Metagenome / Metatranscriptome Family F043480

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043480
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	51 residues
Representative Sequence	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIGASGRL
Number of Associated Samples	83
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	81.33 %
% of genes near scaffold ends (potentially truncated)	17.31 %
% of genes from short scaffolds (< 2000 bps)	68.59 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (54.487 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (16.026 % of family members)
Environment Ontology (ENVO)	Unclassified (37.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (43.590 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.00% β-sheet: 0.00% Coil/Unstructured: 48.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.16.1: IVS-encoded protein-like	d2rlda1	2rld	0.79905
a.2.17.1: VPS23 C-terminal domain	d2f6ma2	2f6m	0.79425
a.266.1.2: Indoleamine 2,3-dioxygenase-like	d2nwba1	2nwb	0.79212
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d2cj4a_	2cj4	0.77682
a.127.1.1: L-aspartase/fumarase	d7miwa1	7miw	0.77475

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF08818	DUF1801	3.23
PF02943	FeThRed_B	2.58
PF00440	TetR_N	1.94
PF13414	TPR_11	1.94
PF09932	DUF2164	1.94
PF03724	META	1.29
PF07784	DUF1622	1.29
PF00301	Rubredoxin	1.29
PF04191	PEMT	1.29
PF02086	MethyltransfD12	1.29
PF16916	ZT_dimer	1.29
PF07998	Peptidase_M54	1.29
PF13391	HNH_2	1.29
PF00016	RuBisCO_large	1.29
PF03008	DUF234	1.29
PF05649	Peptidase_M13_N	1.29
PF01964	ThiC_Rad_SAM	0.65
PF00072	Response_reg	0.65
PF09888	DUF2115	0.65
PF04993	TfoX_N	0.65
PF11972	HTH_13	0.65
PF00682	HMGL-like	0.65
PF04055	Radical_SAM	0.65
PF12680	SnoaL_2	0.65
PF14076	DUF4258	0.65
PF12399	BCA_ABC_TP_C	0.65
PF01954	AF2212-like	0.65
PF04885	Stig1	0.65
PF00696	AA_kinase	0.65
PF04167	DUF402	0.65
PF14367	DUF4411	0.65
PF00174	Oxidored_molyb	0.65
PF13646	HEAT_2	0.65
PF04024	PspC	0.65
PF13507	GATase_5	0.65
PF08502	LeuA_dimer	0.65
PF00801	PKD	0.65
PF16795	Phage_integr_3	0.65
PF05013	FGase	0.65
PF16264	SatD	0.65
PF01814	Hemerythrin	0.65
PF13187	Fer4_9	0.65
PF13181	TPR_8	0.65
PF13371	TPR_9	0.65
PF14401	RLAN	0.65
PF12762	DDE_Tnp_IS1595	0.65
PF04893	Yip1	0.65
PF01176	eIF-1a	0.65
PF13649	Methyltransf_25	0.65
PF08734	GYD	0.65
PF01391	Collagen	0.65
PF10604	Polyketide_cyc2	0.65
PF13540	RCC1_2	0.65
PF02653	BPD_transp_2	0.65
PF09897	DUF2124	0.65
PF13328	HD_4	0.65
PF00515	TPR_1	0.65
PF00141	peroxidase	0.65
PF00561	Abhydrolase_1	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	3.23
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	3.23
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	3.23
COG4802	Ferredoxin-thioredoxin reductase, catalytic subunit	Energy production and conversion [C]	2.58
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	1.29
COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	General function prediction only [R]	1.29
COG1850	Ribulose 1,5-bisphosphate carboxylase, large subunit, or a RuBisCO-like protein	Carbohydrate transport and metabolism [G]	1.29
COG1913	Predicted Zn-dependent protease	General function prediction only [R]	1.29
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	1.29
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	1.29
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	1.29
COG4828	Uncharacterized membrane protein	Function unknown [S]	1.29
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.65
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.65
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.65
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	0.65
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.65
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.65
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.65
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.65
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.65
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.46 %
Unclassified	root	N/A	36.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.46 %
Unclassified	root	N/A	36.54 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	54.49 %
Unclassified	root	N/A	36.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.97 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	48.08 %
Unclassified	root	N/A	36.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.28 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	25.64 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	17.31 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.28 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.28 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.64 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	25.64 %
Euryarchaeota archaeon ADurb.BinA087	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	17.31 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.28 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.64 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	0.64 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	22.44 %
Euryarchaeota archaeon ADurb.BinA087	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	17.31 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1.28 %
Chloroflexi bacterium RBG_19FT_COMBO_47_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_47_9	0.64 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.64 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Euryarchaeota archaeon ADurb.BinA087	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	17.31 %
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	6.41 %
Methanomicrobiaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	4.49 %
Marinilabiliales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales	1.28 %
Nitrosarchaeum	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	0.64 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	0.64 %
Chloroflexi bacterium RBG_19FT_COMBO_47_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_47_9	0.64 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Euryarchaeota archaeon ADurb.BinA087	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	17.31 %
Methanoregula	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	4.49 %
Methanolinea	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea	1.92 %
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	1.92 %
Prolixibacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae	1.28 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	0.64 %
Methanomicrobium	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanomicrobium	0.64 %
unclassified Nitrosarchaeum	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum	0.64 %
Methanoplanus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoplanus	0.64 %
Chloroflexi bacterium RBG_19FT_COMBO_47_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_47_9	0.64 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Euryarchaeota archaeon ADurb.BinA087	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	17.31 %
Methanoregula boonei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1.28 %
unclassified Methanolinea	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → unclassified Methanolinea	1.28 %
Prolixibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Prolixibacter	1.28 %
Methanoregula formicica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	1.28 %
Nitrosarchaeum sp. AC2	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum → Nitrosarchaeum sp. AC2	0.64 %
Methanoculleus marisnigri	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus marisnigri	0.64 %
Methanolinea tarda	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → Methanolinea tarda	0.64 %
unclassified Methanomicrobium	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanomicrobium → unclassified Methanomicrobium	0.64 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	0.64 %
Methanoplanus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoplanus	0.64 %
Chloroflexi bacterium RBG_19FT_COMBO_47_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_47_9	0.64 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.54 %
Euryarchaeota archaeon ADurb.BinA087	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	17.31 %
Methanolinea sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → unclassified Methanolinea → Methanolinea sp.	1.28 %
Prolixibacter bellariivorans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Prolixibacter → Prolixibacter bellariivorans	1.28 %
Methanoregula boonei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1.28 %
Methanoregula formicica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	1.28 %
Methanomicrobium sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanomicrobium → unclassified Methanomicrobium → Methanomicrobium sp.	0.64 %
Nitrosarchaeum sp. AC2	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum → Nitrosarchaeum sp. AC2	0.64 %
Methanoculleus marisnigri	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus marisnigri	0.64 %
Methanolinea tarda	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → Methanolinea tarda	0.64 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	0.64 %
Methanoplanus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoplanus	0.64 %
Chloroflexi bacterium RBG_19FT_COMBO_47_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_47_9	0.64 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876020\|2244392223	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1603	Open in IMG/M
3300000032\|Draft_c0006280	Not Available	13390	Open in IMG/M
3300000032\|Draft_c0069272	All Organisms → cellular organisms → Archaea	7966	Open in IMG/M
3300000032\|Draft_c0126071	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	4424	Open in IMG/M
3300000568\|Draft_10030993	Not Available	1674	Open in IMG/M
3300001213\|JGIcombinedJ13530_100865063	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	700	Open in IMG/M
3300001213\|JGIcombinedJ13530_107943525	Not Available	702	Open in IMG/M
3300001567\|Draft_10000138	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	136502	Open in IMG/M
3300001567\|Draft_10023291	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2943	Open in IMG/M
3300001580\|Draft_10011688	Not Available	7367	Open in IMG/M
3300001580\|Draft_10053202	All Organisms → cellular organisms → Archaea	2545	Open in IMG/M
3300002219\|SCADCLC_10078487	Not Available	9328	Open in IMG/M
3300002703\|draft_11039077	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1667	Open in IMG/M
3300002703\|draft_11076164	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	4411	Open in IMG/M
3300003432\|JGI20214J51088_10095430	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2092	Open in IMG/M
3300003541\|JGI20214J51650_10147575	Not Available	1613	Open in IMG/M
3300003858\|Ga0031656_10028671	Not Available	2303	Open in IMG/M
3300003859\|Ga0031653_10029118	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300004012\|Ga0055464_10209936	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Prolixibacter → Prolixibacter bellariivorans	581	Open in IMG/M
3300004063\|Ga0055483_10142669	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus marisnigri	761	Open in IMG/M
3300004063\|Ga0055483_10220408	All Organisms → cellular organisms → Archaea	619	Open in IMG/M
3300004481\|Ga0069718_10158253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Prolixibacter → Prolixibacter bellariivorans	673	Open in IMG/M
3300004481\|Ga0069718_11175978	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	518	Open in IMG/M
3300005144\|Ga0068711_1005807	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	4971	Open in IMG/M
3300005144\|Ga0068711_1016954	All Organisms → cellular organisms → Archaea	2163	Open in IMG/M
3300005144\|Ga0068711_1036310	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → Methanolinea tarda	1204	Open in IMG/M
3300005144\|Ga0068711_1036396	Not Available	1202	Open in IMG/M
3300005144\|Ga0068711_1039090	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300005144\|Ga0068711_1051529	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	934	Open in IMG/M
3300005144\|Ga0068711_1064619	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005832\|Ga0074469_10394833	Not Available	546	Open in IMG/M
3300006224\|Ga0079037_100051372	Not Available	3226	Open in IMG/M
3300006224\|Ga0079037_102457907	Not Available	520	Open in IMG/M
3300006885\|Ga0102512_100002	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	412343	Open in IMG/M
3300006930\|Ga0079303_10112346	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1038	Open in IMG/M
3300006930\|Ga0079303_10435094	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	560	Open in IMG/M
3300009091\|Ga0102851_10388207	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1400	Open in IMG/M
3300009091\|Ga0102851_10412259	Not Available	1363	Open in IMG/M
3300009091\|Ga0102851_10452905	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1307	Open in IMG/M
3300009091\|Ga0102851_10972743	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	921	Open in IMG/M
3300009091\|Ga0102851_11118826	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	863	Open in IMG/M
3300009091\|Ga0102851_12588815	Not Available	581	Open in IMG/M
3300009091\|Ga0102851_13198687	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	526	Open in IMG/M
3300009111\|Ga0115026_10143361	Not Available	1528	Open in IMG/M
3300009111\|Ga0115026_10156358	Not Available	1476	Open in IMG/M
3300009111\|Ga0115026_10255825	Not Available	1202	Open in IMG/M
3300009131\|Ga0115027_10986597	Not Available	658	Open in IMG/M
3300009167\|Ga0113563_12467872	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanomicrobium → unclassified Methanomicrobium → Methanomicrobium sp.	627	Open in IMG/M
3300009179\|Ga0115028_10336353	Not Available	1032	Open in IMG/M
3300009179\|Ga0115028_11392105	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	589	Open in IMG/M
3300009388\|Ga0103809_1000012	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	130458	Open in IMG/M
3300009666\|Ga0116182_1034942	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	3042	Open in IMG/M
3300009666\|Ga0116182_1054018	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	2248	Open in IMG/M
3300009674\|Ga0116173_1061072	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2055	Open in IMG/M
3300009674\|Ga0116173_1437944	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoplanus	560	Open in IMG/M
3300009681\|Ga0116174_10366543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_47_9	677	Open in IMG/M
3300009687\|Ga0116144_10037725	Not Available	3067	Open in IMG/M
3300009689\|Ga0116186_1141095	All Organisms → cellular organisms → Archaea → Euryarchaeota	1135	Open in IMG/M
3300009693\|Ga0116141_10321028	All Organisms → cellular organisms → Archaea → Euryarchaeota	813	Open in IMG/M
3300009781\|Ga0116178_10010105	All Organisms → cellular organisms → Archaea → Euryarchaeota	6309	Open in IMG/M
3300009782\|Ga0116157_10049545	Not Available	2767	Open in IMG/M
3300009782\|Ga0116157_10592379	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	559	Open in IMG/M
3300010353\|Ga0116236_10074707	All Organisms → cellular organisms → Archaea → Euryarchaeota	3415	Open in IMG/M
3300012018\|Ga0119867_1183622	Not Available	555	Open in IMG/M
3300012931\|Ga0153915_10013644	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	7841	Open in IMG/M
3300012931\|Ga0153915_10085994	All Organisms → cellular organisms → Archaea → Euryarchaeota	3307	Open in IMG/M
3300012931\|Ga0153915_10325353	Not Available	1723	Open in IMG/M
3300012931\|Ga0153915_10537771	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1339	Open in IMG/M
3300012931\|Ga0153915_10703430	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1167	Open in IMG/M
3300012931\|Ga0153915_10725369	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum → Nitrosarchaeum sp. AC2	1149	Open in IMG/M
3300012931\|Ga0153915_10801967	Not Available	1091	Open in IMG/M
3300012931\|Ga0153915_11120162	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	918	Open in IMG/M
3300012931\|Ga0153915_11660844	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	747	Open in IMG/M
3300012931\|Ga0153915_12075964	Not Available	665	Open in IMG/M
3300012931\|Ga0153915_12128050	Not Available	657	Open in IMG/M
3300012964\|Ga0153916_10296080	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1652	Open in IMG/M
3300012964\|Ga0153916_10599509	Not Available	1178	Open in IMG/M
3300012964\|Ga0153916_10783478	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1033	Open in IMG/M
3300012964\|Ga0153916_12298600	Not Available	606	Open in IMG/M
3300012964\|Ga0153916_13238449	Not Available	512	Open in IMG/M
3300013086\|Ga0163202_1004854	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2526	Open in IMG/M
3300014205\|Ga0172380_10021879	All Organisms → cellular organisms → Bacteria	5937	Open in IMG/M
3300025563\|Ga0210112_1111642	Not Available	560	Open in IMG/M
3300025708\|Ga0209201_1000061	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	166217	Open in IMG/M
3300025720\|Ga0208197_1049550	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1723	Open in IMG/M
3300025748\|Ga0208459_1030446	All Organisms → cellular organisms → Archaea → Euryarchaeota	2646	Open in IMG/M
3300025784\|Ga0209200_1008990	All Organisms → cellular organisms → Archaea → Euryarchaeota	6653	Open in IMG/M
3300025859\|Ga0209096_1217243	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	715	Open in IMG/M
3300025952\|Ga0210077_1062145	All Organisms → cellular organisms → Archaea	773	Open in IMG/M
3300027051\|Ga0209269_1001328	All Organisms → cellular organisms → Archaea	13523	Open in IMG/M
3300027051\|Ga0209269_1002881	All Organisms → cellular organisms → Archaea	6859	Open in IMG/M
3300027051\|Ga0209269_1006460	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3665	Open in IMG/M
3300027051\|Ga0209269_1010962	Not Available	2460	Open in IMG/M
3300027051\|Ga0209269_1025371	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1247	Open in IMG/M
3300027051\|Ga0209269_1025958	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300027051\|Ga0209269_1040609	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	844	Open in IMG/M
3300027051\|Ga0209269_1041320	Not Available	833	Open in IMG/M
3300027051\|Ga0209269_1066421	Not Available	570	Open in IMG/M
3300027796\|Ga0209373_10376851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	565	Open in IMG/M
3300027877\|Ga0209293_10046462	Not Available	1757	Open in IMG/M
3300027877\|Ga0209293_10287879	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	831	Open in IMG/M
3300027885\|Ga0209450_10122725	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1758	Open in IMG/M
3300027885\|Ga0209450_10839585	Not Available	660	Open in IMG/M
3300027897\|Ga0209254_10104992	All Organisms → cellular organisms → Archaea	2365	Open in IMG/M
3300027899\|Ga0209668_10382102	All Organisms → cellular organisms → Archaea → Euryarchaeota	919	Open in IMG/M
3300027899\|Ga0209668_10780504	Not Available	643	Open in IMG/M
3300027900\|Ga0209253_10023048	Not Available	5241	Open in IMG/M
3300027900\|Ga0209253_10067906	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	2942	Open in IMG/M
3300027900\|Ga0209253_10072713	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
3300027900\|Ga0209253_10185162	Not Available	1670	Open in IMG/M
3300027900\|Ga0209253_10185162	Not Available	1670	Open in IMG/M
3300027900\|Ga0209253_11021694	Not Available	569	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1082783	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300028634\|Ga0302242_1062273	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300028883\|Ga0272443_10027031	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	4062	Open in IMG/M
3300031539\|Ga0307380_10125406	Not Available	2595	Open in IMG/M
3300031565\|Ga0307379_10055562	All Organisms → cellular organisms → Archaea	4518	Open in IMG/M
3300031566\|Ga0307378_10533555	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300031873\|Ga0315297_10952232	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	711	Open in IMG/M
3300031997\|Ga0315278_10279507	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	1724	Open in IMG/M
3300032053\|Ga0315284_10732357	Not Available	1156	Open in IMG/M
3300032053\|Ga0315284_11554875	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	698	Open in IMG/M
3300032118\|Ga0315277_10131137	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2797	Open in IMG/M
3300032118\|Ga0315277_10636713	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	1039	Open in IMG/M
3300032118\|Ga0315277_11397755	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → unclassified Methanolinea → Methanolinea sp.	606	Open in IMG/M
3300032516\|Ga0315273_12390991	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanolinea → unclassified Methanolinea → Methanolinea sp.	613	Open in IMG/M
3300033408\|Ga0316605_11319598	Not Available	698	Open in IMG/M
3300033408\|Ga0316605_11909656	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	578	Open in IMG/M
3300033413\|Ga0316603_11011579	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	785	Open in IMG/M
3300033413\|Ga0316603_11174828	Not Available	727	Open in IMG/M
3300033414\|Ga0316619_10915644	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	758	Open in IMG/M
3300033414\|Ga0316619_11472071	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	610	Open in IMG/M
3300033414\|Ga0316619_11670006	Not Available	575	Open in IMG/M
3300033419\|Ga0316601_100276784	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1523	Open in IMG/M
3300033419\|Ga0316601_100857336	Not Available	901	Open in IMG/M
3300033419\|Ga0316601_102542572	Not Available	515	Open in IMG/M
3300033434\|Ga0316613_11156213	Not Available	533	Open in IMG/M
3300033480\|Ga0316620_12477251	Not Available	516	Open in IMG/M
3300033483\|Ga0316629_10340225	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1032	Open in IMG/M
3300033485\|Ga0316626_10450473	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1086	Open in IMG/M
3300033486\|Ga0316624_11052586	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	735	Open in IMG/M
3300033487\|Ga0316630_10098597	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1950	Open in IMG/M
3300033487\|Ga0316630_10950223	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	748	Open in IMG/M
3300033488\|Ga0316621_10457836	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	883	Open in IMG/M
3300033488\|Ga0316621_10750585	Not Available	709	Open in IMG/M
3300033488\|Ga0316621_11410311	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	532	Open in IMG/M
3300033493\|Ga0316631_10318923	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	627	Open in IMG/M
3300033521\|Ga0316616_100844969	Not Available	1121	Open in IMG/M
3300033521\|Ga0316616_104698471	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	514	Open in IMG/M
3300033991\|Ga0334965_0038973	Not Available	2321	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.95%
Engineered	Engineered	32.05%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.08%
Terrestrial	Environmental → Terrestrial	19.87%
Wastewater	Engineered → Wastewater	17.95%
Lab Enrichment	Engineered → Lab Enrichment	12.82%
Solid Waste	Engineered → Solid Waste	0.64%
Built Environment	Engineered → Built Environment	0.64%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	40.38%
Soil	Environmental → Terrestrial → Soil	17.95%
Defined Media	Engineered → Lab Enrichment → Defined Media	12.82%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	11.54%
Marine	Environmental → Aquatic → Marine	7.05%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	5.77%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.28%
Sediment	Environmental → Aquatic → Sediment	0.64%
Oil Reservoir	Environmental → Terrestrial → Oil Reservoir	0.64%
Landfill	Engineered → Solid Waste → Landfill	0.64%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.64%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	0.64%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.03%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	12.82%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	11.54%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.41%
Lake	Environmental → Aquatic → Freshwater → Lake	6.41%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.41%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	5.77%
Pond	Environmental → Aquatic → Freshwater → Pond	1.92%
Clay	Environmental → Terrestrial → Soil → Clay	1.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.28%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified	0.64%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.64%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.64%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	17.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.03%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	12.82%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	11.54%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.77%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.21%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.21%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.92%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified	0.64%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.64%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.64%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	16.03%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	10.90%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	10.90%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.26%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	8.33%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.05%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.77%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	5.77%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.13%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.21%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.92%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.92%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.28%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.64%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.64%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	0.64%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.64%
Oil Sands	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Oil Sands	0.64%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.64%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.64%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	0.64%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876020	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300000568	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001567	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300001580	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6	Engineered	Open in IMG/M
3300002219	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300002703	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5	Engineered	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300004012	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005144	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG	Engineered	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006885	Final time point T34 (3) (live) benzoate enrichments of Methanogenic microbial communities using Athabasca oil sands as inoculum	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009388	Metatranscriptome sequencing of an Anaerobic Hexadecane-Degrading Microbial Consortia from University of California, San Diego, USA - Hexadecane	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009781	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG	Engineered	Open in IMG/M
3300009782	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC048_MetaG	Engineered	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300012018	Activated sludge microbial communities from Shanghai, China - membrane bioreactor - Activated sludge (MBR)	Engineered	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013086	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m	Environmental	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300025563	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025748	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025784	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025952	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028634	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Lys	Engineered	Open in IMG/M
3300028883	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Acet-12	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031552	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-20	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2244013983	2236876020	Hydrocarbon Resource Environments	MNKILFMVGLSIALAAAALLFLNIIESGVAAIIGIIGLGLIAVSR
Draft_00062803	3300000032	Hydrocarbon Resource Environments	MNKTLFIAGLCIALAAAALLFLDIIESGVAALVGFIGIGLIAVSGSPKPRC*
Draft_00692722	3300000032	Hydrocarbon Resource Environments	MHKILFLAGLCITLTSAALLFFGILEPGLAAMVGIVGIGLIAASGMSNIKRL*
Draft_01260712	3300000032	Hydrocarbon Resource Environments	MNKILFMVGLSIALAAAALLFLNIIESGVAAIIGIIGLGLIAVSR*
Draft_100309932	3300000568	Hydrocarbon Resource Environments	MHKILFLAGLCITLTSAALLFFGILEPGXAAMVGIVGIGLIAASGMSNIKRL*
JGIcombinedJ13530_1008650632	3300001213	Wetland	MNLKSMHMNKILFMVGLYIAFAASALLFLNIIESGVAAVIGILGIGLIAASGSSKIKRLKIESWGL*
JGIcombinedJ13530_1079435252	3300001213	Wetland	MNKILFIAGLCIALGAAGLLFLNIIESGVAAVIGILGIGLIATSGRL*
Draft_1000013852	3300001567	Hydrocarbon Resource Environments	MNKILFIVGLTIALAAASLLFLNIIESGVAAMIGIIGIGLIAVSR*
Draft_100232912	3300001567	Hydrocarbon Resource Environments	MKKILFMVGLCIALGAAALLFLDIIESGVAAMIGIVGIGLIGASGISNIKRL*
Draft_1001168813	3300001580	Hydrocarbon Resource Environments	KSFKEGENETPMHKILFPAGLCITLTSAALLFLGILEPGVAALVGIVGIGLIAASGMSNIXXL*
Draft_100532024	3300001580	Hydrocarbon Resource Environments	MHKILFLAGLCIALTSAALLFFGILEPGLAAMIGIVGIGLIAASGMSNIKRL*
SCADCLC_1007848711	3300002219	Hydrocarbon Resource Environments	MNKILFIVGLCIALAVAALLFFNIIESGVAAVIGIPGIGLIGASGSSKIKRL*
draft_110390773	3300002703	Hydrocarbon Resource Environments	MNKILFIVGLCIAIGAAALLFLDIIESGVAALIGIVGIGLIGASGISNIKRL*
draft_110761641	3300002703	Hydrocarbon Resource Environments	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIAASHVDRKSSGCK*
JGI20214J51088_100954304	3300003432	Wetland	MNKILVIVGLCIALAAAALLFLXSIESGVATVIGIMGIGLIAASGYSTIKRL*
JGI20214J51650_101475751	3300003541	Wetland	MNKILVIVGLCIALAAAALLFLRSIESGVATVIGIMGIGLIAASGYSTIKRL*
Ga0031656_100286711	3300003858	Freshwater Lake Sediment	MNKILFMVGLCIALGAGALLFLDIIESGAAAMIGIIGIGLIGASGISNIKRL*
Ga0031653_100291184	3300003859	Freshwater Lake Sediment	MNKILFIVGLCIALGAAALLFLDIIESGVAAMIGIIGIGLIGASGISNIKRL*
Ga0055464_102099361	3300004012	Natural And Restored Wetlands	MNKILFTVGLCIALAAAALLFLNIIESGVAALIGILGIGLIGASGIDRKSSGGE*
Ga0055483_101426691	3300004063	Natural And Restored Wetlands	MNKILFIVGLCIALGAATLLFFGIIESGVAAMIGIIGIGLIAVSGISDIKRM*
Ga0055483_102204082	3300004063	Natural And Restored Wetlands	MNKILFIVGLCIALVAAALLFLNIIESGVAAVIGILGIGLIGASGSSKIKRFK*
Ga0066602_102111181	3300004151	Freshwater	MNIKLFIPGLLIVAIAATLLLLNVIESGVAAAIGILGIGLIAASGKRKTK*
Ga0066603_100765314	3300004154	Freshwater	MNIKLFIPGLLIVAIAATLLLLNVIESGVAAAIGILGIGLIAASGKRK
Ga0069718_101582531	3300004481	Sediment	VNKILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASHADRKSSGCN*
Ga0069718_111759781	3300004481	Sediment	MHKILFLAGLCIALTSAALLFFGIIEPGLAAMIGIVGIGLIAASGMSNIKRL*
Ga0068711_10058075	3300005144	Enrichment Culture	MNKILFIVGLCIALAAAALLFLDIIESGVAAMIGILGIGLIAASSVDRKSSGCK*
Ga0068711_10169545	3300005144	Enrichment Culture	MNKPLFIAAVCIAVAAASLLFLNIIESGIAAVIGILGIGLIALSGRL*
Ga0068711_10363101	3300005144	Enrichment Culture	MNKILFIVGLCIALAAASLLFLNIIESGVAAVIGILGIGLIAASGRV*
Ga0068711_10363963	3300005144	Enrichment Culture	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIAASGRSKPSGCK*
Ga0068711_10390902	3300005144	Enrichment Culture	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGIVGIGLIAASGTVDRKSSGCK*
Ga0068711_10515292	3300005144	Enrichment Culture	MNKILFIVGLCIALAAASLLFLSIIESGVAAVIGILGIGLIGASGRI*
Ga0068711_10646192	3300005144	Enrichment Culture	MNKILFIVGLCIALAAASLLFLNIIESGVAAVIGILGIGLIAASGRI*
Ga0074469_103948331	3300005832	Sediment (Intertidal)	MNKILFIVGLCIALAAAVLLFLNIIESGVAAMIGILGIGLIVASSVDRKSSGCK*
Ga0079037_1000513726	3300006224	Freshwater Wetlands	MNKILFIGGLCIALAAAALLVFNIIESGVAAMIGILGIGLIAVSGRL*
Ga0079037_1024579071	3300006224	Freshwater Wetlands	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIG
Ga0102512_100002175	3300006885	Oil Sands	MNKILFISGLCIALAAAALLFLNIIESGVAAVIGIVGIGLIAASGRL*
Ga0079303_101123462	3300006930	Deep Subsurface	MNKILFIVGLCIALAAAALLFLNILESGVAALIGILGIGLIAVSGRL*
Ga0079303_104350942	3300006930	Deep Subsurface	MNKILFIGGLCIALAAAALLVFNIIESGVAAMIGILGIGLIGASGLSNIKRL*
Ga0102851_103882073	3300009091	Freshwater Wetlands	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGISNIKRL*
Ga0102851_104122592	3300009091	Freshwater Wetlands	MNKILFIVGLCIALSAVTLLFLDIIESGVAAMIGIIGIGL
Ga0102851_104529052	3300009091	Freshwater Wetlands	MNKILFIVRLCIALAAAALLFLNILESGVAAVIGILGIGLIAVSGRL*
Ga0102851_109727431	3300009091	Freshwater Wetlands	MNKILFIAGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGLSNIKRL*
Ga0102851_111188263	3300009091	Freshwater Wetlands	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGMSNSRRL*
Ga0102851_125888151	3300009091	Freshwater Wetlands	FGKLPLKNEIVEGTYVNKILFIIGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSHADRKSSGCK*
Ga0102851_131986871	3300009091	Freshwater Wetlands	MKKILFIVGLCIALTAAALLFLNIIESGVAAVIGILGIGLIGASHADRKSSGCK*
Ga0115026_101433613	3300009111	Wetland	MNKTLFIVGLCIAFGAAALLFFDIIESGVAALIGIVGIGLIGASGISNIKRL*
Ga0115026_101563583	3300009111	Wetland	MNKILFIVGLCIALAAAALLFFNILESGVAALIGILGIGLIAVSGRL*
Ga0115026_102558251	3300009111	Wetland	MNKILFIAGLCIALGAAGLLLLNIIESGVAAVIGILGIGLIATSGRL*
Ga0115027_109865971	3300009131	Wetland	MNKILFIVGLCIALVAAALLFLNIIESGVAAMIGILGIGLIATSGRL*
Ga0113563_110650072	3300009167	Freshwater Wetlands	VNKILFIAGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSLADRKSSGCNERVECYQRDWIIFL*
Ga0113563_124678722	3300009167	Freshwater Wetlands	MNKILFIVGLCIALAAAALLFLNILESGVAALIGILGIGLIAISGRL*
Ga0115028_103363532	3300009179	Wetland	MVFDRSHMNKILFIAGLSIALTAAALLVLNIIESGVAAMIGIIGIGLIAVSGRL*
Ga0115028_113921051	3300009179	Wetland	MNKILFIVGLCIALAAAALLFLNILESGVAALIGIIGI
Ga0103809_100001298	3300009388	Enrichment Culture	MHKILFLAGLCIALTSAALLFFGIIEPGLAAMIGIVGIGLIAASGMSHIKRL*
Ga0116182_10349422	3300009666	Anaerobic Digestor Sludge	MNRILFITGLCIALMAAALLFFSIIEPGVAAIIGILGIGLIAASGMSHIKRM*
Ga0116182_10540181	3300009666	Anaerobic Digestor Sludge	MNKILFLAGLCIALTAAALLFFGLIEPGPAAVIGIVGIGLIGASGVSNIKRL*
Ga0116173_10610723	3300009674	Anaerobic Digestor Sludge	GLGIALTSAALLFFGIIEPGVAAMVGILGIGLIGMSHIKRM*
Ga0116173_14379441	3300009674	Anaerobic Digestor Sludge	MNKILFTIGLFIALGAAALLFLHIIESGVAAVIGILGIGVIAVSGQLKGNG*
Ga0116174_103665431	3300009681	Anaerobic Digestor Sludge	FLAGLCIALTAAALLFFDVIEPGHAAVIGIVGIGLIGASGMSHIRRL*
Ga0116144_100377253	3300009687	Anaerobic Digestor Sludge	MNKILFLVGLCIALTSAALLFFGLIEPGPAAVIGIVGIGLIGASGMSHIRRL*
Ga0116186_11410952	3300009689	Anaerobic Digestor Sludge	MHKILFIAGLGIALTSSALLFFGIIEPGVAAMVGILGIGLIGMSHIKRM*
Ga0116141_103210282	3300009693	Anaerobic Digestor Sludge	MHKILFIAGLGIALTSAALLFFGIIEPGVAAMVGILGIGLIGMSHIKRM*
Ga0116178_100101054	3300009781	Anaerobic Digestor Sludge	MNIALFLAGLCIALTAAALLFFDIIEPGLAAVIGIVGIGLIGASGMSHIRRL*
Ga0116157_100495453	3300009782	Anaerobic Digestor Sludge	MNKILFLAGLCIALVAAALLFFGLIEPGPAAVIGIVGIGLIGASGVSNIKRL*
Ga0116157_105923792	3300009782	Anaerobic Digestor Sludge	MLFIAGLCIALTSAALLFFDIIEAGVAAMVGILGIGLIGASGMSHIKRL*
Ga0116236_100747074	3300010353	Anaerobic Digestor Sludge	MNTMLFIAGLCIALTSAALLFFDIIEAGVAAMVGILGIGLIGASGMSHIKRL*
Ga0119867_11836222	3300012018	Activated Sludge	MNKTLFVIGLLIAGLAAVLLLMNVIESGVAAAIGILGIGLIAA
Ga0153915_100136448	3300012931	Freshwater Wetlands	MNRILFIGGLCIALAAAALLVFNIIESGVAAMIGILGIGLIAVSGRL*
Ga0153915_100859944	3300012931	Freshwater Wetlands	MNKILFIVGLWIALVAAALLFLNIIESGVAAVIGILGIGLIGASGSSKIKRL*
Ga0153915_103253532	3300012931	Freshwater Wetlands	MNKILFIVGLCIALAAAALLFFNIIESGVAAVIGILGIGLIATSGRLDRK*
Ga0153915_105377713	3300012931	Freshwater Wetlands	MNKILFLILYIGGLCIALGAAALLFFGIIESGVAAMIGIIGIALISGSGISIFMRP*
Ga0153915_107034302	3300012931	Freshwater Wetlands	MNKILFIVGLCIALAAAAFLFLNIIESGVAAMIGILGIGLIGASSVDRKSSGCK*
Ga0153915_107253693	3300012931	Freshwater Wetlands	MNKILFIVGLCIAVTAAALLFLDIIESGVAAMIGIVGIGLIGASGISNIKRL*
Ga0153915_108019672	3300012931	Freshwater Wetlands	MNKILFIAGLCIALAAAALLFFNIIESGVAALIGILGIGLIATSGRLDRK*
Ga0153915_111201623	3300012931	Freshwater Wetlands	MNKILFIIGLCIALTAAALLFLNLIESGVAAVIGILGIGLIAVSGRL*
Ga0153915_116608441	3300012931	Freshwater Wetlands	MNKILFIVGLGIALAAAALLFLNIIESGVAAMIGILGIGLIAASHVDRKSSGCK*
Ga0153915_120759641	3300012931	Freshwater Wetlands	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASSVDR
Ga0153915_121280502	3300012931	Freshwater Wetlands	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIAASGRLDRK*
Ga0153916_102960803	3300012964	Freshwater Wetlands	MNKILFIVGLCIALAAAALLFLSIIESGVAAVIGILGIGLIGASSVDRKSSGCK*
Ga0153916_105995092	3300012964	Freshwater Wetlands	MNKILFIVGLGIALAAAALLFLNIIESGVAAMIGILGIGLIAASHVDRKSNGYK*
Ga0153916_107834781	3300012964	Freshwater Wetlands	MNKILFIVGLCIALAAGVFLFLNIIESGVAAMIGILGIGLIGASHIDRKSSSRK*
Ga0153916_122986001	3300012964	Freshwater Wetlands	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIGASSVDRKSSGCR*
Ga0153916_132384491	3300012964	Freshwater Wetlands	MNKILFIAGLCIALAAAALLFLDVLESGVAALIGILGIGLIATSGRLDR
Ga0163202_10048541	3300013086	Freshwater	MNKILFIVGLCIALAAAALLFLDLIESGVAAVIGILGIGLIAASGRL*
Ga0172380_100218795	3300014205	Landfill Leachate	MHKILFLAGLCITLTSAALLFLGILEPGLAALVGIVGIGLIAASGMSNIKRL*
Ga0210112_11116422	3300025563	Natural And Restored Wetlands	MNKILFTVGLCIALAAAALLFLNIIESGVAALIGILGIGLIGASGIDRKSSGGE
Ga0209201_100006114	3300025708	Anaerobic Digestor Sludge	MNIALFLAGLCIALTAAALLFFDIIEPGLAAVIGIVGIGLIGASGMSHIRRL
Ga0208197_10495501	3300025720	Anaerobic Digestor Sludge	MHKILFIAGLGIALTSSALLFFGIIEPGVAAMVGILGIGLIGMSHIKRM
Ga0208459_10304464	3300025748	Anaerobic Digestor Sludge	MSIALFLAGLCIALTAAALLFFDIIEPGLAAVIGIVGIGLIGASGMSHIRRL
Ga0209200_10089904	3300025784	Anaerobic Digestor Sludge	MNKILFLVGLCIALTSAALLFFGLIEPGPAAVIGIVGIGLIGASGMSHIRRL
Ga0209096_12172432	3300025859	Anaerobic Digestor Sludge	MNRILFITGLCIALMAAALLFFSIIEPGVAAIIGILGIGLIAASGMS
Ga0210077_10621452	3300025952	Natural And Restored Wetlands	MNKILFIVGLCIALVAAALLFLNIIESGVAAVIGILGIGLIGASGSSKIKRFK
Ga0209269_100132815	3300027051	Enrichment Culture	MREVLGLCIALAAAALLFLNIIESGVAAMIGIPGIGLIVASGISKIKRL
Ga0209269_10028815	3300027051	Enrichment Culture	MNKILFIIGLCIALTAAALLFLNIIESGVAAVIGILGIGLIAASGRL
Ga0209269_10064603	3300027051	Enrichment Culture	MNKILFIVGLCIALAAAALLFLDIIESGVAAMIGILGIGLIAASSVDRKSSGCK
Ga0209269_10109622	3300027051	Enrichment Culture	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIAASGRSKPSGCK
Ga0209269_10253713	3300027051	Enrichment Culture	NKPLFIAAVCIAVAAASLLFLNIIESGIAAVIGILGIGLIALSGRL
Ga0209269_10259582	3300027051	Enrichment Culture	MNKTVLGLFLFIVGLCIALAAAALLFLHIIESGVAAMIGILGIGLIGAAGAVFASRS
Ga0209269_10406091	3300027051	Enrichment Culture	MNKPLVIAGVCIAVAAASLLFLNIIESGIAAVIGILGIGLI
Ga0209269_10413202	3300027051	Enrichment Culture	MNKILFIVGLCIALAAASLLFLNIIESGVAAVIGILGIGLIAASGRV
Ga0209269_10664212	3300027051	Enrichment Culture	MNKILFIVGLCIALAAASLLFLSIIESGVAAVIGILGIGLIGASSVDR
Ga0209373_103768512	3300027796	Freshwater	MNIKLFIPGLLIVAIAATLLLLNVIESGVAAAIGILGIGLI
Ga0209293_100464623	3300027877	Wetland	MNKILFIGGLCIALAAAALLVFNIIESGVAAMIGILGIGLIAVSGRL
Ga0209293_102878792	3300027877	Wetland	MNKILFIVGLCIALAAAALLFFNILESGVAALIGILGIGLIAVSGRL
Ga0209450_101227252	3300027885	Freshwater Lake Sediment	VNKILCIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSHADRKTSGCN
Ga0209450_108395852	3300027885	Freshwater Lake Sediment	MNKILFMVGLCIALGAVALLFLDIIESGAAAMIGIIGIGLISASGISNIKRL
Ga0209254_101049921	3300027897	Freshwater Lake Sediment	MHKILFLAGLCIALTSAALLFFGIIEPGVAAMIGIVGIGLIAASGMSNIKRL
Ga0209668_103821021	3300027899	Freshwater Lake Sediment	MNKILFIAGLCIALASAALLFFDIIESGVAAVIGILGIGLIAASGMSKIKRL
Ga0209668_107805042	3300027899	Freshwater Lake Sediment	MNLLRGTHMNKILFIVGLCIALAAAALLFLNIIQSGVAAMIGILGIGLIGASHVDRKSSGCK
Ga0209253_100230489	3300027900	Freshwater Lake Sediment	MNKILFIVGLCIALGAAALLFLDIIESGVAAMIGIIGIGLIGASGISNIKRL
Ga0209253_100679067	3300027900	Freshwater Lake Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASHVDRKSSGCK
Ga0209253_100727132	3300027900	Freshwater Lake Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIAASGGSKIKRL
Ga0209253_101851621	3300027900	Freshwater Lake Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIATSGRM
Ga0209253_101851623	3300027900	Freshwater Lake Sediment	MNKILFIVGLCIALAAAGFLFLNIIESGVAAVIGILGIGLIATSGRL
Ga0209253_110216942	3300027900	Freshwater Lake Sediment	MNKILFIVGLCIALAAAALHLFNIIESGVAAMIGILGIGLIAVSGRLSPRCDLPA
(restricted) Ga0255343_10827832	3300028561	Wastewater	MNKILFTIGLFIALGAAALLFLHIIESGVAAVIGILGIGVIAVSGQLKGNG
Ga0302242_10622732	3300028634	Activated Sludge	APHMNKILFTIGLFIALGAAALLFLHIIESGVAAVIGILGIGVIAVSGQLKGNG
Ga0272443_100270314	3300028883	Marine Sediment	MNKLLFIVGLCIALSAAALLFFGIIESGVAALIGILGIGLIGAAGAISASRS
Ga0307380_101254064	3300031539	Soil	MTTLKGLAMNIILFFIGLAICLTAAGLLVLDVIESGVAALIGIVGIGLIGSSAIQRSQK
Ga0315542_10075006	3300031552	Salt Marsh Sediment	MLLSGLIIAVSAALLLFVGAIASGPAAVIGIVGIGLIGASAPLRRRP
Ga0307379_100555623	3300031565	Soil	MNKILFLILFIGGLCIALSAATLLFFGIIESGVAAMIGIVGIVLISASGISNIKRL
Ga0307378_105335551	3300031566	Soil	MFINKTLFIIGLTICVTAAGLLLLNVIESGVAAAIGILGIGLIASSRKGK
Ga0315297_109522322	3300031873	Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIGASGRCKSSGCK
Ga0315278_102795074	3300031997	Sediment	MNKILFIVGLCIALAAAVLLLLNIIESGVAAVIGILGIGLIGASGRCKSSGCK
Ga0315284_107323571	3300032053	Sediment	MNKILFIVGLSIALVAAARLFLNIIESGVAAVIGILGIGMIAASGISKIKRL
Ga0315284_115548752	3300032053	Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASGRCKSSGCK
Ga0315277_101311375	3300032118	Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAVIGILGIGLIGASGRL
Ga0315277_106367131	3300032118	Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASS
Ga0315277_113977553	3300032118	Sediment	KPMNNILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASSISKIKRL
Ga0315273_123909912	3300032516	Sediment	MNKILFIVGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASSISKIKRL
Ga0316605_113195981	3300033408	Soil	MNKILFIGGLCIALAAAALLLLNIIESGVAAMIGILGIGLIAVSGSGKFSLS
Ga0316605_119096562	3300033408	Soil	MKKILFIVGLCIALTAAALLFLNIIESGVAAVIGILGIGLIGASHADRKSSGCK
Ga0316603_101535926	3300033413	Soil	VNIILFIAGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSLADRKSSGCNER
Ga0316603_110115791	3300033413	Soil	LNKILFIAGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGISNIKRL
Ga0316603_111748282	3300033413	Soil	MNRILFIGGLCIALAAAALLVFNIIESGVAAMIGILGIGLIAVSGRL
Ga0316619_109156441	3300033414	Soil	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGISNIKRL
Ga0316619_114720711	3300033414	Soil	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGMSNSRRL
Ga0316619_116700062	3300033414	Soil	MNKILFIAGLCIALGAAGLLLLNIIESGVAAVIGILGIGLIATSGRL
Ga0316601_1002767845	3300033419	Soil	VNKILFIAGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGASGISNIKRL
Ga0316601_1008573362	3300033419	Soil	MNKILFIAGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGVSNVRRL
Ga0316601_1025425722	3300033419	Soil	MNKILFIAGLCIALGAAGLLFLNIIESGVAAVIGILGIGLIATSGRL
Ga0316613_111562131	3300033434	Soil	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGTSHADRKSSG
Ga0316620_124772511	3300033480	Soil	MNKILFIVGLCIALAAAALLFLNIIESGVAAIIGILGIGLFAASGRFNNF
Ga0316629_103402251	3300033483	Soil	STYVNKILFIAGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSHADRKSSGCN
Ga0316626_104504733	3300033485	Soil	MKKILFIVGLCIALTAAALLFLNIIESGVAAVIGILGIGLIGASHADRKSGGCK
Ga0316624_110525861	3300033486	Soil	MIKILFIVGLCIALAAAVLLFLNIIESGVAAMIGILGIGLIGASSVDRKSSGCK
Ga0316630_100985972	3300033487	Soil	MNKILFIAGLCIALGAAALLFFDIIESGVAAMIGILGIGLIGASGLSNIKRL
Ga0316630_109502232	3300033487	Soil	MHMNKILFIVGLCIALSAVTLLFLDIIESGVAAMIGIIGIGLIGASGISNIKRL
Ga0316621_104578362	3300033488	Soil	MHMNKILFIVGLCIALSAVTLLFLDIIESGFAAMIGIIGIGLIGASGISNIKRL
Ga0316621_107505851	3300033488	Soil	LFIVGLCIALAAAALLFLNIIESGVAAIIGILGIGLFAASGRFNNF
Ga0316621_114103112	3300033488	Soil	VNKILFIAGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSHADRKSSGCNE
Ga0316631_103189231	3300033493	Soil	KILFIVGLCIALAAAALLFLNILESGVAALIGIIGIGLIAVSGRL
Ga0316616_1008449691	3300033521	Soil	MNKILFIVGLCIALGAAALLFFDIIESGVAAMIGILGIGL
Ga0316616_1046984711	3300033521	Soil	MNRILFIGGLCIALAAAALLVFNIIESGVAAMIGILGIGLIGASGISKIKRL
Ga0316617_1001929081	3300033557	Soil	VNKILFIAGLCIALAAAALLFLNIIESGVAAMIGILGIGLIGTSLADRKSSGCNERVECYQRDWIIFL
Ga0334965_0038973_1719_1877	3300033991	Sediment	MHKILFLAGLCIALTSAALLFFGIIEPGVAAMIGIVGIGLIAASGMSHIKRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters