NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F048390

Metagenome / Metatranscriptome Family F048390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F048390
Family Type Metagenome / Metatranscriptome
Number of Sequences 148
Average Sequence Length 64 residues
Representative Sequence MVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGNVSICVNPVKKGKFEITLKP
Number of Associated Samples 113
Number of Associated Scaffolds 148

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 16.89 %
% of genes near scaffold ends (potentially truncated) 23.65 %
% of genes from short scaffolds (< 2000 bps) 72.97 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.054 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge
(22.973 % of family members)
Environment Ontology (ENVO) Unclassified
(45.270 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(52.027 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.98%    β-sheet: 29.07%    Coil/Unstructured: 63.95%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 148 Family Scaffolds
PF07927HicA_toxin 6.76
PF04014MazE_antitoxin 4.73
PF09250Prim-Pol 2.70
PF01402RHH_1 2.03
PF04851ResIII 0.68
PF00708Acylphosphatase 0.68
PF13412HTH_24 0.68
PF03681Obsolete Pfam Family 0.68
PF14104DUF4277 0.68
PF00665rve 0.68
PF02371Transposase_20 0.68
PF12770CHAT 0.68
PF13518HTH_28 0.68
PF13749HATPase_c_4 0.68
PF01850PIN 0.68
PF13614AAA_31 0.68
PF08241Methyltransf_11 0.68
PF13240zinc_ribbon_2 0.68
PF01930Cas_Cas4 0.68
PF00176SNF2-rel_dom 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 148 Family Scaffolds
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 6.76
COG1468CRISPR/Cas system-associated exonuclease Cas4, RecB familyDefense mechanisms [V] 0.68
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.68
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.68
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.68
COG3547TransposaseMobilome: prophages, transposons [X] 0.68
COG4584TransposaseMobilome: prophages, transposons [X] 0.68


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.05 %
All OrganismsrootAll Organisms20.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000032|Draft_c0058595Not Available617Open in IMG/M
3300000032|Draft_c0527008Not Available657Open in IMG/M
3300000568|Draft_10014073Not Available4129Open in IMG/M
3300001095|JGI12104J13512_1023897Not Available1261Open in IMG/M
3300001567|Draft_10169293Not Available564Open in IMG/M
3300001749|JGI24025J20009_10010530All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix5112Open in IMG/M
3300002703|draft_11033953Not Available1554Open in IMG/M
3300003432|JGI20214J51088_10068128Not Available2490Open in IMG/M
3300003432|JGI20214J51088_10558736Not Available727Open in IMG/M
3300003535|Ba1_1000195Not Available12769Open in IMG/M
3300003852|Ga0031655_10132382All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300004481|Ga0069718_14079553Not Available515Open in IMG/M
3300005325|Ga0074199_1008189Not Available3364Open in IMG/M
3300006056|Ga0075163_11252517Not Available738Open in IMG/M
3300006224|Ga0079037_100650253Not Available1026Open in IMG/M
3300006224|Ga0079037_100666599Not Available1014Open in IMG/M
3300006360|Ga0079079_1076104Not Available618Open in IMG/M
3300006387|Ga0079069_1361832Not Available700Open in IMG/M
3300006434|Ga0100130_108241Not Available958Open in IMG/M
3300006435|Ga0099706_101439All Organisms → cellular organisms → Bacteria → Proteobacteria2984Open in IMG/M
3300006593|Ga0079081_1114105Not Available520Open in IMG/M
3300006651|Ga0101725_113424Not Available848Open in IMG/M
3300006652|Ga0101729_1001936All Organisms → cellular organisms → Bacteria3461Open in IMG/M
3300006670|Ga0101737_114441Not Available1002Open in IMG/M
3300006883|Ga0102488_110422Not Available752Open in IMG/M
3300006887|Ga0102491_107470Not Available1656Open in IMG/M
3300006887|Ga0102491_110791All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300006930|Ga0079303_10277303Not Available688Open in IMG/M
3300006930|Ga0079303_10418679Not Available570Open in IMG/M
3300007031|Ga0102621_103489All Organisms → cellular organisms → Bacteria2006Open in IMG/M
3300007051|Ga0102624_127748Not Available604Open in IMG/M
3300008944|Ga0115987_1017638Not Available747Open in IMG/M
3300009091|Ga0102851_13523821Not Available502Open in IMG/M
3300009111|Ga0115026_10251670Not Available1211Open in IMG/M
3300009111|Ga0115026_10714547Not Available774Open in IMG/M
3300009131|Ga0115027_10360677Not Available1002Open in IMG/M
3300009131|Ga0115027_11045356All Organisms → cellular organisms → Archaea643Open in IMG/M
3300009131|Ga0115027_11765669Not Available517Open in IMG/M
3300009167|Ga0113563_12503209Not Available623Open in IMG/M
3300009167|Ga0113563_13459252All Organisms → cellular organisms → Archaea534Open in IMG/M
3300009179|Ga0115028_10466924Not Available907Open in IMG/M
3300009179|Ga0115028_10750088Not Available753Open in IMG/M
3300009179|Ga0115028_10842692Not Available719Open in IMG/M
3300009502|Ga0114951_10184899Not Available1125Open in IMG/M
3300009542|Ga0116234_1068758Not Available1218Open in IMG/M
3300009566|Ga0130025_1229993Not Available6629Open in IMG/M
3300009671|Ga0123334_1004432All Organisms → cellular organisms → Bacteria14315Open in IMG/M
3300009674|Ga0116173_1028470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP3327Open in IMG/M
3300009674|Ga0116173_1044228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP2527Open in IMG/M
3300009674|Ga0116173_1050739Not Available2317Open in IMG/M
3300009674|Ga0116173_1503654Not Available513Open in IMG/M
3300009685|Ga0116142_10015245Not Available5453Open in IMG/M
3300009692|Ga0116171_10133116Not Available1462Open in IMG/M
3300009693|Ga0116141_10007972Not Available8633Open in IMG/M
3300009694|Ga0116170_10183239Not Available1249Open in IMG/M
3300009771|Ga0116155_10030192All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2774Open in IMG/M
3300010236|Ga0136246_10001992All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix7819Open in IMG/M
3300010302|Ga0116202_10134686Not Available1185Open in IMG/M
3300010319|Ga0136653_10193907Not Available935Open in IMG/M
3300010319|Ga0136653_10540639Not Available503Open in IMG/M
3300010346|Ga0116239_10865461Not Available563Open in IMG/M
3300010347|Ga0116238_10373778Not Available930Open in IMG/M
3300010351|Ga0116248_10317038Not Available1203Open in IMG/M
3300010351|Ga0116248_10903421Not Available606Open in IMG/M
3300010352|Ga0116247_10004577All Organisms → cellular organisms → Archaea → Euryarchaeota19998Open in IMG/M
3300010352|Ga0116247_10047145Not Available4123Open in IMG/M
3300010353|Ga0116236_10030150All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia6242Open in IMG/M
3300010353|Ga0116236_10333899All Organisms → cellular organisms → Archaea1311Open in IMG/M
3300012931|Ga0153915_10017796All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix6940Open in IMG/M
3300012956|Ga0154020_10247033Not Available1609Open in IMG/M
3300013088|Ga0163200_1002944Not Available5863Open in IMG/M
(restricted) 3300013127|Ga0172365_10134194Not Available1555Open in IMG/M
(restricted) 3300013128|Ga0172366_10259150Not Available1092Open in IMG/M
(restricted) 3300013128|Ga0172366_10408874Not Available825Open in IMG/M
(restricted) 3300013129|Ga0172364_10327170Not Available997Open in IMG/M
(restricted) 3300013130|Ga0172363_10673918Not Available650Open in IMG/M
(restricted) 3300013133|Ga0172362_10170679All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. SDB1597Open in IMG/M
(restricted) 3300013133|Ga0172362_10345520Not Available1045Open in IMG/M
3300014206|Ga0172377_10554595Not Available930Open in IMG/M
3300014490|Ga0182010_10197538Not Available1053Open in IMG/M
3300014490|Ga0182010_10581647Not Available624Open in IMG/M
3300014494|Ga0182017_10068212Not Available2352Open in IMG/M
3300014496|Ga0182011_10003167All Organisms → cellular organisms → Archaea → Euryarchaeota13588Open in IMG/M
3300014496|Ga0182011_10302181Not Available1062Open in IMG/M
3300014496|Ga0182011_10312702Not Available1040Open in IMG/M
3300014498|Ga0182019_10093032All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia1832Open in IMG/M
3300014502|Ga0182021_11629118Not Available777Open in IMG/M
3300014502|Ga0182021_12986937Not Available567Open in IMG/M
3300019203|Ga0179955_1097376Not Available1330Open in IMG/M
3300019219|Ga0179942_1095423Not Available580Open in IMG/M
3300019222|Ga0179957_1176889Not Available1359Open in IMG/M
3300019237|Ga0180028_1162359Not Available651Open in IMG/M
3300019237|Ga0180028_1215341Not Available1111Open in IMG/M
3300019247|Ga0179937_1039356Not Available750Open in IMG/M
3300019861|Ga0206388_1003360Not Available30844Open in IMG/M
3300020814|Ga0214088_1893221All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix harundinacea1616Open in IMG/M
3300021603|Ga0226659_10087854All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix harundinacea1642Open in IMG/M
3300022553|Ga0212124_10008874Not Available7097Open in IMG/M
3300022556|Ga0212121_10053248Not Available3327Open in IMG/M
3300023075|Ga0224520_1106760Not Available621Open in IMG/M
3300023254|Ga0224524_1092465Not Available525Open in IMG/M
3300025136|Ga0209610_1023008All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix2387Open in IMG/M
3300025145|Ga0209609_10244149Not Available572Open in IMG/M
3300025306|Ga0208045_1127985Not Available550Open in IMG/M
3300025677|Ga0209719_1107391Not Available831Open in IMG/M
3300025714|Ga0208458_1018268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP3306Open in IMG/M
3300025714|Ga0208458_1145042Not Available793Open in IMG/M
3300025720|Ga0208197_1006602Not Available7646Open in IMG/M
3300025856|Ga0209604_1003570Not Available10621Open in IMG/M
3300025858|Ga0209099_1010894All Organisms → cellular organisms → Archaea → Euryarchaeota5735Open in IMG/M
3300025858|Ga0209099_1100461Not Available1261Open in IMG/M
3300025859|Ga0209096_1032383Not Available2544Open in IMG/M
3300027715|Ga0208665_10299720Not Available504Open in IMG/M
3300027885|Ga0209450_11274650Not Available506Open in IMG/M
3300027890|Ga0209496_10355154Not Available749Open in IMG/M
3300027958|Ga0209749_1014688Not Available2910Open in IMG/M
3300028032|Ga0265296_1000830Not Available40999Open in IMG/M
3300028032|Ga0265296_1001168Not Available31895Open in IMG/M
3300028638|Ga0302240_1082978Not Available732Open in IMG/M
3300028916|Ga0310376_1004787Not Available7658Open in IMG/M
3300028916|Ga0310376_1030187Not Available1237Open in IMG/M
3300028923|Ga0310375_1052422Not Available567Open in IMG/M
3300029601|Ga0307371_130851Not Available631Open in IMG/M
3300029673|Ga0307355_122703Not Available686Open in IMG/M
3300030002|Ga0311350_12070000Not Available501Open in IMG/M
3300031232|Ga0302323_102187543Not Available630Open in IMG/M
3300031759|Ga0316219_1012981All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix harundinacea4511Open in IMG/M
3300031902|Ga0302322_100777322Not Available1141Open in IMG/M
3300032143|Ga0315292_10087112All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii2412Open in IMG/M
3300032342|Ga0315286_11802401Not Available575Open in IMG/M
3300032397|Ga0315287_11487803Not Available766Open in IMG/M
3300032401|Ga0315275_10255664Not Available1957Open in IMG/M
3300032401|Ga0315275_10321085All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin1121734Open in IMG/M
3300033161|Ga0334893_1003397All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix10193Open in IMG/M
3300033173|Ga0334889_1054447All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. SDB1501Open in IMG/M
3300033413|Ga0316603_11861266Not Available570Open in IMG/M
3300033414|Ga0316619_11212761Not Available667Open in IMG/M
3300033418|Ga0316625_100890114Not Available778Open in IMG/M
3300033482|Ga0316627_101975297Not Available605Open in IMG/M
3300033521|Ga0316616_100314676All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin1121672Open in IMG/M
3300033521|Ga0316616_102311717Not Available718Open in IMG/M
3300033557|Ga0316617_101333789Not Available718Open in IMG/M
3300033557|Ga0316617_101701590Not Available642Open in IMG/M
3300033743|Ga0334844_034845Not Available979Open in IMG/M
3300033743|Ga0334844_046847Not Available838Open in IMG/M
3300033743|Ga0334844_086873Not Available612Open in IMG/M
3300034281|Ga0370481_0069453Not Available1145Open in IMG/M
3300034281|Ga0370481_0272187Not Available610Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge22.97%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment8.11%
SedimentEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Sediment6.76%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland6.08%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen6.08%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.41%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water4.05%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands3.38%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil3.38%
Anaerobic Biogas ReactorEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor2.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.03%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface2.03%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.03%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments2.03%
Anaerobic Enrichment CultureEngineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Anaerobic Enrichment Culture2.03%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.35%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.35%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.35%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.35%
Hydrocarbon Resource EnvironmentsEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments1.35%
SludgeEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Sludge1.35%
Granular SludgeEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge1.35%
Bioremediated Contaminated GroundwaterEngineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater1.35%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.68%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater0.68%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.68%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.68%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine0.68%
SedimentEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Sediment0.68%
Aquifer SolidsEnvironmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Aquifer Solids0.68%
Produced FluidEnvironmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Produced Fluid0.68%
Petroleum ReservoirEnvironmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir0.68%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.68%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge0.68%
Activated SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge0.68%
Wastewater EffluentEngineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent0.68%
Anaerobic Enrichment CultureEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Anaerobic Enrichment Culture0.68%
Wastewater BioreactorEngineered → Bioremediation → Terephthalate → Wastewater → Unclassified → Wastewater Bioreactor0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000032Oil sands microbial community from Northern Alberta which degrade NaphthalineEngineeredOpen in IMG/M
3300000568Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:EngineeredOpen in IMG/M
3300001095Wastewater bioreactor microbial communities from Singapore -Terephthalate degrading community TA BiofilmEngineeredOpen in IMG/M
3300001567Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, CanadaEngineeredOpen in IMG/M
3300001749Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3EnvironmentalOpen in IMG/M
3300002703Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5EngineeredOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003535Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1EnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005325Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-47EngineeredOpen in IMG/M
3300006056Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNAEngineeredOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006360Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Val_03_SludgeMetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300006387Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Oil_02_SludgeMetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300006434T18 (2) (Live), Syntrophic microbial communities from anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom - benzoate enriched in lab, transferred 6 timesEnvironmentalOpen in IMG/M
3300006435T18 (1) (Live), Syntrophic microbial communities from an anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom ? benzoate enriched in lab, transferred 6 timesEnvironmentalOpen in IMG/M
3300006593Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gly_02_SludgeMetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300006651T8 (1) (Live), Syntrophic microbial communities from anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom - benzoate enriched in lab, transferred 6 timesEnvironmentalOpen in IMG/M
3300006652Combined Assembly of Gp0123698, Gp0123960, Gp0123961EnvironmentalOpen in IMG/M
3300006670T14 (3) (Live), Syntrophic microbial communities from anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom - benzoate enriched in lab, transferred 6 timesEnvironmentalOpen in IMG/M
3300006883T10 (1) BES, Syntrophic microbial communities from anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom - benzoate enriched in lab, transferred 6 timesEnvironmentalOpen in IMG/M
3300006887Combined Assembly of Gp0125121, Gp0125656, Gp0125657EnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300007031T18 (2) (Live), Syntrophic microbial communities from anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom - benzoate enriched in lab, transferred 6 timesEnvironmentalOpen in IMG/M
3300007051Combined Assembly of 100bp T18 (BES) Gp0123708, Gp0123962, Gp0123963EnvironmentalOpen in IMG/M
3300008944T18 (1) (Live), Syntrophic microbial communities from an anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom ? benzoate enriched in lab, transferred 6 times DE NOVO (2)EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009542Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A SIP RNA (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300009566Methanogenic o-xylene degrading microbial communities from aquifer solids in Pensacola, Florida - enrichment culture X8-ABEnvironmentalOpen in IMG/M
3300009671Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNAEngineeredOpen in IMG/M
3300009674Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaGEngineeredOpen in IMG/M
3300009685Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaGEngineeredOpen in IMG/M
3300009692Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaGEngineeredOpen in IMG/M
3300009693Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaGEngineeredOpen in IMG/M
3300009694Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW1_MetaGEngineeredOpen in IMG/M
3300009771Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaGEngineeredOpen in IMG/M
3300010236Terrestrial oil reservoir microbial community from Schrader Bluff Formation, Alaska - SB1EnvironmentalOpen in IMG/M
3300010302Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaGEnvironmentalOpen in IMG/M
3300010319Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaGEnvironmentalOpen in IMG/M
3300010346AD_USMOcaEngineeredOpen in IMG/M
3300010347AD_JPHGcaEngineeredOpen in IMG/M
3300010351AD_USPNcaEngineeredOpen in IMG/M
3300010352AD_JPHWcaEngineeredOpen in IMG/M
3300010353AD_USCAcaEngineeredOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012956Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MGEngineeredOpen in IMG/M
3300013088Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200mEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013128 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cmEnvironmentalOpen in IMG/M
3300013129 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cmEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300014206Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaGEngineeredOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300019203Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR2_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019219Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC052_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019222Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR4_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019237Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R1-A RNA time zero (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019247Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC028_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019861Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA - DGG1A 1EngineeredOpen in IMG/M
3300020814Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahitEngineeredOpen in IMG/M
3300021603Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules spadesEngineeredOpen in IMG/M
3300022553Powell_combined assemblyEnvironmentalOpen in IMG/M
3300022556Kivu_combined assemblyEnvironmentalOpen in IMG/M
3300023075Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25EnvironmentalOpen in IMG/M
3300023254Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T75EnvironmentalOpen in IMG/M
3300025136Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025145Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025306Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m (SPAdes)EnvironmentalOpen in IMG/M
3300025677Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025714Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025720Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025856Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025858Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025859Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)EngineeredOpen in IMG/M
3300027715Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027958Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-47 (SPAdes)EngineeredOpen in IMG/M
3300028032Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1EnvironmentalOpen in IMG/M
3300028638Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_HisEngineeredOpen in IMG/M
3300028916Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA. Combined Assembly of Gp0220779, Gp0324998EngineeredOpen in IMG/M
3300028923Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA - DGG0 mspEngineeredOpen in IMG/M
3300029601Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_RA_Trp2 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300029673Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Trp2 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031759Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003PEnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033161Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_09_05-R3EngineeredOpen in IMG/M
3300033173Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_8_08-R1EngineeredOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033743Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Draft_005859513300000032Hydrocarbon Resource EnvironmentsMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Draft_052700813300000032Hydrocarbon Resource EnvironmentsMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTPVELSQSLKEV*
Draft_1001407383300000568Hydrocarbon Resource EnvironmentsMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTTIELNQSLKEV*
JGI12104J13512_102389713300001095Wastewater BioreactorMVYLKYTGLLQYCMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVTIYVQPVKRGEVQIVLAAADSEV*
Draft_1016929313300001567Hydrocarbon Resource EnvironmentsMVRFVRTLQHRVTPHGRDFYALSIPPXVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTPVELSQSLKEV*
JGI24025J20009_1001053093300001749MarineMVRFVRTLQHRVTPQGRDFYQLSIPPQVAEALKLKDGGPVSICVRPVRRDEAQIVLSAADSEG*
draft_1103395323300002703Hydrocarbon Resource EnvironmentsMVRFVRTLQHRVTPQGRGFYSLSIPPQVAEALNLKAGGSVDIIVTPAKKNKFEVTLKPTPVELNQSLKEV*
JGI20214J51088_1006812833300003432WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKTGGQVEIIITPVKKGQYEVTLKPISGE*
JGI20214J51088_1055873613300003432WetlandMHMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGQVAIAVRPVKKDKVEINIKAVE
Ba1_1000195113300003535Petroleum ReservoirMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQQGGNVAITVQPAGKGKFSILLSPVEE*
Ga0031655_1013238223300003852Freshwater Lake SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVTIEVKPIRKGVSEIVLKAGE
Ga0069718_1407955313300004481SedimentYYGSNMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASCDNINP*
Ga0074199_100818923300005325Bioremediated Contaminated GroundwaterMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKDGGKVEIVVSPAKRGRYEVTLKPISKELSYPLKGDSCHGQE*
Ga0075163_1125251713300006056Wastewater EffluentMVRFVRTLQHRVTPQGRDFYSLSIPPQVAEALNLKAGGSVDIIVTPVKKSKFEVTLKPTPVELSQSLKEV*
Ga0079037_10065025333300006224Freshwater WetlandsMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALGLKAGGQVDIIITPVKKGQYEVTLKPISGE*
Ga0079037_10066659923300006224Freshwater WetlandsMVRFVRTLQHRITPQGRDFYALSISPQVAEALGLKAGGNVSICVNPVKKGKFEIILKAVSDDRS*
Ga0079079_107610423300006360Anaerobic Digestor SludgeTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0079069_136183213300006387Anaerobic Digestor SludgeRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0100130_10824123300006434SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASCDNINP*
Ga0099706_10143933300006435SedimentMVRFVRTLQHRVTAKGRDFYALSIPPQVAEALGLQAGGQVTIEVRPVKKGKFEIVLKPLSLGDNLNP*
Ga0079081_111410523300006593Anaerobic Digestor SludgeVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0101725_11342423300006651SedimentMVRFVRTLQHRVTPKGRDFYALSIPPQVAEALNLKAGGAVSICVNPVKKGKFEITLKPASCDNINP*
Ga0101729_100193653300006652SedimentMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTTIELNQSLKEV*
Ga0101737_11444123300006670SedimentMVRFVRTLQHRVTPKGRDFYALSIPPQVAEALNLKAGGAVSICVNPVKKGTFEVTIKAVSDELS*
Ga0102488_11042223300006883SedimentVILRYHMVRFVRTLQHRVTPKGRDFYALSIPPQVAEALNLKAGGAVSICVNPVKTGTFEVTIKAVSDELS*
Ga0102491_10747013300006887SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGTFEVTIKA
Ga0102491_11079133300006887SedimentYYGSNMVRFVRTLQHRVTAKGRDFYALSIPPQVAEALGLQAGGQVTIEVRPVKKGKFEIVLKPLSLGDNLNP*
Ga0079303_1027730313300006930Deep SubsurfaceMVRFVRTLQHRVTPQGRDFFALSIPPQVAEALGLKDGGQVSSCVNPVKKGKFEITLKPASGDKITP*
Ga0079303_1041867913300006930Deep SubsurfaceMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGEVDIIITPVKKGQYEVTLKPTSGE*
Ga0102621_10348953300007031SedimentVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTTIELNQSLKEV*
Ga0102624_12774813300007051SedimentILYYYGSNMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASCDNINP*
Ga0115987_101763813300008944SedimentSNMVRFVITLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASCDNINP*
Ga0102851_1352382123300009091Freshwater WetlandsMVRFVRTLQHRVTPQGRDFYALSIPPQVADALGLKAGGNVSICVNPVKKGKFEITIKPAS
Ga0115026_1025167033300009111WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGQVAIEVRPVKKGKDEIILSKVEGLSESKSGGEFT*
Ga0115026_1071454713300009111WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGQVDIIVTPVKKGQYEVTLKPISGE*
Ga0115027_1036067713300009131WetlandMVRFVRTLQHRVTPKGRDFYALSIPPQVAEALGLKAGGEVDIFITPVKKGQYEVTLKPISGE*
Ga0115027_1104535623300009131WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGQVAIAIRPVKKDKVEITIQAVEE*
Ga0115027_1176566923300009131WetlandMVRFVRTLQHRVTPQGRDFYALSVPPQVAEALDLKAGGSVAICIIPAKKGKFEVVLSKADD*
Ga0113563_1250320913300009167Freshwater WetlandsIRYYYGSNMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGNVSICVNPVKKGKFEITLKPASDDNINP*
Ga0113563_1345925213300009167Freshwater WetlandsMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGPVAIAVRPVKKGKDEIILSKVEGLSESKSGGEFA*
Ga0115028_1046692423300009179WetlandMFRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGNVSICVNPVKKGKFEITL
Ga0115028_1075008823300009179WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGPVAIEVRPVKKGKVEITIQAVEE*
Ga0115028_1084269223300009179WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGNVSICVNPVKKGKFEITLKPASDDNINP*
Ga0114951_1018489913300009502FreshwaterMVRFVRTLQHRVTLQGRDFYALSIPPQVAEAMGLQAGGQVTIEVKPIRKGVSEIVLKASDA*
Ga0116234_106875813300009542Anaerobic Biogas ReactorLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0130025_122999333300009566Aquifer SolidsMVRFVRTLQHRTTPQGHDFYALSIPPQVAEALDLKAGGSVDIIVTPVKKGKFAVTLKPIELS*
Ga0123334_1004432103300009671Anaerobic Biogas ReactorMIRFVRSLQHRTTKQGRDFYALSIPPQVAEALDLKSGGQVSICINPIKKGEVEITLSKAGD*
Ga0116173_102847063300009674Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGSVDIIVAPVKKGKFEVILKAASSELS*
Ga0116173_104422813300009674Anaerobic Digestor SludgeMVRFVRTLQHRVTAQGSDFYALSIPPQVAEALGLQDGGQVDIIVTPGRKGRYEVTINHHQVD*
Ga0116173_105073933300009674Anaerobic Digestor SludgeMVRFVRTLQHRTTSQGHDFYALSIPPQVADALGLQAGGQVTIDVRPAGKGKFEVVLKPESEEE*
Ga0116173_150365423300009674Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGQVNIIVTPGKKGGYEVTLKPTSGG*
Ga0116142_1001524513300009685Anaerobic Digestor SludgeMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVTIYVQPVKRGEVQIVLAAADSEV*
Ga0116171_1013311633300009692Anaerobic Digestor SludgeMVRFVRTLQHRVTSQGRDFYALSIPPQVAEALGLKAGGQVSIEVKPVKKGKFEVTLKPTSEELNQSLKVV*
Ga0116141_10007972103300009693Anaerobic Digestor SludgeMVRFVRTLQHRVTAQGSDFYALSIPPQVAEALNLKAGGPVAIEVRPVKKGKVEIIIVAVEE*
Ga0116170_1018323913300009694Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0116155_1003019243300009771Anaerobic Digestor SludgeMVRFVRTLQHRVTAQGSDFYALSIPPQVAEALHFKQGGKVEIIVSTAPKGKFSVHLQPVDEDQ*
Ga0136246_1000199213300010236Produced FluidMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIRVKPIKRGEVQIILAAADSEV*
Ga0116202_1013468623300010302Anoxic Lake WaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASGDNINP*
Ga0136653_1019390723300010319Anoxic Lake WaterMVRFVRTLQHRVTPQGRDFYALSIPSQVAEALGLKAGGAVSICVNPVKKGKFEVTLKPVSSDNINP*
Ga0136653_1054063923300010319Anoxic Lake WaterMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIQVQPIKRGEVQIV
Ga0116239_1086546123300010346Anaerobic Digestor SludgeMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALGLKDGGQVDIIVTPGKKGRYEVTLKPASGE*
Ga0116238_1037377813300010347Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYSLSIPPQVAEALNLKAGGSVDIIVTPVKKSKFEVTLKPTPVELS
Ga0116248_1031703813300010351Anaerobic Digestor SludgeMVRFVRTLQHRVTPLGRDFYALSIPPQVAEALGLKDGGQVNIIVTPGKKGGYEVTLKPTSGG*
Ga0116248_1090342123300010351Anaerobic Digestor SludgeMVRFVRTLQHRVTAQGHDFYALSIPPQVAEALGLQRGGQVCINVTPLEDGRYEVVLMSEKTNS*
Ga0116247_10004577143300010352Anaerobic Digestor SludgeMVRFVRTLQHRITPQGRDFYALSIPPQVAEALGLKAGGNVSICVNPVKRGKFEITLKPASFDNINP*
Ga0116247_1004714563300010352Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALNLKAGGDVVICVKPVKKGKFEVTIKAASDELS*
Ga0116236_1003015083300010353Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQNGGQVDIFVSPGKKGQYEVALKPTSGE*
Ga0116236_1033389923300010353Anaerobic Digestor SludgeMIRFVRTLQRRVTPQGKDFYSLAIPPQVADALGLKAGGLVAIDVKPVKKGKFEVTISKAGD*
Ga0153915_1001779683300012931Freshwater WetlandsMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQAGGQVTIEVKPIRKGVSEIVLKAKLNQSLKRSN*
Ga0154020_1024703353300012956Active SludgeMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVNIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0163200_100294423300013088FreshwaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKGGGSVDIIVSPVKKGRYEVMIKAASSELS*
(restricted) Ga0172365_1013419433300013127SedimentMVRFVRTLQHRVTSQGRDFYALSIPPQVAEALELKDGGVVSICVNPVKKGKFEITLKPASGDNINP*
(restricted) Ga0172366_1025915033300013128SedimentMFRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGAVSICVNPVKKGKFEITLKPVSSDNINP*
(restricted) Ga0172366_1040887423300013128SedimentMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIQVQPIKRGEVQIVLAAADPGV*
(restricted) Ga0172364_1032717013300013129SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGVVSICVNPVKKGKFEITLKPASGDNINP*
(restricted) Ga0172363_1067391823300013130SedimentMVRFVRTLQHRVTPQWRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASGDNINP*
(restricted) Ga0172362_1017067913300013133SedimentMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIQVQPIKRGEVQIVLAAADSEV*
(restricted) Ga0172362_1034552033300013133SedimentMVRFVRTLQHRITPQWRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASGDNINP*
Ga0172377_1055459513300014206Landfill LeachateMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSIFEVTLKPTPVELSQSLKEV*
Ga0182010_1019753823300014490FenMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQDGGQVSIEVKPIRKDVSEIVLKAGKA*
Ga0182010_1058164713300014490FenRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVTIEVKPIRKGVSEIVLKAGEA*
Ga0182017_1006821253300014494FenMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQDGGQVTIEVRPVKKGMSEIALKASEA*
Ga0182011_10003167123300014496FenMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVTIEVKPIRKGVSEIVLKASDA*
Ga0182011_1030218113300014496FenMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQDGGQVTIEVRPIKKGVSEIVLKAGGA*
Ga0182011_1031270213300014496FenMVHFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQAGGQVTIEVKPIRKGVSEIVLKAIRSN*
Ga0182019_1009303213300014498FenMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQAGGQVTIEVKPIRKGVSEIVLKAKLNQSLKRSN*
Ga0182021_1162911823300014502FenMVHFVRTLQHRTTKQGRDFYALSIPPQVAESLGLQDGGQVTIEVRPVKKGMSEIVLKASEA*
Ga0182021_1298693723300014502FenMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVTIEVKPVKKGVSEIVLKASDA*
Ga0179955_109737613300019203Anaerobic Digestor SludgeMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV
Ga0179942_109542313300019219Anaerobic Digestor SludgeRTLQHRVTPHGRDFYALSTPARLPEALNLKARGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV
Ga0179957_117688943300019222Anaerobic Digestor SludgeRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV
Ga0180028_116235913300019237Anaerobic Biogas ReactorRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVTIYVQPVKRGEVQIVLAAADSEV
Ga0180028_121534143300019237Anaerobic Biogas ReactorPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV
Ga0179937_103935613300019247Anaerobic Digestor SludgeMVRFVRTLQHRVTAQGSDFYALSIPPQVAEALHFKQGGKVEIIVSTAPKGKFSVHLQPVDEDQ
Ga0206388_1003360423300019861Anaerobic Enrichment CultureMVRFVRTLQHRITPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKPASSDNINP
Ga0214088_189322143300020814Granular SludgeMVYLKYTGLLQYCMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVTIYVQPVKRGEVQIVLAAADSEV
Ga0226659_1008785423300021603Granular SludgeMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVTIYVQPVKRGEVQIVLAAADSEV
Ga0212124_1000887483300022553FreshwaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKGGGSVDIIVSPVKKGRYEVMIKAASSELS
Ga0212121_1005324833300022556Anoxic Lake WaterMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIQVQPIKRGEVQIVLAAADPGV
Ga0224520_110676023300023075SoilMVHFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVSIEVKPIRKGVSEIVLKAIRSN
Ga0224524_109246523300023254SoilMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQAGGQVTIEVKPIRKGVSEIVLKAKLNQSLKRSN
Ga0209610_102300823300025136Anoxic Lake WaterMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIQVQPIKRGEVQIVLAAADSEVISY
Ga0209609_1024414913300025145Anoxic Lake WaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGVVSICVNPVKKGKFEITLK
Ga0208045_112798513300025306FreshwaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGAVDIIVQPIKKGRYEVMIKAASSELS
Ga0209719_110739113300025677Anaerobic Digestor SludgeVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV
Ga0208458_101826863300025714Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGSVDIIVAPVKKGKFEVILKAASSELS
Ga0208458_114504223300025714Anaerobic Digestor SludgeMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTPVELSQSLKEV
Ga0208197_1006602123300025720Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYSLSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVEL
Ga0209604_1003570123300025856Anaerobic Digestor SludgeMVRFVRTLQHRVTAQGSDFYALSIPPQVAEALNLKAGGPVAIEVRPVKKGKVEIIIVAVE
Ga0209099_101089443300025858Anaerobic Digestor SludgeMVRFVRTLQHRITPQGRDFYALSIPPQVAEALGLKAGGNVSICVNPVKRGKFEITLKPASFDNINP
Ga0209099_110046113300025858Anaerobic Digestor SludgeMVRFVRTLQHRVTSQGRDFYALSIPPQVAEALGLKAGGQVSIEVKPVKKGKFEVTLKPTSEELNQSLKVV
Ga0209096_103238333300025859Anaerobic Digestor SludgeMVRFVRTLQHRVTPQGRDFYSLSIPPQVAEALNLKAGGSVDIIVTPVKKSKFEVTLKPT
Ga0208665_1029972023300027715Deep SubsurfaceMHMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALNLKAGGPVAICIIPAKKGKFEIVLSS
Ga0209450_1127465013300027885Freshwater Lake SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEITLKTASGDNINP
Ga0209496_1035515413300027890WetlandMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGEVDIIITPVKKGQYEVTLKPISGE
Ga0209749_101468823300027958Bioremediated Contaminated GroundwaterMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKDGGKVEIVVSPAKRGRYEVTLKPISKELS
Ga0265296_1000830263300028032GroundwaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALNLKAGGVVSLCVNPVKKGKFEVTIKAVSYELS
Ga0265296_1001168173300028032GroundwaterMVRFLRTLQHRVTAHGRDFYALSIPPQVAEALGLQAGGQVTIEVRPVKKGKFEIVLKPLSLEDNINH
Ga0302240_108297813300028638Activated SludgeMVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSL
Ga0310376_100478713300028916Anaerobic Enrichment CultureVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKGRYEVALKPTPVELSQSLKEV
Ga0310376_103018713300028916Anaerobic Enrichment CultureVRFVRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVEIIVSAVKKGKFEVVISKAGD
Ga0310375_105242213300028923Anaerobic Enrichment CultureMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQAGGEVSICVNPVKKGKFEITLK
Ga0307371_13085113300029601Anaerobic Digestor SludgeRTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLNPTPVELSQSLKEV
Ga0307355_12270313300029673Anaerobic Digestor SludgeTLQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVTPVKKSKFEVTLKPTPVELSQSLKEV
Ga0311350_1207000023300030002FenMVRFVRTLQHRVTPQGRDFYALSNPPQVAEALGLKAGGTVDIIVSPVKKGKFEIVLKSLSDGNLSS
Ga0302323_10218754313300031232FenMVHFVRTLQHRTTKQGRDFYALSIPPQVAESLGLQDGGQVTIEVRPVKKGMSEIVLKASE
Ga0316219_101298123300031759FreshwaterMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGTVDIIVSPVKKGKFEIVLKSLSDGNLSS
Ga0302322_10077732213300031902FenMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVTIEVKPVKKGVSEIVLKASD
Ga0315292_1008711263300032143SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQAGGEVSICVNPVKKGKFEITLKPASVDNINP
Ga0315286_1180240113300032342SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALDLKNGGVVSICVNPVKKGKFEIILKPASSDNINP
Ga0315287_1148780323300032397SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALELKDGGQVSICVNPVKKGKFEIILKPASSDNINP
Ga0315275_1025566413300032401SedimentMVRFVRTLQHRVTAQGRDFYALSIPPQVAEALDLKNGGVVSICVNPVKKGKFEIILKPASSDNINP
Ga0315275_1032108523300032401SedimentMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQAGGQVSICVNPVKKGKFEITLKPASFDNINP
Ga0334893_1003397123300033161SludgeMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIRVQPIKRGEVQIILAAADSEV
Ga0334889_105444723300033173SludgeMVYLKYTGLLQYCMVRFVRTLQHRITKQGRDFYQLSIPPQVAEALNLKDGGPVSIRVQPIKRGEVQIILAAADSEV
Ga0316603_1186126613300033413SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGNVSICVNPVKKGKFEITLKPASDDNINP
Ga0316619_1121276113300033414SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGNVSICVNPVKKGKFEITLKPAFDDNIHP
Ga0316625_10089011423300033418SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGAVSICVNPVKKGKFEITLKPASDDNINP
Ga0316627_10197529713300033482SoilMRFVRTLQRRVTPSGTDFYALSIPPQVAQSLGLQDGGQVIIEVIPVAKGKSEIVI
Ga0316616_10031467613300033521SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGNVSICVNPVKKGKFEITLKPASRDKITP
Ga0316616_10231171723300033521SoilMVRFVRTLQHRVTPQGSDFYALSIPPQVAEALGLKAGGQVDIIITPVKKGQYEVTLKPISGE
Ga0316617_10133378913300033557SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKDGGNVSICVNPVKKGKFEITLKP
Ga0316617_10170159013300033557SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLKAGGQVDIIITPVKKGQYEVTLKPISGE
Ga0334844_034845_660_8453300033743SoilMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQDGGQVTIEVRPIKKGVSEIVLKAGG
Ga0334844_046847_474_6593300033743SoilMVHFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQAGGQVTIEVKPIRKGVSEIVLKAGE
Ga0334844_086873_393_5783300033743SoilMVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQDGGQVTIEVKPIRKGVSEIVLKASD
Ga0370481_0069453_171_3563300034281Untreated Peat SoilMVHFVRTLQHRTTKQGRDFYALSIPPQVAESLGLQDGGQVTIEVRPVKKDVSEIVLKASD
Ga0370481_0272187_429_6083300034281Untreated Peat SoilMVHFVRTLQHRTTKQGRDFYALSIPPQVAEALGLQDGGQVSIEVKPIRKGVSEIVLKAGG


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