Sample 3300001383

3300001383: Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012

Overview

Basic Information
IMG/M Taxon OID	3300001383 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0084162 \| Gp0056239 \| Ga0003480
Sample Name	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	50485077
Sequencing Scaffolds	62
Novel Protein Genes	66
Associated Families	54

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	10
All Organisms → cellular organisms → Bacteria → Proteobacteria	6
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1
Not Available	17
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Glaciecola → unclassified Glaciecola → Glaciecola sp. 4H-3-7+YE-5	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	polar biome → polar → peat soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Barrow Environmental Observatory site, Barrow, Alaska
Coordinates	Lat. (^o)	71.2999	Long. (^o)	-156.61	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001677	Metagenome / Metatranscriptome	654	Y
F001823	Metagenome / Metatranscriptome	630	Y
F001962	Metagenome / Metatranscriptome	611	Y
F003565	Metagenome / Metatranscriptome	479	Y
F004745	Metagenome / Metatranscriptome	425	Y
F006205	Metagenome / Metatranscriptome	379	Y
F007147	Metagenome / Metatranscriptome	357	Y
F011100	Metagenome / Metatranscriptome	295	Y
F011357	Metagenome	292	Y
F011513	Metagenome / Metatranscriptome	290	Y
F012694	Metagenome / Metatranscriptome	278	Y
F013130	Metagenome / Metatranscriptome	274	Y
F014525	Metagenome	262	Y
F015418	Metagenome / Metatranscriptome	255	Y
F016092	Metagenome / Metatranscriptome	250	Y
F017762	Metagenome	239	Y
F019258	Metagenome / Metatranscriptome	231	Y
F021023	Metagenome	221	Y
F021632	Metagenome	218	Y
F024640	Metagenome / Metatranscriptome	205	Y
F024681	Metagenome	205	Y
F024897	Metagenome / Metatranscriptome	204	Y
F026622	Metagenome / Metatranscriptome	197	Y
F026747	Metagenome / Metatranscriptome	197	Y
F027693	Metagenome	194	Y
F032019	Metagenome / Metatranscriptome	181	Y
F033196	Metagenome	178	Y
F033646	Metagenome / Metatranscriptome	177	Y
F035030	Metagenome / Metatranscriptome	173	Y
F037998	Metagenome	167	Y
F038917	Metagenome / Metatranscriptome	165	Y
F039401	Metagenome	164	Y
F044109	Metagenome / Metatranscriptome	155	Y
F044817	Metagenome	154	Y
F049308	Metagenome	147	Y
F050579	Metagenome / Metatranscriptome	145	Y
F055961	Metagenome / Metatranscriptome	138	N
F055962	Metagenome / Metatranscriptome	138	Y
F064046	Metagenome / Metatranscriptome	129	Y
F065250	Metagenome / Metatranscriptome	128	Y
F065994	Metagenome / Metatranscriptome	127	Y
F066026	Metagenome / Metatranscriptome	127	Y
F069413	Metagenome / Metatranscriptome	124	Y
F070394	Metagenome	123	Y
F071790	Metagenome	122	Y
F072634	Metagenome / Metatranscriptome	121	Y
F072806	Metagenome / Metatranscriptome	121	Y
F073982	Metagenome / Metatranscriptome	120	N
F076660	Metagenome / Metatranscriptome	118	Y
F092933	Metagenome	107	Y
F097844	Metagenome / Metatranscriptome	104	N
F098285	Metagenome	104	Y
F098318	Metagenome	104	Y
F106171	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI20194J14741_1000003	All Organisms → cellular organisms → Bacteria	38158	Open in IMG/M
JGI20194J14741_1000060	All Organisms → cellular organisms → Bacteria	15838	Open in IMG/M
JGI20194J14741_1000268	All Organisms → cellular organisms → Bacteria	8325	Open in IMG/M
JGI20194J14741_1000386	All Organisms → cellular organisms → Bacteria → Proteobacteria	7122	Open in IMG/M
JGI20194J14741_1000942	All Organisms → cellular organisms → Bacteria	4660	Open in IMG/M
JGI20194J14741_1001169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4166	Open in IMG/M
JGI20194J14741_1001177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4154	Open in IMG/M
JGI20194J14741_1001189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4137	Open in IMG/M
JGI20194J14741_1001506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3629	Open in IMG/M
JGI20194J14741_1001537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3589	Open in IMG/M
JGI20194J14741_1001561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	3555	Open in IMG/M
JGI20194J14741_1001567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3546	Open in IMG/M
JGI20194J14741_1001750	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
JGI20194J14741_1002251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2876	Open in IMG/M
JGI20194J14741_1002395	All Organisms → cellular organisms → Bacteria → Proteobacteria	2778	Open in IMG/M
JGI20194J14741_1002600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2641	Open in IMG/M
JGI20194J14741_1002880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2506	Open in IMG/M
JGI20194J14741_1003268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	2309	Open in IMG/M
JGI20194J14741_1003405	Not Available	2251	Open in IMG/M
JGI20194J14741_1003585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2183	Open in IMG/M
JGI20194J14741_1003871	Not Available	2078	Open in IMG/M
JGI20194J14741_1003996	Not Available	2039	Open in IMG/M
JGI20194J14741_1004538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1881	Open in IMG/M
JGI20194J14741_1004830	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
JGI20194J14741_1004875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1793	Open in IMG/M
JGI20194J14741_1004878	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
JGI20194J14741_1005335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1670	Open in IMG/M
JGI20194J14741_1005951	Not Available	1527	Open in IMG/M
JGI20194J14741_1006013	All Organisms → cellular organisms → Bacteria → Proteobacteria	1517	Open in IMG/M
JGI20194J14741_1006222	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
JGI20194J14741_1006271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
JGI20194J14741_1006632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
JGI20194J14741_1007202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
JGI20194J14741_1007817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1223	Open in IMG/M
JGI20194J14741_1007890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus	1215	Open in IMG/M
JGI20194J14741_1007910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1213	Open in IMG/M
JGI20194J14741_1008367	Not Available	1150	Open in IMG/M
JGI20194J14741_1008889	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
JGI20194J14741_1009704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1010	Open in IMG/M
JGI20194J14741_1009727	Not Available	1007	Open in IMG/M
JGI20194J14741_1009746	Not Available	1004	Open in IMG/M
JGI20194J14741_1010310	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
JGI20194J14741_1011624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	852	Open in IMG/M
JGI20194J14741_1011630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	852	Open in IMG/M
JGI20194J14741_1011747	Not Available	845	Open in IMG/M
JGI20194J14741_1011810	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
JGI20194J14741_1012093	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	822	Open in IMG/M
JGI20194J14741_1012550	Not Available	795	Open in IMG/M
JGI20194J14741_1012749	Not Available	784	Open in IMG/M
JGI20194J14741_1012756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
JGI20194J14741_1013215	Not Available	758	Open in IMG/M
JGI20194J14741_1013328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	752	Open in IMG/M
JGI20194J14741_1013607	Not Available	737	Open in IMG/M
JGI20194J14741_1014505	Not Available	696	Open in IMG/M
JGI20194J14741_1014609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	691	Open in IMG/M
JGI20194J14741_1015877	Not Available	644	Open in IMG/M
JGI20194J14741_1017090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	604	Open in IMG/M
JGI20194J14741_1017279	Not Available	599	Open in IMG/M
JGI20194J14741_1018241	Not Available	572	Open in IMG/M
JGI20194J14741_1019188	Not Available	547	Open in IMG/M
JGI20194J14741_1019255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
JGI20194J14741_1021143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Glaciecola → unclassified Glaciecola → Glaciecola sp. 4H-3-7+YE-5	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI20194J14741_1000003	JGI20194J14741_100000326	F037998	MIYGRRPRQVLVVWGVSLGAIALIYWLEYSAPALHELLLPFYWIILALAFYLTWRWLRARSRKDRRDQDRRHADRRDENDTTSS*
JGI20194J14741_1000060	JGI20194J14741_100006018	F024897	LGEPRYRLAEAYIGAGQGDSALAMLQSSLRLGYVGAPETYLSMGKRLEFSGRNTVAAKLYSDYLEAKYTEAVWDRSEAIDRPIPTADIAVAAHLPLLYMRARESELAIKTAAALSAFDPSRDTIVDRFVSDVGSRRRANWVARSSLLPCSTARNARSRDAIAFGACGVFRRKL*
JGI20194J14741_1000268	JGI20194J14741_10002688	F006205	MDDIKQTLDKLREELTNAGKRLAELAEKAESELPAAGKRINEEYLRLQALLDSAVDKLRXK*
JGI20194J14741_1000386	JGI20194J14741_10003867	F049308	VRKYCNFCGQPMAPDDKECKQCGWDLSKNAPPTTDPGDNKARLGVVAGLVVAYGVMSFLIQGSPAEAREEPVRAPQYTDAPALTTEPVNGPEMAIGTLPQAVPSTAASIASSALISIKVADTKGASIQPRDALQYKFELPETDQKCRLVGSTKGIGGFGRNIEVFLLTDDDYVFWHANPAAIAASQWETFRGSETTLDYALPGPGTYHFVVSNQMSPTPQTVAVKAXVTXXR*
JGI20194J14741_1000942	JGI20194J14741_10009422	F001677	MSRLTFAASLLLAVSSSSLAQQATFTANDTGPASDAIFETKDAAIATAGLVPLAKTQLPKGEREVRIWYSGFGNPQYLVIIRQKGANITGRLMLWWDQYYESTPASADVRVDNFVRRGYDCGPISKRDSHFDEDRWVSSICEANLKGSPDWKAFLSEVEAHALSQSGDVAPADDQSGDENWGITVERRSGANYGVSHYHTALTLGAPEPGRGPKLQGMVGDLAAASKREPVVAQH*
JGI20194J14741_1001169	JGI20194J14741_10011697	F011100	MGLPGMVLSAIAAVAGAIMYWAVTYQGHGFRLSTVGLILMIAGAAGFVVSTIVFAASRREVGTGTHSMSRQTTDSEGRSTSEHEERK*
JGI20194J14741_1001177	JGI20194J14741_10011775	F011100	MGLPGMVLSAIATAVGAIMYWAVTYQGHGFRLSTVGVILMIAGIAGFVVSSIVFGVSRNSIGAGHHTMDRQVTDPQGHTSSVHEETK*
JGI20194J14741_1001189	JGI20194J14741_10011895	F011100	MVLSAVAAAVGAIMYWAVTYQGTGFRLSTVGIILMIVGAFGFVVSAIVFAVSRGPVRSTKHSMDRQVVDARGNSSSIHEGSK*
JGI20194J14741_1001506	JGI20194J14741_10015063	F011357	LRVKISIQAKKWRRSVPRAWKQTQLLHPAKIAGCVAISAFNILWHGHGIFRSSPSVLRFAIVGVVCYVVATIAEFLWLLYSGPSFTGFESPTAAKSATQAASTDPLVEQLKELPPAELREEVLQLAKEMKSFEAVSDREFVDTLAGARPVNVATEAERDEVLDQQSAELMQHNLRTWRAYRERFYRPARAFRDELRKRLGIRNVNSEPRIPALDRAALTGANPIAQAADYLAGLARRLK*
JGI20194J14741_1001537	JGI20194J14741_10015371	F032019	REYAIRQIAKREGFSLEKHGEDSYRLINERLNVIVFGLDGVPLETIASFLEKPESLANSPDAHHR*
JGI20194J14741_1001561	JGI20194J14741_10015617	F092933	ARRFVTLYWSEFPSAARLREVVEEAVADSEFRPGMNFLWNRKPGPANPASTEYLREMLYXLQMLAERVGPHSWAIVGHNPADFGKARVLEAISDGTKVTIRAFKSAGDAEEWLRNPVRYEGDIVHFPARIPSLMGPLFA*
JGI20194J14741_1001567	JGI20194J14741_10015672	F065250	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLIPAKSN*
JGI20194J14741_1001750	JGI20194J14741_10017505	F039401	TYTISRQERLIKAYATGIIRADDLNDFVDALLADPDLGPGLRALNDASDAEPDITILQLAEVASRVLQLINRGLGRIAIVAQSRATYRVSKTFSVLLRALGIDVEVFTELCAAEAWLEDSSGSSDTGETPLPR*
JGI20194J14741_1002251	JGI20194J14741_10022511	F011513	RSDAAHNASVSSIDAACVHDLRIMVAHGFRHFPKKQL*
JGI20194J14741_1002395	JGI20194J14741_10023951	F033196	VKSARFNRLLASTALGLVLVLGSHAGNPQEALAQQSEQ
JGI20194J14741_1002600	JGI20194J14741_10026002	F055961	MPARRPRPSCHLAWRRLVNKPSGDFVMLSLSLMTERDCLLPLCCHSKSAHCTEAECWSCAFLGRNMXQALVYQAVDPACSRVGRATQTAGTFLAVLCLFFGAAFAATVPASLEKRIVYLFFVGLVPALGFYVSGHILRQMLGLSCKLCEIIAARCVRLLAPFANGLVNWAGASVLDALDRCSMKIARCLLTTGQCMQRLFRLGQKAHCWVHRRYWHVHKAIFEFSCLLIRNTARFVIRMQHSVGR*
JGI20194J14741_1002880	JGI20194J14741_10028803	F072634	LKDLLAKEKVTVGQSSIFRFLHHLNLRFKKKSAGRRAGPAGRHRRT*
JGI20194J14741_1003268	JGI20194J14741_10032683	F044109	MVERTIIIHQDLPVLAANSLKLRHKPLEIAGRQGA*
JGI20194J14741_1003405	JGI20194J14741_10034053	F024681	MRMSTFMNWLFHRGRTDGGSGEGTRTSRPLMEEDAGQERPMASLTAEGGPGTGLTQPSAGPLFIGFEALAHRLSALLKGLTPVHEKAALVTFVGTGITNPNRYEDAAAAFKQLRLMAPTHEGALVQVFTHQLREESQGNDFLYVHFAGDPLSFGFLICALTGGGLMAGWKLG*
JGI20194J14741_1003585	JGI20194J14741_10035851	F003565	PDGAYYQWRKIPPRELSIDLVADERLVWATERAEAS*
JGI20194J14741_1003871	JGI20194J14741_10038711	F069413	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAGF
JGI20194J14741_1003996	JGI20194J14741_10039965	F055962	MSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRTAERLGVPRATLE
JGI20194J14741_1004538	JGI20194J14741_10045383	F024640	MMQKSQLEGDLKVGDRVRLIAETLGWRAEMTLQGQIGEVIERRDDGRVTVRFDNGRLLMAREPESFELVPGAQGLKAKK*
JGI20194J14741_1004830	JGI20194J14741_10048303	F039401	KAYATGIIRADDLNDFVDALLADPDLGPGLRALNDASDAEPDITILQLAEVASRVLQLINRGLGRIAIVAQSRATYRVSKTFSVLLRALGIDVEVFTELCAAEAWLEDSSGSSDTGETPLPR*
JGI20194J14741_1004875	JGI20194J14741_10048752	F027693	MGMSSNDEPTLGELILAQVRGVESEMLLRPADFVKDFVSLPKVSRPAGSVALDFTCDLHAGRLIRLWMSFQAGDTRFGGEGVKGTWDTDTSGCGAVVVRCTRQGCRRSARLTNEWLVASFRQVQADFEAGKGLPIGWFPLSQVGGPGL*
JGI20194J14741_1004878	JGI20194J14741_10048781	F035030	MKPLSWDKQLGLVSPLKHAASQSNETNNPSKNETGLDVSHHTHVSPEGRGKYFFLDILFHRMSV
JGI20194J14741_1005335	JGI20194J14741_10053354	F076660	MDAQKTYVLWLNRNTEEQAFSGRGARARQVPGHLSAEVRAALANTDLPMCTTRS*
JGI20194J14741_1005794	JGI20194J14741_10057941	F017762	SRSEFCRQHDLSLSTLSRYCPHARRHRDALPRASMSKSLSAAELPLARVEFVEKSATHTEQHDPLLVELAGGRRIAVSAGFDAATLTRLIAVLEQA*
JGI20194J14741_1005951	JGI20194J14741_10059511	F021023	PRLNGHVLVCEVSAMSQDKTIPVSVIAFRAEDYSPDGKNVIISLTTKYSIADRKFSVPIECFHDLIGDLQRLNAAASATSIEAPIQPAVAPSPVGDQNRLSIAV*
JGI20194J14741_1006013	JGI20194J14741_10060131	F064046	MSASVKVFGCRPHEGGAARTGAGVRKPPMEETAGCVARWRVRRYGNLTAVVPECEHNFCDMARTLRMGENTFRRSCDFKELRVEKGHILQLVRYVPD
JGI20194J14741_1006222	JGI20194J14741_10062221	F012694	MADKIKNPHNRVDHSANGTFLAFWNGRLVYENGRVKRFETEREAWEFLSHCDLA
JGI20194J14741_1006271	JGI20194J14741_10062711	F032019	AIRQIAKREGFSLEKHGEDSYRLINERLNVIVFGLDGVPLETIASFLEKPESLANSPDAHHR*
JGI20194J14741_1006632	JGI20194J14741_10066321	F072806	MGRTESLNLKNDYERACGWYGHFNKSEMALFSECTDRYAQKLLDTADIVREAIFR
JGI20194J14741_1007202	JGI20194J14741_10072021	F001823	MRAYDRDLIRGGHYGQRPRVPHLKAEHMAAPTNAANV
JGI20194J14741_1007817	JGI20194J14741_10078173	F098285	MNLKLIVAILVIAAVPMFAQAQKPSAANVTKADAQKVVKMISGDKAKTQTYCDMAKLGDQIEQANEKKETKKADELSQKMDELGKKLGPEYVALMDGLQEMDPNSQDGQEIGSTLEALDKLCAK*
JGI20194J14741_1007890	JGI20194J14741_10078902	F016092	MTFAKKLKKTRLRGERLTFARTKSIDPITSARVEFALSTLAASGKLKGSRTERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
JGI20194J14741_1007910	JGI20194J14741_10079103	F021023	MSQDKAIPVSVIAMRADDYSPDCKSVIISLTTKYSTAERKFSVPVECFHDLIVDLQRLNAAASATSIETPIQPAVAPNPADDLNRLTIAA*
JGI20194J14741_1008367	JGI20194J14741_10083672	F026622	MRADANIADGDTXLAALMHETAAATVDTVLAESEWLSSQDAAAYTGYSEQQFSDFVMRRVAPKSALFSRNARRFKRSDIDAWCAAGGPSPYSSKGGPGAVRR*
JGI20194J14741_1008889	JGI20194J14741_10088891	F044817	MASLQPPPTLPPLRPGVELSSVRIPEFVRFAALAGSLGAVLSACREVAPAFGPNIPLARQNAEEFFYSVGSRFTNIQRSPRILRARAQFGHYALTPS
JGI20194J14741_1009704	JGI20194J14741_10097041	F050579	MKKQPDKTPIKSLRDAYQVSGFRVRARIDSYDELEHPAFVITLDRRSKKRSAADVGRFAAAATTNGGDGRAILDAAIGKSISIFTCAA*
JGI20194J14741_1009727	JGI20194J14741_10097272	F038917	MEPNDLPIVCIPLELPDQAAADLLEFLQNLTETLERHYFSQLHRLDQARRARNPDPESPFDRP
JGI20194J14741_1009746	JGI20194J14741_10097463	F098318	MTRVTRYTGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
JGI20194J14741_1010081	JGI20194J14741_10100811	F073982	ALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPQRTFRATTIIDSHQ*
JGI20194J14741_1010310	JGI20194J14741_10103101	F066026	HVMTRHIKKNEQEKEAEVVRLRTPPRKIWIDLMTGQICDPEPIAHGGQVIPFTAPSSRLRRKNKAKDKQIAK*
JGI20194J14741_1011624	JGI20194J14741_10116242	F001962	VILKSETYNFHRLDLTRQAGFIVTIYDEDGLRLAATIPFSTPAEAFAEARKIVDNKVEGPRK*
JGI20194J14741_1011630	JGI20194J14741_10116302	F026747	LQAVTRVKLEQASKAAMWTPTRRTNGEGRDDWEEPGAGARYRITVRTSRSTGVVSTACKEGNLRQWGRPGMVGESRAPNVIFGMTDHLGVGEGQMYPRNRAMPVEGRTLASGELAKKERSGDWR*
JGI20194J14741_1011747	JGI20194J14741_10117472	F012694	MTDEIKNPSNRVDRSXXGMFHAFWREQMVYENGRVKRFETEGEAWKYLARCDFAGKIIH*
JGI20194J14741_1011810	JGI20194J14741_10118103	F065994	MPAERRGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVSDSG*
JGI20194J14741_1012093	JGI20194J14741_10120932	F014525	MKQLQLFIRAAATLALLYAGAPFLSERASAQVFDFGQIDAFESMGTGTQRGGSPPKTIVDDGDWHTVFFTILESDSDAKIYWKSKDGDQTTIIHGPSVKAFQTAGQFKIEALGNENDSFKYGYVLFRLKNSKGEKT*
JGI20194J14741_1012550	JGI20194J14741_10125502	F021023	MSDNKTIPISVIALRADDYSPDGKNVIISLTTTYSTAERKYSVPVECFHDFIVDLQRLNAAASATSIETPIQPALAPAVS*
JGI20194J14741_1012749	JGI20194J14741_10127492	F021632	MIALASPLEPRQISRDFQGAMPAVEPVAFVARIIREGLETAHYPEYTRLIALPDDWLVQQIGLAKAVPDDVWI
JGI20194J14741_1012756	JGI20194J14741_10127562	F106171	MADNDDGPENDITDPTSEENGDVHHRFVELWNERTSGDAGAIALDSAWQPIANLLENHAGAQVEGADPVLLREGSDGATEGTNDAQPAEEERD
JGI20194J14741_1013215	JGI20194J14741_10132151	F019258	LTSWWHMDVENLILEDDARGYFENMSDLDTFIVVGVDDGDIFYGCAVNPDIDLGREFGALGWCVQLVTRIEDLGFDQAMVTDGWQHRGDGRWQLWGRAVELPPLD*
JGI20194J14741_1013328	JGI20194J14741_10133281	F013130	NMSSKTATKDKRRRTTMVPVTTMVEIPVLSEKERTDLLTSLKKAEVRAKANKTTDYNPKTFKDRLIGIYRGGKP*
JGI20194J14741_1013328	JGI20194J14741_10133282	F070394	MAFRVRIDPVALRQIDQFAVYLRDYSEEFAIEQIERLDRILSLNLGESPLTWGYFPLTGAPYRAYLFSVGRRTQYWIIYTVDEDTSTVDILSFWNSSRDPDKIEL*
JGI20194J14741_1013607	JGI20194J14741_10136072	F071790	MXNGNPRSTGKPTTPDEHDDLLDCRMAMLGLDAIESGDGDTFDEIRRRCTSCGYREACAVDLKRDPNNPVWQTYCPNS
JGI20194J14741_1014505	JGI20194J14741_10145052	F001823	AIDRDLIRGGHYGKRPRLPHSQAEHMAAPTNAAYVKKALANSEPSTHGT*
JGI20194J14741_1014609	JGI20194J14741_10146091	F097844	VRSPLDLLNKIIGAVIAYGPKNKTMKARKARKAARRKKVAER
JGI20194J14741_1015877	JGI20194J14741_10158771	F015418	LSIRQQLFGGAMSIVSRRTFTKGLLASALVPGHSAIGQPNDPGSIAIIDTPHNAAKVASKLAAQNVKV
JGI20194J14741_1017090	JGI20194J14741_10170901	F013130	SSKTATKDKRRRTTMVPVTTMVEIPVLSEKERTELLTSLKKAEVRAKANKATDYDPKTFKDRLIGIYRGGKR*
JGI20194J14741_1017090	JGI20194J14741_10170902	F070394	MAFRIRIDPVALRQIDQFAVYLRDYSEDFAIEQIERLDRILSLNLAXQSPLTWGYFPLTGAPYRAYLFSVGRRTQYWIIYTVDEDTSTVDILSFWNSSRDPDTIEL*
JGI20194J14741_1017279	JGI20194J14741_10172792	F012694	MADTMKNPSNRVDRSANGIFYAFWREQMVYENGRVKRFETEREAWEYLARCDLAGKIIH*
JGI20194J14741_1018241	JGI20194J14741_10182412	F004745	SINAVRNKLKQAILYIERNPETVKSITSFPYIVKSL*
JGI20194J14741_1019188	JGI20194J14741_10191882	F012694	MTDETKNPSNRVDPSTGGKFHAFWRGRVVFENGRVKRFETENEAWEFLACCDAAGKIIH*TEAASVGGLF
JGI20194J14741_1019255	JGI20194J14741_10192551	F007147	MLRQRRDQTMVKRAAKNDGVRRCLAGGVVVFLWTVSLQVRALAENDLLQKAVNYLFTGRTDPQDIPEILDRKSCVVVVPDAKSKQYVRYYLGRFRMDTALIDKTYAGSDTAYNLDIKGAEVIVEYLDIDKSTVLHGYKSAHISLPGDIDQTNKA
JGI20194J14741_1021143	JGI20194J14741_10211431	F033646	AARIVSGIPAPQMFGSLRSQGALLRHALPFYVSSWWRRGDLSWVMYLNAFVLLLVAATSLFGQLPGAAGQVAQRLAGGSALQAGLLLPLFFMSFALLESIKSSIGIWWEKAQGSLEVLLYTPVDDPSLIWLEVLPGAVVSTVWVTLWMAAGMAFLSLFGETAPWDLLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001383: Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences