Sample 3300001565

3300001565: Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new

Overview

Basic Information
IMG/M Taxon OID	3300001565 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0083722 \| Gp0055864 \| Ga0012987
Sample Name	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new
Sequencing Status	Permanent Draft
Sequencing Center	University of Tennessee
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	113173426
Sequencing Scaffolds	84
Novel Protein Genes	93
Associated Families	93

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14
All Organisms → cellular organisms → Bacteria	25
Not Available	14
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. OGB3	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2
All Organisms → cellular organisms → Bacteria → Acidobacteria	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Permafrost And Active Layer Microbial Communities From Mcgill Arctic Research Station (Mars)
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost → Permafrost And Active Layer Microbial Communities From Mcgill Arctic Research Station (Mars)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → active permafrost layer → permafrost
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Axel Heiberg Island, Nunavut, Canada
Coordinates	Lat. (^o)	79.26	Long. (^o)	-90.46	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000065	Metagenome / Metatranscriptome	2788	Y
F000168	Metagenome / Metatranscriptome	1799	Y
F000828	Metagenome / Metatranscriptome	872	Y
F001959	Metagenome / Metatranscriptome	611	Y
F001986	Metagenome / Metatranscriptome	608	Y
F001995	Metagenome / Metatranscriptome	607	Y
F002189	Metagenome / Metatranscriptome	585	Y
F002316	Metagenome / Metatranscriptome	572	Y
F003244	Metagenome / Metatranscriptome	498	Y
F003319	Metagenome / Metatranscriptome	494	Y
F003882	Metagenome / Metatranscriptome	464	Y
F004294	Metagenome / Metatranscriptome	445	Y
F004400	Metagenome / Metatranscriptome	440	Y
F004677	Metagenome / Metatranscriptome	428	Y
F005004	Metagenome / Metatranscriptome	415	Y
F005510	Metagenome / Metatranscriptome	398	Y
F005657	Metagenome / Metatranscriptome	394	Y
F006205	Metagenome / Metatranscriptome	379	Y
F006674	Metagenome / Metatranscriptome	367	Y
F007654	Metagenome / Metatranscriptome	347	Y
F007883	Metagenome / Metatranscriptome	343	Y
F008276	Metagenome / Metatranscriptome	336	N
F010459	Metagenome / Metatranscriptome	303	Y
F011357	Metagenome	292	Y
F013962	Metagenome / Metatranscriptome	267	Y
F015243	Metagenome / Metatranscriptome	256	Y
F015625	Metagenome / Metatranscriptome	253	Y
F016888	Metagenome / Metatranscriptome	244	Y
F017686	Metagenome / Metatranscriptome	239	Y
F017923	Metagenome / Metatranscriptome	238	Y
F018821	Metagenome	233	Y
F019010	Metagenome / Metatranscriptome	232	Y
F019257	Metagenome / Metatranscriptome	231	Y
F019971	Metagenome / Metatranscriptome	226	Y
F021632	Metagenome	218	Y
F021889	Metagenome	217	Y
F023252	Metagenome	211	Y
F025106	Metagenome / Metatranscriptome	203	Y
F025885	Metagenome	200	Y
F026129	Metagenome / Metatranscriptome	199	Y
F026365	Metagenome / Metatranscriptome	198	Y
F026661	Metagenome / Metatranscriptome	197	Y
F026952	Metagenome	196	Y
F027633	Metagenome / Metatranscriptome	194	Y
F028503	Metagenome / Metatranscriptome	191	Y
F029941	Metagenome / Metatranscriptome	187	Y
F034514	Metagenome	174	Y
F036618	Metagenome / Metatranscriptome	169	Y
F038340	Metagenome / Metatranscriptome	166	N
F038660	Metagenome / Metatranscriptome	165	Y
F039372	Metagenome / Metatranscriptome	164	Y
F040275	Metagenome / Metatranscriptome	162	N
F040687	Metagenome / Metatranscriptome	161	Y
F040827	Metagenome	161	Y
F042596	Metagenome	158	Y
F044817	Metagenome	154	Y
F049311	Metagenome	147	Y
F049753	Metagenome / Metatranscriptome	146	Y
F049886	Metagenome / Metatranscriptome	146	Y
F050778	Metagenome	145	Y
F052497	Metagenome	142	Y
F055886	Metagenome / Metatranscriptome	138	Y
F059040	Metagenome / Metatranscriptome	134	Y
F059374	Metagenome	134	Y
F060228	Metagenome / Metatranscriptome	133	Y
F060367	Metagenome / Metatranscriptome	133	Y
F061990	Metagenome / Metatranscriptome	131	Y
F063028	Metagenome / Metatranscriptome	130	Y
F064674	Metagenome / Metatranscriptome	128	Y
F064918	Metagenome / Metatranscriptome	128	Y
F067236	Metagenome	126	Y
F067652	Metagenome / Metatranscriptome	125	Y
F070295	Metagenome / Metatranscriptome	123	Y
F070409	Metagenome / Metatranscriptome	123	N
F070692	Metagenome	123	Y
F071579	Metagenome	122	Y
F072036	Metagenome / Metatranscriptome	121	Y
F072232	Metagenome / Metatranscriptome	121	N
F072882	Metagenome / Metatranscriptome	121	Y
F077732	Metagenome	117	N
F083815	Metagenome / Metatranscriptome	112	N
F087955	Metagenome / Metatranscriptome	110	N
F089269	Metagenome / Metatranscriptome	109	Y
F089563	Metagenome / Metatranscriptome	109	Y
F090708	Metagenome / Metatranscriptome	108	N
F091045	Metagenome	108	Y
F092943	Metagenome	107	Y
F095432	Metagenome / Metatranscriptome	105	Y
F095997	Metagenome	105	Y
F096276	Metagenome / Metatranscriptome	105	Y
F097916	Metagenome / Metatranscriptome	104	Y
F100511	Metagenome / Metatranscriptome	102	N
F102158	Metagenome / Metatranscriptome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
A35518A_1000180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1031	Open in IMG/M
A35518A_1001625	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
A35518A_1001887	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
A35518A_1003844	Not Available	515	Open in IMG/M
A35518A_1007901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1164	Open in IMG/M
A35518A_1011379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. OGB3	654	Open in IMG/M
A35518A_1016291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1479	Open in IMG/M
A35518A_1019251	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
A35518A_1024765	Not Available	673	Open in IMG/M
A35518A_1025207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1150	Open in IMG/M
A35518A_1025586	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
A35518A_1028596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
A35518A_1030474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
A35518A_1030975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
A35518A_1035516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1024	Open in IMG/M
A35518A_1035986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
A35518A_1036801	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
A35518A_1036866	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
A35518A_1038773	Not Available	527	Open in IMG/M
A35518A_1039444	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
A35518A_1042693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1198	Open in IMG/M
A35518A_1043285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
A35518A_1045153	Not Available	506	Open in IMG/M
A35518A_1046094	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
A35518A_1047300	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
A35518A_1049138	Not Available	1057	Open in IMG/M
A35518A_1049491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1960	Open in IMG/M
A35518A_1050699	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
A35518A_1053712	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
A35518A_1057012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	641	Open in IMG/M
A35518A_1060930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	636	Open in IMG/M
A35518A_1062449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	814	Open in IMG/M
A35518A_1066767	Not Available	523	Open in IMG/M
A35518A_1066849	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
A35518A_1067088	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
A35518A_1067107	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
A35518A_1068016	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
A35518A_1070049	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
A35518A_1071168	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
A35518A_1073087	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
A35518A_1075921	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
A35518A_1076153	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
A35518A_1080508	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
A35518A_1088005	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
A35518A_1088165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	690	Open in IMG/M
A35518A_1090771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1517	Open in IMG/M
A35518A_1092170	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
A35518A_1092462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
A35518A_1094195	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
A35518A_1095455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	965	Open in IMG/M
A35518A_1096627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	519	Open in IMG/M
A35518A_1098812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
A35518A_1104684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	529	Open in IMG/M
A35518A_1106894	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
A35518A_1110365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
A35518A_1111711	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
A35518A_1114050	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
A35518A_1122913	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
A35518A_1125017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
A35518A_1127964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
A35518A_1129829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
A35518A_1130350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
A35518A_1133485	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
A35518A_1138329	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
A35518A_1140273	Not Available	569	Open in IMG/M
A35518A_1147383	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
A35518A_1148855	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
A35518A_1154719	Not Available	502	Open in IMG/M
A35518A_1177504	Not Available	561	Open in IMG/M
A35518A_1178853	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
A35518A_1184166	Not Available	524	Open in IMG/M
A35518A_1184267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1505	Open in IMG/M
A35518A_1185145	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	525	Open in IMG/M
A35518A_1193157	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
A35518A_1202837	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
A35518A_1214177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
A35518A_1238613	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
A35518A_1258986	Not Available	531	Open in IMG/M
A35518A_1264856	Not Available	553	Open in IMG/M
A35518A_1297730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
A35518A_1326011	Not Available	579	Open in IMG/M
A35518A_1334747	Not Available	545	Open in IMG/M
A35518A_1340793	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
A35518A_1398171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
A35518A_1000180	A35518A_10001802	F011357	VRFSIQASKFRHSIPRAWKQVPLLYPAKIAGSITVSALNVLWTGHGVLRSSPTPVRLAAVAITCYVVATIAEFLWLIYHGPRFTGFESPTAAKGATNPPAADPLVEQLKELAPAELREEVLQLAKEMKSFEAVSDREFVKTLAGVPPLEVASEEERDEVLDQQSAELMEHDLRTWRAYRERFYRPARAFRDELRKRLGIRNVQREPKIPALDQAQLTGARPIAQAADYLAALARRLK*
A35518A_1001625	A35518A_10016251	F102158	MSPANTQAALAALNGARPVLAHFNTPRSAEDLAADIIDLWTGV
A35518A_1001887	A35518A_10018871	F050778	PRLHRAVPMTCEECLSELATGSLRDLPSDSAVMRHCVTCPDCSRLTTLLRDREYEAATVLNNLPPMSNPLTVAEMSVHTAQRRRVGRVVVMISGAALAITIWIAAATTIFPRLNPLDHRVDSSALRTETIPLTCLSPRQAGEIINPYVRSPGSSYYISTSGISVISVRGTADEVAKSRNLIQEFEKDPAAACRNGPADVFKRLQQQLIEANGGGSAP
A35518A_1003844	A35518A_10038441	F049753	MLRSVLTPAAYEHFAMPVSFYILTSTVGVGYFVVTAGYSLLNSWRARYREAMSERREPTEGKSPVPVANFTLIIGAVFDFFAGRLWWWFAPALSILSILVGLVIYTREAVIAVTPFIY
A35518A_1007820	A35518A_10078201	F000065	MAHITNNPIPKLDKALQPPLSYRGATPDSDRAKRPPLAVGPSTDEELNPGDRVMGVEKSGKPTWDFGTVEQANEDDAVVKWD
A35518A_1007901	A35518A_10079012	F091045	QARFAIVSRDGQAALLLMDTTIVAQMTDRGIARINARQTTDTIQGAVNRMVARMALGALVPLFDHGIAYHLRDLADAKYADGRLQLLRANGDEVFHDVEIGKGPLMESFSADDAKAFAARARAARAQLRH*
A35518A_1011379	A35518A_10113791	F039372	MRVNHGIEPIKSPPGTDRDGSRPKPPKAVAQRASLEASWSVPDHRKAK
A35518A_1016291	A35518A_10162912	F015243	MKKSLRERLFGPRDVRDSNAAALKKESVLAKINEPDPAAKPRARRTVGLTEARLRAANQQSWMTSGKGWSDFLGRFTRPSRS*
A35518A_1019251	A35518A_10192511	F064674	RPAGQSKAVSQPTPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAANRISDGDEGSIAASKPRSRSKEQD*
A35518A_1024765	A35518A_10247652	F089563	MAVLQHQRARKSVYERGVVACEKCAAPIYVYKYKLLPDEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD*
A35518A_1025207	A35518A_10252071	F005657	MADFTKEWIEHLKTQISGRMSVVEEKMDPQAYDELVTDLAWFAFRFARDPDTKMRKVFR*
A35518A_1025207	A35518A_10252073	F003244	VKWKNRGDPKGKLGDERVRTKFAWFPVETDDGFTYWLAPVVVREQLLPKVTRGGFEDDEQAWHVVEAKPLKNSGKKSRKK*
A35518A_1025586	A35518A_10255861	F036618	KVPSVNGAPITGQVLLKDGDKIAVSGVRLHFIFRD*
A35518A_1028596	A35518A_10285961	F072036	VSELEHDMRATAESIAADAARLTGIEEEKADLEADDPRLVELSVESDRLARRIVPKTAAERELAEQLAEESGSSG*
A35518A_1030474	A35518A_10304742	F063028	WAIKSDQMIDSAGVKFPAYFVSADIIAPTGEAVPGVWITTEITKPGLIYSLSPQAQKYTTWAKAGDASTAGFTMESPGAKESAACVLNNRPGGSATGTTPKTTTP*
A35518A_1030975	A35518A_10309751	F095997	RKIRDAGWGNFVVGGPEGMLTVDAIGLDGQPVTRIGARLRVEDSTVATLDSSGRLRPLRPGQTWIDIEIGDRREGALVTVYEPVRTFEGLRPDQRWLVAPIRLARGASIRWPLPTGVFFLTFSPDSSEVPPTRGFMGLGSGSSPTVQSPVNMTVAGQIMCTRMGESQPDALGAYCLARAPGATLILTYSGPGGPNEIVGSLALERQDQH*
A35518A_1035516	A35518A_10355162	F092943	LIKRYLAPADFTAEESWRLVEWCREIGADEFTVDCVGSDARAEATTRQPFEKIVNPFSRGEETRERMSGATADDLTRSTRLWEMNPVTVGALRQALPNGLLSYDPEGSGWFEDPILYREGNLLLGVLSHEAFAVLRLSVVESMRLTA
A35518A_1035986	A35518A_10359862	F038660	TTAFQRQVWKLHAVIDRYRIASNGELVLILFSIPSGQYMDVYLPNPVCLGERARDRSGMIAARDQFAAHCDSVTAAWQLLGTTVDVAGVGFWNPSKRTRGALQNGAELRPVTNLRVVSGCGV*
A35518A_1036801	A35518A_10368013	F008276	KASSYMVRLDDLVACYKCRKRFELTGQSTVLINDTLGDPNADPENFGNR*
A35518A_1036866	A35518A_10368661	F067236	ADPTQPGTITLTGANTNAVYVFIYEYDPTGASPTRWSCPSCAAASGSAVRTQGHQRVVVDLKLRWRPVLATFLGIPTAIIFDAQTVSRIEF*
A35518A_1038773	A35518A_10387732	F026365	VRRLIVSIYAFALMLALPATAFAASAAAATTDNTGKPSGHDWTITSIFVIALFIPALLGSLTLIDIARGKHTQRDH*
A35518A_1039444	A35518A_10394442	F061990	PSQEQRSERSDGSGAQNSSALLAKATRTGDRYRLHIEESDLYPALEQLRAAGAKILSVTQVKPSLEEYFMHLVAADRAQASAVEVHAK*
A35518A_1042693	A35518A_10426932	F025885	MTDNRRGQTSSSWLGLVLRDIQFWVPVAVLVGGLLVLRWISS*
A35518A_1043285	A35518A_10432851	F055886	MKKLAALTLSLFLTSGVAFADAPKDSDAQPANNAQPAKAKESR
A35518A_1045153	A35518A_10451531	F000828	MPTLNEQYRVVFVESDRLLARGILSGDMLTIINTEPETPFTQKDFPPGNFISLTDQGPITR*
A35518A_1046094	A35518A_10460941	F013962	TTNSGGRYQLLIDGAIDDTLVFDHPRLRLLHVAERWQPISFPSGTKGQASVIVPSYATLRKRICGQNETGTEPQGFMAGYVRDASGKPVPRAHVWATWQILWVEQNGRLVATNQQRVVETDTGNDGSFMMCGFTRGAQITAKVGIAGRNTVQEKLAFPPIMVLEHDFVLGAR*
A35518A_1047300	A35518A_10473002	F001995	MLKEGVWAETKVGGECLRLFSEHSAQGVLASVYNVNAKTWVAPSEPVDDIQHGKEIAEAHARTY
A35518A_1049138	A35518A_10491382	F015625	MLKKGLGAATGVVLLLCAVFTLEYGRAQEGSPLRGLRVKVHYKGSGTVDEKHKILVFLFDSPEFGHSNVMPFAVMTTSSKDGTVTFSDVAKSPAYVGSVYEPSGTYAERQGPPPSGSSLGMYSKTPGQPVPVKVEAGKTANVEFTFDDTVKMP*
A35518A_1049491	A35518A_10494915	F023252	MIALFLAMQIAGSAATAAAPTFIVVRDGQTTTSVPVTISDGQAFVRADLLAKAMKGTLIYGTNLHYTLALPRAHVALIDGIPFAKFDSVTVPLTRAPQVRGGQLYLPFQFVSE
A35518A_1050699	A35518A_10506993	F006674	MKRKLLVAIPLLCLVALLAWFVRPKHETYGEGFISERSVTLWSGVAQVREP
A35518A_1053712	A35518A_10537122	F049311	TWEAVNRMAGGLGSTMTFAADNTLSYTLGAMVDMQYKRSRDSLYIIDPQNGINAFRVSINRDTLVMTNDGHELRETRVGAPVSGADPVVGRWTYQHYTGVPAFEEYTPGGEFRLRVPIRTLQGTYAVLGDSAMLHLPGPGGGDRAVQFTVVGDTLQLNWSDQTARYVKAAPLGTGHR*
A35518A_1057012	A35518A_10570121	F044817	VTIPNIVRFITVASAIALSFAACREVAPAFGPNIPGARQNAEEFFYSVGSRFTNIQRPPRILHARAQFGHYALTPSGIYNDTSVWLAIGPDSARLFGDEGVFSVDRYIVTAKLSTTPPDALSE
A35518A_1060930	A35518A_10609303	F019257	VRLASRGLRDLDGGPQPILDAEEKAQIQRQARAVYVLSLIHISEPTRLR
A35518A_1062449	A35518A_10624491	F060228	MIAKPISIKDAKRKFGGCARKAIELISGDLLHVSDSRLRVE*
A35518A_1066767	A35518A_10667672	F017923	MTRTILVGFFLSLYILVVGPPLLLYTLLSRDPDPLYRAGIGGVIFFVRAAGVR
A35518A_1066849	A35518A_10668491	F004677	SLQEIPVTRYKTQPPWDFLLSASRASLQSYELTRLSHAANLRKEIAVLLDQWLDESSSAMLARWLIENRERCAKRADGDLSAALPSPAAPSASDNFFADQAFPSSVPGGPS*
A35518A_1067088	A35518A_10670881	F072232	MEPLIVALVAVGALVVLMFVLLHVGVRTWRALAPATRERIRRRRDVRRGIREIEAFLAGPGAEPWSDEHTGPTEGRPGQDAD*
A35518A_1067107	A35518A_10671072	F001959	MKNLDSIFAAYLIAWGIFFAYYVSVARRAAALQQDLERLRNSLQREK*
A35518A_1068016	A35518A_10680162	F064918	ALHSMKTLTQLQQNRRIIQDFTMNTLAGMPSLYSRLIYVASLRDLSNGKYEHAGLLALYPEAAIQQALETCHEQVFEKILEMPLAEQEEDLRTCLEAMQGGAEDTVGHWQRMEAYRVLLPEHAPDYLKNLFCSNLRALLEIFPQARSKARLTS*
A35518A_1068156	A35518A_10681561	F052497	GDHLALNGVVHANDIKLGTRSVESVRGTVLLADITKQASGSLIFAADTVALGPVGFNSIRASVALASPTSGHFTGSMLSQSGVQTDLSGNLTRSKDTTVLRLDSAAVLVDADNRYRLQSPSRVVFSTGFLALDSLTLQHSSKAKLVIENVQLKGDSIRGHIRTDSVDLRLFRAFVPGLVEARGAIVADVDIRGDVKQPRMFGQISLTDGTTGFSSLGTRFVHIKADISLADDTVHIKQLSAETI
A35518A_1070049	A35518A_10700492	F070409	MDWSKVSRSQWMVIGGTAVTLISTLFLAWYSFSLGPLGSIDFNAWDVNFIGKLAVLGSLVMLAGVVLLFVPNGPALPVPLPMAILLASAFTALMVVFEFIDHHSHTSIGLWLTLIASLVTAYGAYEMGGRFEM
A35518A_1071168	A35518A_10711683	F026952	MPETSAYSHIAYTVALGIYAAYALSLYVRRKRLRAN*
A35518A_1073087	A35518A_10730871	F019010	RLSLVGSEMCIRDRSQVELLEAKQEKSNSAAKSAEQLRRDQERKDLQLSRVRIMNDLNSATHPQHRKSLEAALAHLDKKISEVG*
A35518A_1075921	A35518A_10759212	F096276	MPRSGQVEFVIRFRGGNFESWKAAFDKHEPQRLRHGAVGHWIARSIDDPNEFIGVVEFTSVGGARGYARDADRLDLHEALMLEGGPHQKTWEEGINETVDRVTYST*
A35518A_1076153	A35518A_10761532	F002189	LSLVGSEMCIRDRLYSMRSGKGLVEVRFSGNDSFDLTAQTATGTVDNQAAEYLKPDSHGVKHMASKFSKSLFGTVGTGFAKVELSSYSGTIRILKRD*
A35518A_1080508	A35518A_10805082	F002316	VCSKCGAPYESVIGVLYEDEDAIAIYRADIFDRFHRDPEPRVVLSIAVGEWQDGADRSDRCSAAIEAWAEGPRVRMAFSDRGGSPWQDLEVVSWQLTSKEAEASPLREAFLRLAGHVARKDRRLRRALKTGTTTPPDM*
A35518A_1088005	A35518A_10880052	F077732	MAFKVVTKQDSRYLQERSGAFRPIENLSITASTPAYPAVLHRTRRTMILADDHTHAVIPLDKEMLVSRNDELSCILIA
A35518A_1088165	A35518A_10881652	F040827	METTLKSMENSLAVKILRGSFFLVLALIASYLPRVLGLPGAQDMANLASTLALFMQGVIWANIIIGYYIQRYVSSHAADGSSVTTFKALGVVARLTVWIILGVVAMGSRGIQIRPL
A35518A_1089865	A35518A_10898651	F034514	NLVKAAGNAWWKGAALTMPRLPNLTEGAGFRSTFLGTAVTTRADNVAVDGIEAVNLSGPRADVFIAAKPPHQLLRLRMKNGASVDGVSGADFRYGNFDKDFKIARPTDVIDFSNLSTLPPIYTVVSVDTSRCNATCVVSAVVKNLGGKVGAQAPSTITFTMTDSASKKVAGTCQVDVKPDVGYN
A35518A_1090771	A35518A_10907714	F089269	RLSLVGSEMCIRDRCNSGYDYLTFAASHEFAEATTDNVPTPLVNPDYPQAWNDSTGYEIGDKCSGSGTLTSLAGSWEVTQYYLNSLHGCSVQTTYTSP*
A35518A_1092170	A35518A_10921702	F025106	LGSIPHYAWSRDGKKLAITRARYNDSDVVIFSGFK*
A35518A_1092462	A35518A_10924622	F018821	MPIEAERAKCFLRTFVDGKKLDRVAIRELYLSGYLGIELPAIGREPVPTTITEKGKMVLEGQTVRRHFVVRSAR*
A35518A_1094195	A35518A_10941951	F010459	MSAPGNALGSGSLDLPPFSLDVEVLNLGSEVKAVGLELLETENREPVRGAQAAQIWSATL
A35518A_1095455	A35518A_10954552	F003319	VKEKRALAYFAGVSGALIIIATIILRMYFRTVNDHKAMLVSAGLAFAVQLGSYALLRPKRSGHGVPGELLVRWAYGSVMRLIVLVLYAPIARIANASLDAALVSLVTFFFLTMMAEPLLLEYDR*
A35518A_1096627	A35518A_10966271	F019971	VRSSRVTADVRAFFTSYCTAFIRQDAPAIARHFADIVHVATDVGDDVNVHVENGAEWRSTIDRILEMYRTVDVGSVVATGLATDPLSSRLVQARVRWALSDKAARPLYEFDAMYTLARHTETFRITAIAHNEIPEYRRCLATLEAGKGSKAGTRKA*
A35518A_1098812	A35518A_10988121	F083815	MFSRPPIREHPRSHLLQDSSVRIGLLIGAGLAAALSGWVYLANRVPIFDRVSVERNIAAAAILGFLAFMPVMRFFREPGNLLVSSLIAWSMLTLTYRALSMFFWALRDWYSTFEIFMLGAVIYLIA
A35518A_1104684	A35518A_11046842	F072882	LALVSSVLAAQAAGTLKEAGHGAGSRIELMIYGDAAPSIVSDIERLASRVGVAVEQHGPNVILTVLREGKSHSKD*
A35518A_1106894	A35518A_11068941	F059040	MANEDSPQAGGRPEWHGGNAPGLAGVYGRLRITVAGKPFATLAVEGTYVVLIPDTSGPADATLLCADEEIMRKLLKGDLNPYVASMRRQARLAGDRGFGTRVMLGLQVGSPFAADADKGALS*
A35518A_1110365	A35518A_11103651	F021889	RADSGIFAEIVRLQLTAGDDDYPRHIDRLRYDPRPYGTRTGYPELFSGVQGIDPTLTFARAGESAMGDLIDIRRQILKQNGVRGGPPVAYSQCAGVRVPVPPPPRGSARSKQVDVHAGCPRVVEYYVTVGLPIRGQPEGLWNARDTRGRRVALRGEVWTALVDEHSAGPNGWS
A35518A_1111711	A35518A_11117112	F038340	RRIVLYDGEGDLDRDFEWWDLEKDRFSILPQLPFSKERTDVLTCQSKTDIENINLMATLLSHHQALAYWQHLGRRFVADVEALLKRHLLQGILEVSWVHPATGERADDTQFFSALQELMAYAFEEYARLEKVRRNQWWRQGTSDRSGILEEMQALLQHYRAELLAESGRLLQEGAT*
A35518A_1114050	A35518A_11140503	F097916	MSKRGFALVAAALTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP*
A35518A_1119758	A35518A_11197582	F059374	TSAQLDDLLTAVDRFEAAVIARGGDLLVNSPTSHPPEDPDFVVPQRVPGEDAEAYSARINEAAERLEKADF*
A35518A_1122913	A35518A_11229132	F021632	MIPMIDGTSPLETRRISRDFQGALPEIEPVAFVARIIRDGLEIMHYPEYKRLNELSDDYLVSQIALAKAVPDDVWIRNGFVPLGEWQPAHD*
A35518A_1125017	A35518A_11250171	F017686	MAEMRSAPAAKSVLTKPSPMPDETARLFQLALHDVVRSSAVSMAELRECVKACASVLRDTDVGPAQMIITIKACAKEGTRRYPQILNEHELTNADFLMEQIIKWAIVEYYSEA*
A35518A_1127964	A35518A_11279641	F004400	MPDDTGKLKQGNFMQALDSIRKEAERLMARRDLPPEVKAGLERIIGLTRSKFDLGGDIE*
A35518A_1129829	A35518A_11298292	F028503	AVKHDYRKAGAACDGAGTPDLVRECYIGLGRNASGAAAFQYAGIRKRCDQVSSAGVPFCYEGAVRHLAYAPSELPRGVAFCKSLPEGDSRSRCWDGVGLQVGGFFSDSTSRQRACQSELQSDVAACVEGAGVGRSVSPRSGP*
A35518A_1130350	A35518A_11303502	F026661	INVWRTEPRRLDLEVDVTNVGNSIYRIAKESEEIPIQYAPSRTIGGSLKFHF*
A35518A_1133485	A35518A_11334851	F003882	LNTYNVTLKYEDRKIGPESRTVKVDASSISGAIGKATREFVKGLDRKQRFDANKGLHIEALRVTTDTEKVAAAGAGS
A35518A_1138329	A35518A_11383291	F007654	MSISPNVPTPQESYHYDTPGTPRWIAVLFVVLFAGLAILAYVGHSQQS
A35518A_1140273	A35518A_11402732	F016888	MHSSYALSAEDFSVERNGTSEHLSALWPGGWQPTDRLGVLLANPMDAV
A35518A_1147383	A35518A_11473831	F100511	MRASEVEGKSKIELWTRINAESEMLRRRVTPVHVQQRIMASLPDTPGTASNWWKQQVTMTPVSAIAIGVALLAVGALIIQALR*
A35518A_1148855	A35518A_11488551	F027633	IDVVARSVQGQVENDFQLQPKHTAFPVKAGSAFAGTVGKAASSVKLFSFSGKIHLKKR*
A35518A_1154719	A35518A_11547191	F071579	RAVAGIPQKLASASAALAILAWLFLLLGLMYARFFVTDPPPNVVITFSDKGLTRLFVELLSLGIGCVGLLLALVAFAGRARNRSLALAAVINGGVCVACVALLM*
A35518A_1177504	A35518A_11775041	F067652	MNVGDPNRTDIDHLLLRESDMPVVVKIPGKVKTGGAKGHYCKSNFSITNNSQN*
A35518A_1178853	A35518A_11788531	F007883	EIPIVVEEQGKHSLRAHVGNGGGRIEVHTVSGEIHVSGSN*
A35518A_1184166	A35518A_11841662	F090708	MIVERIKTVERDTDARDAAKHAENAFRRMGPSAALGERPSNRDLRRLEVMLVRRIVTG*
A35518A_1184267	A35518A_11842671	F004294	MECWLITSRAEVMRLEFGEEPPPEICLPDKPLSEIEDNAPKKAIQDAPYIIYKRYHLAHESWRLGIVFSVAPPTVGDILILSAYRAGHESRPHLA*
A35518A_1184267	A35518A_11842672	F006205	MDDIKQTLDKLREELTNAGKRLAELAEKAESELPAAGKRINEEYLRLQALLDSAVDKLRNR*
A35518A_1185145	A35518A_11851451	F070295	EPTAGKLVTYESMGVDVATLSDLITRDYFGSYKIVSALAQEYGFKYFFFVPPTIALGNKSLTPEEQKMKYKEERETALHKLSAAVHHIVERESSKYQNLYSMAHIFDQYDSLMWIDDGHATPIGNQVIAERMLAIIQARSSGEK*
A35518A_1193157	A35518A_11931571	F029941	LPDIASVLLVTSVLLVIAFVLLTVSLMRLRRTTRQLQAALEDESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKNEMRRQAEYNLSHRAKGAVRHLEEEPLRTALAAMRPMVLGLADEASPGLEAGGHPQHVLVVPMQRAGQL
A35518A_1202837	A35518A_12028371	F049886	LRQTPCVLYIAVDALIPARGKSAAGLDEFTAALDHAGIPAVWVTDRSRLEFDAARRKLAHTHPFISEGGCGVYP
A35518A_1210106	A35518A_12101061	F000168	CYDTVAYMPGPPPNPSDLATEIAQHLPEALVGERIIPRFVDSYVVEYGRHALQVHAALYRDRLTLLQREALLALTVQIFANVSAESGTGKTKTRLMLPKDAGIFRRKFLAVLAKQQKWNAGDALDFQNDLHIYEELIRRNATKRTRKSFEVANHPFVDRCAFLLDSSFIEKARFAASRTLGDLEDLAAHLVASASDAKQALKAK*
A35518A_1214177	A35518A_12141771	F026129	VHGLSFYGGAGVNRIDPHFQVGFDPQGSSPDRTQVELENPVNRLAIFGGVTEVFRRILDVGAQVYSVPEDATLFRLMGGIRIR*
A35518A_1238613	A35518A_12386131	F070692	VAAAAILPALILSWGTGRLPPMLLADPTYYTWPNTLAELRTATAMIPPAAPVSADNGLAVWLANRRTINDFPDKLCDACYVVIDHRPYISGPVDPIKRQAALDALPSSGRRILYEDGRFQVWSPVGA*
A35518A_1258986	A35518A_12589861	F040275	LMWARHREREIDVEERSRDQMAAEANTFAGAAAAAQSLLTAAKWEGVRNDRDDLFARMMQRHDEMAERLAQIHAAFGSSSEATSAAVRVNEELEACLRHLYGVYNALSRGEEVDEEWELLEAEERELSASRTYFGEAARAELLLNGGGRARI*
A35518A_1264856	A35518A_12648561	F040687	MSLKRSHTSSKSSFGGDAGAKVDRQELFDELKRMAASNEAFSPVDVSLAIGAGEPQVSKALLGLAAEGYLEKVDTGT
A35518A_1297730	A35518A_12977302	F005004	EDTGKFLWRPDYRPRLNEWVADFALAGQAGLEGAEWASRMILFRTYYLGLAPYETARHFMGLSERGWVNWTEEIRRRCGAELLRRGMFPPKKYFSGEMTDWRATAGS*
A35518A_1326011	A35518A_13260112	F087955	MSRGFTRPAVGGPMLEDIVLAALAAGRVRQAGRRPACPVCGDAMWTFERGTDGAELCCSGCGSRLWDAAPAGAEELRLIA*
A35518A_1334155	A35518A_13341551	F001986	AYGALMCTVCGKNVTFELESAPDLKKYGEGARVLSVLGSPRPPKTERPKRTGDEMLNDQTL*
A35518A_1334747	A35518A_13347471	F005510	MSLRGEPLEADVTIPDGTTVHVRIGVPEDSYIPKGELDTVTVELSANGEHIAAVSSVLNPDQTSEAHTLLREIVSGLESGELPPTAGAIEGLADSI*
A35518A_1340793	A35518A_13407932	F042596	VAKEPKKQDAEEEGGGEFDDFMADISQEIAQRVESLDPKPKAKPQPEERKKTPAVPDAGVIVDWPNIAERMIEEMR*
A35518A_1370448	A35518A_13704482	F095432	VLLVPPCPSVPPGAGNQPKKAIKPRKRAKQVEEGYDGGGRVDRDMHAAAIRRHDDGDLAAIS*
A35518A_1398171	A35518A_13981711	F060367	VTAWGSGNALVVFGDFRLGQKGTVVSSRIMSSVTHNFGASWSAPQVISGSLDQAFVATPTVASNGHIFVSFLNTTDLTRGRDDYEVVQVSPTTGARLAGPFKVATTIDGFTDYPVAFGRQTYQDSVFRSWAAGNMTADPTDPKHLAVVWSDMRNSPKPAANLDPYASVTNSDVVVSESIDGGQKWSTPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001565: Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences