Sample 3300025563

3300025563: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2 (SPAdes)

Overview

Basic Information
IMG/M Taxon OID	3300025563 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101349 \| Ga0210112
Sample Name	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	215514192
Sequencing Scaffolds	52
Novel Protein Genes	55
Associated Families	44

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	6
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3
Not Available	21
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Lentimicrobiaceae → Lentimicrobium → Lentimicrobium saccharophilum	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Aneurinibacillus group → Aneurinibacillus → Aneurinibacillus tyrosinisolvens	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.197227	Long. (^o)	-122.010124	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001823	Metagenome / Metatranscriptome	630	Y
F005815	Metagenome / Metatranscriptome	389	Y
F007437	Metagenome / Metatranscriptome	351	Y
F010065	Metagenome	309	Y
F015265	Metagenome / Metatranscriptome	256	Y
F015573	Metagenome	253	Y
F018023	Metagenome / Metatranscriptome	237	Y
F018371	Metagenome / Metatranscriptome	235	Y
F021446	Metagenome / Metatranscriptome	219	Y
F022119	Metagenome / Metatranscriptome	216	Y
F026037	Metagenome / Metatranscriptome	199	Y
F026198	Metagenome	198	Y
F029006	Metagenome	189	Y
F030367	Metagenome / Metatranscriptome	185	Y
F030405	Metagenome / Metatranscriptome	185	Y
F034003	Metagenome	176	Y
F043480	Metagenome / Metatranscriptome	156	Y
F055311	Metagenome / Metatranscriptome	139	Y
F055469	Metagenome / Metatranscriptome	138	Y
F057478	Metagenome	136	Y
F058081	Metagenome	135	Y
F059476	Metagenome / Metatranscriptome	134	Y
F059979	Metagenome / Metatranscriptome	133	Y
F060712	Metagenome / Metatranscriptome	132	Y
F063813	Metagenome / Metatranscriptome	129	N
F064351	Metagenome	128	Y
F066901	Metagenome	126	Y
F067249	Metagenome	126	Y
F071910	Metagenome	121	Y
F073771	Metagenome / Metatranscriptome	120	Y
F077987	Metagenome / Metatranscriptome	117	Y
F078289	Metagenome / Metatranscriptome	116	N
F078730	Metagenome / Metatranscriptome	116	Y
F082105	Metagenome / Metatranscriptome	113	Y
F086605	Metagenome	110	Y
F087385	Metagenome	110	Y
F088316	Metagenome / Metatranscriptome	109	N
F089490	Metagenome / Metatranscriptome	109	Y
F094068	Metagenome / Metatranscriptome	106	Y
F100441	Metagenome	102	Y
F102138	Metagenome	102	Y
F103282	Metagenome	101	Y
F105195	Metagenome	100	Y
F105451	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210112_1000216	All Organisms → cellular organisms → Bacteria	16419	Open in IMG/M
Ga0210112_1001275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6436	Open in IMG/M
Ga0210112_1001403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6079	Open in IMG/M
Ga0210112_1003041	Not Available	3957	Open in IMG/M
Ga0210112_1003306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3782	Open in IMG/M
Ga0210112_1004221	All Organisms → cellular organisms → Bacteria	3303	Open in IMG/M
Ga0210112_1006371	All Organisms → cellular organisms → Bacteria → Proteobacteria	2644	Open in IMG/M
Ga0210112_1006893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2542	Open in IMG/M
Ga0210112_1009947	All Organisms → cellular organisms → Bacteria → Proteobacteria	2105	Open in IMG/M
Ga0210112_1010255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2071	Open in IMG/M
Ga0210112_1011190	Not Available	1985	Open in IMG/M
Ga0210112_1011421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1964	Open in IMG/M
Ga0210112_1011676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1943	Open in IMG/M
Ga0210112_1011745	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
Ga0210112_1012282	Not Available	1895	Open in IMG/M
Ga0210112_1012852	All Organisms → cellular organisms → Bacteria → Proteobacteria	1849	Open in IMG/M
Ga0210112_1013423	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
Ga0210112_1014068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1764	Open in IMG/M
Ga0210112_1014624	Not Available	1729	Open in IMG/M
Ga0210112_1015381	Not Available	1685	Open in IMG/M
Ga0210112_1020446	Not Available	1446	Open in IMG/M
Ga0210112_1021243	Not Available	1417	Open in IMG/M
Ga0210112_1022564	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
Ga0210112_1022759	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
Ga0210112_1034435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus	1081	Open in IMG/M
Ga0210112_1034655	Not Available	1078	Open in IMG/M
Ga0210112_1048555	Not Available	893	Open in IMG/M
Ga0210112_1052974	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
Ga0210112_1055038	Not Available	832	Open in IMG/M
Ga0210112_1055439	Not Available	828	Open in IMG/M
Ga0210112_1065969	Not Available	752	Open in IMG/M
Ga0210112_1069070	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	733	Open in IMG/M
Ga0210112_1069256	Not Available	731	Open in IMG/M
Ga0210112_1072301	Not Available	714	Open in IMG/M
Ga0210112_1075918	Not Available	695	Open in IMG/M
Ga0210112_1084370	Not Available	655	Open in IMG/M
Ga0210112_1085858	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	648	Open in IMG/M
Ga0210112_1088151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	639	Open in IMG/M
Ga0210112_1093821	Not Available	617	Open in IMG/M
Ga0210112_1096262	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Lentimicrobiaceae → Lentimicrobium → Lentimicrobium saccharophilum	609	Open in IMG/M
Ga0210112_1098693	Not Available	601	Open in IMG/M
Ga0210112_1099455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	598	Open in IMG/M
Ga0210112_1105463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Aneurinibacillus group → Aneurinibacillus → Aneurinibacillus tyrosinisolvens	578	Open in IMG/M
Ga0210112_1107330	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	573	Open in IMG/M
Ga0210112_1111642	Not Available	560	Open in IMG/M
Ga0210112_1115117	Not Available	550	Open in IMG/M
Ga0210112_1115241	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
Ga0210112_1118308	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	541	Open in IMG/M
Ga0210112_1121990	Not Available	532	Open in IMG/M
Ga0210112_1125500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	523	Open in IMG/M
Ga0210112_1126479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	521	Open in IMG/M
Ga0210112_1132259	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	507	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0210112_1000216	Ga0210112_10002165	F059979	MKSFFVVLAQLMLVTIVYAFAYRAGYRDAKSKAMSVVRKFADPVTCLLDQLNESLEEAKEFEDEHPTSNIERSTSNEKNNVEP
Ga0210112_1001275	Ga0210112_10012752	F010065	MRGESGISLTGLYVCGAITLVMLVLKLSVIDTWSWWRVMLPLGLIVGFNVTNMVVAFIYLSFAHIPERPDGDEAEVLEPHTVNAHYVAAMLFFVVFGDNLVRWIEGSETSYWFWLFSGKIESLAVFGALSVVALFSYWSRLGRVLKASD
Ga0210112_1001403	Ga0210112_10014032	F059476	MAQQGNTQQSTRMIVTVVVLVLVALGFFAASFFALTK
Ga0210112_1003041	Ga0210112_10030411	F029006	MNKMIIALMAIYFIGDPGLQYLAWLGELKVYIVAAAIALVSMPWIASQLDG
Ga0210112_1003306	Ga0210112_10033063	F078289	MRKAVMILILSFIVIPLYGFNSLVRHEDISKMRELGISPEVIQYFITHQTSSLSSEDVIQMKQSGLNNDGIMSAIQSDLYRPEQKSTSMKEAELIAKLKAAGMSDEAVLQFIQTVKSTRRIESDGTISRHYADESQRTPYPTAGATFPKPENYEYDPTNGRYYFFVKPQNTP
Ga0210112_1004221	Ga0210112_10042214	F105195	MTVSLIWSLMDTQPPRLITSDKRVIDLSETDPAIWASYLSEENKPRVLAAVRRWETAITAGANAIESHGYAVSGIGVDFQTWLANERESCSS
Ga0210112_1006371	Ga0210112_10063715	F078730	MQEMEVHVNGPDGANRLYIYSGMAEVEIRGGLPHPRWTLEVICFELGRTYNLPDESIIKINASAALAGGRMDGVASFAGWKIFGAAGELDNESSRVRMNIAAGA
Ga0210112_1006893	Ga0210112_10068935	F105451	VRERLLLGLGLVGAAMVFSAIAVGRSGSKSIPCPICRRIDYLALVDPIGTHLCKAVLWNCQCGNTRAVLINRYTPRVLIEKALARDAVSDQP
Ga0210112_1006893	Ga0210112_10068936	F026037	ARGMEEKDKVLQLLNAEMKVERQLERLEDVQTLTEIIRYYRQKRARSSEIALAIVKFVKE
Ga0210112_1009947	Ga0210112_10099473	F021446	MKTLSIVLMATFMLVLAATSTGQAQSAEDGYNDPNPGGKYVYRGCNLTQVIFIQGDKLSEINELTLIIEVQGGQNSHTLRLTFPILAKRQEVNKLILDYQWPLGGDTYEATIIGDTLTNRKTKGYLAGIREEVFTRE
Ga0210112_1010255	Ga0210112_10102553	F094068	LGMALLLAASIALSVPPEVGAGAPCCSVTSVDKKTGVVKAKDADTGKTFEIRLHDATQTGNIKTGDRVSTDFETRQVTIHSFQPVEGILIKKPMPPPPKK
Ga0210112_1011190	Ga0210112_10111904	F103282	VAKVALVLTGIYLCGAIALVMLVLKLSVIDTWSWWQVMLPLGVFVAFNVINIVVAFINLSFAHISGRPNGGRS
Ga0210112_1011421	Ga0210112_10114212	F063813	MSLVQWSQAHGQKLKPTELESNAQSLAKPSPSSKKPSHQFDSRTGSAPIDETKTIERGLS
Ga0210112_1011676	Ga0210112_10116762	F089490	MTDGSDRASHSSDKKLSMYRLMKSEKFTLDYLTSGLVSFYRQRQIKCFGRLRAALGACEVANNSGRSRYYLLNELGQEYYGGTWID
Ga0210112_1011745	Ga0210112_10117452	F064351	MMMTLWPNQSAAANGLSAVRSSVAGIRERTVRSAAAEAVAELGRYAQNG
Ga0210112_1012282	Ga0210112_10122821	F029006	TIYFLGDPQLHYLAWLGDMKLYIVAAAIALVSMPWIAEQLDG
Ga0210112_1012852	Ga0210112_10128523	F018371	MQEMEVHVNGPEGANRLYIYSGMAEVEIRGGLPHPRWTLEVICFELGRTYNLSDESIIKINASAALAGGRMDGVASFAGWKIFGAAGELDNESSRVRMNIAAGARDTQAFLEQISFQVNVLARVKE
Ga0210112_1013423	Ga0210112_10134233	F087385	MGRGGGDLLSHAIARAVPSALRSLTTVFGMGTGVTSSL
Ga0210112_1014068	Ga0210112_10140681	F018371	MQEMEVHVNGPEGANRLFMHSGMAEVEIRGGLPHPRWTLEVVCFELGRTYDLSEESIIKINASAALAGGRMDGVASFAGWQVFGAAGELDNESRRVRMNIAAGARDTQAFLEQISFQINVLARVKE
Ga0210112_1014624	Ga0210112_10146242	F018023	PAERLPYRPLEGSRVEAFFDAQAGIRSGPDPPPGLLEAGCLRRAWTRFQTRVSTLKEAFGLLIPSVISGAAHLWKRMRLAKKTLAAILRFLAQSRNISLLGDYRCLRLPSPAAD
Ga0210112_1015381	Ga0210112_10153814	F029006	VKEATMNKIIIGLMAIYFLGDPDLHYLSWLGDLKLYVVAAAIALVSMPWIAEQLDG
Ga0210112_1020446	Ga0210112_10204461	F057478	MQALRSLIYTTLFFLVTGFFGVVVLISALLPLSIQQRYVIPRTWGLFLTWLAGAVCGL
Ga0210112_1021243	Ga0210112_10212432	F029006	MNKVIIALMAIYFIGDPGLQYLAWLGELKIYIVAAAIALVSMPWVAAQLDG
Ga0210112_1022564	Ga0210112_10225641	F086605	MMVDSWIHGTADPVPAVVGGYICPIAAVFTDGECGAAESV
Ga0210112_1022759	Ga0210112_10227592	F029006	MNKVIIALMAIYFLGDPGLQYLAWLGELKLYIVAAAIALVSMPWIASQLDG
Ga0210112_1033623	Ga0210112_10336232	F102138	WFDFIPRYDAISDEDNDVLVLQEKVRDLTIRQQLRTLPEIRKYFGEYLSDKLYGLDYKVTILNDERNKIIVFTHDSFTKRSELEKFHITVTNDLRALGFKQIRYKWYELEKLKEEKYIHYNFKDLPDNEPRRFNLSVLKNK
Ga0210112_1034435	Ga0210112_10344351	F005815	MTMKVTRLTTYWTLDEAATVIDFLDTLRDALWETYGEQITTMHREAYDDHIRDTNQRELEFDDDIPF
Ga0210112_1034655	Ga0210112_10346552	F015573	MSEELLTRIAQELTELRKQVQKVTYAMHEAESEVPEKMRRFIMYLHDMHDVKNMYVEHGLEVPKYILRELERCDDRLRQLLDTLHTDGGAFEKIRREMSADVNNRYDHTRLLGGSK
Ga0210112_1048555	Ga0210112_10485551	F073771	MNKSIAVVLLLVLAAGCSSTPRDEIYAPPMDEARKVSEQDCTGVIADD
Ga0210112_1052974	Ga0210112_10529742	F058081	MARATPQFTNRRRPRRNTAPLWKKLAVLLSAPLAVMIVVSLLNALQWSFLPLAILVVAVAIVALWGSSKLLGVHLSLGSWD
Ga0210112_1055038	Ga0210112_10550381	F100441	LHHVVPPYTDGPSVPFTSIEGQVRWVGPPSQYVESSSDATPFYASSLQCTPHYQDWSTVGLLHVTGSAIVPSSIYDVENVAASCMGAEAGCTAVSEPLEVATTRWGDVEQPYNPPNPTAQPDVGDISALVNKFRSAAGAPIKARALLAGDDAFGNINLSPDLSFNHISACVDAFRGKPYPYTIQSCP
Ga0210112_1055439	Ga0210112_10554392	F029006	MSMNKVIIALMAIYFLGDPGLQYLSWLGDMKLYIVAAAIALVSMPWVASQLDG
Ga0210112_1065969	Ga0210112_10659692	F071910	MRRIVIAALVVALLGTFALSLGLSAADAVERAVERHAVGVERALSL
Ga0210112_1069070	Ga0210112_10690701	F100441	PTQYVESSATGTPFYSSSLQCDPYYQDWSTVGLLHVTGSAIAPSSIYTVENVAASCQGVEAGCTAVSAPLEVTTTRWGDVETPYNPPSATAQPDVGDISALVNKFRNAAGAPIKARSLMAGSDGFGNINVSADLSFSHISVCVDSFRGQPYPYTISVCP
Ga0210112_1069256	Ga0210112_10692562	F055469	MLKRTVVILAAAAFFWGTVPTQTAQAGDDMWDLMDPSWWADKMFDDDHDDWLYYRHHRYSPYWGAAYGQRPRVVVVLQQPETKAQNPETRPPE
Ga0210112_1072301	Ga0210112_10723011	F030367	MTTKTLQALLITALLASSVAFADQSIEVSVVNGKRQASFNVGDLQCVLVNDVIRGTPVVLASN
Ga0210112_1075918	Ga0210112_10759182	F001823	MRAFDRDLIRGGHYGQRPCVPHLKAEHMAAPTNAANVKKALANSEPSTHGTK
Ga0210112_1084370	Ga0210112_10843702	F066901	MKHPCEAQVAWEICKLISELDAFLWDLFWDEFEAIYEREEAEKYWGSTIH
Ga0210112_1085858	Ga0210112_10858581	F022119	MDGVILKCPACGQILERIEGVCGEYICINPECLENKKADVQAHAEFYGLTQADINANYRIALAKK
Ga0210112_1088151	Ga0210112_10881512	F088316	MTLYRVREGYVVHLGNRQTLSPGTIFEPDRKVLESQGWKVEPVPEEPKPVTRDVEAPPQDRMIKKPPVKK
Ga0210112_1093821	Ga0210112_10938211	F029006	KLIIVLMAIYFIGDPGLQYLAWLGELKVYIVAAAIALVSMPWIASQLDG
Ga0210112_1094832	Ga0210112_10948321	F060712	MTTKADIVNRALQVPGTRTTVTDAELVANSTNEAIQANLIYDNIRKRLLRMAPWNCGLKTANLVYISSVPGTPENTSAATNLWERGQPTPPWAYEYQYPNDCLDACWIIPATQTGFAGGVPITTAVTGGAPSFWNGPPVKFNVMTDIFRPVTAAAIVFGG
Ga0210112_1096262	Ga0210112_10962622	F030405	MQGYDVVLFILALAKTVTPGGGPRREPGQAAPLSTYG
Ga0210112_1098693	Ga0210112_10986931	F100441	PYYQDWSTVGLLHVTGSAITPSSVYAVENVAASCQGNEANCTAVSAPLTVGTTRWGDVELPYNPPSATAQPDLGDIAALVNKFRSASGAPIKARALLAGDDAFGNINLSPDLGFNHISACVDAFRGKPYPFTIAACP
Ga0210112_1099455	Ga0210112_10994551	F082105	AVTSIALTTALIWRDPPRCTEQPNVTVQRAVAGTVMRIDSAGSGRVNEKK
Ga0210112_1105463	Ga0210112_11054631	F077987	MRIEYKCSGGYGGLRFAYRGETDELPSEQAKEISDLVEASGIFELTPKQLSKKSPKIPDDFSCQLTVFKAGKRKTLSFNELGAPENLRLLSVHLRKLAIKVK
Ga0210112_1107330	Ga0210112_11073302	F067249	MNPKIVLQGSKIKNALLLLKKDVDPNQENYTFNDVRMIMEIKNNSVGGKILENGKREDPNKVLRFRFNELEAKTKVRNFGVIVLSETLLPPKTPYKYRFKENAIGKENCKVFTLVARELYPRGGLYIKSNLTE
Ga0210112_1111642	Ga0210112_11116422	F043480	MNKILFTVGLCIALAAAALLFLNIIESGVAALIGILGIGLIGASGIDRKSSGGE
Ga0210112_1115117	Ga0210112_11151171	F015265	MTKSSTMYPAHITKKPKLIEKNAIVNLNNVGLPVFLNPINAIIPMASPTKNPIRFNIFSNKNSNDA
Ga0210112_1115241	Ga0210112_11152412	F034003	MKKRRKRNPALKKTNQLSFDFNLNDPIEIHTPKSNISDLRKELAWEHRPIIEIVKS
Ga0210112_1118308	Ga0210112_11183081	F026198	LGGGETLTVEIATLVSGVLIMVGLIIGGGAIYAGLEKLAGALKKQK
Ga0210112_1121990	Ga0210112_11219901	F029006	MNKVIIALMAIYFIGDPGLQYLSWLGELKIYTVAAAIALVSMPWIASQLDG
Ga0210112_1125500	Ga0210112_11255001	F007437	MGSSNSRLDLYDPKTLEALGQAFDSSWVMLQARNPFRDFERDLDLKSTLSLKLTALAADGVTDPVELREWALESLPLR
Ga0210112_1126479	Ga0210112_11264791	F055311	MAEDILDYWTRLIKTVFPENAWITSHFFKNDCLINIDWKVKNDPENPNKRSKRIEIIIKGDTLETYLNKNKKDRELSDIMLKEFISEQYNNFSSDYDISTSQYVPKEKWLISRNVLNCKPSFDTHLSDQVKSVYQ
Ga0210112_1132259	Ga0210112_11322591	F067249	TDMLLLKNGVDPNQKNYPSDQVKMVIEIKNNGVGGKTIENGKREDPNKVLRVKFNELEGITNVKNFAVIVLSETLLPPRTPYKWRFKEEVIGKENCKVFTLVARQLYPPGGLYIKSSIVEMLQKGQMKKTGEFQQMVHYLKCL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025563: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences