Metagenome / Metatranscriptome Family F068031

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068031
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	56 residues
Representative Sequence	EFYMAPSATTINENGKHWQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Number of Associated Samples	113
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.94 %
% of genes near scaffold ends (potentially truncated)	68.00 %
% of genes from short scaffolds (< 2000 bps)	57.60 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (9.600 % of family members)
Environment Ontology (ENVO)	Unclassified (18.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF02371	Transposase_20	43.20
PF01548	DEDD_Tnp_IS110	27.20
PF00072	Response_reg	1.60
PF01522	Polysacc_deac_1	1.60
PF00582	Usp	0.80
PF01794	Ferric_reduct	0.80
PF14403	CP_ATPgrasp_2	0.80
PF04367	DUF502	0.80
PF12705	PDDEXK_1	0.80
PF00805	Pentapeptide	0.80
PF16363	GDP_Man_Dehyd	0.80
PF00486	Trans_reg_C	0.80
PF04134	DCC1-like	0.80
PF03544	TonB_C	0.80
PF15780	ASH	0.80
PF01435	Peptidase_M48	0.80
PF09825	BPL_N	0.80
PF03404	Mo-co_dimer	0.80
PF02350	Epimerase_2	0.80
PF02129	Peptidase_S15	0.80
PF13692	Glyco_trans_1_4	0.80
PF16640	Big_3_5	0.80
PF07676	PD40	0.80
PF00480	ROK	0.80
PF00069	Pkinase	0.80
PF01527	HTH_Tnp_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	70.40
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.20
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.60
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.60
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.80
COG2928	Uncharacterized membrane protein	Function unknown [S]	0.80
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.20 %
Unclassified	root	N/A	32.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.20 %
Unclassified	root	N/A	32.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.20 %
Unclassified	root	N/A	32.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.80 %
Unclassified	root	N/A	32.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.60 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	26.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.60 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.80 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.60 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.80 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	20.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.60 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.60 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	7.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.60 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.80 %
Candidatus Brocadia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia	0.80 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	7.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.60 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.80 %
Candidatus Brocadia sinica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	0.80 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001083\|JGI12678J13193_1000261	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
3300001137\|JGI12637J13337_1001472	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300001159\|JGI12650J13346_1000341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1691	Open in IMG/M
3300001180\|JGI12695J13573_1000528	Not Available	3537	Open in IMG/M
3300001593\|JGI12635J15846_10274825	Not Available	1067	Open in IMG/M
3300001664\|P5cmW16_1040934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	828	Open in IMG/M
3300002245\|JGIcombinedJ26739_100166734	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300003351\|JGI26346J50198_1001920	Not Available	1802	Open in IMG/M
3300004092\|Ga0062389_100129309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2323	Open in IMG/M
3300004268\|Ga0066398_10058879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	799	Open in IMG/M
3300004635\|Ga0062388_100013668	All Organisms → cellular organisms → Bacteria → Acidobacteria	4450	Open in IMG/M
3300005332\|Ga0066388_103832535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	767	Open in IMG/M
3300005471\|Ga0070698_102242055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	500	Open in IMG/M
3300005555\|Ga0066692_10474457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	797	Open in IMG/M
3300005591\|Ga0070761_10005502	All Organisms → cellular organisms → Bacteria → Acidobacteria	7398	Open in IMG/M
3300005602\|Ga0070762_10565738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	751	Open in IMG/M
3300006028\|Ga0070717_10000742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21257	Open in IMG/M
3300006028\|Ga0070717_10083178	Not Available	2691	Open in IMG/M
3300006052\|Ga0075029_100535427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	776	Open in IMG/M
3300006086\|Ga0075019_10682338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	648	Open in IMG/M
3300006086\|Ga0075019_10849539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	584	Open in IMG/M
3300006102\|Ga0075015_100088175	Not Available	1539	Open in IMG/M
3300006174\|Ga0075014_100014601	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300006606\|Ga0074062_11769841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	670	Open in IMG/M
3300006914\|Ga0075436_101508382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	511	Open in IMG/M
3300009839\|Ga0116223_10481658	Not Available	724	Open in IMG/M
3300010043\|Ga0126380_10028156	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300010048\|Ga0126373_10006338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9265	Open in IMG/M
3300010048\|Ga0126373_10548229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300010361\|Ga0126378_10013997	All Organisms → cellular organisms → Bacteria	6690	Open in IMG/M
3300010361\|Ga0126378_10021711	All Organisms → cellular organisms → Bacteria → Acidobacteria	5564	Open in IMG/M
3300012189\|Ga0137388_10180705	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300013770\|Ga0120123_1005597	All Organisms → cellular organisms → Bacteria	2345	Open in IMG/M
3300014158\|Ga0181521_10011006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8750	Open in IMG/M
3300014164\|Ga0181532_10118377	Not Available	1627	Open in IMG/M
3300014489\|Ga0182018_10001316	All Organisms → cellular organisms → Bacteria	28692	Open in IMG/M
3300014489\|Ga0182018_10130790	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300014491\|Ga0182014_10085819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1952	Open in IMG/M
3300014494\|Ga0182017_10143639	Not Available	1546	Open in IMG/M
3300014495\|Ga0182015_10000727	All Organisms → cellular organisms → Bacteria	46010	Open in IMG/M
3300014495\|Ga0182015_10157169	Not Available	1542	Open in IMG/M
3300014502\|Ga0182021_10572604	Not Available	1350	Open in IMG/M
3300014839\|Ga0182027_10133059	All Organisms → cellular organisms → Bacteria	2949	Open in IMG/M
3300015264\|Ga0137403_10038994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4971	Open in IMG/M
3300017822\|Ga0187802_10090282	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300017823\|Ga0187818_10066739	Not Available	1549	Open in IMG/M
3300017924\|Ga0187820_1004517	Not Available	3225	Open in IMG/M
3300017929\|Ga0187849_1096709	Not Available	1260	Open in IMG/M
3300017932\|Ga0187814_10010792	All Organisms → cellular organisms → Bacteria	3559	Open in IMG/M
3300017933\|Ga0187801_10027698	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300017934\|Ga0187803_10049972	Not Available	1651	Open in IMG/M
3300017935\|Ga0187848_10284225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	693	Open in IMG/M
3300017955\|Ga0187817_10041742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2808	Open in IMG/M
3300018033\|Ga0187867_10114448	Not Available	1564	Open in IMG/M
3300018034\|Ga0187863_10313070	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300018035\|Ga0187875_10050999	All Organisms → cellular organisms → Bacteria → Acidobacteria	2415	Open in IMG/M
3300018060\|Ga0187765_10651072	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300019888\|Ga0193751_1059908	Not Available	1596	Open in IMG/M
3300020001\|Ga0193731_1136004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	614	Open in IMG/M
3300020199\|Ga0179592_10520448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	508	Open in IMG/M
3300020583\|Ga0210401_10080081	All Organisms → cellular organisms → Bacteria	3074	Open in IMG/M
3300020583\|Ga0210401_10268830	Not Available	1564	Open in IMG/M
3300021088\|Ga0210404_10320130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	856	Open in IMG/M
3300021180\|Ga0210396_10014719	All Organisms → cellular organisms → Bacteria → Acidobacteria	7279	Open in IMG/M
3300021344\|Ga0193719_10298344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	676	Open in IMG/M
3300021478\|Ga0210402_10000237	All Organisms → cellular organisms → Bacteria	62986	Open in IMG/M
3300021559\|Ga0210409_10012187	All Organisms → cellular organisms → Bacteria	8582	Open in IMG/M
3300021560\|Ga0126371_13785795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	510	Open in IMG/M
3300022724\|Ga0242665_10398587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	502	Open in IMG/M
3300022734\|Ga0224571_106728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	769	Open in IMG/M
3300022835\|Ga0224537_1021784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	557	Open in IMG/M
3300023090\|Ga0224558_1035861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195	Open in IMG/M
3300023250\|Ga0224544_1003410	Not Available	2128	Open in IMG/M
3300024225\|Ga0224572_1005320	Not Available	2289	Open in IMG/M
3300024227\|Ga0228598_1000464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8262	Open in IMG/M
3300024233\|Ga0224521_1011412	Not Available	2072	Open in IMG/M
3300025915\|Ga0207693_10418111	Not Available	1048	Open in IMG/M
3300026318\|Ga0209471_1015267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3938	Open in IMG/M
3300026355\|Ga0257149_1046907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	622	Open in IMG/M
3300026451\|Ga0247845_1002608	All Organisms → cellular organisms → Bacteria	3079	Open in IMG/M
3300026467\|Ga0257154_1004149	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300026530\|Ga0209807_1047841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1987	Open in IMG/M
3300026532\|Ga0209160_1331300	Not Available	520	Open in IMG/M
3300026557\|Ga0179587_10240241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300026728\|Ga0208069_100250	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1101	Open in IMG/M
3300027034\|Ga0209730_1000067	All Organisms → cellular organisms → Bacteria	3730	Open in IMG/M
3300027326\|Ga0209731_1001007	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300027605\|Ga0209329_1028956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1143	Open in IMG/M
3300027629\|Ga0209422_1023202	Not Available	1539	Open in IMG/M
3300027645\|Ga0209117_1057016	Not Available	1141	Open in IMG/M
3300027667\|Ga0209009_1002852	All Organisms → cellular organisms → Bacteria	4367	Open in IMG/M
3300027698\|Ga0209446_1005991	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300027745\|Ga0209908_10010470	Not Available	1557	Open in IMG/M
3300027854\|Ga0209517_10581477	Not Available	596	Open in IMG/M
3300027894\|Ga0209068_10070794	Not Available	1800	Open in IMG/M
3300027905\|Ga0209415_10118157	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300027911\|Ga0209698_10229251	Not Available	1491	Open in IMG/M
3300028015\|Ga0265353_1000360	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300028069\|Ga0255358_1005182	Not Available	1747	Open in IMG/M
3300028536\|Ga0137415_10033301	All Organisms → cellular organisms → Bacteria	5063	Open in IMG/M
3300028747\|Ga0302219_10042399	Not Available	1699	Open in IMG/M
3300028759\|Ga0302224_10026689	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300028773\|Ga0302234_10057558	Not Available	1747	Open in IMG/M
3300028780\|Ga0302225_10033891	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300028806\|Ga0302221_10027019	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300028857\|Ga0302289_1155512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	525	Open in IMG/M
3300031090\|Ga0265760_10025786	Not Available	1718	Open in IMG/M
3300031128\|Ga0170823_17483771	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1091	Open in IMG/M
3300031233\|Ga0302307_10056100	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300031708\|Ga0310686_107541809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2030	Open in IMG/M
3300031708\|Ga0310686_109662356	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300031715\|Ga0307476_10892001	Not Available	656	Open in IMG/M
3300031718\|Ga0307474_10130120	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300031718\|Ga0307474_10292092	Not Available	1254	Open in IMG/M
3300031837\|Ga0302315_10099096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1894	Open in IMG/M
3300031962\|Ga0307479_10034188	All Organisms → cellular organisms → Bacteria	4855	Open in IMG/M
3300031962\|Ga0307479_10423108	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	1316	Open in IMG/M
3300032261\|Ga0306920_100343322	Not Available	2222	Open in IMG/M
3300032261\|Ga0306920_100689501	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300033433\|Ga0326726_10052904	Not Available	3554	Open in IMG/M
3300033433\|Ga0326726_11532771	Not Available	649	Open in IMG/M
3300033819\|Ga0334816_003421	Not Available	3146	Open in IMG/M
3300034070\|Ga0334822_005384	Not Available	3562	Open in IMG/M
3300034125\|Ga0370484_0213095	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.80%
Host-Associated	Host-Associated	3.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.00%
Aquatic	Environmental → Aquatic	20.80%
Plants	Host-Associated → Plants	3.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.60%
Freshwater	Environmental → Aquatic → Freshwater	15.20%
Peat	Environmental → Terrestrial → Peat	14.40%
Sediment	Environmental → Aquatic → Sediment	5.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.00%
Loam	Environmental → Terrestrial → Soil → Loam	16.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.20%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.40%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.40%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.80%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001083	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001159	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2	Environmental	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300022835	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E2 10-14	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026451	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026728	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN412 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028857	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12678J13193_10002613	3300001083	Forest Soil	INENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
JGI12637J13337_10014723	3300001137	Forest Soil	GCVTDNPYVTVSTRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
JGI12650J13346_10003412	3300001159	Forest Soil	AIRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
JGI12695J13573_10005284	3300001180	Forest Soil	MAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
JGI12635J15846_102748252	3300001593	Forest Soil	MAESATTINENGVRWQYAVLRRVVQRSSTLLVLESPWMSSTRDALWHNG
P5cmW16_10409341	3300001664	Permafrost	AVNRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
JGIcombinedJ26739_1001667343	3300002245	Forest Soil	MAPSATTINENGKHWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL*
JGI26346J50198_10019201	3300003351	Bog Forest Soil	KCPILPTVEIRXDEFCMAHSATTINENGNRWQYAVRGVWSRGLSTLLVRESPRMSLTRDALWHNGL*
Ga0062389_1001293095	3300004092	Bog Forest Soil	VGLSTGEIRWDEFYMAHGATTMNENGSGRQYAVLRRVVQRSALLVLESPWMSLTRDALWH
Ga0066398_100588791	3300004268	Tropical Forest Soil	LRWDEFYMAPSATTIDENGKHRQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL*
Ga0062388_1000136688	3300004635	Bog Forest Soil	MMICEWVGLSTGEIRWDEFYMAHGATTMNENGSGRQYAVLRRVVQRSALLVLESPWMSLTRDALWH
Ga0066388_1038325352	3300005332	Tropical Forest Soil	MADSATTINENGVRWQYAVPRRVIQRSSALLVLESPRMSLTRDALWHNGL*
Ga0070698_1022420551	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EFCMAESATTIHENGVRRQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0066692_104744571	3300005555	Soil	MERSNVATRWGEFCMAHSATTIDENGICWQYAVARRVVQRSSTLLALESPWMSLTRDALWHN
Ga0070761_100055024	3300005591	Soil	MAPSATTIDENGNGWQYAVPRRVVQRSSALLVLQSPRMSLTRDALWHNGL*
Ga0070762_105657382	3300005602	Soil	RWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
Ga0070717_100007422	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAESATTINENGVRWQYAVPRRVVPRSSTLLALESPWMSLARDALWHNGL*
Ga0070717_100831784	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAHSATTINENRICWQYAVARRVVQRSSTLLARQSPWMGLTRDALWHNGL
Ga0075029_1005354272	3300006052	Watersheds	DEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
Ga0075019_106823381	3300006086	Watersheds	VNKNEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL*
Ga0075019_108495392	3300006086	Watersheds	YQQSLMSIVETRWDEFCTAHSTTTINENGIRWQYAVPRRVVQRSSALLVLESPWMSLTRDALWHNGL*
Ga0075015_1000881751	3300006102	Watersheds	VVNRWDEFYMAPSATTIDENGKHWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL*
Ga0075014_1000146014	3300006174	Watersheds	MAPSATTIDENGKHWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL*
Ga0074062_117698412	3300006606	Soil	IVAEENNQIVAVIRWDEFCMAHSATTINENVVCWQYAMPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0075436_1015083822	3300006914	Populus Rhizosphere	TTINENGVRWQYAVPRRVVQRSSTLLVLESPWMSLTRDALWHNGL*
Ga0116124_10623992	3300009634	Peatland	NENGKDSQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0116223_104816581	3300009839	Peatlands Soil	TVVTRWDEFYMAPSATTINQNGICWQYAVPRRVVQRSSALRVLASPRMSLTRDGLWHKGL
Ga0126380_100281562	3300010043	Tropical Forest Soil	MAPGATTIDENGKHRQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL*
Ga0126373_100063388	3300010048	Tropical Forest Soil	MDEFCMAHNATTINENGVPWQYAVPRRVVQRSSTLLVLESPWMSLTRDALWHNGLSPL
Ga0126373_105482291	3300010048	Tropical Forest Soil	MAESATTINENGVRWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNG
Ga0126378_100139976	3300010361	Tropical Forest Soil	MAHSATTINENGICWQYAVPRRVIQRSSTLLALESPRMSLTRDALWHNGL*
Ga0126378_100217111	3300010361	Tropical Forest Soil	MAHSATTIDENGKHRQYAVPRRVVQRSSTLLAPESPRMSLTRDALWHNGL*
Ga0137388_101807053	3300012189	Vadose Zone Soil	APSATTINENGKHGQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0120123_10055973	3300013770	Permafrost	MMKKGVQFAVDVIRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL*
Ga0181521_100110061	3300014158	Bog	MAKSATTSNENGVLWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHN
Ga0181532_101183772	3300014164	Bog	VLDKSFYRSGDRWDEFYMAPSATTINENGKDSQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0182018_100013161	3300014489	Palsa	MAPSPTTINENGKRWRYAVPRRAVQRSSTLLVLESPRMSLTQDALWHNGL*
Ga0182018_101307901	3300014489	Palsa	MAKNATTINENGVRWQYAVPRRVVQRSSALLVLESPRMSLTRDALWHN
Ga0182014_100858193	3300014491	Bog	MVIRRRLDLVVYVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL*
Ga0182017_101436392	3300014494	Fen	VNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL*
Ga0182015_100007275	3300014495	Palsa	MAKNATTINENGVRWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0182015_101571691	3300014495	Palsa	IRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL*
Ga0182021_105726041	3300014502	Fen	RSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL*
Ga0182027_101330592	3300014839	Fen	MAPSATTINENGKYWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0137403_100389947	3300015264	Vadose Zone Soil	MAHSATTINENGVRWPYAVSRRVVQRSSTLLVLESPRMSLTRDALWHNGL*
Ga0187802_100902822	3300017822	Freshwater Sediment	MARSPTTINENGNRWQYAVPRRVVQRSSALLVLESPRMSLTRDA
Ga0187818_100667391	3300017823	Freshwater Sediment	RWDEFCMAHSATTINENGVPSQYAVPRRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0187820_10045174	3300017924	Freshwater Sediment	MAHSATTINENGVPSQYAVPRRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0187849_10967091	3300017929	Peatland	DEFYMAPSATTINENGKDSQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0187814_100107924	3300017932	Freshwater Sediment	MSIDETRWDEFCMAHSATTINENGVPSQYAVPRRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0187801_100276981	3300017933	Freshwater Sediment	EFCMAHSATTINENGVPSQYAVPRRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0187803_100499721	3300017934	Freshwater Sediment	VNRWDEFCMAHSATTINENGVRWQYAVPRRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0187848_102842251	3300017935	Peatland	AVLSGVFHGSSNITIMVIRRRLDLVVYVNRWDEFYTARSATTTNENGLCWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0187817_100417421	3300017955	Freshwater Sediment	MAHSATTINENGVLWQYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0187867_101144482	3300018033	Peatland	RWDEFYMAPSATTINENGKDSQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0187863_103130702	3300018034	Peatland	WDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0187875_100509993	3300018035	Peatland	VRRYHVNDTMILTGVTVENRWDEFYMAHSATTMNENGSRRQYAVARRVVQRSSALLVLKSPWMSLTRDALWYNGL
Ga0187765_106510721	3300018060	Tropical Peatland	MTEGTTWDEFCMAHSATTMNENGICWQYAVARRVVQRSSALLALESPWMSLTQDALWHNGLSPPRKRGAR
Ga0193751_10599081	3300019888	Soil	LQRVKLPPGNWIAPPGRWDEFYMAPSATTIDENGKHWQYAVARRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0193731_11360041	3300020001	Soil	RWDEFYMALSATTINENEKHWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0179592_105204481	3300020199	Vadose Zone Soil	FYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0210401_100800813	3300020583	Soil	MAHSATTINENGIGWQYAVPRRVVQRSSALLVLESPRMSLTRDALRHNGL
Ga0210401_102688301	3300020583	Soil	IVDAIRWDEFCTAHSATTINENGNRWQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNG
Ga0210404_103201301	3300021088	Soil	GKMRWDEFYMAHSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0210396_100147194	3300021180	Soil	MAHSATTINENRIGWQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0193719_102983442	3300021344	Soil	IASTVVTRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0210402_1000023711	3300021478	Soil	MVEDTRWDEFYMALSATTINENGKHWQCAVSRRVVQRSSTLLVLESPRMSLTRDALWHDG
Ga0210409_100121873	3300021559	Soil	MAHSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLAREVLDLA
Ga0126371_137857951	3300021560	Tropical Forest Soil	VLRWDEFYMAPSATTIDENGKHRQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL
Ga0242665_103985871	3300022724	Soil	TTINENGKHWQYAVARRVVQRSSTFLVLESPRMSLARDALWHNGL
Ga0224571_1067282	3300022734	Rhizosphere	AVVTRWDEFYMAPSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0224537_10217842	3300022835	Soil	YWSVYVNRWDEFYTERSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0224558_10358612	3300023090	Soil	MVIRRRLDLVVYVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0224544_10034102	3300023250	Soil	MAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0224572_10053204	3300024225	Rhizosphere	GRRVISTVEIRWDEFYMAPSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0228598_10004643	3300024227	Rhizosphere	MAPSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0224521_10114123	3300024233	Soil	VDLTREILIVDVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0207693_104181113	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAESATTINENGVRWQYAVPRRVIQRSSTLLVLESPRMSLTRDALWHN
Ga0209471_10152674	3300026318	Soil	MAESATTINENGVRWQYAVPRRVVQRSSTLLALESPWISLTRDALWHNGL
Ga0257149_10469071	3300026355	Soil	EFYMAPSATTINENGKHWQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0247845_10026083	3300026451	Soil	IVYVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNG
Ga0257154_10041493	3300026467	Soil	TIVDETRWDEFYMAPSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0209807_10478413	3300026530	Soil	MAHSATTINENGNRWQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0209160_13313001	3300026532	Soil	MAHSATTIDENGICWQYAVARRVVQRSSTLLALESPWMSLTRDALWHNGMSPPREGRA
Ga0179587_102402412	3300026557	Vadose Zone Soil	MAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0208069_1002501	3300026728	Soil	KITAILDETRWDEFYMTHNATTINEKGKHWQYAVPRGVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0209730_10000672	3300027034	Forest Soil	MAESATTINENGVRWQYAVPRRVVPRSSTLLALESPWMSLARDALWHNGL
Ga0209731_10010071	3300027326	Forest Soil	EIRWNEFYMAPSATTINENGVPWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0209329_10289561	3300027605	Forest Soil	LKKQSTEFSCPLTAIVVNRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLTRDAPGHNGL
Ga0209422_10232022	3300027629	Forest Soil	RWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0209117_10570161	3300027645	Forest Soil	VIIDDNRWDEFYMALSATTINENGKHWQYAVRRRVVQRSSTLLVLESPRMSLTRDALWH
Ga0209009_10028522	3300027667	Forest Soil	MAPSATTIDENGKHWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0209446_10059911	3300027698	Bog Forest Soil	GSSPTSIVETRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0209908_100104702	3300027745	Thawing Permafrost	IRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0209517_105814772	3300027854	Peatlands Soil	MAPSATTINENGKRWQYVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0209068_100707941	3300027894	Watersheds	SGRGIVVVVNRWDEFYMAPSATTIDENGKHWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL
Ga0209415_101181572	3300027905	Peatlands Soil	VNKEVSTTESLITVANRWDEFYMAPSATTINENGKRWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGR
Ga0209698_102292511	3300027911	Watersheds	RWDEFYMAPSATTIDENGKHWQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL
Ga0265353_10003601	3300028015	Soil	SDETRWDEFYMAPSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0255358_10051823	3300028069	Soil	VNRWDEFYTERSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0137415_100333012	3300028536	Vadose Zone Soil	MAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLTRDALWHNGL
Ga0302219_100423991	3300028747	Palsa	NIPNAIRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0302224_100266893	3300028759	Palsa	NAIRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0302234_100575582	3300028773	Palsa	EGLAGAIRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0302225_100338913	3300028780	Palsa	NLVFPFIVAIRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0302221_100270193	3300028806	Palsa	PNAIRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0302289_11555121	3300028857	Fen	TREILIVDVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0265760_100257862	3300031090	Soil	RWDEFYMAPRATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0170823_174837711	3300031128	Forest Soil	NRWDEFYMAPSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0302307_100561003	3300031233	Palsa	NRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0310686_1075418091	3300031708	Soil	MARSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDA
Ga0310686_1096623561	3300031708	Soil	RWDEFYMAPSATTINENGKRWRYAVARRVVQRSSALLVLESPWMSLTRDALWHNGL
Ga0307476_108920011	3300031715	Hardwood Forest Soil	MAESATTINENGVRGQYAVARRVVQRSSTLPVLESPRMSLARDALWHNG
Ga0307474_101301203	3300031718	Hardwood Forest Soil	APSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLAREALWHNGL
Ga0307474_102920922	3300031718	Hardwood Forest Soil	APSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0302315_100990963	3300031837	Palsa	GAIRWDEFYMAHGATTMNENGIGRQYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0307479_100341886	3300031962	Hardwood Forest Soil	MAESATTINENGVRWQYAVPRRVVQRPSTLLVLESPRMSLTRDELWHSGL
Ga0307479_104231083	3300031962	Hardwood Forest Soil	APPGRWDEFYMAHSATTINENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDALWHNGL
Ga0306920_1003433223	3300032261	Soil	MAPSATTIDEKGNRWQYAVPRRVVQRSSALLELESPWMSLPRDALWHNGL
Ga0306920_1006895011	3300032261	Soil	LRWDEFYMAPSATTIDENGKHRQYAVPRRVVQRSSTLLALESPRMSLTRDALWHNGL
Ga0326726_100529044	3300033433	Peat Soil	MAPSATTINENGNRWRYAVPRRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0326726_115327712	3300033433	Peat Soil	MIQQASTVETRWDEFYMAHSATTMDENGSRRQYAVARRVVQRSSALLVLESPRMSLTRDALWHNGL
Ga0334816_003421_2962_3144	3300033819	Soil	VYVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0334822_005384_3075_3284	3300034070	Soil	MDLTREILIVDVNRWDEFYTARSATTTNENGLRWQYAVTRRVVQRSSALLVLESPWMSLTRDALWYNGL
Ga0370484_0213095_1_132	3300034125	Untreated Peat Soil	MAPSATTIKENGKHWQYAVPRRVVQRSSTLLVLESPRMSLARDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068031

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences