAILDDAVFAQLSALVTLFSGGAINFDSASQAVSTNAACGLIPQLIGNVND*
Ga0082248_10009559	Ga0082248_100095593	F013096	MTVTEVVTGGDNAVGLSTLSHTNAVAVYEPDASGIQDNAGLNDCPAVNEPVIHASETVTPLLSWTCTKYAND
Ga0082248_10013162	Ga0082248_100131623	F087396	SSEIAAWSWESLLLDGPTLEHSRILPYVLMVTCVIERRKVSREELLTALRRSMRQRSIGRQPHREYVLRYLNQHPP*
Ga0082248_10013867	Ga0082248_100138672	F082716	MIHKKDIKLMPFTFIIAPILLVSLTIVVVTTYGDMIEEKELITSLSCPELKTYTQNQIIESKLYFGHDVFLIYAEELYYGYC*
Ga0082248_10014176	Ga0082248_100141762	F020359	MAVSKRTGGRKAPEEFWSKVLAAPKVKRILEKRGFSPEAFQRDYEADSSRGPRSPKRPSRAQIDAVEAFQKTGDFEAFKQSLSTTSSAVANSALRRVVQFKATGGTKTIRRRGGAGAE*
Ga0082248_10015502	Ga0082248_100155023	F058159	MDLANRDKIIELLQSEINKTQDSVMGYLEETQDVQKENEFLEGVTKDYKRYHKYIVDEKERERKQLEMLMGYLDKVVQEAGLSAEMANKARFQQNKILGEMDNIKGELDRITGEHPQQPQTNMRNI*
Ga0082248_10019869	Ga0082248_100198694	F082810	TQLAELKTIPNNQPVETSEVSADVVKTAALPSNINPKTGLTYIDDALLSNEEKAMRLRQKGMTA*
Ga0082248_10020960	Ga0082248_100209601	F093968	MTHRDGFPRFSARSAWRGDAGHRKARATPSESLGKPP
Ga0082248_10022821	Ga0082248_100228211	F049655	MNYYFNEETIEYFHNRSYLVEDPDMLYDEMWNFVNVDYEVGDNESVDDAVKALIEVVTSHRNM*
Ga0082248_10022821	Ga0082248_100228213	F008577	MELTWEETKEIANRLYDIIGYNFHDAMYSVIWEREGNEEESKLTLMSEEEVSDEDILAIKEQLKRIL*
Ga0082248_10023160	Ga0082248_100231601	F037257	HASTAQLQTIAAELKIMANSWEKFGPRIAINGQAVLPPKLRMAPTELSNKRATGTTSKRHNSTTYI*
Ga0082248_10024208	Ga0082248_100242081	F025751	MDSETRMWERLWVILAEDDWDQIVYVYGVDRSGRTIKPFLAKWALHAELLESIRNEFGAGLYHLMIRQGKTMR
Ga0082248_10029458	Ga0082248_100294581	F032288	VKKRLVGAVLGAMLVVGLIPAAAHAARPLDVDCDLLAATNEAVNDFLDSEGIQFDNLGDLISSAVLDDAVFDQLSALVLLFSGGEIEFTSASQGVSTNAKCGLALQVVDNIRD*
Ga0082248_10029997	Ga0082248_100299972	F052606	NTITQMRISTTETSKENVVAFLTYIIGKPILLGQGDQISQFGHYTLVSYAVDPAEPTFYIADLTYIGGNGVIAQEGTQYTVIDFKISGGGDVNLKQNFNASNQWVINNTTGKAEPSVTLIDNGGDEIYGAVEYTNATTITVDFNSNIAGSSILN*
Ga0082248_10032798	Ga0082248_100327982	F048324	MKKHIFTVLMLTLVAACEPQPTAVEDIDFEKLEGMQAECAKRAASAAMESFSNDTEWTDLLSVEDAAEAVATITDATQLELQSCITDVYLMGVEDGRVLEREVY*
Ga0082248_10032965	Ga0082248_100329652	F101197	VAGVRWLSVRWAARAAALAGLPALTSCAGVVSRSRIISFLEAVQRPFDLNDRTWLGIPAALPAHFLVSAFLAGALAWFWRPKAAGILLGILILAKEAVDLMIIALYQPVTWANVSGSVADVLVSVAGASLGLWINTRVRPGVVEDD*
Ga0082248_10033573	Ga0082248_100335731	F017046	MIYGTPLKEIIKKGWDVFPPWLMALNIFAIAIGLAVILFV*
Ga0082248_10039758	Ga0082248_100397582	F045107	MSGGSIMGLPLPTMAELLRFAEEAKAQRKATAEKLLIDRVMTREELIKLCLLSENDVN*
Ga0082248_10041243	Ga0082248_100412432	F103292	MNLRWRFETQVPFGRFIAVVSEDGDGFSAEIEGKFVSSPRTGDVRIRDLTNTDQHYGPESVRAHSLDALRRAVDEKIEIDIGPVNKWTADPG*
Ga0082248_10042922	Ga0082248_100429221	F105217	IDPIQYRIFYAEINLGKVSTAIPLALFPKDKIPSELAIDGFLFYPTGSVDLRFAEINKELNLGLSPNQIHPSDLIEALEGQKTDEAIVMLEVIQKYFQKPIHEEKKISDQEFNEGLNRYGYDIIGFHAEYENREQVKYQHFWNRASSRLWDIRNQQKLESYDSLLKNAGIKGKEKPRYYLRVKLEIDDHPAIYWDSAHYENPKRYFTNILFLVKQFIDRILQILKPRYSADSNV*
Ga0082248_10044921	Ga0082248_100449212	F052198	MNKEELEDKVNELELTLNSLELNAKVVKDDLKKVETQLKNVNKPRLYPSQLDDIRNAIEEVFNQSSFNNVESYDVDFEIDYNNSLALGSIEFNDADNVAEAISDAIEDLFNVIPADED*
Ga0082248_10045784	Ga0082248_100457842	F049645	MKKLFITLSILFTTLTTQAQKQFEGEWVSKTSSHVTTIIASDYAVLKVFNFSFKEDSYIEEKILVQTDYEFTTRLYNSRNGYTAIIKYKMNGDILICEFSGDFHGVVELTKKE*
Ga0082248_10051465	Ga0082248_100514652	F047069	ANTWGSGTSYRCVVPPLVRTGLLAGVGTSGSCDGSFALDLNALWCPSCPKPAKNPGAGAVAQAQLWYRDPSNTSNQTTGLSDAVEFSVCPR*
Ga0082248_10055055	Ga0082248_100550552	F072372	MWHIEPKNDTWREVHLAHVESLSNRLWLRCNACGHSLTPDPREFAHQHQMDMKTPLLSIARRLKCTHCSARKAHCWPEPY
Ga0082248_10057153	Ga0082248_100571531	F029446	MLILFILVTGIVVGILPGLLKLDKMFSITNIVVGFVGALVGAFLGFGDAPLFLKYPFLNEITLMVAGSFLFVFIKISLTRKRIVP*
Ga0082248_10060088	Ga0082248_100600882	F105216	FLTLSWLAILAAACSDGAPEPWSAAEMNALSKQFGHIAEAYAVVDVCLPMIDANQEAKREVISKIDVRHYSQLSQMNTEAELAKFIAFHRKDGGTDEQAAALDRIYREAHEEAAKLLTSVGDCAETTTDYANTILNTKARPAP*
Ga0082248_10061733	Ga0082248_100617331	F002599	MTPTWAQRKEDLLSDCIVSPDVFNQIVDRLGEFVVPYQHALVCRESSLV*
Ga0082248_10061990	Ga0082248_100619901	F022199	MATKKTSMFTLTERVTISAASTETFATIDLGSYVDVGGRQALQVHSVDFIYQGTSGGESITTAMGGSGFVTVQLTDLNRGGLVFCNDRALVASADLNYDLDGF
Ga0082248_10062941	Ga0082248_100629412	F002549	MLSKLLNLLTGGGTSLIDKAVDIADKFIETPAEKKAFIEKAYNQEIEDRRAARDLGKNKVTPDILTYVTLVIALGLATAVFTDLIDWKNLSEVQKGLITTFSGFFLRTLGDVYGYWFGSSMGSTHKTKDLTKLMRK*
Ga0082248_10064778	Ga0082248_100647782	F029446	MLITFILVTGIVVGILPGLLKLDKMFSITNIVVGFVGALVGAFLGFGDAPLLLKYHFLNEITLMVAVSFLFVFIKVTVTRKRSAP*
Ga0082248_10067286	Ga0082248_100672861	F072372	MWPSQPKNDEWREVNLAHVESLGNRLWLRCNACGHSITPEPREFASDHHLDMRTPLLLIAKRLKCTHCNERKAHCWPEPYGIKLMG*
Ga0082248_10068723	Ga0082248_100687231	F001186	MTPKHSHSTRLSDYIAFMLPWAHGHQLKSIGDYVSAIIEQQTACQAQLARYFGNQEAAVKRLSRLLHNERLDPRLLADAVLLQALHQLPKHGKVRLAIDWTIEDKQHLLVVSLIIGRRAVPIYWRAYDASVLKGRMK
Ga0082248_10069256	Ga0082248_100692562	F002748	MQLILFTLGLALIGFGLFVGVHPEGDLTVGALLMFAGIAQTVYSISVDDES*
Ga0082248_10070301	Ga0082248_100703012	F024655	RQPFHPVGVVARIRGDHPRHQLAGEGGTVKNSMKITLRVCHDGTESVLTAGPAAIVAFERKWGLGIGKAMSEVKVEHLAWLAHQAAWREAKAGNGPAVKPFDDWLDALEDIEAVGEDDDEVPLAGTP*
Ga0082248_10071289	Ga0082248_100712893	F090618	MDNKDYKETLAKQEDLNWDGNTEQEEIEYTYIVDEDRMEKLR
Ga0082248_10073069	Ga0082248_100730691	F071262	MPSRQPSMRSDLQDVLITVARIDERMVTMFNRQEDIEERVNSMDKKIQMISPAVKFGERVFWVLLVVAVGAFFNLQ*
Ga0082248_10076540	Ga0082248_100765402	F054936	MRKKYYKTPLTPRPNGKSGSLGKVADSWDDSDAMPHYTYSKGWWSETKRLVDESYARLVAKGFFDNTSDYWVNRRKTDDRIQ*
Ga0082248_10116209	Ga0082248_101162092	F103291	MDIFGLSPVIATIIIVSVGIVLQNLLSWLKSKENYDTRSALASAIIAFIVGITIIGPQIEAIQNQMLSELSELTIVTSLIASIAGFDILT
Ga0082248_10264329	Ga0082248_102643291	F071263	VFLLPADLLQSMNAEVTTVSQVRRPDDDEYATLDEPVDVARGVHFVSQEEAERFSREHALTLKSTGDTPPYLNPHHDFYSKELAVAVKAWVALFADGSFEKGYKTPRQHIERWLRAGKFDLDENAEQRIATLVNPKTSKKGGTRTTLAE*
Ga0082248_10338087	Ga0082248_103380871	F029446	RDPGTLSSVQLSLNELSRLHVFSGYAASTSSASMLIVFILGTGTIFGILPGLLKLDKTLSIANIAVGCIGALIGTFLGFGTPLLLNYPFLNEITLMVGVSFLFVLIKVLAIRSRKSP*
Ga0082248_10374488	Ga0082248_103744882	F007035	MYYILENCRGSFYTEAMANDEFPSLQAAEKKLAALKELKPNGKFFIVCNVGA*
Ga0082248_10374488	Ga0082248_103744883	F036276	MTTLIIKDKKYKLPFEIKSHSSAMVKRTNGQSGQSVELPCFAACVYDYTMYKTMEMEQLDKK
Ga0082248_10389086	Ga0082248_103890861	F001135	TTMVKRTNGLSGESTELPQFAALVYDHTMYMSMMTEMKDKETKQQPGFSDNQDDWQIVRNGLDFFRRYFAKEYMVLLD*
Ga0082248_10389086	Ga0082248_103890862	F017656	MNYFIHDERDLSPAYVASCRKFLKEISLKLQASSAMKQTQLKGKIKL*
Ga0082248_10411347	Ga0082248_104113471	F038691	MGFHKRHIDNDQVIRIYNDGGIQRIREWYTRGVDALITETGLASQVGSILSDDEWRQLGTVRQDEEIIKI
Ga0082248_10411347	Ga0082248_104113472	F066809	LRGTSITIFWSMITSMKGKGFFAARDFVELMAAFGQELSKVVGQVHTDNQELRDNHSKLAALDTEVNNPDVIIDTDISNYHEAEEQLNSLMNEVDPIVENV*
Ga0082248_10457885	Ga0082248_104578852	F103884	LIVTATTNLTDIKAVLCNPAIYDTIADDNCPNIEDFEPPINDEYLYVGGYVDNEIIGLMVYHEYLDGNKCHVQVLPENRKEHAKQFGEQSLQYRGTRPLYAEIPDLYKNVLDFAILNDFKVIKRIDNGFIKDGVNYTVNVLRYK*
Ga0082248_10475529	Ga0082248_104755291	F032288	MKTSFVSSALAAIACLLLSVSAAHAAPPLDVDCDLLAATNDAVNDFLDGQGVQFENLGDLISSAILDEEVFDQLSALILLFSGGEIDFTSASQAVSTNGKCGLIPQLIDNIRD*
Ga0082248_10682680	Ga0082248_106826802	F070205	MSGLMKELSMEAEEDIRDKIAEALTDYGFTQEDAGNLANSCDIPWKLLHNETTDKYTA
Ga0082248_10734280	Ga0082248_107342802	F080066	MHKELRPEQIDILVGSPAVNGEFTDKVRELDRRLQMNGMQYREWDTLNDRQHEIFTDNLFLDGECAGSVDHYVKGAVASCGCPDTEEELHHHSPVLMREIEKQEDMLPDIKVKIGESLNNLNEFIDLMVEQFGSL
Ga0082248_10875336	Ga0082248_108753361	F010737	MVTTITRTYDSTPTDKTYFSLTDNMSSSSLGNIQTPQGSQRISRIDVAVDAPDTKGFVLACRLLGSNMSEQNLTLAGSCGDVGDAGGTAQFNMIPTNFSVAGVNNIDLQVAFQFTTGTPTASSLS
Ga0082248_10875336	Ga0082248_108753362	F100046	GTNDGRKTLVTAGGIALLGAFARKQFPQLKLGGSKLYFRL*
Ga0082248_10995033	Ga0082248_109950333	F000567	MKESLLKLTQKITTWHEGMFKYLTLKSKTSVFFTWLLVFICLYEIFKHIIIPIFLIWWGFFK*
Ga0082248_11454150	Ga0082248_114541501	F013096	MTRMSTDTGGDNAVGLSTLCQTNTVAVNVPAESDIQDNAGLNDC
Ga0082248_11626990	Ga0082248_116269902	F103290	TGRAYQQGGIVFGELPFGLRQLQAGRPITPSRGYLSQAAGLTLPSAQALSNITPESRDVFFDLAQQAGIPSRAFGQELQTAPPRGTRLPTGRMLPLGRRGVR*
Ga0082248_11639854	Ga0082248_116398541	F084882	LDASALTTTGPGDFCTNLDTSSYVQPVVRKGTKPTGLAIYKVHWDVYDTATNDAVPAATTGTFRTGVFSDLGLTAGVTGAITAPIDTFTVTNDLAVSIMDWWGGGTAAGDPAPKTWLMPSTEVPYVIVRDTIQLVGSISTATSNACTIGVRLECAQISLDMATLNQLLRTQTV*
Ga0082248_11740853	Ga0082248_117408531	F035975	MPKYTITMKETNILIDSGDPYEIYRHMAMWADHYALQYKEYGILPSNVTI
Ga0082248_11740853	Ga0082248_117408533	F033954	MTNKVLEAVREASISIACLYDWLNDTAGIDLSEYQKDIEHIQDQITIIENYLDPFVVAELEEMKDDDA*
Ga0082248_11779975	Ga0082248_117799752	F039177	MKLVILLSLIGGPLYFPFDTTLDCYDQGNEIMESIATYHGPGPKQGWYTDHGXLVYGFYCE*
Ga0082248_11825855	Ga0082248_118258551	F062779	MITVSEMEDFNAAILQAGFEVDDFNIVDLEDDEVPLRDDEPTVTEQHSITDTVTVHRISTDKFIIYSAGHLSTWVTEFEIDLHEGNFGQP*
Ga0082248_11847096	Ga0082248_118470961	F000057	MAQKLNTEFNYRYQVIGDTPWERIKTLKGFLEGRIRAQALEEVGKLKHQAKLSKLNYLKNGGEGLE
Ga0082248_12339005	Ga0082248_123390051	F045106	MKPKNVEFIEEFIEILGGDNFFLCDRIDQDDLFTMQDRLAKLICDHANDGTGVARHLIPLLPNTFEVD*
Ga0082248_12506463	Ga0082248_125064631	F028309	PFTHDWRPGDRVVSIAVRESVADTGLATIQRVLLDRAIVLWDDGEQSEERLQDLIIAGYNESKIVKKAEVYGHQSKDLDLNRNWWGGAINLQEDISSELAINERLIINKMMIAGIPLDIETTKGLKWGNFINEGFAQGS*
Ga0082248_12632336	Ga0082248_126323361	F090490	MAHLITVTNLNEHELLFNLDTVVSMERGSNGNTIVTTRWSRTDIKETLEEVKNLAQKSSLEY
Ga0082248_12638533	Ga0082248_126385332	F028812	MDPDLEKVIRQALEAAQAAGKDHTSQIWLAVQAVQRARPDMNPSEALTAVNLVRRK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300006420: Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IV

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences