NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F096276

Metagenome / Metatranscriptome Family F096276

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096276
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 103 residues
Representative Sequence MERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ
Number of Associated Samples 86
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.95 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 90.48 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(14.286 % of family members)
Environment Ontology (ENVO) Unclassified
(35.238 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.857 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.64%    β-sheet: 26.87%    Coil/Unstructured: 51.49%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13302Acetyltransf_3 50.48
PF00561Abhydrolase_1 17.14
PF12697Abhydrolase_6 11.43
PF05544Pro_racemase 7.62
PF13399LytR_C 2.86
PF08241Methyltransf_11 0.95
PF00027cNMP_binding 0.95
PF13360PQQ_2 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG3938Proline racemase/hydroxyproline epimeraseAmino acid transport and metabolism [E] 7.62

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.14 %
UnclassifiedrootN/A2.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000886|AL3A1W_1144034All Organisms → cellular organisms → Bacteria1583Open in IMG/M
3300001359|A3035W6_1019725All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300001527|A3513AW1_1083635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium736Open in IMG/M
3300001565|A35518A_1075921All Organisms → cellular organisms → Bacteria → Proteobacteria626Open in IMG/M
3300004479|Ga0062595_100180286Not Available1277Open in IMG/M
3300005329|Ga0070683_100365820All Organisms → cellular organisms → Bacteria → Proteobacteria1373Open in IMG/M
3300005336|Ga0070680_100260973All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300005337|Ga0070682_101340103All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005338|Ga0068868_100020418All Organisms → cellular organisms → Bacteria → Proteobacteria4977Open in IMG/M
3300005339|Ga0070660_101827390All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005339|Ga0070660_101895098All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300005341|Ga0070691_10078185All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300005345|Ga0070692_10169291All Organisms → cellular organisms → Bacteria1258Open in IMG/M
3300005365|Ga0070688_100498289All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300005366|Ga0070659_100482214All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300005366|Ga0070659_100751393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria846Open in IMG/M
3300005406|Ga0070703_10341142All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300005435|Ga0070714_100297357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1504Open in IMG/M
3300005435|Ga0070714_100587323All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300005435|Ga0070714_101077376All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300005439|Ga0070711_100167504All Organisms → cellular organisms → Bacteria → Proteobacteria1672Open in IMG/M
3300005439|Ga0070711_100281588All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300005529|Ga0070741_11066054All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005537|Ga0070730_11000676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia521Open in IMG/M
3300005539|Ga0068853_101882007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300005544|Ga0070686_100398768All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300005549|Ga0070704_100802877All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300005563|Ga0068855_101997966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia586Open in IMG/M
3300005578|Ga0068854_100406648Not Available1127Open in IMG/M
3300005614|Ga0068856_100745243All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300005617|Ga0068859_101641369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia710Open in IMG/M
3300005764|Ga0066903_104004957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia790Open in IMG/M
3300005842|Ga0068858_100607647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1061Open in IMG/M
3300006046|Ga0066652_100073254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2678Open in IMG/M
3300006173|Ga0070716_100243972All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300006173|Ga0070716_100881829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300006755|Ga0079222_10100331All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300006794|Ga0066658_10297663All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300006806|Ga0079220_10227184All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300006852|Ga0075433_10859617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia792Open in IMG/M
3300006904|Ga0075424_100149916All Organisms → cellular organisms → Bacteria → Terrabacteria group2471Open in IMG/M
3300009101|Ga0105247_10861022All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300009148|Ga0105243_12293605All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300009148|Ga0105243_12864109Not Available523Open in IMG/M
3300009177|Ga0105248_11590326All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300009545|Ga0105237_11367304All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300009545|Ga0105237_11418227All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300009551|Ga0105238_12024173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium610Open in IMG/M
3300010043|Ga0126380_12196388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300010371|Ga0134125_10019927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia7483Open in IMG/M
3300010371|Ga0134125_10443323All Organisms → cellular organisms → Bacteria → Proteobacteria1440Open in IMG/M
3300010371|Ga0134125_10883053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria982Open in IMG/M
3300010399|Ga0134127_10680678All Organisms → cellular organisms → Bacteria → Proteobacteria1066Open in IMG/M
3300010867|Ga0126347_1235283All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum634Open in IMG/M
3300012955|Ga0164298_10105816All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300012958|Ga0164299_10117052All Organisms → cellular organisms → Bacteria → Proteobacteria1416Open in IMG/M
3300012971|Ga0126369_10522445All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300012985|Ga0164308_10553692All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300012986|Ga0164304_10905605All Organisms → cellular organisms → Bacteria → Proteobacteria690Open in IMG/M
3300013100|Ga0157373_10902523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria656Open in IMG/M
3300013104|Ga0157370_11097962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium719Open in IMG/M
3300013104|Ga0157370_11307135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria653Open in IMG/M
3300013766|Ga0120181_1060124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aurantiacum845Open in IMG/M
3300013770|Ga0120123_1094319All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300013772|Ga0120158_10350404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium695Open in IMG/M
3300013832|Ga0120132_1010316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1544Open in IMG/M
3300014052|Ga0120109_1076878All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300014829|Ga0120104_1002433All Organisms → cellular organisms → Bacteria3368Open in IMG/M
3300014968|Ga0157379_10400712All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300014969|Ga0157376_10987605All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300015089|Ga0167643_1020400All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300019890|Ga0193728_1057786All Organisms → cellular organisms → Bacteria1872Open in IMG/M
3300020069|Ga0197907_10493808All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300020070|Ga0206356_11031153All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300020078|Ga0206352_10492742All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum836Open in IMG/M
3300025464|Ga0208076_1056254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium683Open in IMG/M
3300025552|Ga0210142_1058891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria746Open in IMG/M
3300025625|Ga0208219_1047333All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300025898|Ga0207692_10376266All Organisms → cellular organisms → Bacteria → Terrabacteria group881Open in IMG/M
3300025898|Ga0207692_10391780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria864Open in IMG/M
3300025911|Ga0207654_10081275All Organisms → cellular organisms → Bacteria1951Open in IMG/M
3300025912|Ga0207707_10008666All Organisms → cellular organisms → Bacteria8825Open in IMG/M
3300025912|Ga0207707_10025538All Organisms → cellular organisms → Bacteria5168Open in IMG/M
3300025914|Ga0207671_10565087All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300025915|Ga0207693_10024854All Organisms → cellular organisms → Bacteria4751Open in IMG/M
3300025915|Ga0207693_10407160All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300025915|Ga0207693_10708547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria779Open in IMG/M
3300025916|Ga0207663_10240033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1329Open in IMG/M
3300025919|Ga0207657_10183823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1689Open in IMG/M
3300025928|Ga0207700_10662585All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300025929|Ga0207664_10908617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300025929|Ga0207664_11274322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium654Open in IMG/M
3300025931|Ga0207644_10616486All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300025944|Ga0207661_10008934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7177Open in IMG/M
3300025944|Ga0207661_10435882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1192Open in IMG/M
3300025949|Ga0207667_10395184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1408Open in IMG/M
3300025981|Ga0207640_11243703All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum663Open in IMG/M
3300026041|Ga0207639_10056884All Organisms → cellular organisms → Bacteria3000Open in IMG/M
3300026142|Ga0207698_10840472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium923Open in IMG/M
3300026142|Ga0207698_10849886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria917Open in IMG/M
3300027765|Ga0209073_10480994All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300031938|Ga0308175_100239539All Organisms → cellular organisms → Bacteria1814Open in IMG/M
3300031939|Ga0308174_11269719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum629Open in IMG/M
3300032074|Ga0308173_10983276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria783Open in IMG/M
3300032074|Ga0308173_11266668All Organisms → cellular organisms → Bacteria690Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere14.29%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost9.52%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.57%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil4.76%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.76%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.90%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.90%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.95%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.95%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000886Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001359Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-35cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001527Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001565Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina newEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015089Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025464Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AL3A1W_114403433300000886PermafrostMAPSGHAEFVIRFRGGSFESWKAAFDRHEPARIRHGAVGHWIARSIDDPNEFIAVVEFTSVGGARGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDKVTYST*
A3035W6_101972523300001359PermafrostMAPSGHAEFVIRFRGGSFESWKAAFDRHEPARIRHGAVGLWIARSIDDPNEXXXXRGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDKVTYST*
A3513AW1_108363523300001527PermafrostVIRFRGGSFESWKAAFDRHEPARIRHGAVGHWIARSIDDPNEFIAVVEFTSVGGARGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDKVTYST*
A35518A_107592123300001565PermafrostMPRSGQVEFVIRFRGGNFESWKAAFDKHEPQRLRHGAVGHWIARSIDDPNEFIGVVEFTSVGGARGYARDADRLDLHEALMLEGGPHQKTWEEGINETVDRVTYST*
Ga0062595_10018028613300004479SoilMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEE*
Ga0070683_10036582013300005329Corn RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ*
Ga0070680_10026097323300005336Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSLDDPNEFIGVVEFASRGGARAYASDADRMDVQRALMIEGGPHQKTWDEGIHETVDAVRYEQ*
Ga0070682_10134010323300005337Corn RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHET
Ga0068868_10002041833300005338Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0070660_10182739023300005339Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHET
Ga0070660_10189509813300005339Corn RhizosphereMAEEGTIQFVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYQG*
Ga0070691_1007818523300005341Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ*
Ga0070692_1016929113300005345Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHET
Ga0070688_10049828923300005365Switchgrass RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGG
Ga0070659_10048221423300005366Corn RhizosphereMAEEGTIQFVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYPQ*
Ga0070659_10075139313300005366Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0070703_1034114223300005406Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYE
Ga0070714_10029735733300005435Agricultural SoilVETSAPGKFQIVIRFRGPDYEAWKTLFDAHEPQRVKHGAVGHWIARSVDDPREYIGVVEFTSRGGAHAYAEDPDRMDVQRAVHVDGGPHNKTWDETIVETIAAVTYVG*
Ga0070714_10058732323300005435Agricultural SoilMERPGSVQFVIRFRGGDFASWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ*
Ga0070714_10107737623300005435Agricultural SoilMPDEGSIHFVVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVQRALMMEGGPHQKTWDEGIHETVATVRYSQ*
Ga0070711_10016750433300005439Corn, Switchgrass And Miscanthus RhizosphereMPDEGSIHFVVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVQRALMLEGGPHQKTWDEGIHETVATVRYSQ*
Ga0070711_10028158823300005439Corn, Switchgrass And Miscanthus RhizosphereMLQPGTIQFVIRFRGGDFEVWKEAFAAHEPQRVKHGAVGHWIARSTEDPNAFVGVVEFTSHGGARAYAEDADRLDVQRALMMEGGPHQKTWDEEIVETIDLVKYEG*
Ga0070741_1106605423300005529Surface SoilVQSEGSIQFVIRFRGGDFERWKAAFDAHEPQRVKHGAVGHWVARSLDDPREFIGVVEFTSRGGAHAYAEDPDRMDVQRALMVEGGPHHKTWDEGISEVVDRAEYRG*
Ga0070730_1100067623300005537Surface SoilDFEGWKAAFEAHEPQRLKHGAVGHWIARSVDDPNEFIGVVEFASRGGARAYARDPDRMDVQRALLVEGGPHQRTWDEGIDEVVERAVYAG*
Ga0068853_10188200713300005539Corn RhizosphereETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYPQ*
Ga0070686_10039876813300005544Switchgrass RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ*
Ga0070704_10080287713300005549Corn, Switchgrass And Miscanthus RhizosphereMEQPGGIHFVVRFRGGDFESWKAAFDEHEPQRVKHGAIGHWIGRSVDDPSEFVGVVEFTSRGGARAYAGDVDRLDLQRALLIDGGPHEKTWDEAIVETLARVRYAQ*
Ga0068855_10199796623300005563Corn RhizosphereSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0068854_10040664813300005578Corn RhizosphereERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ*
Ga0068856_10074524323300005614Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ*
Ga0068859_10164136923300005617Switchgrass RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0066903_10400495723300005764Tropical Forest SoilMERPGSVQFVIRFRGGDFETWKAAFDQHEPQRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVAAVRYAE*
Ga0068858_10060764713300005842Switchgrass RhizosphereGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0066652_10007325433300006046SoilVIRFRGGDFESWKAAFDAHEPVRVRHGAVGHWIARSIDDANEFIGIVEFTSRGGARAYAADADRMDVQRALMIEGGPHQKTWDEGIHETIDVVRYQQ*
Ga0070716_10024397223300006173Corn, Switchgrass And Miscanthus RhizosphereVQSVGSIQFVVRFRGGDFEGWKAAFDAHEPQRVKHGAVGHWVARSIDDPNAFIAVVEFASRGGAHAYAEDPDRMEVQRALLAEGGPHQKTWDEGISEVVMRAEYRG*
Ga0070716_10088182923300006173Corn, Switchgrass And Miscanthus RhizosphereVIRFRGPDYEAWKTVFDAHEPQRVKHGAVGHWIARSVDDPKEYIGVVEFTSRGGAHAYAEDPDRMDVQRAVHVDGGPHNKTWDETIVETIAAVTYVG*
Ga0079222_1010033123300006755Agricultural SoilMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0066658_1029766323300006794SoilMERPGSVQFVIRFRGGDFDSWKQAFDDYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEG*
Ga0079220_1022718423300006806Agricultural SoilMAEEGTIQFVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYQQ*
Ga0075433_1085961713300006852Populus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0075424_10014991623300006904Populus RhizosphereMADEGSVHFVIRFRGSDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMIEGGPHQKTWDEGIHETVAVVRYAQ*
Ga0105247_1086102223300009101Switchgrass RhizosphereMERPGSVQFIIRFRGGDFESWKDAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0105243_1229360523300009148Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVV
Ga0105243_1286410923300009148Miscanthus RhizosphereMPDEGSIHFVVRFRGGDFESWKAAFDEHEPQRVKHGAIGHWIGRSVDDPSEFVGVVEFTSRGGARAYAGDVDRLDLQRALLIDGGPHEKTWDEAIVETLARVRYAQ*
Ga0105248_1159032623300009177Switchgrass RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGQWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0105237_1136730413300009545Corn RhizosphereMAEEGTIQCVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYPQ*
Ga0105237_1141822723300009545Corn RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0105238_1202417313300009551Corn RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDE
Ga0126380_1219638813300010043Tropical Forest SoilRFRGGDFDSWKEAFDAHEPVRVKHGAVGHWIARSLDDPNEFIGVVEFTSRGGARAYAADADRMDVQRALIIEGGPHQKTWDEGIHETVDAVRYAQ*
Ga0134125_1001992763300010371Terrestrial SoilMERPGSVQFVIRFRGGDFDSWKEAFDAHEPVRVKHGAVGHWIARSIDDTNEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDAVRYEQ*
Ga0134125_1044332333300010371Terrestrial SoilMERPGSVQFVIRFRGGDFASWKEAFDAHEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVR
Ga0134125_1088305313300010371Terrestrial SoilKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0134127_1068067833300010399Terrestrial SoilMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRLDVQRGLLLEGGPHQTKC
Ga0126347_123528313300010867Boreal Forest SoilMPRSGHVEFVIRFRGGNFESWKAAFDKHEPQRIRHGAVGHWIARSIDDPNSFIGVVEFTSVGGARGYAADVDRLDVQDALMLEGGPHQKTWEEAILETVDKVTYAG*
Ga0164298_1010581623300012955SoilMPDEGSIHFVVRFRGGDFETWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVQRALMMEGGPHQKTWDEGIHETVATVRYSQ*
Ga0164299_1011705233300012958SoilMPDEGSIHFVVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVERALMMEGGPHQKTWDGGLHETVATCRYSQ*
Ga0126369_1052244523300012971Tropical Forest SoilMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSLDDPNEFIGVVEFTSRGGARAYAADPDRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYAQ*
Ga0164308_1055369223300012985SoilMPDEGSIHFVVRFRGGDFETWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVQRALMLEGGPHQKTWDEGIHETVDAVRYEQ*
Ga0164304_1090560523300012986SoilMPDEGSIHFVVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFASRGGARAYASDADRMDVQRALMIEGGPHQKTWDEGIHETVATVRYSQ*
Ga0157373_1090252313300013100Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ*
Ga0157370_1109796223300013104Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0157370_1130713513300013104Corn RhizosphereERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ*
Ga0120181_106012413300013766PermafrostMAPSGHAEFVIRFRGGSFESWKAAFDRHEPARIRHGAVGHWIARSIDDPNEFIAVVEFTSVGGARGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDK
Ga0120123_109431923300013770PermafrostMPRSGQVEFVIRFRGGNFENWKAAFDKHEPQRIRHGAVGHWIARSIDDPHEFIAVVEFTSVGGARGYASDPDRLDVQEALLIEGGPHNKTWDEHITEVVDRAT
Ga0120158_1035040413300013772PermafrostMPRSGHVEFVIRFRGGNFENWKAAFDKHEPQRIRHGAVGHWIARSIDDPHEFIAVVEFTSVGGARGYASDPDRLDVQEALLIEGGPHNKTWDEHITEAVDRATYPG*
Ga0120132_101031623300013832PermafrostMPRSRHAEFVIRFRGGSFESWKAAFDKHEPARIRHGAVGHWIARSIDDPNEFIAVVEFTSVGGARGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDKVTYST*
Ga0120109_107687823300014052PermafrostMPRSGHVEFVIRFRGGSFESWKAAFDKHEPQRIRHGAVGHWIARSIDDPNEFIGVVEFTSVGGARAYARDADRMDLADALMLEGGPHQKTWEEGIHETVDKVTYST*
Ga0120104_100243353300014829PermafrostMAPSGHAEFVIRFRGGSFESWKAAFDRHEPARIRHGAVGHWIARSIDDPNEFIAVVEFTSVGGARGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDRVTYST*
Ga0157379_1040071233300014968Switchgrass RhizosphereMERIGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0157376_1098760523300014969Miscanthus RhizosphereMPDEGSIHFVVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ*
Ga0167643_102040023300015089Glacier Forefield SoilMPRSGHVEFVIRFRGGSFESWKAAFDKHEPQRIRHGAVGHWIARSIDDPNEFIGVVEFTSVGGARAYALDPDRLEVADALLLEGGPHQKTWEEGIHETVDKVTYST*
Ga0193728_105778623300019890SoilMARSRHAEFVIRFRGGSFESWKAAFEKHEPARIRHGAVGHWIARSIDDPNEFIAVVEFTSVGGARGYAGDVDRLDVEDALLIEGGPHQKTWEEGIHETVDKVTYST
Ga0197907_1049380823300020069Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ
Ga0206356_1103115323300020070Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ
Ga0206352_1049274223300020078Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFERWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ
Ga0208076_105625423300025464Arctic Peat SoilMPRSGHIEFVIRFRGGNFENWKAAFDKHEPDRLRHGAVGHWIARSIDDPHEFIAVVEFTSVGGARGYAADAARLDVQEALMMEGGPHRKTWEEGINETVDDVTYLT
Ga0210142_105889113300025552Natural And Restored WetlandsVRKEPPDVQSEGSIQFVIRFRGGDFEGWKAAFEAHEPQRVRHGAVGHWVARSLEDPHEFIGVVEFASRGGARAYAEDPDRMDVQRALMIEGGPHQKTWVEGIYEVVVRGESAG
Ga0208219_104733323300025625Arctic Peat SoilMPRPGHIEFVIRFRGGNFENWKAAFDKHEPDRLRHGAVGHRIARSIDDPYEFIAVVEFTSVGGARGYAADADRLEVQEAVMIEGGPHRKTWEEGINETVADVTYVT
Ga0207692_1037626623300025898Corn, Switchgrass And Miscanthus RhizosphereVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVERALMMEGGPHQKTWDEGIHETVATVRYSQ
Ga0207692_1039178013300025898Corn, Switchgrass And Miscanthus RhizospherePEPGTIQFVIHFRGGDFESWKAAFEAHEPQRVKHGAVRHWLARSTDNPNEFIGVVEFTSRGGAHAYAADPDRLDMQRALLIEGGPHHKTWDEGIYETIDAETYPG
Ga0207654_1008127533300025911Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDEYEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ
Ga0207707_1000866673300025912Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSLDDPNEFIGVVEFASRGGARAYASDADRMDVQRALMIEGGPHQKTWDEGIHETVDAVRYEQ
Ga0207707_1002553823300025912Corn RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ
Ga0207671_1056508723300025914Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDSVRYEQ
Ga0207693_1002485443300025915Corn, Switchgrass And Miscanthus RhizosphereMPDEGSIHFVVRFRGGDFDTWKTAFDAHEPVRVKHGAVGHWIARSIDDPNEFIGVVEFTSRGGARAYAGDVDRMDVQRALMLEGGPHQKTWDEGIHETVATVRYSQ
Ga0207693_1040716023300025915Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ
Ga0207693_1070854723300025915Corn, Switchgrass And Miscanthus RhizospherePFEKELLDVQSVGSIQFVVRFRGGDFEGWKAAFDAHEPQRVKHGAVGHWVARSIDDPNEFIAVVEFASRGGAHAYAEDPDRMDVQRALLAEGGPHQKTWDEGISEVVLRAEYRG
Ga0207663_1024003323300025916Corn, Switchgrass And Miscanthus RhizosphereMLQPGTIQFVIRFRGGDFEVWKEAFAAHEPQRVKHGAVGHWIARSTEDPNAFVGVVEFTSHGGARAYAEDADRLDVQRALMMEGGPHQKTWDEEIVETIDLVKYEG
Ga0207657_1018382333300025919Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQK
Ga0207700_1066258523300025928Corn, Switchgrass And Miscanthus RhizosphereMERPGSVQFVIRFRGGDFASWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ
Ga0207664_1090861723300025929Agricultural SoilRPGSVQFVIRFRGGDFASWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDAVRYEQ
Ga0207664_1127432223300025929Agricultural SoilVETSAPGKFQIVIRFRGPDYEAWKTLFDAHEPQRVKHGAVGHWIARSVDDPREYIGVVEFTSRGGAHAYAEDPDRMDVQRAVHVDGGPHNKTW
Ga0207644_1061648623300025931Switchgrass RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHEVVDVVRYEQ
Ga0207661_1000893483300025944Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEQ
Ga0207661_1043588213300025944Corn RhizosphereGVSMAEEGTIQFVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYPQ
Ga0207667_1039518423300025949Corn RhizosphereMAEEGTIQFVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYQQ
Ga0207640_1124370323300025981Corn RhizosphereMERPGSVQFVIRFRGGDFESWKEAFDAHEPVRVKHGAVGHWIARSLDDPNEFIGVVEFASRGGARAYASDADRMDVQRALMIEGGPHQK
Ga0207639_1005688443300026041Corn RhizosphereMERPGSVQFVIRFRGGDFERWKQAFDAHEPVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMEGGPHQKTWDEGIHETVDVVRYEE
Ga0207698_1084047223300026142Corn RhizosphereMAEEGTIQFVIRFRGGDFETWKAAFDEHEPVRVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLEVQHALMVEGGPHHRTWDEGIHETVAAVRYPQ
Ga0207698_1084988613300026142Corn RhizospherePGSVQFVIRFRGGDFESWKEAFDAHESVRVKHGAVGHWIARSIDDANEFIGVVEFTSRGGARAYAADAARMDVQRALMIEGGPHQKTWDEGIHETVDSVRYEQ
Ga0209073_1048099423300027765Agricultural SoilVQSVGSIQFVVRFRGGDFEGWKAAFDAHEPQRVKHGAVGHWVARSIDDPNAFIAVVEFASRGGAHAYAEDPDRMDVQRALLAEGGPHQKTWDE
Ga0308175_10023953923300031938SoilMAEEGSIEFVIRFRGGDFETWKAAFDAHEPVRVKHGATGHWIARSIDDPNEFIGVVESASRGGARAYAADVDRLEVQGALMVEGGPHNKTWDEGIHETVAVVRYEQ
Ga0308174_1126971913300031939SoilMSDEGSIQFVIRFRGGDFQTWKAAFDEHEPARVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLAVQHALMAEGGPHHKT
Ga0308173_1098327623300032074SoilMERPGSVQFVIRFRGGDFESWKQAFDAHEPVRVKHGAVGHWIARSLDDANEFIGVVEFTSRGGARAYAADADRMDVQRALMMKGGPHQKTWDEGIHETVDAVRYEQ
Ga0308173_1126666823300032074SoilMSDEGSIQFVIRFRGGDFQTWKAAFDEHEPARVKHGATGHWIARSIDDPNEFIGVVEFTSRGGARAYAADVDRLAVQHALMAEGGPHHKTWDEGIHETVAVVRYQQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.