NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300003535

3300003535: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1



Overview

Basic Information
IMG/M Taxon OID3300003535 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0112330 | Gp0107643 | Ga0060329
Sample NamePetroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1
Sequencing StatusPermanent Draft
Sequencing Center
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size88315047
Sequencing Scaffolds11
Novel Protein Genes13
Associated Families13

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria2
Not Available3
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin0091
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NamePetroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biome → oil reservoir → oil
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationBrazil: State of Bahia
CoordinatesLat. (o)-12.2Long. (o)-38.11Alt. (m)N/ADepth (m)500 to 1000
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F023356Metagenome / Metatranscriptome210Y
F025288Metagenome / Metatranscriptome202N
F029455Metagenome / Metatranscriptome188Y
F029922Metagenome / Metatranscriptome187Y
F031475Metagenome / Metatranscriptome182N
F038519Metagenome165Y
F048287Metagenome / Metatranscriptome148N
F048390Metagenome / Metatranscriptome148Y
F070092Metagenome123N
F079376Metagenome / Metatranscriptome116Y
F092111Metagenome / Metatranscriptome107Y
F095523Metagenome / Metatranscriptome105N
F103105Metagenome / Metatranscriptome101Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ba1_1000178All Organisms → cellular organisms → Bacteria2782Open in IMG/M
Ba1_1000195Not Available12769Open in IMG/M
Ba1_1002162All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.848Open in IMG/M
Ba1_1002337Not Available24572Open in IMG/M
Ba1_1013457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei2235Open in IMG/M
Ba1_1020657All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin0091258Open in IMG/M
Ba1_1021392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi566Open in IMG/M
Ba1_1028087Not Available941Open in IMG/M
Ba1_1036409All Organisms → cellular organisms → Bacteria762Open in IMG/M
Ba1_1038387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium709Open in IMG/M
Ba1_1069077All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon837Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ba1_1000178Ba1_10001781F023356MSENSLKKAVLKSRASAAEAEVMSTELKKSKVITLRVEEPLFKAIEAQAELWNVKPAETIRRVLRFYFLPGALEMQLRGESEKFWKGELTPEALREYMVFTLEATGKLSSSALFLKGEASRLSEALEGKLSEALKEEREGAEP*
Ba1_1000178Ba1_10001785F048287MIDTLKLMLSDYEVSPESSVRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLTREEGSSKTLGELYEELRGKVCELAGRN*
Ba1_1000195Ba1_100019511F048390MVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQQGGNVAITVQPAGKGKFSILLSPVEE*
Ba1_1002162Ba1_10021622F092111MTPEEGNDVREMVWEMSRTTNKILIFGIILILAILAVLIYLGILSFPSLAN*
Ba1_1002337Ba1_10023373F029455MTESKRIVDIDLWEDGTADRLPKITVTGAGLRFEGERAEFDRLCLILGGWLKP*
Ba1_1002337Ba1_10023378F038519MKFRKSIIMQMHVIAYEPSADWAGPYTNQELLKRTLAIIQQVDRTAEVISKETDPWAEQILAGLLPYKIHVDLVDGMPQLPAAVSITWPPAQLEGIQIGSQEFREYFVWAKSEVAALRKLATLNKTPSAAKPAAATEEA*
Ba1_1013457Ba1_10134574F103105VIPAPYNSWPVVMSTNKAAQLLGVDRKTLAKNKNMLARCSETIGGKSKVIRDRLLRELKII*
Ba1_1020657Ba1_10206572F095523MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRHDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVERITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAIGLLGAVGVTIYIISLAAG*
Ba1_1021392Ba1_10213921F031475LGSSMDAKTSDSSQDSLNANPQKQCEKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP*
Ba1_1028087Ba1_10280871F070092MAINDRLKPVMELLETNRQKIGLMISHGMASDLAIERRKKELYHEVMTAKENAFKEELADLEGEIRKIEDSYREPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRIRGLDEEADLTWDHAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKFLDGTNNAVYISETLKYKGG*
Ba1_1036409Ba1_10364092F079376MFDTMITRQPGRPCVSLGVTRVCRTTEEVGRQMRHRESDSFVVPVKAGNAAGGKEATHVSAM*
Ba1_1038387Ba1_10383871F025288MKNKWIWITLSVILLLGLIAGAGALGYLMGLRNANALALQGDDNTPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAVLLLVVWLVVKVAKAAWDGGNHKAKSTEATVSSAGIETIVTEAPASPSEPTNTVGSDQQ*
Ba1_1069077Ba1_10690771F029922SIDVLDKRMISGLPTLSREELYNFNIIDLSEMIMAIEHAISYTEGYRFLLLCFGNEGSSDKAKMIMKSMEDYLELVKDVYRFKVNEKKKRMAFLKGEFVRG*
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