NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F053838

Metagenome / Metatranscriptome Family F053838

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F053838
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 52 residues
Representative Sequence MRWDFWSLCVPLIAAHFCASAKTAGRALFFLGVKRDFPTAPAGDMGELVHLSH
Number of Associated Samples 113
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 7.35 %
% of genes near scaffold ends (potentially truncated) 43.57 %
% of genes from short scaffolds (< 2000 bps) 77.14 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Archaea (70.714 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(10.714 % of family members)
Environment Ontology (ENVO) Unclassified
(32.143 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(27.857 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 41.98%    β-sheet: 0.00%    Coil/Unstructured: 58.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF01423LSM 51.43
PF13522GATase_6 16.43
PF13537GATase_7 10.00
PF01472PUA 5.00
PF04472SepF 2.86
PF03367zf-ZPR1 2.14
PF13230GATase_4 2.14
PF12847Methyltransf_18 1.43
PF02769AIRS_C 1.43
PF00085Thioredoxin 1.43
PF02683DsbD 0.71
PF13840ACT_7 0.71
PF13749HATPase_c_4 0.71
PF09183DUF1947 0.71
PF01523PmbA_TldD 0.71
PF13473Cupredoxin_1 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG1799Cell division protein SepF/YlmF, interacts with FtsZCell cycle control, cell division, chromosome partitioning [D] 2.86
COG1779C4-type Zn-finger proteinGeneral function prediction only [R] 2.14
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 0.71
COG2016Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domainTranslation, ribosomal structure and biogenesis [J] 0.71

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.71 %
UnclassifiedrootN/A29.29 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918008|ConsensusfromContig165807All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei809Open in IMG/M
3300000318|WSSedL1CaDRAFT_10091629Not Available563Open in IMG/M
3300001279|JGI20214J14112_1000058All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica13895Open in IMG/M
3300002219|SCADCLC_10008927All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica2395Open in IMG/M
3300002961|JGI11641J44799_10002150All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica6106Open in IMG/M
3300003432|JGI20214J51088_10019197All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica4627Open in IMG/M
3300003432|JGI20214J51088_10070779All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula2441Open in IMG/M
3300003432|JGI20214J51088_10079727All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula2296Open in IMG/M
3300003432|JGI20214J51088_10971392Not Available558Open in IMG/M
3300003541|JGI20214J51650_10089801All Organisms → cellular organisms → Archaea → Euryarchaeota2081Open in IMG/M
3300003541|JGI20214J51650_10142110All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1645Open in IMG/M
3300003541|JGI20214J51650_10420058All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica934Open in IMG/M
3300003852|Ga0031655_10253754All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula661Open in IMG/M
3300003858|Ga0031656_10005806All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica5108Open in IMG/M
3300003860|Ga0031658_1003676All Organisms → cellular organisms → Archaea → Euryarchaeota2721Open in IMG/M
3300003860|Ga0031658_1007307All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1901Open in IMG/M
3300003910|JGI26437J51864_10002534All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei4131Open in IMG/M
3300003910|JGI26437J51864_10016132All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1621Open in IMG/M
3300004481|Ga0069718_10001328All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica890Open in IMG/M
3300004481|Ga0069718_16050198All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1658Open in IMG/M
3300005208|Ga0069003_10009995Not Available1173Open in IMG/M
3300006930|Ga0079303_10308090All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica656Open in IMG/M
3300008944|Ga0115987_1016309All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica786Open in IMG/M
3300009037|Ga0105093_10061954All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1724Open in IMG/M
3300009039|Ga0105152_10128858All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1033Open in IMG/M
3300009053|Ga0105095_10201996All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1089Open in IMG/M
3300009081|Ga0105098_10091347All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1302Open in IMG/M
3300009085|Ga0105103_10157884All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1200Open in IMG/M
3300009085|Ga0105103_10169682All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1158Open in IMG/M
3300009087|Ga0105107_10223489All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1317Open in IMG/M
3300009119|Ga0117938_102059All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1232Open in IMG/M
3300009119|Ga0117938_112218All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica669Open in IMG/M
3300009131|Ga0115027_10090702All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1727Open in IMG/M
3300009146|Ga0105091_10637757Not Available553Open in IMG/M
3300009153|Ga0105094_10152907All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1314Open in IMG/M
3300009157|Ga0105092_10821187Not Available546Open in IMG/M
3300009169|Ga0105097_10560984Not Available641Open in IMG/M
3300009179|Ga0115028_10094811All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1673Open in IMG/M
3300009583|Ga0115598_1096800All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica550Open in IMG/M
3300009587|Ga0115602_1229388All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica640Open in IMG/M
3300009621|Ga0116116_1044029All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1384Open in IMG/M
3300009692|Ga0116171_10012867Not Available6585Open in IMG/M
3300009694|Ga0116170_10474994Not Available674Open in IMG/M
3300009694|Ga0116170_10686760All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon534Open in IMG/M
3300009771|Ga0116155_10016738All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica4036Open in IMG/M
3300010352|Ga0116247_11137298All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica563Open in IMG/M
3300010429|Ga0116241_10780606All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica733Open in IMG/M
3300011340|Ga0151652_13480915Not Available822Open in IMG/M
3300013080|Ga0153913_1100862All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica650Open in IMG/M
3300013088|Ga0163200_1058784All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1160Open in IMG/M
3300014160|Ga0181517_10031005All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei3487Open in IMG/M
3300014204|Ga0172381_11011232All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula613Open in IMG/M
3300014205|Ga0172380_10410986All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1012Open in IMG/M
3300014205|Ga0172380_11152866Not Available545Open in IMG/M
3300014256|Ga0075318_1129781Not Available523Open in IMG/M
3300014258|Ga0075315_1000559All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica3155Open in IMG/M
3300014266|Ga0075359_1000820All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica2973Open in IMG/M
3300014490|Ga0182010_10879388All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica510Open in IMG/M
3300014498|Ga0182019_10251015Not Available1164Open in IMG/M
3300014502|Ga0182021_10000930All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica33143Open in IMG/M
3300017944|Ga0187786_10361725Not Available617Open in IMG/M
3300017975|Ga0187782_10334441All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei1145Open in IMG/M
3300017988|Ga0181520_10119175All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei2212Open in IMG/M
3300017999|Ga0187767_10149568All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica698Open in IMG/M
3300018020|Ga0187861_10471135Not Available519Open in IMG/M
3300018030|Ga0187869_10496659Not Available579Open in IMG/M
3300018060|Ga0187765_10022717All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica3007Open in IMG/M
3300019264|Ga0187796_1641707Not Available523Open in IMG/M
3300019861|Ga0206388_1150725All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula817Open in IMG/M
3300021473|Ga0194043_1267445Not Available550Open in IMG/M
3300021605|Ga0194054_10017930All Organisms → cellular organisms → Archaea → Euryarchaeota2732Open in IMG/M
3300025376|Ga0208494_1017062All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula799Open in IMG/M
3300025812|Ga0208457_1053729All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei831Open in IMG/M
3300025963|Ga0210146_1005329All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1191Open in IMG/M
3300025963|Ga0210146_1013332All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula806Open in IMG/M
3300025978|Ga0210092_1055849Not Available597Open in IMG/M
3300026055|Ga0208003_1004595All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula759Open in IMG/M
3300026060|Ga0208295_1006925Not Available676Open in IMG/M
3300026346|Ga0256812_1007459Not Available570Open in IMG/M
3300026463|Ga0256815_1001784All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1568Open in IMG/M
3300026464|Ga0256814_1019403All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica738Open in IMG/M
3300027715|Ga0208665_10062394All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1106Open in IMG/M
3300027723|Ga0209703_1037716All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales1877Open in IMG/M
3300027731|Ga0209592_1196099All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica712Open in IMG/M
3300027735|Ga0209261_10039597All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1174Open in IMG/M
3300027818|Ga0209706_10148028All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1155Open in IMG/M
3300027818|Ga0209706_10283923Not Available787Open in IMG/M
3300027885|Ga0209450_10075238All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula2169Open in IMG/M
3300027885|Ga0209450_10341238Not Available1087Open in IMG/M
3300027890|Ga0209496_10403646All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula709Open in IMG/M
3300027897|Ga0209254_10379972All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1054Open in IMG/M
3300027899|Ga0209668_10675497Not Available692Open in IMG/M
3300027900|Ga0209253_10432618All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica994Open in IMG/M
3300027902|Ga0209048_10308724All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1106Open in IMG/M
3300027902|Ga0209048_10321975All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1078Open in IMG/M
3300028858|Ga0302216_1160279Not Available519Open in IMG/M
(restricted) 3300029268|Ga0247842_10543642Not Available585Open in IMG/M
(restricted) 3300029286|Ga0247841_10196669Not Available1488Open in IMG/M
(restricted) 3300029286|Ga0247841_10413239All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula885Open in IMG/M
3300029981|Ga0302293_10091913All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1001Open in IMG/M
3300030000|Ga0311337_10084612All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica2499Open in IMG/M
3300030019|Ga0311348_10089138All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica2273Open in IMG/M
3300030114|Ga0311333_10559503All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula943Open in IMG/M
3300031344|Ga0265316_10090691All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica2332Open in IMG/M
3300031577|Ga0316602_10103257Not Available507Open in IMG/M
3300031707|Ga0315291_10254006All Organisms → cellular organisms → Archaea → Euryarchaeota1753Open in IMG/M
3300031772|Ga0315288_10158736All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica2506Open in IMG/M
3300031772|Ga0315288_10272005All Organisms → cellular organisms → Archaea → Euryarchaeota1788Open in IMG/M
3300031772|Ga0315288_11162718Not Available669Open in IMG/M
3300031834|Ga0315290_10580625All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula974Open in IMG/M
3300031952|Ga0315294_10255325All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica1708Open in IMG/M
3300031999|Ga0315274_10171312All Organisms → cellular organisms → Archaea → Euryarchaeota2728Open in IMG/M
3300031999|Ga0315274_11733231Not Available577Open in IMG/M
3300032053|Ga0315284_10697786All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1192Open in IMG/M
3300032118|Ga0315277_11579505All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula557Open in IMG/M
3300032143|Ga0315292_10286474All Organisms → cellular organisms → Archaea → Euryarchaeota1368Open in IMG/M
3300032143|Ga0315292_10755654All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula816Open in IMG/M
3300032143|Ga0315292_11563385Not Available532Open in IMG/M
3300032397|Ga0315287_11196423Not Available875Open in IMG/M
3300032516|Ga0315273_10254897All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei2390Open in IMG/M
3300033004|Ga0335084_10977742Not Available853Open in IMG/M
3300033413|Ga0316603_11145826All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica736Open in IMG/M
3300033418|Ga0316625_100468883Not Available980Open in IMG/M
3300033418|Ga0316625_101103927All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula717Open in IMG/M
3300033433|Ga0326726_10083073All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula2842Open in IMG/M
3300033433|Ga0326726_10177214All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1957Open in IMG/M
3300033433|Ga0326726_11280032All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica713Open in IMG/M
3300033481|Ga0316600_10528815All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica820Open in IMG/M
3300033481|Ga0316600_10740410All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula692Open in IMG/M
3300033482|Ga0316627_101421021Not Available698Open in IMG/M
3300033485|Ga0316626_10622475Not Available933Open in IMG/M
3300033502|Ga0326731_1099356All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula670Open in IMG/M
3300033513|Ga0316628_100449322All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula1651Open in IMG/M
3300033521|Ga0316616_100484881Not Available1409Open in IMG/M
3300034169|Ga0370480_0176703Not Available726Open in IMG/M
3300034281|Ga0370481_0000079All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica46135Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment10.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment9.29%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil9.29%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland7.14%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge4.29%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland3.57%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands3.57%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.57%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.86%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.86%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.86%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment2.14%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen2.14%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface2.14%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate2.14%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.43%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.43%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.43%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.43%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.43%
Lake SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment1.43%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.43%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.71%
Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment0.71%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.71%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.71%
WetlandEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland0.71%
SedimentEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Sediment0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.71%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.71%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.71%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.71%
Anaerobic Enrichment CultureEngineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Anaerobic Enrichment Culture0.71%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
3300000318Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L1 CattailEnvironmentalOpen in IMG/M
3300001279Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300002219Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:EngineeredOpen in IMG/M
3300002961Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300003860Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PLEnvironmentalOpen in IMG/M
3300003910Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LWEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005208Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2EnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300008944T18 (1) (Live), Syntrophic microbial communities from an anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom ? benzoate enriched in lab, transferred 6 times DE NOVO (2)EnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009039Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cmEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009119Lake sediment microbial communities from Leach Lake, MNEnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009583Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_9_15_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009587Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009621Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150EnvironmentalOpen in IMG/M
3300009692Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaGEngineeredOpen in IMG/M
3300009694Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW1_MetaGEngineeredOpen in IMG/M
3300009771Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaGEngineeredOpen in IMG/M
3300010352AD_JPHWcaEngineeredOpen in IMG/M
3300010429AD_USRAcaEngineeredOpen in IMG/M
3300011340Combined Assembly of Wetland MetatranscriptomesEnvironmentalOpen in IMG/M
3300013080Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013088Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200mEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014204Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaGEngineeredOpen in IMG/M
3300014205Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaGEngineeredOpen in IMG/M
3300014256Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2EnvironmentalOpen in IMG/M
3300014258Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D1EnvironmentalOpen in IMG/M
3300014266Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1EnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019264Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019861Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA - DGG1A 1EngineeredOpen in IMG/M
3300021473Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15mEnvironmentalOpen in IMG/M
3300021605Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10mEnvironmentalOpen in IMG/M
3300025376Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA10M (SPAdes)EnvironmentalOpen in IMG/M
3300025812Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025963Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025978Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026055Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026060Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026346Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 C5EnvironmentalOpen in IMG/M
3300026463Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6EnvironmentalOpen in IMG/M
3300026464Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5EnvironmentalOpen in IMG/M
3300027715Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)EnvironmentalOpen in IMG/M
3300027723Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300028858Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_2EnvironmentalOpen in IMG/M
3300029268 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300029981Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_2EnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031577Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CTEnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033502Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fractionEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Bog_all_C_054805902140918008SoilMRRDFWSLGVPLVADQFGAPAKTAGRADFLLGMERDLPAAPAGDVGELVHLSH
WSSedL1CaDRAFT_1009162933300000318WetlandFGASAKPAGRALFFLGVKRNFTTAPAGDMGELVHLSH*
JGI20214J14112_100005883300001279WetlandMRRDFWPFVVPLVADHLCASAKTAGRADFLLGMERNLPAAPAGDVGELVHLAH*
SCADCLC_1000892753300002219Hydrocarbon Resource EnvironmentsMINLLMCWDFWSLCVPLIAAHFCASAKTAGRADFLLGVERDLPTAPTGDMGELVHLSH*
JGI11641J44799_1000215023300002961WetlandMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMXKFVHLSH*
JGI20214J51088_1001919733300003432WetlandMITLLMSWDFWSLCVPLIVAHFCASAKTAGRADLFLGMERDLPTAPAGDMGELVHLSH*
JGI20214J51088_1007077913300003432WetlandMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDM
JGI20214J51088_1007972733300003432WetlandMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRNFTTAPAGDMGELVHLSH*
JGI20214J51088_1097139213300003432WetlandMRWNFWSLRGPLVAAHFGASAKTAGRTLLFLGVKRDFSTAPAGDMGKFVHLSH*
JGI20214J51650_1008980113300003541WetlandMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMGKFVHLSH*
JGI20214J51650_1014211023300003541WetlandMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGELVHLSH*
JGI20214J51650_1042005833300003541WetlandHMITLLMSWDFWSLCVPLIVAHFCASAKTAGRADLFLGMERDLPTAPAGDMGELVHLSH*
Ga0031655_1025375423300003852Freshwater Lake SedimentMCRDFWSLVIPFVADEPGAPAKTTGRADFLLGMERDLPAAPAGDVGELVHLSHGWSAF*
Ga0031656_1000580633300003858Freshwater Lake SedimentMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGKLVHLSH*
Ga0031658_100367613300003860Freshwater Lake SedimentMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRNFTTAPAGD
Ga0031658_100730733300003860Freshwater Lake SedimentMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGMKRDFPTAPAGDVSKFVHLSH*
JGI26437J51864_1000253453300003910Freshwater Lake SedimentMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMSELVHLSH*
JGI26437J51864_1001613243300003910Freshwater Lake SedimentMRWNFWSLRGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH*
Ga0069718_1000132833300004481SedimentMTLMSWNFWSLCVPLIAGHLSAPAETAGRTDFFLGVKRDLPTAPAGDMSELVHLSH*
Ga0069718_1605019823300004481SedimentMPLIAAHLCASAKTAGRADFLLGVERDLPTAPAGDMGELVHLSH*
Ga0069003_1000999513300005208Natural And Restored WetlandsMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH*
Ga0079303_1030809023300006930Deep SubsurfaceMRWNFWSLRGPVIAAHFGASAKTAGRTLLFLGVKRDFPTAPAGDMGKFVHLSH*
Ga0115987_101630913300008944SedimentYNSLMRYCFWSLGVPLKVGYLCALAKTTGRADFLLGVERDLPTAPAGDVSELVHLAH*
Ga0105093_1006195423300009037Freshwater SedimentMSWNFWSLRVPLIAGHLSAPAETAGRTDFFLGVKRDLPTTPAGDMSELVHLSH*
Ga0105152_1012885833300009039Lake SedimentMRWDFWSLCVPLIAAHFCASAKTAGRALFFLGVKRDFPTAPAGDMGELVHLSH*
Ga0105095_1020199633300009053Freshwater SedimentDATLMRWNFWSLCGPLIAAHFCASAKPAGRALFFLGVKRDFPTAPTGYMGKFVHLSH*
Ga0105098_1009134733300009081Freshwater SedimentMRRDFWPLGVPLVADELRAPAKTTGRADFLLGMERNLPTAPAGDVGELVHLSH*
Ga0105103_1015788423300009085Freshwater SedimentMRNGFWSLGVPLVADELRAPAKTTGRADFLLGMERDLPAAPAGDVGELVHLSH*
Ga0105103_1016968213300009085Freshwater SedimentLVAAHFGASAKTAGRALFFLGMERDFTTPPAGDMSKFVHLSH*
Ga0105107_1022348923300009087Freshwater SedimentMGRDFWSLSGPLVAAHFGASAKTAGRALFFLGMERNFTTPPAGDMGKFVHLSH*
Ga0117938_10205933300009119Lake SedimentMRWNFWSLCGPLIAAHFSASAKPAGRALFFLGMKRDFPTAPAGDMGELVHLSH*
Ga0117938_11221823300009119Lake SedimentMRYGFWSLVVPLVADELGAPAKTAGRADFLLGMERDLPAAPAGDVGELVHLSHGWSAF*
Ga0115027_1009070243300009131WetlandRRDFWSLRVPLVADELGASAKTTGRADFLLGMERDLPAAPAGDMGELVHLSH*
Ga0105091_1063775723300009146Freshwater SedimentHFGASAKTAGRALFFLGVERDFTAPPAGDMGKLVHLSH*
Ga0105094_1015290733300009153Freshwater SedimentMCWNFWSLCSPLVAAHFGASAKTAGRALFFLGMERNFTTPPAGDMGKFVHLSH*
Ga0105092_1082118723300009157Freshwater SedimentMRYSFWSLVIPLVADQLGAPAKTAGRADFLLGMERDLPAAPAGDVRELVPLSH*
Ga0105097_1056098413300009169Freshwater SedimentDDANDTTHGATLMCWNFWSLCSPLVAAHFGASAKTAGRALFFLGVERDFTAPPAGDMSKLVHLSH*
Ga0115028_1009481133300009179WetlandMRWNFWSLRGPVVAAHFGASAKTAGRTLLFLGVKRDFPTAPAGDMGKFVHLSH*
Ga0115598_109680023300009583WetlandMSWDFWSLCVPLIAGHLSAPAETAGRTDFFLGVKRDLPTAPAGDVGELVPLTHGWSAF*
Ga0115602_122938823300009587WetlandMRRDFWSLGVPLVADELAAPAKTAGRADFLLGMERDRPAAPAGGVGELVQLSH*
Ga0116116_104402913300009621PeatlandDTTHGTALMRRSFWSLAVPLVVLHLGASAKPAGRADFLLGVERDLATAPAGDVGHLVHLTH*
Ga0116171_10012867113300009692Anaerobic Digestor SludgeWSLAVPLVVLHLGASAKPAGRADFLLGVERDLATAPAGDVGKLVHLTH*
Ga0116170_1047499413300009694Anaerobic Digestor SludgePAKTTGRADFLLGMERDLPAAPAGDVGELVHLSH*
Ga0116170_1068676013300009694Anaerobic Digestor SludgeMRYCFWSLGVPLIIGDLRAFAKTTGRADFLLGMERDLPAAPAGDMRVLVPLTH*
Ga0116155_1001673853300009771Anaerobic Digestor SludgeMRRDFWSLGVPLVADELGAPAKTAGRADFLLGMERDLPAAPAGDMGELVHLSHGWSAF*
Ga0116247_1113729823300010352Anaerobic Digestor SludgeMRRSFWSLAVPLVVLHLGASAKPAGRADFLLGVERDLATAPAGDVGELVHLTH*
Ga0116241_1078060613300010429Anaerobic Digestor SludgeLVADQLGAPAKTTGRADFLLGMERDLPAAPAGDVGELVHLSH*
Ga0151652_1348091523300011340WetlandMRWNFWSLRCPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMGKFVHFSH*
Ga0153913_110086223300013080Freshwater WetlandsMRWDFWSLCVPLVAGDLRALAKTTGRADFFLGMERDIPAAPAGDVGELVPLSH*
Ga0163200_105878423300013088FreshwaterMRWDFWSFGIPFIADEFRAPAKTTGRADFLLGVIRDLPTAPAGDMGLLVSLSH*
Ga0181517_1003100553300014160BogMRRDFWSLGVPFETLHLSTSAEPTGRADFFLGMERDLATTPAGDMGHLVHLSH*
Ga0172381_1101123223300014204Landfill LeachateMCWDLWSFGIPFIADEFRAPAKPAGRADFLLGVIRDAPTAPAGDMGLLVSLSH*
Ga0172380_1041098623300014205Landfill LeachateMGWNFWSLCVPLVAGHLGAPAKTTGGADFLLGVKRDLPAAPAGDVSELVHLSH*
Ga0172380_1115286623300014205Landfill LeachateLHLGASAKPAGRADFLLGVERDLATAPAGDVGHLVHLTH*
Ga0075318_112978123300014256Natural And Restored WetlandsLMRWDFWSLGVPLVAEYSGASAKTTGRAFFLLGVERDAPTSPAGDVGLLVHLSH*
Ga0075315_100055923300014258Natural And Restored WetlandsMSWDFWSLCVPLIPGHLGAPAETAGRTDFFLGVKRDLPTPPAGDMGELVHLSH*
Ga0075359_100082013300014266Natural And Restored WetlandsDTTHGKTLMRRDFWPFVVPLVADHLCASAKTAGRADFLLGMERNLPAAPAGDVGELVHLAH*
Ga0182010_1087938823300014490FenMVGLLMRWDFGPLCVPLVAAHLCASAKPAGGADFLLGVERDLSAAPAGDVGELVHFAH*
Ga0182019_1025101533300014498FenMRRDFWSLIVPLVTDHLGASAKTTGRADFFLGMERDLPTPPAGDMGEFVHLSH*
Ga0182021_10000930133300014502FenMITLLMSWDFWSLCVPLIVAHLCASAKPAGRANFFLGMKRDLPTAPAGDMGELVHLSH*
Ga0187786_1036172513300017944Tropical PeatlandMRRDFWSLVVPLVADQLSASAKTTGRADFLLGVIRDLPTAPAGDMGEFVHLTH
Ga0187778_1050121713300017961Tropical PeatlandMRRDFRALGVPLVAGHLGAPAKPAGGADFFLGVERDLPATPAGDVG
Ga0187782_1033444133300017975Tropical PeatlandSLGRPLVTLHFRASAKSTGRTDFFLGMERDLATAPAGDVSHLVHLTH
Ga0181520_1011917533300017988BogMRRDFWSLGVPFETLHLSTSAEPTGRADFFLGMERDLATTPAGDMGHLVHLSH
Ga0187767_1014956833300017999Tropical PeatlandGCQRYRTWWDSLMRRDLRSLGVPLMAGHLGAPAKPAGGADFFLGMERDLPAPPAGDVGELVHLTH
Ga0187861_1047113513300018020PeatlandMRRDFWSLGVPLVADHLGAPAKTTGRADFLLGVERDLPTAPAGDVRELVPLAH
Ga0187869_1049665913300018030PeatlandDSTHGTTLMRRDFWSLGVPLVADHLGAPAKTTGRADFLLGVERDLPTAPAGDVRELVPLA
Ga0187765_1002271753300018060Tropical PeatlandMRRDFWSLVVPLVADQLGAPAKPAGRADFLLGVERDLPAAPAGDVGELVHLTHGWSAF
Ga0187796_164170723300019264PeatlandIHRQHPRCQRYRTWWDSLMRRDLRSLGVPLMAGHLGAPAKPAGGADFFLGMERDLPAPPAGDMGELVHLTH
Ga0206388_115072523300019861Anaerobic Enrichment CultureMCWDLWSFGIPFIADEFRAPAKPAGRADFLLGVIRDAPTAPAGDMGLLVSLSH
Ga0194043_126744523300021473Anoxic Zone FreshwaterTHSTTLMRWDFWSFGMPPVTEYSGASAKTTGRAFFLLGVKRDLPTSPAGDMGLLVHLSH
Ga0194054_1001793013300021605Anoxic Zone FreshwaterMRWDFWSFGMPPVTEYSGASAKTTGRAFFLLGVKRDLPTSPAGDM
Ga0208494_101706213300025376FreshwaterTLMRWNFWSFGMPPVTEYSGASAKTTGRAFFLLGVKRDLPTSPAGDMGLLVHLSH
Ga0208457_105372913300025812PeatlandDTTHGTALMRRSFWSLAVPLVVLHLGASAKPAGRADFLLGVERDLATAPAGDVGHLVHLT
Ga0210146_100532923300025963Natural And Restored WetlandsMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH
Ga0210146_101333223300025963Natural And Restored WetlandsMITLLMSWDFWSLCVPLIVAHFCASAKTAGRADLFLGMERDLPTAPAGDMGELVHLSH
Ga0210092_105584913300025978Natural And Restored WetlandsTTHDKTLMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH
Ga0208003_100459523300026055Natural And Restored WetlandsMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRNFTTAPAGDVGELVHLSH
Ga0208295_100692513300026060Natural And Restored WetlandsNDTTHGKTLMRRDFWPFVVPLVADHLCASAKTAGRADFLLGMERNLPAAPAGDVGELVHLAH
Ga0256812_100745913300026346SedimentCGPLIAAHLGASAKPAGRALFFLGVKRNFTTAPAGDMGELVHLSH
Ga0256815_100178423300026463SedimentMRWNFWSLCDPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH
Ga0256814_101940333300026464SedimentHGKTLMRWNFWSLCGPLIAAHLGASAKPAGRALFFLGVKRNFTTAPAGDMGELVHLSH
Ga0208665_1006239413300027715Deep SubsurfaceHMIGLLMRWDFWSLCVPLIGGHLCAPAETAGRTDFFLGVERDLPTSPAGDMSELVHLSH
Ga0208665_1020617523300027715Deep SubsurfaceMRWDFWSLCVPLIGGHLCAPAETAGRTDFFLGVERDLPTSP
Ga0209703_103771633300027723Freshwater SedimentMSWNFWSLCVPLIAGHLSAPAETAGRTDFFLGVKRNLPTAPAGDMSKFVH
Ga0209592_119609933300027731Freshwater SedimentTLMRWNFWSLCGPLIAAHFCASAKPAGRALFFLGVKRDFPTAPTGYMGKFVHLSH
Ga0209261_1003959733300027735Wetland SedimentMRWDFWSLGVPLVAEYSGASAKTTGRAFFLLGVERNLPTSPAGDVGFLVHLSH
Ga0209706_1014802833300027818Freshwater SedimentMGRDFWSLSGPLVAAHFGASAKTAGRALFFLGMERNFTTPPAGDMGKFVHLSH
Ga0209706_1028392323300027818Freshwater SedimentMSWDFWSLCVPLIAGHLSAPAETAGRTDFFLGVKRDLPTTPAGDMSE
Ga0209450_1007523823300027885Freshwater Lake SedimentMRWNFWSLRGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH
Ga0209450_1034123813300027885Freshwater Lake SedimentMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGMKRDFPTAPAGDMS
Ga0209496_1040364613300027890WetlandLVADELGAPAKTAGRADFLLGMERDLPAAPAGDVGELVHLSHRWSAF
Ga0209254_1037997233300027897Freshwater Lake SedimentAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGELVHLSH
Ga0209668_1067549723300027899Freshwater Lake SedimentMRWNFWSLCGPLIAAHLGASAKPAGRALFFLGVKRDFPTAPAGDMGELVHLSH
Ga0209253_1043261813300027900Freshwater Lake SedimentHFSASAKTAGRALFFLGVERDFPTAPAGDVGKLVHLSH
Ga0209048_1030872433300027902Freshwater Lake SedimentAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGEFVHLSH
Ga0209048_1032197533300027902Freshwater Lake SedimentAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGKLVHLSH
Ga0302216_116027923300028858FenHGKTLMRRDFWPLGVPLVADQLGAPAKTAGRADFLLGMERDLPAAPAGDVGELVHLAH
(restricted) Ga0247842_1054364213300029268FreshwaterMRRDFWSLAVPLIIADLRASAKTTGRADFLLGMERDLATAPAGDVGELVPLTH
(restricted) Ga0247841_1019666933300029286FreshwaterMRWDFWSFGIPFIADEFRAPAKTTGRADFFLGVIRDLPTAPAGDMGLLVPLSH
(restricted) Ga0247841_1041323933300029286FreshwaterLMRWDFWSFGIPLIADEFRASAKTTGRADFFLGVIRDLPTAPAGDMGLLVHLSH
Ga0302293_1009191323300029981FenMRRDFWPLGVPLVADQLGAPAKTAGRADFLLGMERDLPAAPAGDVGELVHLAH
Ga0311337_1008461253300030000FenMITLLMSWDFWSLCVPLIVAHLCASAKPAGRANFFLGMKRDLPTAPAGDMGELVHLSH
Ga0311348_1008913813300030019FenAHLCASAKPAGRANFFLGMKRDLPTAPAGDMGELVHLSH
Ga0311333_1055950323300030114FenMRRDFWSLIVPLVTDHLGASAKTTGRADFFLGMERDLPTPPAGDMGEFVHLSH
Ga0265316_1009069163300031344RhizosphereDANDTAHDTTLMRRDFWSLAVPLIVADFRAFAKTTGRADFLLGMERDLPAAPAGDVGELVHLSH
Ga0316602_1010325723300031577SoilDTTLMGWNFWSLCSPLIAAHFCASAKPAGRTLFFLGVKRDLPTAPAGDMSELVHLSH
Ga0315291_1025400623300031707SedimentMCWDFWALCVPLKVAHFCASAKTAGRADFLLGVERDLPTAPAGDMGEL
Ga0315288_1015873663300031772SedimentRGPLIAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH
Ga0315288_1027200513300031772SedimentMRWNFWSLRGPLVAAHFGASAKTAGRALFFLGVKRDFPTAPTCDMGKFVH
Ga0315288_1116271813300031772SedimentMRWNFWSLCGPLIAAYFGASAKPAGRALFFLGVKRDFPTAPAGDMG
Ga0315290_1058062523300031834SedimentMRWDFWSFVIPLIADQFRASAKTTGRADFFLGMIRDLPTAPAGDMGLLVHFSH
Ga0315294_1025532523300031952SedimentMCWDFWSLCVPLKVAHFCASAKTAGRADFLLGVERDLPTAPAGDMGELVHLSH
Ga0315274_1017131243300031999SedimentMRWNFWSLCGPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGELVHL
Ga0315274_1173323123300031999SedimentPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMGELVHLSH
Ga0315284_1069778623300032053SedimentMRWNFWSLRGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMGKFVHLSH
Ga0315277_1157950523300032118SedimentMRWNFWSLRGPLVAAHFGASAKTAGRTLFFLGVKRNFPTAPAGDMGKFVHLSH
Ga0315292_1028647423300032143SedimentMRWNFWSLRGPLIAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSK
Ga0315292_1075565423300032143SedimentMRWDFWSFGIPFIADEFRAPAKTTGGADFFLGVIRDLPTAPAGDMGFLVPLSH
Ga0315292_1156338523300032143SedimentDANDTTHDKTLMRWNFWSLCGPLVAAHFGASAKTAGRTLFFLGVKRDFPTAPAGDMSKFVHLSH
Ga0315287_1119642313300032397SedimentMRWNFWSLSGPLVVAHFSASAKTAGRALFFLGMERDFPTAPAGDMGKL
Ga0315273_1025489723300032516SedimentMRWDFWSFGIPFIADEFRAPAKTTGGADFFLGVIRDLPTAPAGDMGLLVPLSH
Ga0335084_1097774223300033004SoilMRRDFWSLVVPLVADQFGAPAKTAGRADFLLGMERDLPAAPAGDMGELVHLTHGWSAF
Ga0316603_1114582613300033413SoilDANDTTHGTTLMCRNFWSLCGPLIAAHFSASAKPAGRALFFLGVKRDFPTAPAGDMGELVHLSH
Ga0316625_10046888323300033418SoilMRWNFWSLCGPLIAAHFGASAKTAGRALFFLGVKRDFTTAPAGDMGKLVHLSH
Ga0316625_10110392723300033418SoilMGRDFWSLSGPLVAAHFGASAKTAGRALFFLGMERNFTTPPAGDMSKFVHLSH
Ga0326726_1008307313300033433Peat SoilMGWNFWSLCVPLVAGHLGAPAKTTGRADFLLGMKRDLPTAPAGDMSELVHLSH
Ga0326726_1017721443300033433Peat SoilMSWDFWSLCVPLIVAHFCASAKTAGRADLFLGMERDLPTAPAGDMGELVHLSH
Ga0326726_1128003213300033433Peat SoilCGPLVAAHFGASAKTAGRALFFLGVKRDFTTPPAGDMSKFVHLSH
Ga0316600_1052881533300033481SoilDANDTTHDTTLMRWNFWSLCSPLIAAHFCASAKPAGRTLFFLGVKRDLPTAPAGDMSELVHLSH
Ga0316600_1074041013300033481SoilLRAPAKTTGRADFLLGMERDLPAAPAGDVGELVHLSHRWSAF
Ga0316627_10142102123300033482SoilMRWNFWSLRGPVIAAHFGASAKTAGRTLLFLGVKRDFPTAPAGDMGKFVHLSH
Ga0316626_1062247523300033485SoilMRWDFWSLCVPLIGGHLCAPAETAGRTDFFLGVERDLPTSPAGDMSELVHFS
Ga0316624_1158360423300033486SoilMRWDFWSLCVPLVSGHLCAPAETAGRTDFFLGVKRDLPASPAC
Ga0316630_1128060813300033487SoilMRWDFWSLCVPLIGGHLCAPAETAGRTDFFLGVERDLPTS
Ga0326731_109935623300033502Peat SoilMRRDFWPLVVPLVTDHFGASAKTTGRADFLLGMERDLPAPPAGDMGELVHLSH
Ga0316628_10044932223300033513SoilMRWDFWSLCVPLVSGHLCAPAETAGRTDFFLGVKRDLPASPAGDMSELVHLSH
Ga0316616_10048488113300033521SoilMRWNFWSLCDPLIAAHFGASAKPAGRALFFLGVKRDFPTAPAGDMSELVHLSH
Ga0370480_0176703_584_7243300034169Untreated Peat SoilLCVPLIAAHFCASAKTAGRADFLLGVERDLPTAPAGDMGELVHLSH
Ga0370481_0000079_37770_379313300034281Untreated Peat SoilMRYSFWSLVIPLVADQLGAPAETAGRADFLLGMERDLPAAPAGDVGELVHLSH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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