Basic Information | |
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Family ID | F099975 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 40 residues |
Representative Sequence | LRKVKEIKGLRGDVLEYVAQGIPQIDAEIAEKGHLWMETS |
Number of Associated Samples | 85 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 36.00 % |
% of genes near scaffold ends (potentially truncated) | 68.93 % |
% of genes from short scaffolds (< 2000 bps) | 81.55 % |
Associated GOLD sequencing projects | 82 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.32 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (78.641 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands (18.447 % of family members) |
Environment Ontology (ENVO) | Unclassified (33.010 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (33.010 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 55.88% β-sheet: 0.00% Coil/Unstructured: 44.12% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.32 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF03625 | DUF302 | 3.88 |
PF00072 | Response_reg | 1.94 |
PF00756 | Esterase | 1.94 |
PF13458 | Peripla_BP_6 | 1.94 |
PF00196 | GerE | 1.94 |
PF13535 | ATP-grasp_4 | 1.94 |
PF11306 | DUF3108 | 1.94 |
PF00361 | Proton_antipo_M | 1.94 |
PF09957 | VapB_antitoxin | 0.97 |
PF01790 | LGT | 0.97 |
PF00989 | PAS | 0.97 |
PF00343 | Phosphorylase | 0.97 |
PF07729 | FCD | 0.97 |
PF00795 | CN_hydrolase | 0.97 |
PF13432 | TPR_16 | 0.97 |
PF00293 | NUDIX | 0.97 |
PF00581 | Rhodanese | 0.97 |
PF00583 | Acetyltransf_1 | 0.97 |
PF05222 | AlaDh_PNT_N | 0.97 |
PF02545 | Maf | 0.97 |
PF05598 | DUF772 | 0.97 |
PF00155 | Aminotran_1_2 | 0.97 |
PF00696 | AA_kinase | 0.97 |
PF01209 | Ubie_methyltran | 0.97 |
PF02441 | Flavoprotein | 0.97 |
PF02655 | ATP-grasp_3 | 0.97 |
PF01656 | CbiA | 0.97 |
PF07992 | Pyr_redox_2 | 0.97 |
PF13247 | Fer4_11 | 0.97 |
PF01609 | DDE_Tnp_1 | 0.97 |
PF00221 | Lyase_aromatic | 0.97 |
PF13518 | HTH_28 | 0.97 |
PF10531 | SLBB | 0.97 |
PF02954 | HTH_8 | 0.97 |
PF00872 | Transposase_mut | 0.97 |
PF03692 | CxxCxxCC | 0.97 |
PF10082 | BBP2_2 | 0.97 |
PF11075 | DUF2780 | 0.97 |
PF00528 | BPD_transp_1 | 0.97 |
PF02272 | DHHA1 | 0.97 |
PF03548 | LolA | 0.97 |
PF00664 | ABC_membrane | 0.97 |
PF01312 | Bac_export_2 | 0.97 |
PF00004 | AAA | 0.97 |
PF01808 | AICARFT_IMPCHas | 0.97 |
PF01551 | Peptidase_M23 | 0.97 |
PF13428 | TPR_14 | 0.97 |
PF14535 | AMP-binding_C_2 | 0.97 |
PF07589 | PEP-CTERM | 0.97 |
PF00406 | ADK | 0.97 |
PF01171 | ATP_bind_3 | 0.97 |
PF13899 | Thioredoxin_7 | 0.97 |
PF08402 | TOBE_2 | 0.97 |
PF13242 | Hydrolase_like | 0.97 |
PF03602 | Cons_hypoth95 | 0.97 |
PF12766 | Pyridox_oxase_2 | 0.97 |
PF02518 | HATPase_c | 0.97 |
PF13932 | GIDA_C | 0.97 |
PF01411 | tRNA-synt_2c | 0.97 |
PF13437 | HlyD_3 | 0.97 |
PF07963 | N_methyl | 0.97 |
PF00132 | Hexapep | 0.97 |
PF08149 | BING4CT | 0.97 |
PF04165 | DUF401 | 0.97 |
PF03734 | YkuD | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG3439 | Uncharacterized conserved protein, DUF302 family | Function unknown [S] | 3.88 |
COG0013 | Alanyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG0037 | tRNA(Ile)-lysidine synthase TilS/MesJ | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG0058 | Glucan phosphorylase | Carbohydrate transport and metabolism [G] | 0.97 |
COG0138 | AICAR transformylase/IMP cyclohydrolase PurH | Nucleotide transport and metabolism [F] | 0.97 |
COG0301 | Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis) | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG0424 | 7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.97 |
COG0482 | tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG0519 | GMP synthase, PP-ATPase domain/subunit | Nucleotide transport and metabolism [F] | 0.97 |
COG0563 | Adenylate kinase or related kinase | Nucleotide transport and metabolism [F] | 0.97 |
COG0603 | 7-cyano-7-deazaguanine synthase (queuosine biosynthesis) | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG0682 | Prolipoprotein diacylglyceryltransferase | Cell wall/membrane/envelope biogenesis [M] | 0.97 |
COG0742 | 16S rRNA G966 N2-methylase RsmD | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG1092 | 23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 0.97 |
COG1606 | ATP-utilizing enzyme, PP-loop superfamily | General function prediction only [R] | 0.97 |
COG1802 | DNA-binding transcriptional regulator, GntR family | Transcription [K] | 0.97 |
COG1906 | Predicted GntP-related membrane permease AF0261, DUF401 family | General function prediction only [R] | 0.97 |
COG2186 | DNA-binding transcriptional regulator, FadR family | Transcription [K] | 0.97 |
COG2226 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG | Coenzyme transport and metabolism [H] | 0.97 |
COG2227 | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase | Coenzyme transport and metabolism [H] | 0.97 |
COG2242 | Precorrin-6B methylase 2 | Coenzyme transport and metabolism [H] | 0.97 |
COG2265 | tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG2834 | Outer membrane lipoprotein-sorting protein | Cell wall/membrane/envelope biogenesis [M] | 0.97 |
COG2890 | Methylase of polypeptide chain release factors | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG2986 | Histidine ammonia-lyase | Amino acid transport and metabolism [E] | 0.97 |
COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 0.97 |
COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 0.97 |
COG3293 | Transposase | Mobilome: prophages, transposons [X] | 0.97 |
COG3328 | Transposase (or an inactivated derivative) | Mobilome: prophages, transposons [X] | 0.97 |
COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 0.97 |
COG5421 | Transposase | Mobilome: prophages, transposons [X] | 0.97 |
COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 0.97 |
COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 80.58 % |
Unclassified | root | N/A | 19.42 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001533|MLSed_10007624 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 8786 | Open in IMG/M |
3300001533|MLSed_10169654 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales | 897 | Open in IMG/M |
3300001533|MLSed_10324759 | Not Available | 539 | Open in IMG/M |
3300001854|JGI24422J19971_10164808 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1014 | Open in IMG/M |
3300001855|JGI2160J19893_10105656 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 546 | Open in IMG/M |
3300002231|KVRMV2_101553678 | All Organisms → cellular organisms → Archaea | 712 | Open in IMG/M |
3300003541|JGI20214J51650_10115023 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 1839 | Open in IMG/M |
3300003991|Ga0055461_10141226 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 629 | Open in IMG/M |
3300004004|Ga0055451_10107934 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 1109 | Open in IMG/M |
3300004008|Ga0055446_10238621 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 551 | Open in IMG/M |
3300004014|Ga0055456_10282898 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 586 | Open in IMG/M |
3300004024|Ga0055436_10170067 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 672 | Open in IMG/M |
3300004028|Ga0055447_10081780 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 900 | Open in IMG/M |
3300004029|Ga0055442_10142962 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 753 | Open in IMG/M |
3300004063|Ga0055483_10100571 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 896 | Open in IMG/M |
3300004071|Ga0055486_10103040 | Not Available | 650 | Open in IMG/M |
3300004146|Ga0055495_10067828 | Not Available | 784 | Open in IMG/M |
3300004459|Ga0065201_1611709 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 648 | Open in IMG/M |
3300005182|Ga0069000_10066642 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 843 | Open in IMG/M |
3300005215|Ga0069001_10004834 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp. | 2165 | Open in IMG/M |
3300005216|Ga0068994_10020144 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 1347 | Open in IMG/M |
3300005252|Ga0068712_1020629 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfosudaceae → Desulfosudis → Desulfosudis oleivorans | 3505 | Open in IMG/M |
3300005254|Ga0068714_10329815 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 588 | Open in IMG/M |
3300005264|Ga0073581_101831 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina | 14029 | Open in IMG/M |
3300005820|Ga0078747_135051 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia farcinica | 1128 | Open in IMG/M |
3300005822|Ga0078744_1090173 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 712 | Open in IMG/M |
3300005832|Ga0074469_10333859 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 11745 | Open in IMG/M |
3300006930|Ga0079303_10231883 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 747 | Open in IMG/M |
3300007764|Ga0102950_1294437 | All Organisms → cellular organisms → Bacteria | 508 | Open in IMG/M |
3300007764|Ga0102950_1298766 | Not Available | 505 | Open in IMG/M |
3300007784|Ga0102955_1001533 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 4829 | Open in IMG/M |
3300008627|Ga0115656_1195948 | Not Available | 763 | Open in IMG/M |
3300009008|Ga0115649_1212771 | All Organisms → cellular organisms → Bacteria | 1410 | Open in IMG/M |
3300009009|Ga0105105_10521469 | Not Available | 682 | Open in IMG/M |
3300009078|Ga0105106_10139854 | Not Available | 1779 | Open in IMG/M |
3300009127|Ga0118724_1015625 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2 | 7854 | Open in IMG/M |
3300009129|Ga0118728_1173850 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium | 920 | Open in IMG/M |
3300009145|Ga0102961_1016618 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium | 1554 | Open in IMG/M |
3300009153|Ga0105094_10670622 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 606 | Open in IMG/M |
3300009431|Ga0120401_1010513 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 17753 | Open in IMG/M |
3300009431|Ga0120401_1023989 | All Organisms → cellular organisms → Bacteria | 9233 | Open in IMG/M |
3300009506|Ga0118657_10612571 | All Organisms → cellular organisms → Bacteria | 1388 | Open in IMG/M |
3300009506|Ga0118657_10669244 | All Organisms → cellular organisms → Bacteria | 1314 | Open in IMG/M |
3300009506|Ga0118657_11572484 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH16 | 774 | Open in IMG/M |
3300009506|Ga0118657_11584345 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 770 | Open in IMG/M |
3300009509|Ga0123573_10395393 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia farcinica | 1326 | Open in IMG/M |
3300009509|Ga0123573_10398376 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1320 | Open in IMG/M |
3300009509|Ga0123573_10635684 | All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Sediminispirochaeta | 1007 | Open in IMG/M |
3300009509|Ga0123573_11373917 | All Organisms → cellular organisms → Bacteria | 658 | Open in IMG/M |
3300009513|Ga0129285_10612943 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium SEEP-SAG10 | 509 | Open in IMG/M |
3300009528|Ga0114920_10212264 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1289 | Open in IMG/M |
3300009529|Ga0114919_10131912 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 1804 | Open in IMG/M |
3300009529|Ga0114919_10855288 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → unclassified Desulfuromonadales → Desulfuromonadales bacterium C00003093 | 615 | Open in IMG/M |
3300009874|Ga0131789_10186489 | All Organisms → cellular organisms → Bacteria | 559 | Open in IMG/M |
3300010413|Ga0136851_10303775 | All Organisms → cellular organisms → Bacteria | 1619 | Open in IMG/M |
3300010430|Ga0118733_102638126 | All Organisms → cellular organisms → Bacteria | 992 | Open in IMG/M |
3300011118|Ga0114922_11659708 | All Organisms → cellular organisms → Bacteria | 513 | Open in IMG/M |
3300011262|Ga0151668_1324373 | Not Available | 762 | Open in IMG/M |
3300014295|Ga0075305_1030222 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 944 | Open in IMG/M |
3300014307|Ga0075304_1064882 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 794 | Open in IMG/M |
3300017991|Ga0180434_10618765 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium | 825 | Open in IMG/M |
3300019733|Ga0194013_1008840 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 957 | Open in IMG/M |
3300022218|Ga0224502_10369567 | Not Available | 555 | Open in IMG/M |
(restricted) 3300022938|Ga0233409_10033469 | Not Available | 1431 | Open in IMG/M |
(restricted) 3300022938|Ga0233409_10085977 | Not Available | 976 | Open in IMG/M |
(restricted) 3300022938|Ga0233409_10103774 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 901 | Open in IMG/M |
(restricted) 3300022938|Ga0233409_10165051 | Not Available | 735 | Open in IMG/M |
(restricted) 3300023089|Ga0233408_10129469 | Not Available | 560 | Open in IMG/M |
3300025554|Ga0210060_1042543 | Not Available | 758 | Open in IMG/M |
3300025557|Ga0210141_1032591 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 998 | Open in IMG/M |
3300025565|Ga0210110_1030747 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1354 | Open in IMG/M |
3300025568|Ga0210095_1004878 | All Organisms → cellular organisms → Bacteria | 2858 | Open in IMG/M |
3300025573|Ga0210133_1024985 | Not Available | 1275 | Open in IMG/M |
3300025969|Ga0210080_1002576 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 2196 | Open in IMG/M |
3300026099|Ga0209920_1004101 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila | 1862 | Open in IMG/M |
3300026138|Ga0209951_1067000 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 756 | Open in IMG/M |
3300026534|Ga0256841_1007272 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 7304 | Open in IMG/M |
3300027790|Ga0209273_10416076 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 532 | Open in IMG/M |
3300027792|Ga0209287_10116208 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → environmental samples → uncultured Desulfobacterium sp. | 1006 | Open in IMG/M |
3300027888|Ga0209635_10846270 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 650 | Open in IMG/M |
3300027917|Ga0209536_102151892 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp. SDB | 666 | Open in IMG/M |
3300031276|Ga0307441_1124647 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada | 756 | Open in IMG/M |
3300031277|Ga0307425_1207245 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SG8_3 | 593 | Open in IMG/M |
3300031341|Ga0307418_1087841 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 814 | Open in IMG/M |
3300031341|Ga0307418_1097867 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 763 | Open in IMG/M |
3300031354|Ga0307446_1039564 | All Organisms → cellular organisms → Bacteria | 1388 | Open in IMG/M |
3300031367|Ga0307440_1059602 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1137 | Open in IMG/M |
3300031371|Ga0307423_1065028 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | 1162 | Open in IMG/M |
3300031691|Ga0316579_10258072 | Not Available | 843 | Open in IMG/M |
3300031727|Ga0316576_10013950 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatiglans → Desulfatiglans anilini | 5357 | Open in IMG/M |
3300031727|Ga0316576_10982321 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 602 | Open in IMG/M |
3300031733|Ga0316577_10237839 | All Organisms → cellular organisms → Bacteria | 1030 | Open in IMG/M |
3300032061|Ga0315540_10053712 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria | 1921 | Open in IMG/M |
3300032133|Ga0316583_10001960 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatiglans → Desulfatiglans anilini | 7029 | Open in IMG/M |
3300032163|Ga0315281_12280922 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 511 | Open in IMG/M |
3300032251|Ga0316198_10001524 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 13653 | Open in IMG/M |
3300032252|Ga0316196_10232289 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 814 | Open in IMG/M |
3300032258|Ga0316191_10524618 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium | 862 | Open in IMG/M |
3300032276|Ga0316188_10025248 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 2801 | Open in IMG/M |
3300033541|Ga0316596_1190923 | Not Available | 568 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 18.45% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 7.77% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 6.80% |
Marine Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment | 5.83% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 5.83% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 4.85% |
Mangrove Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment | 4.85% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 4.85% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 3.88% |
Marine Sediment | Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment | 3.88% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 3.88% |
Mangrove Sediment | Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment | 3.88% |
Benthic | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic | 2.91% |
Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Sediment | 1.94% |
Worm Burrow | Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow | 1.94% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.94% |
Enrichment Culture | Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture | 1.94% |
Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment | 0.97% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.97% |
Salt Marsh Sediment | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment | 0.97% |
Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 0.97% |
Sediment | Environmental → Aquatic → Marine → Unclassified → Unclassified → Sediment | 0.97% |
Hydrothermal Vents | Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vents | 0.97% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 0.97% |
Sediment | Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment | 0.97% |
Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 0.97% |
Hypersaline Lake Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment | 0.97% |
Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.97% |
Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment | 0.97% |
Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment | 0.97% |
Beach Aquifer Porewater | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater | 0.97% |
Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 0.97% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300001533 | Benthic freshwater microbial communities from British Columbia, Canada | Environmental | Open in IMG/M |
3300001854 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 | Environmental | Open in IMG/M |
3300001855 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 | Environmental | Open in IMG/M |
3300002231 | Marine sediment microbial communities from Santorini caldera mats, Greece - red mat | Environmental | Open in IMG/M |
3300003541 | Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk | Environmental | Open in IMG/M |
3300003991 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300004004 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D2 | Environmental | Open in IMG/M |
3300004008 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2 | Environmental | Open in IMG/M |
3300004014 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2 | Environmental | Open in IMG/M |
3300004024 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 | Environmental | Open in IMG/M |
3300004028 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2 | Environmental | Open in IMG/M |
3300004029 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2 | Environmental | Open in IMG/M |
3300004063 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2 | Environmental | Open in IMG/M |
3300004071 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 | Environmental | Open in IMG/M |
3300004146 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2 | Environmental | Open in IMG/M |
3300004459 | Marine microbial communities from Galveston Bay (MSEDA12C- fraction 11) | Environmental | Open in IMG/M |
3300005182 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordA_D2 | Environmental | Open in IMG/M |
3300005215 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2 | Environmental | Open in IMG/M |
3300005216 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2 | Environmental | Open in IMG/M |
3300005252 | Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS1 (Arthur Kill Sulfidogenic replicate 1) MetaG | Engineered | Open in IMG/M |
3300005254 | Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG | Engineered | Open in IMG/M |
3300005264 | Hydrothermal sediment microbial communities from Guaymas Basin, California, USA 4572. Combined assembly of Gp0115316 and Gp0146562 | Environmental | Open in IMG/M |
3300005820 | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, PM2 | Environmental | Open in IMG/M |
3300005822 | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, MM1 | Environmental | Open in IMG/M |
3300005832 | Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB | Environmental | Open in IMG/M |
3300006930 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC | Environmental | Open in IMG/M |
3300007764 | Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG | Environmental | Open in IMG/M |
3300007784 | Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MG | Environmental | Open in IMG/M |
3300008627 | Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2um | Environmental | Open in IMG/M |
3300009008 | Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um | Environmental | Open in IMG/M |
3300009009 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 | Environmental | Open in IMG/M |
3300009078 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
3300009107 | Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 295m, 2.7-0.2um, replicate b | Environmental | Open in IMG/M |
3300009127 | Combined Assembly of Gp0137036, Gp0137038 | Environmental | Open in IMG/M |
3300009129 | Combined Assembly of Gp0139513, Gp0139514 | Environmental | Open in IMG/M |
3300009145 | Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_D1_MG | Environmental | Open in IMG/M |
3300009153 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 | Environmental | Open in IMG/M |
3300009431 | Combined Assembly of Gp0137033, Gp0137034 | Environmental | Open in IMG/M |
3300009506 | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8 | Environmental | Open in IMG/M |
3300009509 | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11 | Environmental | Open in IMG/M |
3300009513 | Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - F-1Y | Environmental | Open in IMG/M |
3300009528 | Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG | Environmental | Open in IMG/M |
3300009529 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG | Environmental | Open in IMG/M |
3300009874 | Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC1T | Environmental | Open in IMG/M |
3300010413 | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9 | Environmental | Open in IMG/M |
3300010430 | Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples | Environmental | Open in IMG/M |
3300011118 | Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG | Environmental | Open in IMG/M |
3300011262 | Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_5, total | Environmental | Open in IMG/M |
3300014295 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1 | Environmental | Open in IMG/M |
3300014307 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1 | Environmental | Open in IMG/M |
3300017991 | Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG | Environmental | Open in IMG/M |
3300019733 | Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_9-10_MG | Environmental | Open in IMG/M |
3300022218 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13 | Environmental | Open in IMG/M |
3300022938 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MG | Environmental | Open in IMG/M |
3300023089 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_11_MG | Environmental | Open in IMG/M |
3300025554 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025557 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025565 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025568 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025573 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025969 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2 (SPAdes) | Environmental | Open in IMG/M |
3300026099 | Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_D1_MG (SPAdes) | Environmental | Open in IMG/M |
3300026138 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300026534 | Hydrothermal vent microbial communities from Mid Atlantic Ridge, Atlantic Ocean - 356-308 | Environmental | Open in IMG/M |
3300027790 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes) | Environmental | Open in IMG/M |
3300027792 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes) | Environmental | Open in IMG/M |
3300027888 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes) | Environmental | Open in IMG/M |
3300027917 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes) | Environmental | Open in IMG/M |
3300031276 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-20 | Environmental | Open in IMG/M |
3300031277 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-30 | Environmental | Open in IMG/M |
3300031341 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-20 | Environmental | Open in IMG/M |
3300031354 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-20 | Environmental | Open in IMG/M |
3300031367 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-10 | Environmental | Open in IMG/M |
3300031371 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-10 | Environmental | Open in IMG/M |
3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Host-Associated | Open in IMG/M |
3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Host-Associated | Open in IMG/M |
3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Host-Associated | Open in IMG/M |
3300032061 | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10 | Environmental | Open in IMG/M |
3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Host-Associated | Open in IMG/M |
3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
3300032251 | Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic | Environmental | Open in IMG/M |
3300032252 | Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cm | Environmental | Open in IMG/M |
3300032258 | Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm | Environmental | Open in IMG/M |
3300032276 | Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1 | Environmental | Open in IMG/M |
3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
MLSed_1000762415 | 3300001533 | Benthic | MDGPSQIKGLRGGVLEYAAQGIPQIDEEIAENGHFWMETS* |
MLSed_101696541 | 3300001533 | Benthic | QIKGLRGGVLEYAAQGIPQIDAEIAENSHFRIETS* |
MLSed_103247591 | 3300001533 | Benthic | RARAMDGPSQIKGLRGGVLEYAAQGIPQIDAELAENSHFWMETS* |
JGI24422J19971_101648082 | 3300001854 | Marine Sediment | MHAPSQFKGLRGGVHRYVAQAIPQIDAEIAEKGHFWMETS* |
JGI2160J19893_101056562 | 3300001855 | Marine Sediment | LRKVKEFKGLRGDVLKYVAQEIPQIDAEIPQNGHLWMEAS* |
KVRMV2_1015536781 | 3300002231 | Marine Sediment | IKGLRGGVACYAAQAIPQIDAEIGEIDHLWMETS* |
JGI20214J51650_101150231 | 3300003541 | Wetland | LPKVKETKLLRGGILGYAAQAIAQVDAEIGQKGHLWMETN* |
Ga0055461_101412261 | 3300003991 | Natural And Restored Wetlands | LRKIKEIKGLRGDVLQYVAQGIPLIDAEMAGKSHLWMKTN* |
Ga0055451_101079342 | 3300004004 | Natural And Restored Wetlands | MQKLAIFRKVKKIKKLRGGVQMVHAQVIPQIDEEIAEKGPFWMETNSG* |
Ga0055446_102386211 | 3300004008 | Natural And Restored Wetlands | LRKVKESKEWRGGILPYAAQAIPLLDAEIAQKGHFWMETSV* |
Ga0055456_102828982 | 3300004014 | Natural And Restored Wetlands | LKVKEIKELRGGVLLYAAQAIPQIDAEIEQKGHLWMETI* |
Ga0055436_101700672 | 3300004024 | Natural And Restored Wetlands | MSNFRKIKEIKELCGGVQIDAAQVIPQIDAEIAKKGYFWMETSWPLGLW |
Ga0055447_100817801 | 3300004028 | Natural And Restored Wetlands | LLTAKAIKELRGGLLLYAAQAIPQIDAEIGQKGHLWIDHS* |
Ga0055442_101429622 | 3300004029 | Natural And Restored Wetlands | CKVKENKGLCGGVPRYVAQVTPQFDAEIAEKGHLWMETS* |
Ga0055483_101005712 | 3300004063 | Natural And Restored Wetlands | RKIKEVKGLRGDVLWYVAQASTQIDAEIGEKGRLWMETS* |
Ga0055486_101030401 | 3300004071 | Natural And Restored Wetlands | MSSFLQFKEIKEWRGGVLVYVAQAIPPIDAEIAEKGHLWT |
Ga0055495_100678282 | 3300004146 | Natural And Restored Wetlands | MSSFLQVKEIKEWRGGVLVYVAQAIPPIDAEIAEKGHLWT |
Ga0065201_16117091 | 3300004459 | Sediment | FFCKIKKSKGLRGDVREYLAQMIPQADVEMVKKSHLWMETR* |
Ga0069000_100666421 | 3300005182 | Natural And Restored Wetlands | VPGFRKVKKIKGLRGGVLMYAAQEIPLIDAEIPEKGHLWMETN* |
Ga0069001_100048343 | 3300005215 | Natural And Restored Wetlands | MQKLAIFRNVKAIKELRVPPSGEQVISQINAEIAEKGNFWMETN |
Ga0068994_100201442 | 3300005216 | Natural And Restored Wetlands | LLKVKEIKELRGRTQLYAAQPILKIDTEIGQKVAFFKGI* |
Ga0068712_10206295 | 3300005252 | Enrichment Culture | FRKVKENKGMCGDVLDVVAQAAPQFDTEIAGKGHLRMETV* |
Ga0068714_103298152 | 3300005254 | Enrichment Culture | VKEIKGLRGAYNRYAAQGIPQIDAEIAEKGHFWMETRQAL* |
Ga0073581_10183118 | 3300005264 | Sediment | MSNFSQGKEIKELRGGVQVDAAQVIPQIDAEIAEKGHFWMHTN* |
Ga0078747_1350512 | 3300005820 | Marine Sediment | METPSQIKGLRGGVHAYAAQAIPKIDAEIAEKGHFWMETI* |
Ga0078744_10246992 | 3300005822 | Marine Sediment | SVSFQFRNEQFCKVKENKGLRGGVPGYVAQATPHFDAEIAEKGHLWMETS* |
Ga0078744_10901731 | 3300005822 | Marine Sediment | VKENKGLRGGVPRYVAQATPQFDAEIAKKGHLWMETV* |
Ga0074469_103338595 | 3300005832 | Sediment (Intertidal) | LFKVKEIKELRGGVLLYAAQAIPQIDAEIGEKGHLWMETNYAY* |
Ga0079303_102318832 | 3300006930 | Deep Subsurface | MSNFCKIKEIKELRGGVQIDAAQVIPQINAEIAEKGHFWMETS* |
Ga0102950_12944371 | 3300007764 | Soil | KKNKGLRGGVRKYVAQGTPQFDAEIAEKGHLWMETSIKFH* |
Ga0102950_12987662 | 3300007764 | Soil | MIFSKFKEIKGLRGDVLKYIAQVILQIDAEIVKKGRLWMET |
Ga0102955_10015336 | 3300007784 | Soil | LFKIKEIKELRGGLLFYAAQAIPQIDAEIGQKGHLWMETNYAY* |
Ga0115656_11959481 | 3300008627 | Marine | IKLLRGDVACYVAQARAPIDAELGQKDHSWMEPN* |
Ga0115649_12127713 | 3300009008 | Marine | YKFKEIKELRGGVLKYAAQAIPRIDAEIVKKGHFWMETN* |
Ga0105105_105214691 | 3300009009 | Freshwater Sediment | NEELRGDVPRYVAQATPQFDADIAEKSHLWMETK* |
Ga0105106_101398542 | 3300009078 | Freshwater Sediment | PSQNEGLRGDVPRYVAQATPQFDAKIAEKGHLWM* |
Ga0117918_1358972 | 3300009107 | Marine | EIKLLRGDVACYVAQARAPIDAEIGQKDHSWMETI* |
Ga0118724_10156258 | 3300009127 | Marine | FRKVKKIKELRGGVHIVRRQVIPQIPAEIAEKGHFWMETN* |
Ga0118728_11738501 | 3300009129 | Marine | LRKTKEIKGLRGDALMCVAQAIPQIDAEFAKKDHFGME |
Ga0102961_10166183 | 3300009145 | Soil | LFKVKEIKELRVPSFGREQAIPQIDAEIGEKGHLWMETNYAY* |
Ga0105094_106706222 | 3300009153 | Freshwater Sediment | MDAPSQNEELRGGVPRYAAQATPEFDAEIAEKGHLWME |
Ga0120401_10105131 | 3300009431 | Marine | FVKIKEIKGLRGDVACHVAQAIPKIDAEIGEIDHLWMETD* |
Ga0120401_10239891 | 3300009431 | Marine | YKFKEIKELRGGVLKYAAQAIPRIDAEIVKKGRLWMETS* |
Ga0118657_106125712 | 3300009506 | Mangrove Sediment | LRKIKEIKGLRGDVLQYVAQGILMIDAEIAGKSHLWIKIN* |
Ga0118657_106692441 | 3300009506 | Mangrove Sediment | MDAPSQIKGLRGGVLNYAAREILQIDTEIAEKGHLWMETNWGI |
Ga0118657_115724842 | 3300009506 | Mangrove Sediment | LQKLAIIRKIKEIKELRGGVPNGTPAQGIPQIDAEIAQKDHLWIDTN* |
Ga0118657_115843452 | 3300009506 | Mangrove Sediment | LRGTVLKYAAQKIPQIDAEIAQKGYLWMETGQLGQT |
Ga0123573_103953932 | 3300009509 | Mangrove Sediment | EIKGLRGGVLKYAAQEIPQIDTEIAEKGHLWMETSEMAHYWK* |
Ga0123573_103983762 | 3300009509 | Mangrove Sediment | VKENKGLRGDVRSHVAQGTPQFDTEIAEKGHLWMETR* |
Ga0123573_106356841 | 3300009509 | Mangrove Sediment | MDGPSQIKGLRGGVLNYATQEIPQIDTEIAEKGHFRMKTNQLCPIP |
Ga0123573_113739172 | 3300009509 | Mangrove Sediment | MDAPCQIKWLRGGALEYAAQEIPQIDTEIAEKGHLWMETN* |
Ga0129285_106129432 | 3300009513 | Beach Aquifer Porewater | EIKGLRGGTHWYVAQTIPQSDAEIAEKGHFWMETS* |
Ga0114920_102122642 | 3300009528 | Deep Subsurface | ARARGMDAPSQIKGLRGGVHWYAAQAITQIDAEIAKKGHFWMETD* |
Ga0114919_101319121 | 3300009529 | Deep Subsurface | LKGLRGDVRRYVAQAIQQIDAEIAKKGHFWMETSYNPYD* |
Ga0114919_108552882 | 3300009529 | Deep Subsurface | FRKVKEIKGLRGDVRRYVAQAIPQIDAEIAKNGHFWMETN* |
Ga0131789_101864891 | 3300009874 | Sediment | VIFREVKEIRGLRGDVLMYAIQTILQIDAEIAEKGHFW |
Ga0136851_103037751 | 3300010413 | Mangrove Sediment | SFRKVKQIQGLRGGVLPYAAQEIPQIDTEITEKGHLWMQTSAQ* |
Ga0118733_1024591581 | 3300010430 | Marine Sediment | VKEIKLLRGDVACYVAQARAPIDAEIGQKDHSWMENR* |
Ga0118733_1026381263 | 3300010430 | Marine Sediment | RKLQEIKGLRGDVLGYVAQGNPKIDTKIAEKRHFRTETI* |
Ga0114922_116597081 | 3300011118 | Deep Subsurface | MIFYKFKEIKELRGGLQLYAAQTISKIDAEIVKKGHFWMETN* |
Ga0151668_13243732 | 3300011262 | Marine | IKEIKGLRGDVACYVAQANPQIDAEIAEKGHLWMETR* |
Ga0075305_10302221 | 3300014295 | Natural And Restored Wetlands | GGILLYAAQAIPPIDAEIAEKGRLWLETNLFYREP* |
Ga0075304_10648822 | 3300014307 | Natural And Restored Wetlands | AALRGGILLYAAQAIPPIDAEIAEKGNLWTETSLVS* |
Ga0180434_106187651 | 3300017991 | Hypersaline Lake Sediment | KIKGLRGGVPRYVAQAIPQIDAEIAEKGHLWMETS |
Ga0194013_10088402 | 3300019733 | Sediment | LFKVKEIKELPGGLLFYAAQAIPQIDAEIGQKGHLWMETNYAY |
Ga0224502_103695671 | 3300022218 | Sediment | KVKEIKGLRGGVLLRYVAQEIPLIDTEIVARAHLWTETSEW |
(restricted) Ga0233409_100334692 | 3300022938 | Seawater | KENKGMRGGVPRYVAQAIPQFDAEIAEKGHLWMETIYFSP |
(restricted) Ga0233409_100859772 | 3300022938 | Seawater | VKGNKGLRGGVPRYVAQATPQFDAEIAEKGHLWMETNWEQLIWTISA |
(restricted) Ga0233409_101037742 | 3300022938 | Seawater | KENKGMRGGVPRYVAQATPQFDAKIAEKGHLWMETS |
(restricted) Ga0233409_101650511 | 3300022938 | Seawater | NKELRGGVPRYVAQTTPQFDAEIAEKGHLWMETISC |
(restricted) Ga0233408_101294692 | 3300023089 | Seawater | VRGGVPRYVAQAKPQFDAEIAEKGHLWMETNLHFAKILCTP |
Ga0210060_10425432 | 3300025554 | Natural And Restored Wetlands | LRKIKEIKGLRGDVLQYVAQGIPLIDAEMAGKSHLWMKTN |
Ga0210141_10325911 | 3300025557 | Natural And Restored Wetlands | LLKVKEIKELRGGVLLYAAQAIPQIDAEIGQKGHLWMETS |
Ga0210110_10307471 | 3300025565 | Natural And Restored Wetlands | LRGGVLLYVAQAIPPIDAEIAEKGHLWTETNLNPPCL |
Ga0210095_10048782 | 3300025568 | Natural And Restored Wetlands | VALRGGVLLYAAQAIPPIDAEIAGKGHFWTETNSD |
Ga0210133_10249853 | 3300025573 | Natural And Restored Wetlands | LRKIKEIKGLRGDVLQYVAQGIPLIDAEMAGKSHLWMKT |
Ga0210080_10025761 | 3300025969 | Natural And Restored Wetlands | KFKEINKLRGGVLVYAAQAIPPIDAEIAEKGHLWTETT |
Ga0209920_10041012 | 3300026099 | Soil | LFKVKEIKELRVPSFGREQAIPQIDAEIGEKGHLWMETNYAY |
Ga0209951_10670002 | 3300026138 | Pond Water | KEIKGLRGGVLLRYVAQEIPLIDAEIPEKGHLWMETN |
Ga0256841_10072722 | 3300026534 | Hydrothermal Vents | LRKVKEIKGLRGDVLEYVAQGIPQIDAEIAEKGHLWMETS |
Ga0209273_104160761 | 3300027790 | Marine Sediment | RKVKETKGLRGGVLMYAAQEIPLIDAEIPEKGHLWMETK |
Ga0209287_101162082 | 3300027792 | Freshwater Sediment | VRSMDAPSQNKELRGDVPRYVAQATPQFDAEIAEKGHLWMETNDE |
Ga0209635_108462702 | 3300027888 | Marine Sediment | IFSKIKEIKGLRVPPGGREQGIPQIDAEIAEKGHFWMETR |
Ga0209536_1021518921 | 3300027917 | Marine Sediment | KVKEIKGLRGGVLKYAAQEILKIDTEIAQKGHLWMETS |
Ga0307441_11246471 | 3300031276 | Salt Marsh | LLKVKEIKELHGGVLLYAAQAIPQIDAEIGQKGHLWM |
Ga0307425_12072452 | 3300031277 | Salt Marsh | IFRKVKKIKGLRGGVPGYLAQAIPQIDAEIAEKGHLWMETSWLS |
Ga0307418_10878412 | 3300031341 | Salt Marsh | KGLRGAVRQYVAQVIPQIDDEIVKNGHLWMETRMKSL |
Ga0307418_10978671 | 3300031341 | Salt Marsh | PARARGTEAPSQIKGLRGGVPGYVAQAIPLIDAEIAEKGHL |
Ga0307446_10395641 | 3300031354 | Salt Marsh | EMRYFFCKIKEIKGLRGDVLWYVAQVIPQIDAETVKNSHLWMETS |
Ga0307440_10596021 | 3300031367 | Salt Marsh | KIKKTKGLRGAVRQYVAQVIPQIDDEIVKNGHLWRETRMKSL |
Ga0307423_10650281 | 3300031371 | Salt Marsh | KEIKELRGGILLYAAQAVPPIDAEIVEKGHLWTETGEDS |
Ga0316579_102580721 | 3300031691 | Rhizosphere | KEINELRGGILLYTAQAIPPIDTEIAVKGHLWTETS |
Ga0316576_100139502 | 3300031727 | Rhizosphere | MRCFFKTKKIKGLRGDVREYVAQVIPQGDAEMVKKSRLWMETR |
Ga0316576_109823212 | 3300031727 | Rhizosphere | MRYFYKIKKIKGFRGDVREYVAQGIPQVDAEIVKKSHLWMETI |
Ga0316577_102378391 | 3300031733 | Rhizosphere | EIKGLRGGILLYAAQAIPSIDAEIAEKGHLWTETS |
Ga0315540_100537123 | 3300032061 | Salt Marsh Sediment | YFFCKIKEIKGLRGDVLWYVAQVIPQIDAETVKNSHLWMETS |
Ga0316583_100019609 | 3300032133 | Rhizosphere | MRYFYKIKEIKGLRGDVRQYAAQVIPQIDDEMVKNSHLWMETI |
Ga0315281_122809221 | 3300032163 | Sediment | LLKVKEIKELRGGVLLYATQAIPQIDAEIGQKGHLWMETI |
Ga0316198_1000152411 | 3300032251 | Sediment | LFKVKEIKGLRGSDPLYKAQAIPPIDAKIWQKDHLWMETNYNQQVLSIGR |
Ga0316196_102322891 | 3300032252 | Sediment | VPGFRKVKKIKGLRGGVLMYAAQEIPLIDAEIPEKGHLWMETN |
Ga0316191_105246181 | 3300032258 | Worm Burrow | LFKVKEIKKLRGGVLLYTAQAIPQIDAEIGQKGHL |
Ga0316188_100252483 | 3300032276 | Worm Burrow | CKFKEIKELRGGVLLYAAQAIPPIDGEIAEKGHLWMETS |
Ga0316596_11909231 | 3300033541 | Rhizosphere | EIKELRGGILLYAAQAIPPIDAEIAEKGHLWTETS |
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