Sample 3300001083

3300001083: Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1

Overview

Basic Information
IMG/M Taxon OID	3300001083 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0071004 \| Gp0055403 \| Ga0003001
Sample Name	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	29759307
Sequencing Scaffolds	58
Novel Protein Genes	63
Associated Families	62

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
All Organisms → cellular organisms → Bacteria	17
Not Available	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	8
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Forest Soil Microbial Communities From Multiple Locations In Canada And Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Multiple Locations In Canada And Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	coniferous forest biome → land → spruce forest soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Thunder Bay, Ontario, Canada
Coordinates	Lat. (^o)	49.08	Long. (^o)	-89.38	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000380	Metagenome / Metatranscriptome	1210	Y
F000915	Metagenome / Metatranscriptome	836	Y
F000969	Metagenome / Metatranscriptome	818	Y
F001114	Metagenome / Metatranscriptome	774	Y
F001528	Metagenome / Metatranscriptome	677	Y
F001822	Metagenome / Metatranscriptome	630	Y
F002154	Metagenome / Metatranscriptome	589	Y
F002396	Metagenome / Metatranscriptome	564	Y
F002427	Metagenome / Metatranscriptome	560	Y
F002981	Metagenome / Metatranscriptome	516	Y
F003157	Metagenome / Metatranscriptome	504	Y
F003254	Metagenome / Metatranscriptome	497	Y
F005888	Metagenome / Metatranscriptome	387	Y
F007555	Metagenome / Metatranscriptome	349	Y
F008004	Metagenome / Metatranscriptome	341	Y
F008314	Metagenome / Metatranscriptome	335	Y
F009040	Metagenome / Metatranscriptome	324	Y
F009484	Metagenome / Metatranscriptome	317	Y
F010406	Metagenome	304	Y
F010931	Metagenome / Metatranscriptome	297	Y
F011792	Metagenome / Metatranscriptome	287	Y
F012620	Metagenome / Metatranscriptome	279	Y
F014301	Metagenome / Metatranscriptome	264	N
F014678	Metagenome / Metatranscriptome	261	Y
F015003	Metagenome / Metatranscriptome	258	Y
F017314	Metagenome / Metatranscriptome	241	Y
F018805	Metagenome / Metatranscriptome	233	Y
F019413	Metagenome	230	Y
F020472	Metagenome / Metatranscriptome	224	Y
F024618	Metagenome / Metatranscriptome	205	Y
F025375	Metagenome / Metatranscriptome	202	Y
F026119	Metagenome / Metatranscriptome	199	Y
F028632	Metagenome / Metatranscriptome	191	Y
F030583	Metagenome / Metatranscriptome	185	Y
F031579	Metagenome / Metatranscriptome	182	Y
F031804	Metagenome / Metatranscriptome	181	Y
F033191	Metagenome / Metatranscriptome	178	Y
F033929	Metagenome / Metatranscriptome	176	Y
F039263	Metagenome / Metatranscriptome	164	Y
F041178	Metagenome / Metatranscriptome	160	N
F044710	Metagenome / Metatranscriptome	154	N
F045294	Metagenome / Metatranscriptome	153	Y
F048440	Metagenome / Metatranscriptome	148	Y
F049783	Metagenome / Metatranscriptome	146	Y
F050579	Metagenome / Metatranscriptome	145	Y
F059050	Metagenome / Metatranscriptome	134	Y
F068031	Metagenome / Metatranscriptome	125	Y
F070366	Metagenome / Metatranscriptome	123	Y
F073959	Metagenome / Metatranscriptome	120	Y
F073982	Metagenome / Metatranscriptome	120	N
F076550	Metagenome / Metatranscriptome	118	Y
F083109	Metagenome / Metatranscriptome	113	Y
F088389	Metagenome / Metatranscriptome	109	Y
F088402	Metagenome / Metatranscriptome	109	Y
F088998	Metagenome / Metatranscriptome	109	Y
F089355	Metagenome	109	Y
F090677	Metagenome / Metatranscriptome	108	Y
F094588	Metagenome	106	N
F097963	Metagenome / Metatranscriptome	104	Y
F097983	Metagenome / Metatranscriptome	104	Y
F101568	Metagenome	102	Y
F106049	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI12678J13193_1000062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4422	Open in IMG/M
JGI12678J13193_1000261	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
JGI12678J13193_1000337	Not Available	2499	Open in IMG/M
JGI12678J13193_1000416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2293	Open in IMG/M
JGI12678J13193_1000445	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
JGI12678J13193_1000565	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
JGI12678J13193_1000619	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
JGI12678J13193_1000624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1938	Open in IMG/M
JGI12678J13193_1000778	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
JGI12678J13193_1000833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1689	Open in IMG/M
JGI12678J13193_1000919	Not Available	1590	Open in IMG/M
JGI12678J13193_1001130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1435	Open in IMG/M
JGI12678J13193_1001491	Not Available	1223	Open in IMG/M
JGI12678J13193_1001525	All Organisms → cellular organisms → Bacteria → Acidobacteria	1201	Open in IMG/M
JGI12678J13193_1001677	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
JGI12678J13193_1001727	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
JGI12678J13193_1001798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
JGI12678J13193_1002005	Not Available	990	Open in IMG/M
JGI12678J13193_1002052	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
JGI12678J13193_1002219	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
JGI12678J13193_1002467	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
JGI12678J13193_1002684	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
JGI12678J13193_1002796	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
JGI12678J13193_1002797	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
JGI12678J13193_1003105	Not Available	718	Open in IMG/M
JGI12678J13193_1003112	Not Available	717	Open in IMG/M
JGI12678J13193_1003207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
JGI12678J13193_1003302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
JGI12678J13193_1003581	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
JGI12678J13193_1003714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	651	Open in IMG/M
JGI12678J13193_1003725	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
JGI12678J13193_1003738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	649	Open in IMG/M
JGI12678J13193_1003787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	644	Open in IMG/M
JGI12678J13193_1003821	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
JGI12678J13193_1003875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	635	Open in IMG/M
JGI12678J13193_1003897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
JGI12678J13193_1003969	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
JGI12678J13193_1004039	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
JGI12678J13193_1004375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
JGI12678J13193_1004384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
JGI12678J13193_1004444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
JGI12678J13193_1004496	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
JGI12678J13193_1004534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	587	Open in IMG/M
JGI12678J13193_1004548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	586	Open in IMG/M
JGI12678J13193_1004615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
JGI12678J13193_1004681	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
JGI12678J13193_1005064	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
JGI12678J13193_1005076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
JGI12678J13193_1005137	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
JGI12678J13193_1005630	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
JGI12678J13193_1005890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
JGI12678J13193_1006016	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
JGI12678J13193_1006081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	516	Open in IMG/M
JGI12678J13193_1006339	Not Available	508	Open in IMG/M
JGI12678J13193_1006370	Not Available	507	Open in IMG/M
JGI12678J13193_1006535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	502	Open in IMG/M
JGI12678J13193_1006550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	501	Open in IMG/M
JGI12678J13193_1006565	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI12678J13193_1000062	JGI12678J13193_10000624	F008314	MAEHPGAGQAGSEQAADRPTFPSYEEFASDLLEAVDAAGLSIEDVRHHLEPGLGERRFECTVRLTGDPPPRYHVHVSYTWDALLTFISAYGPGADCELYHDDDEAQDCPHQQITPQAFVDVEAEFVLGDGGYELHDLDEVGGWVETVQTLLGKAFSDDDKPSVHVGIAVLGTTTLVEKFTAEHSWFLDFEKQPDLANVAKQIDAALKLVPQLADRLPI*
JGI12678J13193_1000261	JGI12678J13193_10002613	F068031	INENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
JGI12678J13193_1000337	JGI12678J13193_10003372	F001528	PMSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVVFECIRKLFSFVQRRPSVREYRGGVTTFRAS*
JGI12678J13193_1000416	JGI12678J13193_10004161	F014678	MIGSFRIERRGACSEIGFDHVGDDGARLGKIERCDSRIHLVETL
JGI12678J13193_1000445	JGI12678J13193_10004453	F033929	MPRGILSRRSDTGQISWGKLSRLPRTVAESTLRIFDGYGLRGTLPARPMLAPCIRFLSIDSRVCSMLPSDTASRR*
JGI12678J13193_1000565	JGI12678J13193_10005652	F070366	MTDYTDNTRKATAEIAEGLRQTTEIKLAATEVLKSLTSIMVPLSVFALPNSEQLIPAIDAVVDRNFDMVTKLVEWQYEFGIAALNQLGSVASN*
JGI12678J13193_1000619	JGI12678J13193_10006191	F048440	MVATERRGRATGRVEASGQSPPLGGRATLQAVTRVKLEQAPKVKSWMPTRPLTGEGRADREETDKHLFGPPG*
JGI12678J13193_1000624	JGI12678J13193_10006244	F094588	HNRCGGCDGQAPVGTRITYDRLERHPYHPGCAWVAIEQPPWLIPVLAGDAPAPGQVIAHPSYGWLVCVRVAGRTWADNGVSAGSVVGVAARRALPEEIELAQWRAYAGIGDEAEWSWLQPEHVGDIVDSVAEFTGWPITRMAREPAQFVAPHPGGLLVFGEVTPLDETERWIAADPEERSLYQRGYRWCRCYSVQCLAGEEGHVHLGSVIPVTRTQFDAANQRGWSLH*
JGI12678J13193_1000778	JGI12678J13193_10007783	F090677	MAGSGQAPTPYDGMGTPTRWDMRTQDDGAPAERFDAVRSERFAPGTTRAHDESDDFVRRSLRRYYQ*
JGI12678J13193_1000833	JGI12678J13193_10008331	F020472	AATRPSGSGTTPNSLPDYTYRPVPYNSVPAPIQNNNGTLSNPNVGLSLPACPAGQTGYFVYDSNGNSLGIVCVPNPTDSLLPPTTPEIALADQASSKQPWPTLVMGINPGTGLTGLPSWFWLGGGSAAMPDAAASSGPLTVRVRARLVGVSWEFGDGIGYDSIDLGQAYPAQSDVQHVYQTDTYRLSNGYTAAAVLRYLVTYSVNGGPWLTLGVKTKPYSQPYSVYQVQPEAIGAP*
JGI12678J13193_1000919	JGI12678J13193_10009192	F073959	MGGMFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK*
JGI12678J13193_1001130	JGI12678J13193_10011301	F041178	VNAEQASHDEGLVKGSHHGDIERSPVASVSKVQAHLRDAARFRARSTSHAVAAHSSCTKIPLSAGRAQEDENHSRKRHFRPWLATVRLPGSARTDQVLGDDGITLVYSLGNLHRNAFDNDTGGHVFPERDQ*
JGI12678J13193_1001491	JGI12678J13193_10014912	F050579	MKKQPDKTPIKSLRDAYKVSGFCVRSKIDSYDELEHPAFVITLDRRSKKRCAAGAGKSAAAFTTNAGDGRAILAAAIGKSISIFPCAA*
JGI12678J13193_1001525	JGI12678J13193_10015252	F001114	MSDQRGFVSADEFHPDPYTQSRTAERTLNSAILHAEITRSYEEYLEIFDEFYADDIEGSSETIKEPIRGKARVRSLLLTFMVPLHAMAEVGGVSISIRERAIPGDVTDETHSAWTLELVGVSGKICTVSWRTFRKWNESRVVLEHHYDHQQSGEPLTHDDLRFDAPEPAIGFQRPS*
JGI12678J13193_1001677	JGI12678J13193_10016771	F031804	MTLKIEKYSDGNSTTIRLIGRMQADHLEELEKQIRESGP
JGI12678J13193_1001727	JGI12678J13193_10017271	F097963	MVLSAPATSAQLGLLLHAAVVMTALKLSAKFSTCDRAMKAACS
JGI12678J13193_1001798	JGI12678J13193_10017981	F025375	MSSWPFLFAAALAIWLLLKGPAAKTPLFVQIVCRIAIVFFAYCGVLYLLKWDPFWKWMLSTGFENRNNAEGFLILAS
JGI12678J13193_1002005	JGI12678J13193_10020052	F030583	MRGEVTNRAVLGRKRHGRPEHPIYRMLSGGNDLGGSKLGGLKIIK*
JGI12678J13193_1002052	JGI12678J13193_10020521	F000380	VHFTKQNSLDEPVQVAFSVTDDQGKEEIITGEVPYSYDLFHLFQENGWLNVRRGVSSIRETRSQRKIMSA*
JGI12678J13193_1002219	JGI12678J13193_10022191	F076550	YDAELQGKHRARTVICSDTWVNDSGTWKTASTHCSLVKGQ*
JGI12678J13193_1002467	JGI12678J13193_10024672	F026119	LLSLTRTEEELVPVDVPVQAELVSLMAHILVTVFQTEVRRTDERASIQPQDHAGTSGT*
JGI12678J13193_1002684	JGI12678J13193_10026842	F088389	MADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCIMDVSTDE
JGI12678J13193_1002796	JGI12678J13193_10027962	F014301	QLTLALLELPAPPAMPGVRLDPEARAKAIEILARMIAQTLPTSTQPQNEVADE*
JGI12678J13193_1002797	JGI12678J13193_10027971	F000915	MRTPMIDEHNLVLFSRSEGDAYQSSKAAELSLNAAILRAEISRSYEEFLDIFETFYADDVEVSREDLQEMIRGKARVRPFLLNVLVPLHVMAEVAGLSISVQQTAVPGDTANETHSAWRIDFTGVGGRRCTLKWYATRRWNASRVVYEHHYDLQQIGGPLTMDDLNLGSGGSDVSI*
JGI12678J13193_1003105	JGI12678J13193_10031052	F033191	MSAIGILVRRDSAVKLIDGLAGESPASASCPVGTVVISGDGAGDQTVGSPDVKVLDGWT*
JGI12678J13193_1003112	JGI12678J13193_10031121	F003157	MFDPDANQKRENTDLLGFARFGGLDRLDWLMILISVLLGTIAKQHHVLDLPDWFLEWVSPFLLMAFGYKARRKITEVVESRRDRRKDTREE*
JGI12678J13193_1003112	JGI12678J13193_10031122	F002396	MRSLFPSTYDRADVLMSAGCSTFVSAALILVIPRVGIVLLEILLGLFFIGCALAARARLRIQARSQAKEGPEGSTNAKAKWFDRYDVLMILTVIVIYSSMSGLLRHAGLSEGTVGILPLILFAAGILLKPRAVQFIER
JGI12678J13193_1003207	JGI12678J13193_10032071	F089355	MPKKSLTREAKFPKMALVVHSDVGVLSNLQSSLSDKGFTPIIARDLPTALLAITQHYFDLAIVSSRLREGGDGWPLAGVLHLVFPHAFVSVLAPSEDVLTLQSAINYGVKEVYKESSPAADVVSAIMAAVNQGSAKGKPRLQ*
JGI12678J13193_1003302	JGI12678J13193_10033021	F049783	MGELSTSINDALLAVDLNTVELVTLQSRQKQTGRETQVVILNRLRKRIHDVAKKRNCSMNQLVNSALLVFY
JGI12678J13193_1003581	JGI12678J13193_10035812	F039263	MENVQRENGSIRPVERYDVGHVQEVIRQAHGELHQLLQQRAEIMKRIGTVKQTISGLANLFGDGLLSEELMEL
JGI12678J13193_1003611	JGI12678J13193_10036112	F073982	MAFDQSGPRWLGISDLIAEPEGPAFISYKVARSRLNRLRFVTQDP
JGI12678J13193_1003714	JGI12678J13193_10037142	F073959	VSGVFDFAVFAIGRADQADRITAVALNFEMKGKRFAFDGY*
JGI12678J13193_1003725	JGI12678J13193_10037251	F028632	TVESHTHSGNRTLDSQSVQRRGSSGQFEPYQDVEKEAVKLDANTVRTTTRTYGRDSDGAKTLLQVTEEEKHNLPGGGSNVVRSTSNPDANGDLQLVQRQIEETKKISKDVEETKTTVMLPSINGGVAPAMQVEERRERGANDTVQSQKTTLLPDGAGHWQVGEVQRSTIKQEGKSRSTEEQISRPDSEDNMGEVSRTVSKAAESASGEKRDTVETY
JGI12678J13193_1003738	JGI12678J13193_10037382	F007555	VAIINKGELRGVGKVADLTSTVQGKVDLVWQGTQVPASMKALGAECHVSGDTVRAVIAETQQDAAIDALRRERLRLISITPVRTSLEQYFVEKLGRAETAATGGVA*
JGI12678J13193_1003787	JGI12678J13193_10037871	F018805	MQQPDFLQFIFKAINDLLTQNLGFFDAMGQNLFRAFATILISWY
JGI12678J13193_1003821	JGI12678J13193_10038212	F106049	MLSTVEVGTILMKEWPGMTQLLGLESEPCSGEWGRLKVLDGFALDRKIHAAGW
JGI12678J13193_1003875	JGI12678J13193_10038752	F045294	MGIDGESSHPELCSEVADGVTRNIVCLFREPDAVTPPVRFDKRGCGNVAW*
JGI12678J13193_1003897	JGI12678J13193_10038971	F003254	MVLAFFEKWLDGCLRSRVVELRTFCIMLRNGIAQFVGSWVSESGYHLRIKKVDEDRALVDFLDPRAAPVQRPYMGGAPSLKMFAHYDSNGIFEVDLWQEGKGFILDLTHEYDYELDPERREALVPALSRNERDHFLDACYSLFGPLDHFVRRKAQNKRL*
JGI12678J13193_1003969	JGI12678J13193_10039691	F011792	NQLVNSALVVFYSKGGESKLKKPAKGRGSSVHSYDTMTEAERRELHQMLAELSAMQSVPFEAEEPNGSYYEYDRNLKATVKVTPDGERTPVEKLETGFEPARGKAPRKIAREEITT*
JGI12678J13193_1004039	JGI12678J13193_10040392	F024618	MTLQALLVSTDDQAAEVLGRVLPLFGIAMDRCSDPETTTARIHAQ
JGI12678J13193_1004264	JGI12678J13193_10042642	F101568	ERSQIYESILGFVTGIAGAYGGSVARRGLRELFGK*
JGI12678J13193_1004375	JGI12678J13193_10043752	F002154	RCSLDRLSAERCLGGPSRSCHGEGNRQRSGPERLLDLSGVAGGGTFPKKNAEQERPYLAAQSGKDRGYKAGRLKARGAGRESEGLVVPGKACKTTRWREGVLL*
JGI12678J13193_1004384	JGI12678J13193_10043841	F088998	DPSTVRRWAGRLLQLGTLLGAKLWQATSWSASTPPTILAWDWTAIRCILPIEARSP*
JGI12678J13193_1004444	JGI12678J13193_10044441	F010931	MAKAYRTDVLSKKKFQEEVQQSRRALEPERVPCPEPGCECTYEMYGCKPANLVEYVATLQDRVKREHPDHTSEVLAVNEFRKVPK*
JGI12678J13193_1004496	JGI12678J13193_10044961	F008004	HAAVVASLGSKALGPFLSDLIQLTLGIVLICSVVAASRRSEGMALSFWRLTAFAYGVWFVAQGFSVYHDVAASPVVSGIENFLFCFWFAPLAMAIFLDPDTESGELDALVALDFVQAVLVCVAAYLYFFYIPKSESGEMAHSVWAPYFAGYGLVALSFILRGAISRTRDARILFGRMGMFLAVSGCVDALYYYGP
JGI12678J13193_1004534	JGI12678J13193_10045341	F002427	MSAQGSAPRATLDLKVRVWGMGANNQPFFQNAMAQNVSVTGACLYGIEPELKVGDVIGVQYEGKKARCKVVWVVDAGALKKTQVGVQLVADQDCPWAAALPSD
JGI12678J13193_1004534	JGI12678J13193_10045342	F088402	RLRQSRETELHVLTLPAARELLMQQDIELISYRELVDKPFSR*
JGI12678J13193_1004548	JGI12678J13193_10045482	F059050	AGMTVSPRAPRAGGRKAPRHEIAGWERRWCRNYGDFAAGSGVDVVERGGNVRNFATRHVHELNCERVTDRLCNAILRF*
JGI12678J13193_1004615	JGI12678J13193_10046151	F019413	VACLQLGRLCAGILPPYELSRELVLERTENTKQWLSSLAIPSGIRSTAFGIFGALSGLDPARCAIALTDLVKAASAQLDEASRSELAVLLQELSASPTTHARHTMTQSQPS*
JGI12678J13193_1004681	JGI12678J13193_10046812	F000969	MVNDDVVKCLLCGGFTHIEKTDLREALKNPRLREQVELYIAQLLKSPVEELTTVGATQAGHDFQKDVHSWNPCVPMWKRSPKE*
JGI12678J13193_1005064	JGI12678J13193_10050641	F002981	LDNVAAVEIPDQGSTMVALTFTLRNTSDKILYVHTLESTLKGPSGDSTADAVSAIDFDRYFQAFPSLKNGAQPALPPETKIHPGEVTTRTIIVAFPVTLDVFNQRKSLSVVIWPYDQTVPITLTK*
JGI12678J13193_1005076	JGI12678J13193_10050762	F009484	MTIGKRLYANFGVILTMVVVLLLVNLVAVQREHAAKAAAAASLQITDAT
JGI12678J13193_1005137	JGI12678J13193_10051371	F017314	VITSKGGASEPSDTLLPGKAGGTVAVRRTLASTICWIADPTQVPRPRQLRDVSAVMRSQPAHQSMINRRFDDRASCPAPKSLKQARKEATNSLACIW*
JGI12678J13193_1005630	JGI12678J13193_10056301	F031579	MIIDRRTANPIARLRPIPDTDRSELFYWSNVKERWTTFGNLGRMKLMLESAHEIVENDPMFRVPRSR*
JGI12678J13193_1005790	JGI12678J13193_10057901	F097983	TSDAVKLGDHVGHTVTITGVVSNAAMHGMKEDTKAEAKEHGVGKHSTEHGSMTVTALTMVSESCQK*
JGI12678J13193_1005890	JGI12678J13193_10058902	F009040	AAVVKSDGGERCGKVGTKIPIGMIERGERKRTVDEVSKAV*
JGI12678J13193_1006016	JGI12678J13193_10060162	F012620	DIPAPLYRKLKEQAAGTGSSIRELVLLGVRRVVLQAQRPRPKRVEFPLIVSKGPQVDLTNEQIYEHVEFP*
JGI12678J13193_1006081	JGI12678J13193_10060811	F010406	VRTLVFLLLLANLTLFAYIRLDSVGGGEGVRLSQQLQPEKIKLLTTQQVA
JGI12678J13193_1006339	JGI12678J13193_10063391	F005888	HMGELEFRGLDNSLMAKLRGAWKIRFGEVYDSTYLSEYLPAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK*
JGI12678J13193_1006370	JGI12678J13193_10063702	F083109	MVIMTLSGSLLSQESPITPRPERVQISEGPGVPLVGGYLTVIRWTVNNPGGL
JGI12678J13193_1006535	JGI12678J13193_10065352	F015003	VQIDSKTVEAYYRDKFVPELRRSGAKEVPLSDVSSKIREVLTSEKVSELLVSWLQTLRSEGEVRLPGASSSPGASPSMEQGEQSR*
JGI12678J13193_1006550	JGI12678J13193_10065502	F044710	MIVSLWVGRRGAPSKVGFDHVGDDGTRLGEVEGGDGRVHLVETLAAAQQFGIDRADLVEHLLQFAEVGEELGDLGVSCIGHVAEPRALAGSSDC
JGI12678J13193_1006565	JGI12678J13193_10065651	F001822	MDVLMLGRCSHEFSWPRRGGDGDYYQVCLLCAAEYKYDWSTMRRTERVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001083: Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences