Sample 3300010074

3300010074: Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300010074 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110119 \| Gp0146846 \| Ga0127439
Sample Name	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	25375899
Sequencing Scaffolds	88
Novel Protein Genes	91
Associated Families	77

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3
Not Available	65
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	2
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Leadbetterella → Leadbetterella byssophila	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Grasslands Soil Microbial Communities From The Angelo Coastal Reserve, California, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil → Grasslands Soil Microbial Communities From The Angelo Coastal Reserve, California, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	grassland biome → biosphere reserve → grassland soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	USA: Angelo Coastal Reserve, California
Coordinates	Lat. (^o)	39.7181	Long. (^o)	-123.6527	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000611	Metagenome / Metatranscriptome	987	Y
F000646	Metagenome / Metatranscriptome	962	Y
F000734	Metagenome / Metatranscriptome	915	Y
F001346	Metagenome / Metatranscriptome	718	Y
F001679	Metagenome / Metatranscriptome	653	Y
F001941	Metagenome / Metatranscriptome	614	Y
F002020	Metagenome / Metatranscriptome	603	Y
F002557	Metagenome / Metatranscriptome	548	Y
F003427	Metagenome / Metatranscriptome	487	Y
F003787	Metagenome / Metatranscriptome	468	Y
F003911	Metagenome / Metatranscriptome	462	Y
F005001	Metagenome / Metatranscriptome	415	Y
F007777	Metagenome / Metatranscriptome	345	Y
F008843	Metagenome / Metatranscriptome	327	Y
F011643	Metagenome / Metatranscriptome	288	Y
F012439	Metagenome / Metatranscriptome	280	Y
F012589	Metagenome / Metatranscriptome	279	Y
F013305	Metagenome / Metatranscriptome	272	Y
F014482	Metagenome / Metatranscriptome	262	Y
F014631	Metagenome / Metatranscriptome	261	Y
F015190	Metagenome / Metatranscriptome	256	Y
F015378	Metagenome / Metatranscriptome	255	Y
F015442	Metagenome / Metatranscriptome	254	Y
F016001	Metagenome / Metatranscriptome	250	Y
F016972	Metagenome / Metatranscriptome	243	Y
F016975	Metagenome / Metatranscriptome	243	Y
F019453	Metagenome / Metatranscriptome	229	Y
F019691	Metagenome / Metatranscriptome	228	Y
F019767	Metagenome / Metatranscriptome	227	Y
F020585	Metagenome / Metatranscriptome	223	N
F020700	Metagenome / Metatranscriptome	222	Y
F021064	Metagenome / Metatranscriptome	220	Y
F021803	Metagenome / Metatranscriptome	217	Y
F022652	Metagenome / Metatranscriptome	213	Y
F023352	Metagenome / Metatranscriptome	210	Y
F023381	Metagenome / Metatranscriptome	210	Y
F024104	Metagenome / Metatranscriptome	207	Y
F024746	Metagenome / Metatranscriptome	204	Y
F027793	Metagenome / Metatranscriptome	193	Y
F029372	Metagenome / Metatranscriptome	188	Y
F030355	Metagenome / Metatranscriptome	185	Y
F032287	Metagenome / Metatranscriptome	180	Y
F032386	Metagenome / Metatranscriptome	180	Y
F032410	Metagenome / Metatranscriptome	180	Y
F032547	Metagenome / Metatranscriptome	179	N
F033437	Metagenome / Metatranscriptome	177	Y
F036176	Metagenome / Metatranscriptome	170	Y
F037647	Metagenome / Metatranscriptome	167	Y
F039900	Metagenome / Metatranscriptome	162	Y
F043243	Metagenome / Metatranscriptome	156	Y
F044534	Metagenome / Metatranscriptome	154	Y
F045561	Metagenome / Metatranscriptome	152	Y
F045847	Metagenome / Metatranscriptome	152	Y
F046210	Metagenome / Metatranscriptome	151	N
F047514	Metagenome / Metatranscriptome	149	N
F048058	Metagenome / Metatranscriptome	148	Y
F052033	Metagenome / Metatranscriptome	143	Y
F052413	Metagenome / Metatranscriptome	142	Y
F055463	Metagenome / Metatranscriptome	138	Y
F055564	Metagenome / Metatranscriptome	138	Y
F057921	Metagenome / Metatranscriptome	135	N
F058488	Metagenome / Metatranscriptome	135	Y
F060086	Metagenome / Metatranscriptome	133	Y
F060670	Metagenome / Metatranscriptome	132	Y
F062778	Metagenome / Metatranscriptome	130	Y
F063173	Metagenome / Metatranscriptome	130	Y
F065470	Metagenome / Metatranscriptome	127	Y
F066797	Metagenome / Metatranscriptome	126	Y
F067356	Metagenome / Metatranscriptome	125	Y
F068669	Metagenome / Metatranscriptome	124	N
F073973	Metagenome / Metatranscriptome	120	Y
F079670	Metagenome / Metatranscriptome	115	N
F080934	Metagenome / Metatranscriptome	114	Y
F083035	Metagenome / Metatranscriptome	113	Y
F086758	Metagenome / Metatranscriptome	110	Y
F104818	Metagenome / Metatranscriptome	100	Y
F104888	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0127439_100066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
Ga0127439_101354	Not Available	908	Open in IMG/M
Ga0127439_101415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
Ga0127439_104213	Not Available	725	Open in IMG/M
Ga0127439_104257	Not Available	582	Open in IMG/M
Ga0127439_104778	All Organisms → cellular organisms → Eukaryota	678	Open in IMG/M
Ga0127439_108394	Not Available	807	Open in IMG/M
Ga0127439_108750	Not Available	1830	Open in IMG/M
Ga0127439_109279	Not Available	564	Open in IMG/M
Ga0127439_109843	Not Available	587	Open in IMG/M
Ga0127439_109891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	609	Open in IMG/M
Ga0127439_110761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
Ga0127439_111944	Not Available	515	Open in IMG/M
Ga0127439_112595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	692	Open in IMG/M
Ga0127439_112666	Not Available	522	Open in IMG/M
Ga0127439_114027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
Ga0127439_114647	Not Available	544	Open in IMG/M
Ga0127439_117099	Not Available	582	Open in IMG/M
Ga0127439_117415	Not Available	574	Open in IMG/M
Ga0127439_118450	Not Available	632	Open in IMG/M
Ga0127439_120268	Not Available	719	Open in IMG/M
Ga0127439_121599	Not Available	513	Open in IMG/M
Ga0127439_121607	Not Available	564	Open in IMG/M
Ga0127439_122025	Not Available	580	Open in IMG/M
Ga0127439_122603	Not Available	563	Open in IMG/M
Ga0127439_122959	Not Available	1051	Open in IMG/M
Ga0127439_124261	Not Available	740	Open in IMG/M
Ga0127439_124632	Not Available	748	Open in IMG/M
Ga0127439_125241	Not Available	608	Open in IMG/M
Ga0127439_126007	Not Available	569	Open in IMG/M
Ga0127439_126959	Not Available	1223	Open in IMG/M
Ga0127439_127074	Not Available	600	Open in IMG/M
Ga0127439_127116	Not Available	577	Open in IMG/M
Ga0127439_127442	Not Available	536	Open in IMG/M
Ga0127439_127614	Not Available	574	Open in IMG/M
Ga0127439_128718	Not Available	646	Open in IMG/M
Ga0127439_128800	Not Available	560	Open in IMG/M
Ga0127439_130790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	527	Open in IMG/M
Ga0127439_130804	Not Available	772	Open in IMG/M
Ga0127439_130822	Not Available	558	Open in IMG/M
Ga0127439_131011	Not Available	503	Open in IMG/M
Ga0127439_131115	Not Available	559	Open in IMG/M
Ga0127439_131594	Not Available	1080	Open in IMG/M
Ga0127439_131754	Not Available	505	Open in IMG/M
Ga0127439_132093	Not Available	554	Open in IMG/M
Ga0127439_132697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	649	Open in IMG/M
Ga0127439_133411	Not Available	539	Open in IMG/M
Ga0127439_134105	Not Available	503	Open in IMG/M
Ga0127439_134190	Not Available	528	Open in IMG/M
Ga0127439_135342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	1337	Open in IMG/M
Ga0127439_135964	Not Available	522	Open in IMG/M
Ga0127439_136088	Not Available	628	Open in IMG/M
Ga0127439_137785	Not Available	519	Open in IMG/M
Ga0127439_137962	Not Available	728	Open in IMG/M
Ga0127439_139217	Not Available	752	Open in IMG/M
Ga0127439_139521	Not Available	645	Open in IMG/M
Ga0127439_141207	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
Ga0127439_141310	Not Available	943	Open in IMG/M
Ga0127439_142759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
Ga0127439_142954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	551	Open in IMG/M
Ga0127439_143356	Not Available	548	Open in IMG/M
Ga0127439_143920	Not Available	682	Open in IMG/M
Ga0127439_144150	Not Available	843	Open in IMG/M
Ga0127439_144347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	636	Open in IMG/M
Ga0127439_144379	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Leadbetterella → Leadbetterella byssophila	539	Open in IMG/M
Ga0127439_144856	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa	565	Open in IMG/M
Ga0127439_145236	Not Available	742	Open in IMG/M
Ga0127439_146089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	551	Open in IMG/M
Ga0127439_146847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	581	Open in IMG/M
Ga0127439_146854	Not Available	564	Open in IMG/M
Ga0127439_147766	Not Available	568	Open in IMG/M
Ga0127439_148993	Not Available	505	Open in IMG/M
Ga0127439_149094	Not Available	702	Open in IMG/M
Ga0127439_149543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	712	Open in IMG/M
Ga0127439_149807	Not Available	588	Open in IMG/M
Ga0127439_150559	All Organisms → cellular organisms → Archaea	560	Open in IMG/M
Ga0127439_152545	Not Available	797	Open in IMG/M
Ga0127439_152753	Not Available	557	Open in IMG/M
Ga0127439_155001	Not Available	526	Open in IMG/M
Ga0127439_155690	Not Available	570	Open in IMG/M
Ga0127439_155736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
Ga0127439_157671	Not Available	522	Open in IMG/M
Ga0127439_158141	Not Available	547	Open in IMG/M
Ga0127439_159718	Not Available	501	Open in IMG/M
Ga0127439_161872	Not Available	633	Open in IMG/M
Ga0127439_162427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
Ga0127439_162830	Not Available	555	Open in IMG/M
Ga0127439_163035	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0127439_100066	Ga0127439_1000661	F067356	KELYTWQPLATKVPFTSAKKKETGPAVLEGANGSEISCTVQGEKIGEYGPGNDEVKNVIGEFANCETSGFKCKSEGQTEGKINTFPLKGEPGIVKKELKEEKNVDGNDLVGGLNETGELAAFTCGPVTVKVTGGVVVKAASKGLIKTNKMLNKLEVEFIAEKPGKQVPEKWTPNFSGVSHSGVRKEITEHLFGDIGSGPEPSGQSLITIQKTGTPKVELRQCEKNISCPN*
Ga0127439_101354	Ga0127439_1013542	F045561	LGGLSVRGLESDFRKEDGGSGQEARAGRQPDSRKANPRNGETPETSCGGFIAVKVTGGAGVKASARCVEGVPGGA*
Ga0127439_101415	Ga0127439_1014152	F083035	ARQKGVQLAEMSYIGGKALPDGTSMQFYLVGIRQQTGSSIDYQPYMFTLDRDGKIAKVQ*
Ga0127439_104213	Ga0127439_1042131	F003427	MVKTRSKNHKRVFTRFACWRLQTSVEASLEASLKILPPQGAGRPCYEAESIPLAVENSVGKLAANVRLMPARERERG
Ga0127439_104257	Ga0127439_1042571	F080934	LPLCSPCRDFRPARINALRHASRLTPNRNPLLGTAFHSLEKTARFRATFPRSMFLAYPFGSSSSLSRTRSIKPLIHAYRLAPDRANSTRQTRCSGPSERPRPFFRSPLPFGAFWTLPDQSGGLNTNREVHQIETPDFFRSPLPAVLIEPATDQCSSLATSRLAY
Ga0127439_104778	Ga0127439_1047781	F062778	LPTSLTYFIPLARGFSPWRPDAVMSHRHARHESGSQESPDGIFFAPRRSFCRTTDQRSKARLQTIPNRLRLLETAFHFLPTTTRYRATVERSKFLACSFAALLNFVPDPFGLLLLRCNSVSPSYGEISATSPLPSSQLSSFAWRSNLRSLLGFLGPFRSKRSIQPPCEKLTFVFGPISLRSPSAFLF*
Ga0127439_108394	Ga0127439_1083941	F023352	MRPKPPHAAESGVGKHKARESEAPNNVPSGKSAWRTP
Ga0127439_108750	Ga0127439_1087501	F066797	LNLYQIISSADLGGSSNYSKENNLNDSSILKTEVAKVFMTTEIAHELVDPNPKDYEK*
Ga0127439_109279	Ga0127439_1092791	F055463	MESAQAGPLRASERPLRATGPKQKRVAASLKALIRRLAKTAVGELTDESPALLPAVLSTVHAGGEQGWYSGH
Ga0127439_109843	Ga0127439_1098431	F021803	MSTRELIDELDRCKTALQVVAEMQSDGLATLLDLLIECLDDAIGQVQVHIQQCTCQDLPSDPDTPVPLRRGALTMYKRPQHVLSED*
Ga0127439_109891	Ga0127439_1098911	F015378	VIESEKEKMTETKQIERNMQNIHVQNEHSSYCECIWCLEKDTQHLRTSDLAKREIEQEMTAMLKDLPLSITIKREVDLHSDEYIWQCMGTT
Ga0127439_110761	Ga0127439_1107611	F067356	VKNVIGEFSGNCETSGFKCKSTGQNEGEIFTKKLHGEPGIVKKVLKEEKNEDGNDLRAETGTELAAFTCGPVAVKVTGGVVVAAKSEGKLKTNKMLNKILVEFLAEKPGKQIPEKWTPNGGGISNEKHEEITEHLFGDVGKGPEASGQSLKTVQKSVAKVELRQCEKTITCSN*
Ga0127439_111944	Ga0127439_1119441	F032410	VKAGSLYQNRIVNLRQASNTRTNEDFIIRQVGVLGQLCGTGGVNSLDPTSYACLNYPDFYPVFQGQFAPNSNETGFCVGAISATEGFKVRLERCGSPRTFWVGDLGASITITLPGIHPFLLLYFPLEFAADTSASNPLVMTLNPNSKNPTNLLTIQQENFSGGSVPDRQMF
Ga0127439_112595	Ga0127439_1125951	F055564	MRKEAIWNAVHEVGIHTRAVEDLIESTLIELSALQSKLVEVSNVAGVTYVTLQESFEGVSATINDLVKVRGSMAQCHEVFVETKEKIPGIRTKAWGDPDPCCPKIAEVELQIVA*
Ga0127439_112666	Ga0127439_1126661	F008843	MRRKRRETERQRSIGVRELGHAWARLDCLNSSPSGCVRSPPGKTLKPGFLSHGGVRVASVIFRQDTPCNEQGQGMSGDPKRGPDLTDNHGIAYRQ*
Ga0127439_114027	Ga0127439_1140271	F020585	MINQQDQWFNQLRREESARRTLRYSLYQALEQVERLLESDMMEVPIEMQARLRQIVEAVDSQLAYRMDQSGPSALDIQDIIFEAQDRLIKQVRA*
Ga0127439_114647	Ga0127439_1146471	F015190	MKYKVTFSVTDAYPTVEVEAKDRDEAIKLYHDMWKQGKLTPEGIVKDAQWRVVSHMAANKPKGS*
Ga0127439_117099	Ga0127439_1170992	F024104	VPGPPFGSTTADSRIAPVAAASLPKARCTSTARSGLPRPRSPLPSGIFTSLGIKAFNRVCCLPVRLTNPPDSLSLPAARSNESWDCGSSFQGRYVFAGLLF
Ga0127439_117415	Ga0127439_1174151	F007777	LRGSVVRPVLGVVERKAASRSGLLPVMEADAHQRIDPQLAKTSGGEQRAHVSPDPDATLRPRMPVGEQTARGSL
Ga0127439_118450	Ga0127439_1184501	F020700	MAARLSLHLRFARLCPKTSRGVFSDAAAGIAVTSIRLNFSVLSQTVKSEKVRR
Ga0127439_120268	Ga0127439_1202681	F012439	RFLFVRRSPHLPTGFHPPSSFPPPSESCGLRAALPAWLNLATQPNGRRAPPMGSPSLIATSAGGVHHSAGNPDPAVTFRPRRFSRPRRFAPPPAFAGLFHPAATSRVCPSGVCPSPRSRTGFPRPCHALLPLNATACDQRLRPRLQGVAPRRECGVGRNGLGLDRSAPLVGFSSSGCSPGATWECLHIPSALGLDREEPLAVGPRRLTVARMGLPGFRLPTRSSFLT*
Ga0127439_121599	Ga0127439_1215991	F030355	HAPHRALQSIVPDALPVDSPTGVFTTRGINAFRHAACCYRSGPVARNGLSLVCNGCSLSKPPFQGQRSQPATSRPNRLVALPVRISAPSPLPVRPGKRRLRRVNPVAALPRGANSCSRSLHSPSGLLRPSRSKRSTASAAIRPAFRLRPISSRSPKPVLFLGSASDHRSR
Ga0127439_121607	Ga0127439_1216071	F013305	VKGRFEQPEPVRKSLQAGFRALIRRSTKGAARSKEDSVQRLLTAKLMPCMPAGVELF
Ga0127439_122025	Ga0127439_1220251	F013305	VKGRFEQPEPVRNSLQAGFRALIRRSIKGTAGSEEDFVRRFLAARLMPCMPAGVELSNESLG
Ga0127439_122310	Ga0127439_1223101	F104818	MKKFVILSFVCVLSALMLFACERNQGVQAGYEPGTSGTYQPRPAPPPKGEVQQNEITGELQRIDMGPKTFSIRVDNGMEQTFKFDNDTPVLGLQGKALIRDLIGKEGSEVSVRWQDSDGTKMATRVDVTQVST
Ga0127439_122603	Ga0127439_1226031	F063173	VQRVSPLNSQVAFRSQVSDTVFNIANSSEGFHGPCPDQRVLPGSCALFVPPFSVFIWLILLPQNRQSRPSVLIHSSNRLPSGNCDSLKLETCSSYLTRFGAVSHRSLSLSSLFAFTSDARTSPEELVNSASATEPHDPAFRGAEPTSLTQPLPGHPGLSLKWSTSIC*
Ga0127439_122959	Ga0127439_1229591	F086758	MVPRLSLHGMALATYEPRKAAPTAPTLEAVFGIAPGTQREIIEAPFSQDARSVVLHPNVLATVAHALTPDVVDVHVAQQPTIQTVPLRVTSMTVMVRATPAEEGVLAQVAHTNAPYDLALVQADKNRLLQPLPYAAVLSYGTGDPEKPVGGLQAGDCVAAIVTSRTEKAYDTGHDRLVLGKVLAKVPVATNNLT
Ga0127439_124261	Ga0127439_1242611	F065470	LDVRFAQEKIWRGTSMSKGCDETVGDTVGDNPDPETVLKRYGQAARKGRRERGSGHAETRSLTRRDTGDRCIATLMPKLRLNTC*
Ga0127439_124632	Ga0127439_1246321	F027793	MFELTTGADVLGLQSVSETAQLSRRHHGGGGVRKNVCLITLNGSANGLSILNILNGFGG
Ga0127439_125241	Ga0127439_1252411	F045847	MSHLPGQTLLLEDIAVDTFVHSSFGTMVMTLFHSLFTAPSWETFTSLTCGWALATDRHTITTYLWRTGATTVKHFSRFYIFLGCPLYNQRWHLWGAVIR
Ga0127439_126007	Ga0127439_1260071	F024746	TTDQKIEMLTQQKRLLDLAKEILDISHQLATLAESIMRSQENA*
Ga0127439_126959	Ga0127439_1269591	F047514	LNRSMPESTEAVPRGAGEVDNTGTRSRAGVRVGCNAYSDARSGREFQVEKGRQHIR*
Ga0127439_127074	Ga0127439_1270741	F002557	VLILSSNHLPSGNCDSLRLETCLRYLTRFGTVSHRPSSLSPFFACTDDARTSPEE
Ga0127439_127116	Ga0127439_1271161	F014482	MTRFPAWLSTGMPGMERLQAVAPDDSPLRSPKSGFPGSRLKASWLAACSLLPGTGPLVTAFRSPATAAAFRLPPFRGQSSQPAPSRTPESFPCPVCPKLRCHAPGLLRWRLLLRLGPVTLPLPGPACRIALLPLPFRNFASFGIKAFSNACCLPGPPDESARFPFAPRCPFSKVGLRITVPGPLRFRRLAVP
Ga0127439_127442	Ga0127439_1274421	F023381	MLRTVSKTVGGALALLCLAATLAIADPQTMTCTASDGKGNCTVATGADGKAIVVVGEGVQVGDTVACQDRGYMINCETVNGSMQPYT
Ga0127439_127614	Ga0127439_1276141	F043243	MVVRRADSRCERAKGRCEKPAPDRKYGLADLVALIRDRRKAIAGSQQESVRETCLRSSVPSMPAGSEGCESDHL
Ga0127439_128718	Ga0127439_1287181	F019767	VIGSGGDQGTISREEFLQRLGQLAEKWQAHRGTDLEIRHETGKLLNDHYGPPTTKQTRGAGVLKEFAERVQTTESELSRMRRFAHHFKSVDDLKDKYPEATTWTAVKGLLPRLKPQGEKQKGGSVNGAASPAGRKQARPVQFGRVKQSLEALTSKLRKAREGLTDAERKELLAQFRELVEAVAHCLKMPLSVSQVSEEPAPPAAPKE*
Ga0127439_128800	Ga0127439_1288001	F022652	RVHGTIDRTTRMLSVRSAAKCALSFVCRSPLLLFSLPRVNAANALFGYRTLPEPVSRCGLSLARNDAFTPFRGQCSRPAPSIPHRISSRIRSISSSFAPFGFEADPGRYHRPTPVSRADFRRSRVFRLPPLPLGHFRTLRIKAFCRHPTREARLAELRSPFAPRRDFFRFRSGSMLPVRCVPLDYR
Ga0127439_130790	Ga0127439_1307901	F003911	MTDLKQMERDIQNINGLNEHGSYCECMWCLEGDTQLVQTSDLAKREIEQEMMAMLKDLPLAIAITKQGDLHSDEYTWQCMGITGKADSVVDATREALQSLIKAYAVSQAN
Ga0127439_130804	Ga0127439_1308041	F039900	MEQFLSDQDQEVWSYVLSDYRTETEKDSEADIPVPDRLLPRRKSQELVRMLKLGQMIGLLLWLNRENLITLGGRERLLYLQAKASFEAMEAGLRFARRLTQEEKLRSDFRHQMRDLNRRPQSKHFRQSEARRIGVGYRDKGMLPGSSSGARTAAQKDAYIPSHLVPQILREALRLVIPACLTADEEWVDLSMVAGSFGTQADIGARPLLPPL*
Ga0127439_130822	Ga0127439_1308221	F014631	DRHARPELGIRIGSDVGPLLPAAGLIQPRIVALVFVRSPFR*
Ga0127439_131011	Ga0127439_1310111	F029372	MHLTSANVWCLAVVNTPIGRLIWKMPSRRSSDGAYGEKGFDSLDIGCRPVVSLAAYLGPGWSGLS
Ga0127439_131115	Ga0127439_1311151	F046210	IVANIQMKNLKIEAEKGFRRTLFEPELVDPNLEINFVNDTGAALKSRNVNP*
Ga0127439_131594	Ga0127439_1315942	F001679	TKGVWGMSWRQEAMKGVEDCEKPGGAVKRALIPGCPNYRVLNS*
Ga0127439_131754	Ga0127439_1317541	F019767	QLAEKWRSHHGAGLEIRHETGKLLNDRYGPPSKRQKRGEEVLKQAVELLQTDESELSRMRRFAFSFESVEALKEKYPEATTWTAVKELLPKLKSQGGKPKGKAGNGAASRIGRKQAQPVKFGRVRQSLDALTSKLRKVRQDFSADEKKELLAQFRKLAKVIENCLHIS
Ga0127439_132093	Ga0127439_1320931	F003787	QPCSPPACTVLNIAIEIAGCFAFPLPDNCFHQLPDRCFQTHRSFSRSGPDARNGLSLARNGRSLRSSHSEVNVPGLPLRVQLAASSARSTFQLRYPFPVSPGLGSLIASGPLQFQRLARKPRYSSLHSPLGLLPPAGSKRSTGFTVSRPVS*
Ga0127439_132697	Ga0127439_1326971	F003911	MESEKRRMTELKQLERETQNVNGLNEHSSYCECIWCLEGGRQVVEASELAKRELEQEMATMLRDLPLTVAITMQDDRSSDEYTWKCLGMTGNASSFMDATREALQALIGDFIVTRYN*
Ga0127439_132786	Ga0127439_1327862	F073973	MLRRRRPLLRAAAVGGVAYAAGHHSATKSAEQQYTDAQQSA
Ga0127439_133411	Ga0127439_1334111	F003787	DFQHCSPPACTVLNIAIESAGRFASLLPDNRFSRLPDQCFKTRRNLFSRSGPDARNGLSLARNDCSFRSTRFEVNVPGLLLRFQLAASSARSALLLRCPCWLAPAGAASSLLARCSLHSSYVDRLVQLPLPLRTVTSLRIKASAGLTISRPAFQRRPISLRSPPPVSISSVSAADQRSR
Ga0127439_134105	Ga0127439_1341051	F023381	PRGAHVQPPANSEKHTMLRTVGKTVGGALALLCLASTLVIAQGQTMTCTASDGKGNCTVATGPDGKTIVVVGDGVQVGDKINCQNRGYMISCETVVTK*
Ga0127439_134190	Ga0127439_1341901	F000646	MRMKINQLLLFVILASLTTPFALGKTKAEVRDITGCLSKGDSAHEFLLTGNDGSTWEVRSSRVALAKHVGHTITATGVVSHAKLHNMKEDTKDMAKDTGMKKSDAEHGHMKITAVKMVSD
Ga0127439_135342	Ga0127439_1353421	F068669	EAETKEEAMSKVADMETMGKQWLLLRGVLVRVSSWPMVRELDKPQEQEIFRR*
Ga0127439_135964	Ga0127439_1359642	F048058	MTKKTQLPLTLELAEPKLIAGEVDIQLSSKTSTRQRSNTFNLLGVLSDINADVAVDDVIA
Ga0127439_136088	Ga0127439_1360881	F005001	MHGIEHCRLKRRTIRRSAPRWLVSPTAGSMHPGSPLAAFSPGPVARNGFSLARNDCRLSAATIPGSKLPACYFASLPSSFPCPFDPSAPLPRHPDCAGGGRFTACGPLHFYDPVRLAAPAVSTPLRDSYIPRDQSVQQRLPPAGPPDESARFPLAPRCPFLIKVGAADHRSRSATFPSACCFTATPPAGILGTEHC
Ga0127439_137785	Ga0127439_1377852	F001679	VWGMSRRQEARKGVEDCEKPGGAVKRALRPGCPNHPTLNP*
Ga0127439_137962	Ga0127439_1379621	F012439	RDHRSVFVRRPRHLSMTLHPSASFPPSPESFGLRPASRPCDREAPPMGSMSLIAASASGVHHSAGIPDPAVSFRPRRFSRPRRFAPPETFAGVFHPAATSRVCPSGDCPSPRSRPGFPPACHALLPLSTAACDQRLCPRLQGFAPRGECGADRGGLDLDRSAPLLGFCSSGCSPRAAWRRLHVSSALDLRRDGPTAADHRRFVPARVGLPGFRLPTRSSFVT*
Ga0127439_139217	Ga0127439_1392172	F016975	VSLPGSQAGGATTSPSELKSLTQQFSRREALSGPATRPITPLAVENSVGKL
Ga0127439_139521	Ga0127439_1395211	F000734	VKTLRSVGDAKNGVADLPMKSDLRAKRRDPWLWGNALPKAVAGPWLSGQDAATRVIDVC*
Ga0127439_141207	Ga0127439_1412072	F029372	WYLVVVNTPIGRLTWKMQSRRYSDGAYGEKGCDFLDIGCRPVVSLAAYLGPGWSGLSSTCLIILAHNDQGG*
Ga0127439_141310	Ga0127439_1413101	F016001	VWESAIETTVFSRRLDPIPSWASLLQVFALDAVEAPSRPLPLVALSATLSSHCHRRPSAFRHRAWLASLEAAYLLEVRDLPALLSCPSISDEVRRSASTELPRFPP
Ga0127439_142759	Ga0127439_1427591	F036176	MKRFRIVGLCLAAIFALSAFAATASAETPPEVGRCLKKAGGKWKDGGCKVPSKPAEEKFEWYPAYVGGVPNPEPKLPKLKYTSASKPETIIQLESVSGAVIKATSQSATGEVTGAKTNIAQNIDFKGVEFKGFKCTSTKPAGVGEGDVKVNDLNGNLGIEKKGETTAKDKAANRFVPKSGNIFTEFSCNVIPIIVRGAVLNPLTSNAMKGFPTPVTVKFTGANGKQKPSKFVGGPEETLESSIENGPFEKSDQVLTTLQKNEEKLEVSTVN*
Ga0127439_142954	Ga0127439_1429541	F002020	ALLSTGMHGMEHCEPKRRAFRLSAPRWLSFSCRRINASWLAAAVSGSGPVARNGFSLARNSCRLLAASIPGSKLPACYFASFQMASVPVRPFGSTTASRIAPVAAASWPGTRCTSTTWFSLPRPQSPLPSGIFASLGIKAFNRVCCQPVRLTNPPDFPSLPAARPD*
Ga0127439_143356	Ga0127439_1433561	F079670	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILY*
Ga0127439_143920	Ga0127439_1439201	F104888	MLLGAALLSASLLARSLVAPATHAAIGGCNSDPVVTLSNGDVLDLHATVTDTYDDVDQVSYTLYVPNGVWVTSEVDTSLLGGKDAFQYNNTKNQAPNTYSVSVQVNTGASQIAVVAATDLVNVNGTLVSTARVSGQSQ
Ga0127439_144150	Ga0127439_1441502	F060086	VEEESFEHDSKLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD*
Ga0127439_144347	Ga0127439_1443472	F019453	MKYFKITRSWVVKAEDEAEAFKLVASDQSKYLDSETVTRTEYKKPQQKTGWGQTLKDQVLGSNGQKSR*
Ga0127439_144379	Ga0127439_1443791	F000611	QTNMNFPTYVFATVNSGRATKVVEELKRNSQIDIIAPVTGRWDLVLRLKPNTPHNIYQTVKEIREISDVRTTDTHTGFDGMQPTKKLESQMALGVSVLTCEHNTSENVIKQLSNIPGFIEASTVPGQFDIVALWQARTSEEIMKTSVERVTNLPGVFKSETLLAYAPFFKA*
Ga0127439_144856	Ga0127439_1448561	F016972	FNLYLKIYGNDRFPFGAKTSRYGPYELGYRRATKTFTK*
Ga0127439_145236	Ga0127439_1452361	F044534	VPPSPPDGDSRMRGIYHQFLWPESCPVSSHTNQELSGEARLETAPSRVRPTGRFDPCADAVTPEGFGCYCADQNAVAIPGGTTPPKGSTRRTSGARNGIAAAGSERT*
Ga0127439_146089	Ga0127439_1460891	F002020	ALLSTGMHGMEHCEPKRRAFRLSAPRWLSFSCRRINASWLAAAASNSEPVARNGFSLARNSYRLSAVSIPGSKLPACYFASFQMASVPVRPFGSTTASRIAPVAAASLPQARCTSTTWFGLPRPQSPLPSGIFASLGIKAFNCVCCQPVRLTNPPDFPSLPAARPD*
Ga0127439_146847	Ga0127439_1468471	F001941	MERNFAMNESQSSQSLESQSSESLINTWAETQQKLLTNWLESMRSFAGTPSPELWTKTMEAWQASVKETLDAQAAWTREWTEALANAKGTPEELQHLARQGRELLQRWTEAERQIWQGWFDIVKDINFKVDPAAITQGGRDLIQLWQESTHKMIDAQAALARQWASAFTKTDR*
Ga0127439_146854	Ga0127439_1468541	F057921	QAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0127439_147766	Ga0127439_1477661	F055463	LTPEWIPRKRDPLRASERPLRATGPDRKCVAASLEALIRRLAKTAVGEPKGECPALLIAVLSTVHAGGEQGWFSGH
Ga0127439_148993	Ga0127439_1489931	F055463	LTPEWNPRKREPLRASERPLRATGPEQKCVAASLKALIRRLVKTAVGEQTDESPALLFAVLSTVHA
Ga0127439_149094	Ga0127439_1490942	F019691	MTGFLHEREFSRKTFVKGGGALIVGFSLAGISVKAAEGAD
Ga0127439_149543	Ga0127439_1495431	F033437	MRMFRSHGGTVLTVAGRDLLSEASAPSSVTPCREWHAGRGADTSAILLRVGTVTAGTAPAFGRSLAPRYGSDLLTLRLLSLLQCGGVVFTLPH*
Ga0127439_149807	Ga0127439_1498071	F032287	VGPRKDPQDTERPAERQAARFEQEKIWRGTSMSKGCDETAGNTSDDNPDPETPSRRRGQAARKGGRERGRAHEETRAPIRRETGDGR
Ga0127439_150559	Ga0127439_1505591	F000611	KKTTMQTNMNFPTYVFATVNPGRSTKVVDELKRNSQIDIIAPVTGRWDLVLRLKPNTPHNIYQTVKEIREISDVRTTDTHTGFDGMQPSKKLESQMALGFSLLNVQHTSVENTIKQLSNIPGFIEACTVPGQFDIVALWQARTSEDIVKNSFEKVTNLQGLFSSETLLAHLPYFNA*
Ga0127439_152545	Ga0127439_1525451	F001346	VKTFQNAGDVKNGTAGLRTKSNLRVKRRDPWHRANALLKAAADLVLNGKDADKNSQTCLDLVRKPVAQPPAEAS*
Ga0127439_152753	Ga0127439_1527531	F015442	VSGQSLRASERSLRETGSGQVVRAGGLGSVNPQSSKDGSGESTRIRPGILFAMLSAECAGGGQGCESDHL
Ga0127439_153883	Ga0127439_1538831	F021064	LPINTKNAILLKGLNCIPLNLDKSVNGINNKIKRAENIAITPNNLLGIDLNIA*
Ga0127439_155001	Ga0127439_1550011	F032547	AIQVFVRLASLLPAAAFRPHRISARRHAGRLTPDRNLLLGTAFHSFDKTARFRATFSISMLLAYPFGSPPSLRRTRSTLPLVHAAWFAPGRANSTRQTRCPVPSERPRSFSTPALPFGAFGPFPIKALTWIPIERFTESARPIALRSPLPAVLIEPATDQRSRLATSRSAYWLIN
Ga0127439_155690	Ga0127439_1556901	F052413	MHGIEHCDQDCRTLRLSAPRVPFSGSSDQCLLTRRSLCSCSGPDARNGLSLARNGCLFQGLHSGVNVPGLLLRFQTCRVYCPFGLWALLPIPVSPGTGSVLASGPLQLPQLVRLTPPPASTPLEDFYVPPDQSVQLDLLSVGPPSESARFPFAPRSRFLLLVFQLRIIVPDPLRFRRLAV
Ga0127439_155736	Ga0127439_1557361	F060670	MDTTQPLVKWARQMADTIEHKARVKEQRHQSQSALLTQAQAEHLWVQGMDQVVQTLDVLVQALKYTGQFPQLTLLSHARSPQGTTTYMRRGTLLTLKGLERESPSVEFEIDPAPPFRSDLLAPTVRVITKPDTHQLMGARQEHFCCGVSLQGTVVWQLVNPALEIPPEGSVEEMLRSFLASLLLTPTE*
Ga0127439_157671	Ga0127439_1576711	F032386	MREIDELYADSGEPVKESRGVSRGTALKVGGLGLAGALAAFMPGRAGASVRKKASNASCGGTGFQCIGSNKAKTCGYDPYAIYNICYCGTVYYGKLRPKGAPIGACVENGYCFAAAPCTKQKDCGPGYVCSSESCCGPPICLHYCEQGSQGQGPVLNTPHTATHK*
Ga0127439_158141	Ga0127439_1581411	F052033	MTQQCPPHTWSATALKDERGKAIFACFKCGTYITVDCKYLTKADVQKCAATQDAAA*
Ga0127439_159718	Ga0127439_1597181	F058488	DAPGREVPDVTNIYSDALSDLSWALRLGVSSLPSTDCLGISVPAAEPFAARVDALPRVRGKVAVLVPQPQKVVVGQTNIHNYMTGVFATGGGASGPPRDRGPV*
Ga0127439_161872	Ga0127439_1618721	F012589	MERSHPINGEKEADMKRLLTLVLALGIAALFSSTTLAGADCSYHKTQASVGTTDASKNVATTADNAGDSQVKTAQTEQ
Ga0127439_162427	Ga0127439_1624271	F067356	KKKETGPAVLEGSSGSEISCTIQKQNKEGEYGPGGDEVKNVIGEFANCETSGFKCKSEGQTEGKINTFKLHGEPGIVKKELKEEKNVDGNDLRGQTGPELAAFTCGPVTVKVTGGVVVKAASKGIIKTNKMLNKLEVEFIAEKPGKQVPEFWTPNGSGVSNSKHEEINEHLFGDIGKGP
Ga0127439_162830	Ga0127439_1628301	F011643	HGSAARDKSLKGKPWTWRRDETSPRRQLAEETVEDVRNVEDGT*
Ga0127439_163035	Ga0127439_1630352	F037647	TGSTTGGCAVADTIEDKIEQNESKITYENYLIWLRSYELKSGGWVPRALVVVPSEEGNGEQELIEPGASTVSTREDADTQAFAIAKHWIDERLAGRRQDRTLPRS*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300010074: Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences