Metagenome / Metatranscriptome Family F043157

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043157
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	46 residues
Representative Sequence	MSILDERFRDCICLNIYDRIDSMQMLGELIMIKRAKSLERRIR
Number of Associated Samples	89
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.26 %
% of genes near scaffold ends (potentially truncated)	25.48 %
% of genes from short scaffolds (< 2000 bps)	78.34 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.255 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (14.650 % of family members)
Environment Ontology (ENVO)	Unclassified (35.032 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.395 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF01502	PRA-CH	5.10
PF09479	Flg_new	5.10
PF00977	His_biosynth	1.91
PF01797	Y1_Tnp	1.27
PF01833	TIG	0.64
PF01144	CoA_trans	0.64
PF07581	Glug	0.64
PF13540	RCC1_2	0.64
PF01713	Smr	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG0139	Phosphoribosyl-AMP cyclohydrolase	Amino acid transport and metabolism [E]	5.10
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.27
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.64
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.64
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.53 %
Unclassified	root	N/A	18.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.53 %
Unclassified	root	N/A	18.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.25 %
Unclassified	root	N/A	18.47 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.61 %
Unclassified	root	N/A	18.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.46 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.27 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	65.61 %
Unclassified	root	N/A	18.47 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.27 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.47 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.18 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.27 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.27 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.64 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.27 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.64 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.64 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.27 %
Spongiibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter	0.64 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.64 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.27 %
Spongiibacter tropicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter tropicus	0.64 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.64 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001371\|BBDRAFT_10354051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1551	Open in IMG/M
3300001751\|JGI2172J19969_10116782	Not Available	766	Open in IMG/M
3300001752\|JGI2173J19968_10123285	Not Available	741	Open in IMG/M
3300002053\|SMTZ23_10025351	All Organisms → cellular organisms → Bacteria	8282	Open in IMG/M
3300004029\|Ga0055442_10290312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	560	Open in IMG/M
3300004324\|Ga0066229_100145	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300004324\|Ga0066229_100707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300004324\|Ga0066229_102258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	749	Open in IMG/M
3300004324\|Ga0066229_102424	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300004324\|Ga0066229_103416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	646	Open in IMG/M
3300004326\|Ga0066230_101107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	979	Open in IMG/M
3300004326\|Ga0066230_104110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	618	Open in IMG/M
3300004331\|Ga0066232_102219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	777	Open in IMG/M
3300004331\|Ga0066232_102656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	728	Open in IMG/M
3300004333\|Ga0066237_100586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300004336\|Ga0066242_1000502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1284	Open in IMG/M
3300004336\|Ga0066242_1000650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → Spongiibacter → Spongiibacter tropicus	1176	Open in IMG/M
3300004336\|Ga0066242_1003560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	704	Open in IMG/M
3300004338\|Ga0066227_1004668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	657	Open in IMG/M
3300004338\|Ga0066227_1009975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	506	Open in IMG/M
3300004340\|Ga0066239_1006735	Not Available	590	Open in IMG/M
3300004341\|Ga0066228_1009714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	508	Open in IMG/M
3300005821\|Ga0078746_1031191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1119	Open in IMG/M
3300005821\|Ga0078746_1108680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	644	Open in IMG/M
3300005822\|Ga0078744_1008029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2387	Open in IMG/M
3300005822\|Ga0078744_1051406	Not Available	927	Open in IMG/M
3300005822\|Ga0078744_1068372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	810	Open in IMG/M
3300005822\|Ga0078744_1120944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	624	Open in IMG/M
3300005823\|Ga0078745_1107836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	791	Open in IMG/M
3300005832\|Ga0074469_10417295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1402	Open in IMG/M
3300007900\|Ga0111031_1004056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1652	Open in IMG/M
3300009039\|Ga0105152_10349463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	619	Open in IMG/M
3300009150\|Ga0114921_11048281	Not Available	608	Open in IMG/M
3300009509\|Ga0123573_10531239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1117	Open in IMG/M
3300009509\|Ga0123573_10600914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1040	Open in IMG/M
3300009529\|Ga0114919_10342141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1045	Open in IMG/M
3300009581\|Ga0115600_1113343	Not Available	587	Open in IMG/M
3300009582\|Ga0115601_1079773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	987	Open in IMG/M
3300010413\|Ga0136851_10225744	Not Available	1923	Open in IMG/M
3300010995\|Ga0139323_128374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	833	Open in IMG/M
3300010997\|Ga0139324_1061328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	856	Open in IMG/M
3300011118\|Ga0114922_10248154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1493	Open in IMG/M
3300011118\|Ga0114922_11263084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	596	Open in IMG/M
3300012931\|Ga0153915_10919446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1017	Open in IMG/M
3300012931\|Ga0153915_11145662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	908	Open in IMG/M
3300012931\|Ga0153915_11917870	Not Available	693	Open in IMG/M
3300012931\|Ga0153915_13090490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	541	Open in IMG/M
3300012964\|Ga0153916_10095814	Not Available	2800	Open in IMG/M
3300012964\|Ga0153916_10549244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1229	Open in IMG/M
3300012964\|Ga0153916_10685564	Not Available	1103	Open in IMG/M
3300012964\|Ga0153916_11449266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	762	Open in IMG/M
3300012964\|Ga0153916_11629887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	719	Open in IMG/M
3300012964\|Ga0153916_13072528	Not Available	525	Open in IMG/M
3300013078\|Ga0153914_1245157	Not Available	825	Open in IMG/M
3300013078\|Ga0153914_1287828	Not Available	560	Open in IMG/M
3300013080\|Ga0153913_1221425	Not Available	565	Open in IMG/M
3300013080\|Ga0153913_1295086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	722	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10033540	All Organisms → cellular organisms → Bacteria	3532	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10037186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3320	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10116340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1694	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10348283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	874	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10537399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	672	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10714228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	567	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10235826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1158	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10390185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	849	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10805045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	625	Open in IMG/M
3300017963\|Ga0180437_10015698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	8641	Open in IMG/M
3300017963\|Ga0180437_10075321	Not Available	2969	Open in IMG/M
3300017963\|Ga0180437_10177068	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1701	Open in IMG/M
3300017971\|Ga0180438_10036061	All Organisms → cellular organisms → Bacteria	4954	Open in IMG/M
3300017971\|Ga0180438_10088492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2703	Open in IMG/M
3300018080\|Ga0180433_11104917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300018089\|Ga0187774_10026087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2369	Open in IMG/M
3300019234\|Ga0172288_1082535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1120	Open in IMG/M
3300019234\|Ga0172288_1187840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	869	Open in IMG/M
3300019234\|Ga0172288_1484478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1144	Open in IMG/M
3300019234\|Ga0172288_1487393	Not Available	628	Open in IMG/M
3300019245\|Ga0187791_1294130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300019246\|Ga0172287_1147594	All Organisms → cellular organisms → Bacteria → Proteobacteria	1107	Open in IMG/M
3300019246\|Ga0172287_1209055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	825	Open in IMG/M
3300019246\|Ga0172287_1224023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	587	Open in IMG/M
3300019246\|Ga0172287_1320053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	607	Open in IMG/M
3300019250\|Ga0187790_1019799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	637	Open in IMG/M
3300019250\|Ga0187790_1395889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	880	Open in IMG/M
3300019252\|Ga0172286_1440818	Not Available	643	Open in IMG/M
3300019252\|Ga0172286_1501323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	586	Open in IMG/M
3300022185\|Ga0079039_1419248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	509	Open in IMG/M
3300022208\|Ga0224495_10008300	All Organisms → cellular organisms → Bacteria	5648	Open in IMG/M
3300024433\|Ga0209986_10103682	Not Available	1541	Open in IMG/M
3300025794\|Ga0209102_1008642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2852	Open in IMG/M
3300027740\|Ga0214474_1029184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2151	Open in IMG/M
3300027742\|Ga0209121_10223793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	659	Open in IMG/M
3300027811\|Ga0256868_10387005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	565	Open in IMG/M
3300027814\|Ga0209742_10232409	Not Available	606	Open in IMG/M
3300027888\|Ga0209635_10135252	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300027888\|Ga0209635_10639051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	788	Open in IMG/M
3300027888\|Ga0209635_10906553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	620	Open in IMG/M
3300027893\|Ga0209636_10597646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	888	Open in IMG/M
3300027893\|Ga0209636_11274041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	511	Open in IMG/M
3300027900\|Ga0209253_10264806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1347	Open in IMG/M
3300027901\|Ga0209427_10727855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	712	Open in IMG/M
3300027917\|Ga0209536_100082328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4124	Open in IMG/M
3300029827\|Ga0134606_10019710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2454	Open in IMG/M
3300030613\|Ga0299915_10476771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	823	Open in IMG/M
3300030714\|Ga0307925_106772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1414	Open in IMG/M
3300030717\|Ga0307927_1027313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	780	Open in IMG/M
3300031255\|Ga0315554_1057565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1545	Open in IMG/M
3300031257\|Ga0315555_1241898	Not Available	699	Open in IMG/M
3300031356\|Ga0307439_1020891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2761	Open in IMG/M
3300031358\|Ga0307438_1014572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3320	Open in IMG/M
3300031554\|Ga0315544_1001442	All Organisms → cellular organisms → Bacteria	18517	Open in IMG/M
3300031620\|Ga0315552_1230078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	539	Open in IMG/M
3300031698\|Ga0315537_1029514	Not Available	3251	Open in IMG/M
3300031746\|Ga0315293_10594670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	839	Open in IMG/M
3300031772\|Ga0315288_10033819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6223	Open in IMG/M
3300031885\|Ga0315285_10008069	All Organisms → cellular organisms → Bacteria	10811	Open in IMG/M
3300031952\|Ga0315294_10016308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8104	Open in IMG/M
3300031952\|Ga0315294_10128507	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2594	Open in IMG/M
3300032020\|Ga0315296_10009978	All Organisms → cellular organisms → Bacteria	7233	Open in IMG/M
3300032029\|Ga0315546_1003832	All Organisms → cellular organisms → Bacteria	7906	Open in IMG/M
3300032046\|Ga0315289_10210659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2110	Open in IMG/M
3300032046\|Ga0315289_10527372	Not Available	1125	Open in IMG/M
3300032143\|Ga0315292_11427738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	563	Open in IMG/M
3300032156\|Ga0315295_10275662	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300032156\|Ga0315295_11096658	Not Available	785	Open in IMG/M
3300032168\|Ga0316593_10005239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3402	Open in IMG/M
3300032168\|Ga0316593_10007060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3066	Open in IMG/M
3300032168\|Ga0316593_10018192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2156	Open in IMG/M
3300032168\|Ga0316593_10019419	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300032168\|Ga0316593_10028812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1792	Open in IMG/M
3300032168\|Ga0316593_10047568	Not Available	1443	Open in IMG/M
3300032168\|Ga0316593_10074919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1174	Open in IMG/M
3300032168\|Ga0316593_10093563	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300032168\|Ga0316593_10140481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	875	Open in IMG/M
3300032168\|Ga0316593_10190031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	757	Open in IMG/M
3300032168\|Ga0316593_10306291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	602	Open in IMG/M
3300032168\|Ga0316593_10320184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	589	Open in IMG/M
3300032168\|Ga0316593_10386591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	539	Open in IMG/M
3300032168\|Ga0316593_10452452	Not Available	501	Open in IMG/M
3300033416\|Ga0316622_100812250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1087	Open in IMG/M
3300033480\|Ga0316620_10016596	All Organisms → cellular organisms → Bacteria	4246	Open in IMG/M
3300033480\|Ga0316620_10115678	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300033513\|Ga0316628_100104318	All Organisms → cellular organisms → Bacteria	3189	Open in IMG/M
3300033524\|Ga0316592_1044264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	989	Open in IMG/M
3300033524\|Ga0316592_1071836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300033528\|Ga0316588_1057028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	951	Open in IMG/M
3300033528\|Ga0316588_1132048	Not Available	635	Open in IMG/M
3300033528\|Ga0316588_1142098	Not Available	614	Open in IMG/M
3300033529\|Ga0316587_1019960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1136	Open in IMG/M
3300033529\|Ga0316587_1055827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	727	Open in IMG/M
3300033541\|Ga0316596_1014959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1930	Open in IMG/M
3300033541\|Ga0316596_1189401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	571	Open in IMG/M
3300033991\|Ga0334965_0275285	Not Available	649	Open in IMG/M
3300034083\|Ga0373901_083391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	656	Open in IMG/M
3300034089\|Ga0373913_0081424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	862	Open in IMG/M
3300034089\|Ga0373913_0108542	Not Available	759	Open in IMG/M
3300034191\|Ga0373909_0103133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	861	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.80%
Host-Associated	Host-Associated	14.65%
Engineered	Engineered	2.55%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	74.52%
Plants	Host-Associated → Plants	14.65%
Terrestrial	Environmental → Terrestrial	8.28%
Bioremediation	Engineered → Bioremediation	2.55%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	34.39%
Freshwater	Environmental → Aquatic → Freshwater	33.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.65%
Soil	Environmental → Terrestrial → Soil	8.28%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.82%
Sediment	Environmental → Aquatic → Sediment	2.55%
Metal	Engineered → Bioremediation → Metal	2.55%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.64%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	20.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.65%
Lake	Environmental → Aquatic → Freshwater → Lake	14.01%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.37%
Coastal	Environmental → Aquatic → Marine → Coastal	5.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.10%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.55%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	2.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.91%
Clay	Environmental → Terrestrial → Soil → Clay	1.27%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.64%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.64%
Sediment	Environmental → Aquatic → Marine → Sediment	0.64%
Oil Seeps	Environmental → Aquatic → Marine → Oil Seeps	0.64%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.64%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	20.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	14.01%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.64%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	5.73%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.10%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.55%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	2.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.27%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	1.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.27%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.64%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Marine → Oil Seeps → Unclassified	0.64%
Microbial Mats	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats	0.64%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.64%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	14.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.38%
Mangrove Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Sediment	10.83%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	7.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	6.37%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	6.37%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	5.73%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	3.82%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	3.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.18%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	3.18%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.55%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	2.55%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.91%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.27%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.64%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.64%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	0.64%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.64%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.64%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.64%
Marine	Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine	0.64%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat	0.64%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001371	Baker-B-sed	Environmental	Open in IMG/M
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001752	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental	Open in IMG/M
3300004029	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2	Environmental	Open in IMG/M
3300004324	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC1C	Environmental	Open in IMG/M
3300004326	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC2A	Environmental	Open in IMG/M
3300004331	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC2C	Environmental	Open in IMG/M
3300004333	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC3C	Environmental	Open in IMG/M
3300004336	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC4C	Environmental	Open in IMG/M
3300004338	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC1A	Environmental	Open in IMG/M
3300004340	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC4A	Environmental	Open in IMG/M
3300004341	Sediment microbial communities from the mangroves in Sao Paulo State, Brazil - MgvRC1B	Environmental	Open in IMG/M
3300005821	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1	Environmental	Open in IMG/M
3300005822	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, MM1	Environmental	Open in IMG/M
3300005823	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300007900	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf. Combined Assembly of MM1PM1	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009150	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009581	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009582	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010995	ECM14MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300010997	ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013078	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013080	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019234	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019246	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019252	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300025794	Hot spring microbial mat communities from California, USA to study Microbial Dark Matter (Phase II) - Cone Pool mat layer H metaG (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027742	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029827	Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300030714	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030717	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031257	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-80	Environmental	Open in IMG/M
3300031356	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-90	Environmental	Open in IMG/M
3300031358	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-110	Environmental	Open in IMG/M
3300031554	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-130	Environmental	Open in IMG/M
3300031620	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-70	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032029	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-170	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032168	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033524	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033528	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033529	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033541	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M
3300034089	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.2	Engineered	Open in IMG/M
3300034191	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BBDRAFT_103540512	3300001371	Marine Estuarine	MVGDRLMSILDERFRDCICLNIYDRIDSMRMLGELIMITRAKSLERRIR*
JGI2172J19969_101167823	3300001751	Marine Sediment	MVGERLMSISDERFRNCVCLNIYDRIDSMPMLGELIMINGANSLERRIR*
JGI2173J19968_101232851	3300001752	Marine Sediment	KLMGISDERFRNCVCLNIYDRIDSMLMLGELIMINGANSLERRIR*
SMTZ23_100253517	3300002053	Marine Sediment	MSILDERFRDCICLNIYDGIDSMRMLGELVMRKRAKSLERRIR*
Ga0055442_102903122	3300004029	Natural And Restored Wetlands	MSILDERFRNCICLSNYSRIESMQMLGELVMIERAKSLERRIR*
Ga0066229_1001453	3300004324	Mangrove Sediment	MGILDERFRGCICLKICDRIESMQMLGELITMKRAKSLERRIR*
Ga0066229_1007071	3300004324	Mangrove Sediment	LMGILDEHFRDCICLRMGDRIDSMQMLGEIVMIRRAKSLERRIR*
Ga0066229_1022581	3300004324	Mangrove Sediment	VVGDRLISILDERFRNCICLSIYDRIESMRMPGELIVIKRAKSLERRIR*
Ga0066229_1024242	3300004324	Mangrove Sediment	MVGDRLMSIFDEHFRNCICLNIYERIYGMQMLGESIMIKMAKGLERRIS*
Ga0066229_1034162	3300004324	Mangrove Sediment	MGILDEHFRDCICLNIYDRIDSMQMLGESIMIKWAESLERRIR*
Ga0066230_1011072	3300004326	Mangrove Sediment	VVGDRLMSILDERFRDCICLNMYDRIDSMQMLGELVMIKRAKSLERRIR*
Ga0066230_1041102	3300004326	Mangrove Sediment	MGILDERFRDCICLNMYDRIDSMQMLGELTMIKRAKSLERRIR
Ga0066232_1022192	3300004331	Mangrove Sediment	MRILDERFRNYICLNIYDRIDSMKMLGELIMIKGANSLERRIR*
Ga0066232_1026561	3300004331	Mangrove Sediment	MRILGEHFRDCICPNIYHRIDSMQMRGELIMIKWAKSLERRIR*
Ga0066237_1005861	3300004333	Mangrove Sediment	VDGDIPMSILDERFRNCICLSNYNRIESMQMLGELIIIERAKSLERRIR*
Ga0066242_10005022	3300004336	Mangrove Sediment	MGGERLMSILDERFRDCICLKIYDRTDSMRVLGELIMIKGAKSLERRIR*
Ga0066242_10006503	3300004336	Mangrove Sediment	MSILDERFRDCICLNIYDRINSMQMLGELIMTNRAKSLERR
Ga0066242_10035601	3300004336	Mangrove Sediment	MSILDERFRNCICLSIYDRIESMRMPGELLMIKRAKSLERR
Ga0066227_10046682	3300004338	Mangrove Sediment	VVGDRLMGILDERFRNCMCLNMYDRIDGMQMLGELVIIKRAKSLERRIR*
Ga0066227_10099752	3300004338	Mangrove Sediment	MGILDEHFRNCICLRIGDRIDSMQMLGEIVMIERAKSLERRIR*
Ga0066239_10067352	3300004340	Mangrove Sediment	IFDERFRDCICLNIYDRIDGMQMPGESIMIKMAKGLERRIS*
Ga0066228_10097141	3300004341	Mangrove Sediment	MSILDELFRNCICLNIYDRIESMRMLEGLLMIKRAKSLERRIR*
Ga0078746_10311912	3300005821	Marine Sediment	VVGDRLMSILDEHFRNCICLNIYDRIESMQMLGELIMTNRAKSLERRIR*
Ga0078746_11086802	3300005821	Marine Sediment	VVGDKLMGILDERFRDCICLNIYDRIESMQMLGELIMTNRAKSLERRIR*
Ga0078744_10080293	3300005822	Marine Sediment	MSILDEHFRNCICLNIYDRIESMQMLGELIMTNRAKSLERRIR*
Ga0078744_10514062	3300005822	Marine Sediment	ESGFYRPGCRHIRLEPRFVVGDKLMGILDERFRNCICLKTYDRIESMQMLGELTMIKRAKSLERRIR*
Ga0078744_10683722	3300005822	Marine Sediment	MGILDERFRDCICLNIYDRIDSMQMLGELIMTNRAKSLERRIR*
Ga0078744_11209442	3300005822	Marine Sediment	MSILDEHFRDCICLRIGDRIDSMQMLGELIMEKRAKSLERRIR*
Ga0078745_11078362	3300005823	Marine Sediment	VVGDRLMSILDEHFRDCICLRIGDRIDSMQMLGELIMEKRAKSLERRIR*
Ga0074469_104172952	3300005832	Sediment (Intertidal)	MVGDRLMNISDERFRDRICLNIYDRIDSMQMLGELIMIKGAKSLERRIR*
Ga0111031_10040563	3300007900	Marine Sediment	VVGDRLMGILDERFRDCICLNIYDRINSMQMLGELMMTNRAKSLERRIR*
Ga0105152_103494632	3300009039	Lake Sediment	MGILDERFRDCICLNIYDRIDSMQMLGELIMIKRAKKLERRIR*
Ga0114921_110482812	3300009150	Deep Subsurface	MVGERLMRISDDRFRNCVCLNIYNYNRIDCMRMLGELIMIKRTKSLERRIR*
Ga0123573_105312392	3300009509	Mangrove Sediment	VAGDTVMSILDEHFRDCICLNIYDGINSMRMLGELVMIKRAKSLERRIR*
Ga0123573_106009142	3300009509	Mangrove Sediment	VGGDTLVSILDERFRDCICLSNYNRIESMQMLGELIMIERAKSLERRIR*
Ga0114919_103421412	3300009529	Deep Subsurface	MSILDEHFRDCICLNIYNYNRIDCMRMLGELIMIKRTKSLERRIR*
Ga0115600_11133431	3300009581	Wetland	ISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR*
Ga0115601_10797731	3300009582	Wetland	MGISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR*
Ga0136851_102257441	3300010413	Mangrove Sediment	MSILDERFRNCICLSNYNRIESMQMLGELIMIERAKSLERRI
Ga0139323_1283742	3300010995	Sediment	MSILDERFRDCICLNIYDRIDSMQMLGELIMIKRAKSLERRIR*
Ga0139324_10613282	3300010997	Sediment	MVGERLMRILDERFRNCICLNIYDRIDSMQMLGELIMIRRAKSLERRIR*
Ga0114922_102481542	3300011118	Deep Subsurface	MGISDERFRDCICLNIYDRINSMQMLGELTMIKGVKSLERRIR*
Ga0114922_112630842	3300011118	Deep Subsurface	VVGDKLMGILDERFRNCICLKTYDRIESMQMLGELTMIKRAKSLERRIR*
Ga0153915_109194461	3300012931	Freshwater Wetlands	MSILDERFRDYICLNIYDRIDSMQMLGELIMIKRAKSLERRIR*
Ga0153915_111456621	3300012931	Freshwater Wetlands	MGISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRI
Ga0153915_119178702	3300012931	Freshwater Wetlands	FMVGDRLMGILDEHFRDGICLNIYDRIDSMQMLGELVMIKRAKSLERRIR*
Ga0153915_130904902	3300012931	Freshwater Wetlands	MRISDERFRDCICLNIYDRIDSMQMLGELVMIKRAK
Ga0153916_100958144	3300012964	Freshwater Wetlands	MGIFDEHFRDCICLNIYDRIDSMQMLEGLVMIKRAKSLERRIR*
Ga0153916_105492442	3300012964	Freshwater Wetlands	MGILDEHFRDCICLNIYDRIDSMQMLRLIAIKRAKSLERRIR*
Ga0153916_106855642	3300012964	Freshwater Wetlands	LELRFMVGDRLMRIADERFRDCICLNIYDRIDSMQMLGEFVMIKRAKSLERRIR*
Ga0153916_114492661	3300012964	Freshwater Wetlands	MRIADERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLER
Ga0153916_116298871	3300012964	Freshwater Wetlands	MSILDERFRDCICLNIYDRIDSMQMLESIMIKRAKSLERRIR*
Ga0153916_130725281	3300012964	Freshwater Wetlands	RFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR*
Ga0153914_12451573	3300013078	Freshwater Wetlands	DCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR*
Ga0153914_12878282	3300013078	Freshwater Wetlands	MVVDRLMRISDERFRDCICLNIYDRIDSMQMLRELVMIKRAKSLERRIR*
Ga0153913_12214251	3300013080	Freshwater Wetlands	SDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSFERRIR*
Ga0153913_12950862	3300013080	Freshwater Wetlands	MSILDERFRDCTCLNIYDRIDSMQMLELIVIKRAKSLERRIS*
(restricted) Ga0172365_100335403	3300013127	Sediment	MGILDEHFRDCICLNIYDRIESMQMREELVMIKRAKSLERRIR*
(restricted) Ga0172365_100371867	3300013127	Sediment	CRHIRLEPRVVVGDRLMGILDERFRDCICLNIYDRIDSMRVLGELIMANRAKSLERRIR*
(restricted) Ga0172365_101163402	3300013127	Sediment	MGILDERFRDCICLNIYDRIDSMRVLGELLMANRAKSLERRIR*
(restricted) Ga0172365_103482832	3300013127	Sediment	MGILDERFRDCICLNICDGIKSMQMLGELTMIKRAKSLERRIR*
(restricted) Ga0172365_105373992	3300013127	Sediment	MVGDRLMSILDEHFRDCICLNICDRIESMQMREELVMIKRAKS
(restricted) Ga0172365_107142281	3300013127	Sediment	MGILDEHFRDCICLNIYDRIESMKMLGESIMIKRAKSLERRIR*
(restricted) Ga0172366_102358263	3300013128	Sediment	MSILDEHFRDCICLNIYDRIDSMQMREELVMIKRAKSLERRIR*
(restricted) Ga0172366_103901852	3300013128	Sediment	VVGDRLMGKLDERFRDCICLNIYDRIDSMRVLGESIMANRAKSLERRIR*
(restricted) Ga0172362_108050452	3300013133	Sediment	MVGDRLMSILDEHFRDCICLNIYDGIDSMRVLGESIMANRAKSLERRIR*
Ga0180437_100156983	3300017963	Hypersaline Lake Sediment	MGILDERFRNCICLNMYDRIESMRVLGELIMIKRAKSLERRIR
Ga0180437_100753213	3300017963	Hypersaline Lake Sediment	MSILDERFRNCICLSVYNRIESMQMLGELVMIERAKSLERRIR
Ga0180437_101770682	3300017963	Hypersaline Lake Sediment	VVGDRVMSILDEHFRNCICLNIYDRINSMQMLGELIMIKGAKSLERRIR
Ga0180438_100360612	3300017971	Hypersaline Lake Sediment	MGILDERFRNCICLNMYDRIESMRVLGELVMIKRAKSLERRIR
Ga0180438_100884924	3300017971	Hypersaline Lake Sediment	VDGDIPMSILDERFRNCICLSVYNRIESMQMLGELVMIERAKSLERRIR
Ga0180433_111049172	3300018080	Hypersaline Lake Sediment	MSILDEHFRNCICLNIYDRINSMQMLGELIMIKGAKSLERRIR
Ga0187774_100260872	3300018089	Tropical Peatland	MVGERLMSILDERFRDCICLNIYDRIDSMQMLELIMIKRAKSLERRIR
Ga0172288_10825352	3300019234	Wetland	MGILDERFRDGICLNIYDRIDSMQMLGELIMINRAKSLERRIR
Ga0172288_11878401	3300019234	Wetland	MGILDERFRECICLNIYDRIDSMQMLRELVMIKRVKSLERRIR
Ga0172288_14844782	3300019234	Wetland	MVGERLMSILDERFRDYICLNIYDRIDSMQMLGELIMIKRAKSLERRIR
Ga0172288_14873931	3300019234	Wetland	LELRFMVGDRLMRIADERFRDCICLNIYDRIDSMQMLGEFVMIKRAKSLERRIR
Ga0187791_12941302	3300019245	Peatland	MVADRLMSILDERFRDCICLNIYDRIDSMQMLELIMIKRAKSLERRIR
Ga0172287_11475941	3300019246	Wetland	MVGDRLMGISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR
Ga0172287_12090552	3300019246	Wetland	VVGDRLMGILDERFRECICLNIYDRIDSMQMLRELVMIKRVKSLERRIR
Ga0172287_12240231	3300019246	Wetland	VVGDRLMRISDERFRDCICLNIYDRIDSMQMLRELVMIKRAKSLERRIR
Ga0172287_13200532	3300019246	Wetland	MGILDERFRDGICLNIYDRIDSMQMLGELIMIKRAKSLERRIR
Ga0187790_10197992	3300019250	Peatland	MVGEKLMGILDERFRDCICLNIYDRTDSMRMLELITIKRARSLERRIR
Ga0187790_13958892	3300019250	Peatland	MRISDERFRNCVCLNIYNRIDCMRMLGELIIIRAKSLERRIR
Ga0172286_14408182	3300019252	Wetland	LEPRFVVGDRLMGILDERFRDGICLNIYDRIDSMQMLGELIMINRAKSLERRIR
Ga0172286_15013232	3300019252	Wetland	MVGERLMSILDERFRDYICLNIYDRIDSMQMLGELVMIKRAKSLERRIR
Ga0079039_14192482	3300022185	Freshwater Wetlands	MVGDRLMRISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERR
Ga0224495_100083005	3300022208	Sediment	MVGDRLMRISDERFRDCICLSIYGRIDSMQMLGELIMIKGAKSLERRIR
Ga0209986_101036822	3300024433	Deep Subsurface	MVGERLMRISDERFRNCVCLKMYNMIDCMRMLGELIMIKRTKSLERRIR
Ga0209102_10086423	3300025794	Hot Spring Microbial Mat	MRIQGKCFRNCVCLSIQKRTERMQRELIIISRAKSLERRIR
Ga0214474_10291843	3300027740	Soil	MGILDERFRDCICLNIYDRIDSMQMLGELIMIKRAKKLERRIR
Ga0209121_102237932	3300027742	Marine	MVGERLMSILDERFRKYVCLNIYERIDSMQMLGELIEIRAKSLERRIR
Ga0256868_103870051	3300027811	Soil	VVGDRLMRISDERFRDCICLNIYDRIDSMQMLGEFMMIKRAKSL
Ga0209742_102324092	3300027814	Marine Sediment	CRSDYGHTGLEPLVVDGDIPMSILDERFRNCICLSNYNRIESMQMLGELVMIERAKSLERRIR
Ga0209635_101352524	3300027888	Marine Sediment	MSILDERFRNCICLNIYDRICSMQMLGELIMIKMAKGLERRIS
Ga0209635_106390512	3300027888	Marine Sediment	MDGERPMRIPDKRFRNCVCLDIQKRIDCMQMLGELIIIKRAKSLERRIR
Ga0209635_109065532	3300027888	Marine Sediment	MGILDERFRKHICLNIYDRIESMQMLEELIMTRRAKSLERRIR
Ga0209636_105976463	3300027893	Marine Sediment	MVGDKLMGISDERFRNCVCLNIYDRIDSMLMLGELIMINGANSLERRIR
Ga0209636_112740412	3300027893	Marine Sediment	MVGGRLMGILDEHFRDCVCPNIYDRIDSMQVLGEIVMIKRAKSLERRIR
Ga0209253_102648062	3300027900	Freshwater Lake Sediment	VVGDRLMRISDERFRDCICLNIYDRIDSMQMLGEFMMIKRAKSLERRIR
Ga0209427_107278552	3300027901	Marine Sediment	MGISDERFRDFICLNIYDRIESMRVLGELIMIKRAKSLERRIR
Ga0209536_1000823283	3300027917	Marine Sediment	MSILDERFRDCICLNIYDRIDSMRMLGELVMIKRAKSLERRIR
Ga0134606_100197103	3300029827	Marine Sediment	VVGDKLMGILDERFRGCICLNIYDRIDSMRVLGELIMTNRAKSLERRIR
Ga0299915_104767712	3300030613	Soil	MRILDERFRDCICLNIYDRIESMQMLGELIMIKRAKKLERRIR
Ga0307925_1067722	3300030714	Soil	MRILDERFRDCICLNIYDRIDSMQMLGELVMIKRAKKLERRIR
Ga0307927_10273132	3300030717	Soil	VVGDRLMRILDERFRDCICLNIYDRIDSMQMLGELVMIKRAKKLERRIR
Ga0315554_10575653	3300031255	Salt Marsh Sediment	MVGDRLMGIIDERFRDCICLNIYDRIDSMQMLGELIMIKGAKSLERRIR
Ga0315555_12418981	3300031257	Salt Marsh Sediment	VGDRLMGILDEHFRNCICLNIYDRIDSMQMLEELIMIKGAKSLERRIR
Ga0307439_10208912	3300031356	Salt Marsh	MRILDKRFRDCICLNIYDRTDSMQMLGELIMIKGARSLERRIR
Ga0307438_10145722	3300031358	Salt Marsh	MGGERLMRISDERFRNCVCLKVYNMIDSMRMLGELIMIKRTKSLERRIR
Ga0315544_10014429	3300031554	Salt Marsh Sediment	VVGDRLMGILDEHFRNCICLNIYDRIDSMQMLEELIMIKGAKSLERRIR
Ga0315552_12300781	3300031620	Salt Marsh Sediment	MVGDRLMGILDERFRNCICLNRYDRIDSMQMLEELIMIKGAKSLERRIR
Ga0315537_10295144	3300031698	Salt Marsh Sediment	MVGDRLMGIIDERFRDCSCLNIYDRIDSMQMLGELIMIKGAKSLERRIR
Ga0315293_105946702	3300031746	Sediment	MRISDERFRDCICLNIYDRIDSMQMLGEFMMIKRTKSLERRIR
Ga0315288_100338192	3300031772	Sediment	MGILDERFRDCICLNIYDRIDSMQMLGEFMMIKRTKSLERRIR
Ga0315285_100080691	3300031885	Sediment	EPRFVVGDRLMRISDERFRDCICLNIYDRIDSMQMLGEFMMINRAKSLERRIR
Ga0315294_100163083	3300031952	Sediment	MRISDERFRDCICLNIYDRIDSMQMLGEFMMINRAKSLERRIR
Ga0315294_101285073	3300031952	Sediment	VVGDRLMGILDERFRDCICLNIYDRIDSMQMLGEFMMIKRTKSLERRIR
Ga0315296_100099785	3300032020	Sediment	MVGERLMRISDERFRNCVCLDIYDRIDSMRMLGELIIINRSKSLERRIR
Ga0315546_10038328	3300032029	Salt Marsh Sediment	MRIQDKCFRNCICLNIYDRTDSMRMLGELIMIKGARSLERRIR
Ga0315289_102106592	3300032046	Sediment	VVGDRLMRISDERFRDCICLNIYDRIDSMQMLGEFMMIKRTKSLERRIR
Ga0315289_105273722	3300032046	Sediment	HIELEPRFVVGDRLMRISDERFRDCICLNIYDRIDSMQMLGEFMMINRAKSLERRIR
Ga0315292_114277382	3300032143	Sediment	MRISDERFRDCICLNIYDRIDSMQMLGELMMIKRTKSLERRIR
Ga0315295_102756621	3300032156	Sediment	MGILDERFRDCVCLNIYDRIDSMQMLGELIMINRAKS
Ga0315295_110966582	3300032156	Sediment	VVGDRLMGILDERFRNCICLNIYDRIDSMQMLGKLIVINMAEGLERRIS
Ga0316593_100052394	3300032168	Rhizosphere	MGILDERFRNCICLNIYDRIESMQMLGELIMIRRAKSLERRIR
Ga0316593_100070604	3300032168	Rhizosphere	VAGDRLMSILDERFRDCICLNIYDRIDSMSMLEELVMIKRAKSLERRIR
Ga0316593_100181922	3300032168	Rhizosphere	VVGDRLMSILDERFRDCICLNIYDRIDSMRMLGELIMIKRAKSLERRIR
Ga0316593_100194193	3300032168	Rhizosphere	VAGDTVMSILDEHFRDCICLHIYDGINGMRMLGELVMIKRAKSLERRIR
Ga0316593_100288123	3300032168	Rhizosphere	MRILDERFRNCICLNIYDRIDSMQMLGELIMIKGANSLERRIR
Ga0316593_100475682	3300032168	Rhizosphere	VVRDRLMGILDECFRNCICLNMCDGIDSMRVLGELTMIKRAKSLERRIR
Ga0316593_100749193	3300032168	Rhizosphere	MGILDEHFRNCICLNICDGISSMRMLGELVMIKRAKSLERRIR
Ga0316593_100935633	3300032168	Rhizosphere	MSILDERFRNCICLNICDGIDSMRVLRELIMIKRAKSLERRIR
Ga0316593_101404812	3300032168	Rhizosphere	MVGDGLMSIFDERFRDCICLNIYDRIDSMQMLGELIMKKGAKSLERRIR
Ga0316593_101900312	3300032168	Rhizosphere	VSIFDERFRYCICLNIYDRIDSMQMLGELIMKKGAKSLERRIR
Ga0316593_103062911	3300032168	Rhizosphere	VVGDRLMGILDERFRNCICLSIYDRIDGMQMLGELVMIKRAKSLER
Ga0316593_103201841	3300032168	Rhizosphere	MRILDERFRNCICLNIYDRIDNMQMLGEVIMIKGANSLER
Ga0316593_103865911	3300032168	Rhizosphere	MRILDKRFRDCICQNIYDRIGIQMRGELIMIKGANSLER
Ga0316593_104524522	3300032168	Rhizosphere	RILDKRFRDCICRNIYDRIGIQMRGELIMIKGANSLERRIR
Ga0316622_1008122502	3300033416	Soil	MVGDRLMGISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSFERRIR
Ga0316620_100165961	3300033480	Soil	FRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR
Ga0316620_101156781	3300033480	Soil	MVGDRLMRISDERFRDCICLNIYDRIDSMQMLRELVMIKRAK
Ga0316628_1001043185	3300033513	Soil	MVGDRLMRISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR
Ga0316592_10442642	3300033524	Rhizosphere	VDGDIPMSILDERFRNCICLNMYDRIESMQMLGELIMIKRAKSLERRIR
Ga0316592_10718362	3300033524	Rhizosphere	LMGILDERFRDCICLSIYDRIESMQMLGELTMTKRAKSLERRIR
Ga0316588_10570282	3300033528	Rhizosphere	VVGDRLMGILDEHFRNCICLSNYNRIESMQMLGELIMIERAKSLERRIR
Ga0316588_11320481	3300033528	Rhizosphere	MRILDERFRNCICLNIYDRIDNMQMLGEVIMIKGANSLERRIR
Ga0316588_11420982	3300033528	Rhizosphere	VVGDRLMGILDERFRNCICLNIYDRIDSMQMLGELTMIKRAKSLERRIR
Ga0316587_10199602	3300033529	Rhizosphere	VVGDKLMGILDERFRDCICLNIYDRIDSMSMLEELVMIKRAKSLERRIR
Ga0316587_10558272	3300033529	Rhizosphere	VVGDKLMGILDERFRGCICLNIYDRVDSMRVLGELIMTNRAKSLERRIR
Ga0316596_10149593	3300033541	Rhizosphere	MVGDRLMGILDERFRDCICLNIYDRIESMQMLGELTMTKRAKSLERRIR
Ga0316596_11894011	3300033541	Rhizosphere	MMGILDERFRNCICLSIYNRIESMQMLGELVMIKRAKSLERRI
Ga0334965_0275285_55_204	3300033991	Sediment	MVGDRLMGILDERFRNCICLNIYDRIESMRVLGELVTIKRAKSLERRIR
Ga0373901_083391_420_566	3300034083	Sediment Slurry	MVGERLMGILDERFRACICLNIYDRIDSMQMLELTTIKRAKSLERRIR
Ga0373913_0081424_6_137	3300034089	Sediment Slurry	MGILDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR
Ga0373913_0108542_10_141	3300034089	Sediment Slurry	MGISDERFRDCICLNIYDRIDSMQMLGELVMIKRAKSLERRIR
Ga0373909_0103133_596_745	3300034191	Sediment Slurry	MVGDRLMGISDERFRDCICLNIYDRIDSMRMLGELVMIKRAKSLERRIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters