Metagenome / Metatranscriptome Family F092695

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092695
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	59 residues
Representative Sequence	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Number of Associated Samples	82
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	57.94 %
% of genes from short scaffolds (< 2000 bps)	77.57 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.682 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (40.187 % of family members)
Environment Ontology (ENVO)	Unclassified (90.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.785 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.59% β-sheet: 38.10% Coil/Unstructured: 60.32%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13402	Peptidase_M60	2.80
PF13460	NAD_binding_10	2.80
PF13531	SBP_bac_11	2.80
PF13205	Big_5	2.80
PF00107	ADH_zinc_N	1.87
PF13602	ADH_zinc_N_2	1.87
PF02230	Abhydrolase_2	1.87
PF01925	TauE	0.93
PF01124	MAPEG	0.93
PF00106	adh_short	0.93
PF01063	Aminotran_4	0.93
PF09423	PhoD	0.93
PF03480	DctP	0.93
PF03992	ABM	0.93
PF01957	NfeD	0.93
PF13416	SBP_bac_8	0.93
PF14535	AMP-binding_C_2	0.93
PF04952	AstE_AspA	0.93
PF02645	DegV	0.93
PF13508	Acetyltransf_7	0.93
PF12838	Fer4_7	0.93
PF02574	S-methyl_trans	0.93
PF02353	CMAS	0.93
PF13442	Cytochrome_CBB3	0.93
PF09948	DUF2182	0.93
PF07040	DUF1326	0.93
PF01396	zf-C4_Topoisom	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.87
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.93
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.93
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.93
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.93
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.93
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.93
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
All Organisms	root	All Organisms	38.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
cellular organisms	root	All Organisms → cellular organisms	38.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.38 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.36 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.67 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	4.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.93 %
Candidatus Lambdaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.87 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	1.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	0.93 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.93 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.93 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4.67 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	1.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.87 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.93 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.93 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.93 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4.67 %
unclassified Acidiferrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae	1.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.87 %
Paraglaciecola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Paraglaciecola	0.93 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.93 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	0.93 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4.67 %
Acidiferrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium	1.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.87 %
Candidatus Nitrosopumilus sediminis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	0.93 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.93 %
Paraglaciecola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Paraglaciecola	0.93 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000163\|LPjun09P162000mDRAFT_c1004764	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300000260\|LP_A_09_P20_500DRAFT_1022837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium	884	Open in IMG/M
3300001570\|JGI12211J15759_106062	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300001780\|supr46_1004315	All Organisms → cellular organisms → Bacteria → Proteobacteria	7988	Open in IMG/M
3300001783\|Vondamm_10110276	Not Available	703	Open in IMG/M
3300002913\|JGI26060J43896_10021259	All Organisms → cellular organisms → Bacteria → Proteobacteria	2062	Open in IMG/M
3300003478\|JGI26238J51125_1100186	Not Available	547	Open in IMG/M
3300004110\|Ga0008648_10038305	Not Available	1400	Open in IMG/M
3300004279\|Ga0066605_10006876	All Organisms → cellular organisms → Bacteria → Proteobacteria	6392	Open in IMG/M
3300005239\|Ga0073579_1104404	Not Available	814	Open in IMG/M
3300005399\|Ga0066860_10038080	Not Available	1819	Open in IMG/M
3300005399\|Ga0066860_10038145	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300005399\|Ga0066860_10331055	Not Available	500	Open in IMG/M
3300005402\|Ga0066855_10267980	Not Available	560	Open in IMG/M
3300005422\|Ga0066829_10082948	Not Available	971	Open in IMG/M
3300005427\|Ga0066851_10051995	All Organisms → cellular organisms → Bacteria → Proteobacteria	1391	Open in IMG/M
3300005427\|Ga0066851_10233158	Not Available	574	Open in IMG/M
3300005594\|Ga0066839_10234456	Not Available	635	Open in IMG/M
3300005605\|Ga0066850_10009145	All Organisms → cellular organisms → Bacteria	4481	Open in IMG/M
3300005948\|Ga0066380_10149496	Not Available	701	Open in IMG/M
3300005951\|Ga0066379_10268809	Not Available	555	Open in IMG/M
3300005953\|Ga0066383_10098538	Not Available	882	Open in IMG/M
3300005953\|Ga0066383_10253025	Not Available	518	Open in IMG/M
3300005969\|Ga0066369_10113639	Not Available	914	Open in IMG/M
3300006002\|Ga0066368_10029623	Not Available	1921	Open in IMG/M
3300006019\|Ga0066375_10028417	Not Available	1979	Open in IMG/M
3300006019\|Ga0066375_10213772	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	599	Open in IMG/M
3300006076\|Ga0081592_1244789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	525	Open in IMG/M
3300006080\|Ga0081602_1321101	Not Available	591	Open in IMG/M
3300006166\|Ga0066836_10653207	Not Available	637	Open in IMG/M
3300006304\|Ga0068504_1184531	Not Available	539	Open in IMG/M
3300006308\|Ga0068470_1093732	Not Available	1425	Open in IMG/M
3300006308\|Ga0068470_1232759	Not Available	660	Open in IMG/M
3300006310\|Ga0068471_1131322	All Organisms → cellular organisms → Bacteria	5565	Open in IMG/M
3300006310\|Ga0068471_1138595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4533	Open in IMG/M
3300006313\|Ga0068472_10644395	Not Available	1031	Open in IMG/M
3300006316\|Ga0068473_1630135	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1007	Open in IMG/M
3300006323\|Ga0068497_1121464	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300006323\|Ga0068497_1202031	Not Available	738	Open in IMG/M
3300006330\|Ga0068483_1438936	Not Available	610	Open in IMG/M
3300006330\|Ga0068483_1460686	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006331\|Ga0068488_1296929	Not Available	718	Open in IMG/M
3300006331\|Ga0068488_1326812	Not Available	1463	Open in IMG/M
3300006336\|Ga0068502_1124484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2534	Open in IMG/M
3300006339\|Ga0068481_1098808	Not Available	3854	Open in IMG/M
3300006339\|Ga0068481_1123969	Not Available	2916	Open in IMG/M
3300006339\|Ga0068481_1173001	Not Available	2437	Open in IMG/M
3300006339\|Ga0068481_1216047	Not Available	1796	Open in IMG/M
3300006339\|Ga0068481_1296016	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300006339\|Ga0068481_1397642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300006340\|Ga0068503_10298959	Not Available	1221	Open in IMG/M
3300006341\|Ga0068493_10179449	Not Available	5238	Open in IMG/M
3300006341\|Ga0068493_10383619	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3595	Open in IMG/M
3300006346\|Ga0099696_1073020	Not Available	1194	Open in IMG/M
3300006347\|Ga0099697_1364597	Not Available	574	Open in IMG/M
3300006347\|Ga0099697_1429245	Not Available	535	Open in IMG/M
3300006900\|Ga0066376_10583114	Not Available	625	Open in IMG/M
3300007160\|Ga0099959_1123358	Not Available	644	Open in IMG/M
3300008223\|Ga0105348_1088974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium	923	Open in IMG/M
3300009173\|Ga0114996_10997293	Not Available	595	Open in IMG/M
3300009409\|Ga0114993_10308181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1204	Open in IMG/M
3300009706\|Ga0115002_10226611	Not Available	1440	Open in IMG/M
3300010883\|Ga0133547_11249512	Not Available	1414	Open in IMG/M
3300011321\|Ga0138361_1151106	Not Available	518	Open in IMG/M
3300020324\|Ga0211630_1119065	Not Available	530	Open in IMG/M
3300020375\|Ga0211656_10016336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2681	Open in IMG/M
3300020389\|Ga0211680_10047465	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300020389\|Ga0211680_10051665	Not Available	1875	Open in IMG/M
3300020415\|Ga0211553_10042803	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300020434\|Ga0211670_10523016	Not Available	507	Open in IMG/M
3300020435\|Ga0211639_10136367	Not Available	1029	Open in IMG/M
3300020449\|Ga0211642_10132921	Not Available	1075	Open in IMG/M
3300021065\|Ga0206686_1229955	Not Available	524	Open in IMG/M
3300021068\|Ga0206684_1016811	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300021084\|Ga0206678_10051327	All Organisms → cellular organisms → Bacteria	2219	Open in IMG/M
3300021978\|Ga0232646_1047106	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1511	Open in IMG/M
3300022227\|Ga0187827_10277169	Not Available	1091	Open in IMG/M
3300025194\|Ga0208205_111868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300025204\|Ga0208063_1046518	Not Available	535	Open in IMG/M
3300025265\|Ga0208467_1004446	All Organisms → cellular organisms → Bacteria → Proteobacteria	3232	Open in IMG/M
3300025265\|Ga0208467_1017811	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300026074\|Ga0208747_1089731	Not Available	629	Open in IMG/M
3300026080\|Ga0207963_1074847	Not Available	788	Open in IMG/M
3300026211\|Ga0208132_1055788	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	952	Open in IMG/M
3300026261\|Ga0208524_1058569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300026261\|Ga0208524_1080003	Not Available	897	Open in IMG/M
3300026262\|Ga0207990_1009161	All Organisms → cellular organisms → Bacteria	3504	Open in IMG/M
3300026268\|Ga0208641_1009428	All Organisms → cellular organisms → Bacteria	3733	Open in IMG/M
3300027700\|Ga0209445_1075859	Not Available	1070	Open in IMG/M
3300027827\|Ga0209035_10203003	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	990	Open in IMG/M
3300027827\|Ga0209035_10460382	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300027838\|Ga0209089_10097323	Not Available	1820	Open in IMG/M
3300027838\|Ga0209089_10539915	Not Available	624	Open in IMG/M
3300028189\|Ga0257127_1141660	Not Available	667	Open in IMG/M
3300028198\|Ga0257121_1159043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	754	Open in IMG/M
3300031605\|Ga0302132_10503983	Not Available	532	Open in IMG/M
3300031693\|Ga0302139_10293729	Not Available	668	Open in IMG/M
3300031701\|Ga0302120_10073434	Not Available	1418	Open in IMG/M
3300031701\|Ga0302120_10083637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Paraglaciecola	1312	Open in IMG/M
3300031802\|Ga0310123_10080380	Not Available	2276	Open in IMG/M
3300031811\|Ga0310125_10025355	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300031861\|Ga0315319_10603232	Not Available	543	Open in IMG/M
3300032019\|Ga0315324_10370347	Not Available	515	Open in IMG/M
3300032127\|Ga0315305_1183890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	77.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.35%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.54%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.67%
Inlet	Environmental → Aquatic → Marine → Inlet	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	49.53%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	16.82%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	11.21%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.87%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.87%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	40.19%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	16.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	11.21%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.41%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	5.61%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.80%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.87%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.87%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.87%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.93%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.93%
Diffuse Hydrothermal Fluid	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid	0.93%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.93%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000163	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 2000m	Environmental	Open in IMG/M
3300000260	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500	Environmental	Open in IMG/M
3300001570	Marine microbial communities from the Deep Pacific Ocean - MP2016	Environmental	Open in IMG/M
3300001780	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Supr46	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300004110	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006080	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid E	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300008223	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN8C Hudson Canyon	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011321	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300020324	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX555936-ERR599033)	Environmental	Open in IMG/M
3300020375	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020415	Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)	Environmental	Open in IMG/M
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025194	Marine microbial communities from the Deep Pacific Ocean - MP1494 (SPAdes)	Environmental	Open in IMG/M
3300025204	Marine microbial communities from the Deep Atlantic Ocean - MP0203 (SPAdes)	Environmental	Open in IMG/M
3300025265	Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)	Environmental	Open in IMG/M
3300025863	Marine microbial communities from the Deep Pacific Ocean - MP1788 (SPAdes)	Environmental	Open in IMG/M
3300026074	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026080	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300027700	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300028189	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135m	Environmental	Open in IMG/M
3300028198	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031693	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_33.1	Environmental	Open in IMG/M
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300032019	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515	Environmental	Open in IMG/M
3300032127	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun09P162000mDRAFT_10047647	3300000163	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYI
LP_A_09_P20_500DRAFT_10228373	3300000260	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISAYIK*
JGI12211J15759_1060621	3300001570	Deep Ocean	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPQYFWIILRYTN*
supr46_10043159	3300001780	Hydrothermal Vent Plume	MIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYE
Vondamm_101102761	3300001783	Hydrothermal Vent Plume	LTIEGRKTAKVDGGYGGGKNIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
JGI26060J43896_100212593	3300002913	Marine	MWRGISVGESTGRKTDKVGGGYDGDKYIKKIYNFVITYKYCWRGKDLNLRSSGYEFYVPLYYWLISTYTN*
JGI26238J51125_11001861	3300003478	Marine	LTIEGRKTAKVDGGCDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYY
Ga0008648_100383051	3300004110	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPP
Ga0066605_100068769	3300004279	Marine	LTIEGRKTAKVDGGCDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYHWLILTYLTDT
Ga0073579_11044041	3300005239	Marine	LTIEGRKTAKVDGGYGGGIYIKKENNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISAYIK*
Ga0066860_100380802	3300005399	Marine	AKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYCWLILTYIN*
Ga0066860_100381451	3300005399	Marine	TLTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYC*
Ga0066860_103310551	3300005399	Marine	LTIEGRKTAKVDGGYGGGIYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPP
Ga0066855_102679801	3300005402	Marine	NKTLTIEGRKTAKVDGGYGGGKNIKNVNNFSIPCYSWWRGQDLNLRPSGYEFYVPPYYWLISSYTN*
Ga0066829_100829481	3300005422	Marine	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0066851_100519953	3300005427	Marine	LTIEGRKTAKVDGGYGGGKYIKNVNNFSIHCYSWWRGKDLNLRPSGYEP
Ga0066851_102331582	3300005427	Marine	LTIDGRKTAKVDEGYDGGKYFKKVNNFAITCKYWWRGMDLNHLPSGYEFYVPLNYWLIPTYIK*
Ga0066839_102344561	3300005594	Marine	KTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0066850_100091455	3300005605	Marine	IDGRKTAKVDEGYDGGKYFKKVNNFAITCKYWWRGMDLNHRPSGYEFYVSLNYWLIPTYIK*
Ga0066380_101494961	3300005948	Marine	L*LNKPLTIEGRKSAKVDGGYDGGKYIKKVNNLAISCYSWWRGKDLNLRPSGYEFYVPPYYWLISAY
Ga0066379_102688091	3300005951	Marine	LTIEGRKTAKVDGGYGGGIYIKNVNNFSIHCYSWWRGQDLNLRPSGYEFYVPPYYWLISSYTTDTIY
Ga0066383_100985382	3300005953	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISSYTN*
Ga0066383_102530252	3300005953	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLIYSYTN*
Ga0066369_101136391	3300005969	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYE
Ga0066368_100296231	3300006002	Marine	TLTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYCWLILTYIN*
Ga0066375_100284172	3300006019	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISSYTN*
Ga0066375_102137721	3300006019	Marine	LTIEGRKTAKVDGGYGGGIYIKNVNNFSIHCYSWWRGKDLNLRPSGYEFYVPPYCWLI
Ga0081592_12447891	3300006076	Diffuse Hydrothermal Fluids	LTIVDIKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLLSTYIN*
Ga0081602_13211012	3300006080	Diffuse Hydrothermal Fluid	MIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYCWLILTYIN*
Ga0066836_106532071	3300006166	Marine	MK*LLYYFTIEGKKTAKVDGGYDGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLI
Ga0068504_11845311	3300006304	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0068470_10937321	3300006308	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCKYWWRGKDLNLRPSGYEFYIPL
Ga0068470_12327592	3300006308	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYPWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0068471_11313228	3300006310	Marine	LTIEGRKTAKVDGGYGGGKNIKNVNNFSIPCYSWWRGQDLNLRPSGYEFYVPPYYWLILTYIN*
Ga0068471_11385957	3300006310	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLIQLILVILAIE*
Ga0068472_104643751	3300006313	Marine	LTIEGRKTAKVDGGYGGGKYIKNVNNFAIPCYSWWRGKDLNLRL*
Ga0068472_106443952	3300006313	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWRRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0068473_16301352	3300006316	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPITG*
Ga0068497_11214644	3300006323	Marine	LLLNKTLTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISAYIK*
Ga0068497_12020311	3300006323	Marine	LTIEGRKTAKVDGGYDGGKYIKKVKNFAIPCYSWWRGKDLNLRPSGYEFYVPPYCWLISTYIN*
Ga0068483_14389361	3300006330	Marine	MLYYLTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLIPRYTN*
Ga0068483_14606862	3300006330	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPQYFWIIPRYTN*
Ga0068488_12969292	3300006331	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISAYIK*
Ga0068488_13268122	3300006331	Marine	LTIEGRKTAKVDGGYNGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPQYFWIILRYTN*
Ga0068502_11244841	3300006336	Marine	LTIEGRKTAKVDGGYGGGKNIKNVNNFSIPCYSWWRGQDLNLRPSGYEFYVPPYYW
Ga0068481_10988084	3300006339	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISSYTN*
Ga0068481_11239692	3300006339	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIK*
Ga0068481_11730013	3300006339	Marine	LTIEGRKTAKVDGGYGGGKNIKNVNNFSIPCYSWWRGQDLNLRPSGYEFYVPPYYWLISSYTN*
Ga0068481_12160472	3300006339	Marine	LTIEGRKSAKVDGGYDGGKYIKKVNNLAISCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIK*
Ga0068481_12960164	3300006339	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAILCYSWWRGKDLNLRPSGYEFYVPPYYWLLST
Ga0068481_13976422	3300006339	Marine	LRIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGQDLNLRPSGYEPD
Ga0068503_102989592	3300006340	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLLSTYIN*
Ga0068493_101794499	3300006341	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0068493_103836197	3300006341	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0099696_10730201	3300006346	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0099697_13645971	3300006347	Marine	MLYYLTIEGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISSYTN*
Ga0099697_14292452	3300006347	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYIN*
Ga0066376_105831141	3300006900	Marine	AKVDGGYDGGKNIKKVNNFAIPCYYWWRGKDLNLRPSGYEFYVPPYYWLILTYIN*
Ga0099959_11233581	3300007160	Marine	MLYYLTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLILTYIN*
Ga0105348_10889742	3300008223	Methane Seep Mesocosm	LTIEGRKTAKVDGGYDGGKYIKKVNNFAISCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN*
Ga0114996_109972931	3300009173	Marine	LTIEGRKTSKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEF
Ga0114993_103081811	3300009409	Marine	KYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLLSTDIN*
Ga0115002_102266111	3300009706	Marine	LTIEGRKTAKVDGGYGGGIYIKKANNLAIPCYSWWRGKDLNLRPSGYEFYVPPY
Ga0133547_112495121	3300010883	Marine	LTIEGIKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEF
Ga0138361_11511061	3300011321	Marine	IEGRKTAKVDGGYDGGKYIKKVNNFAIICKYWWRGKDLNLRPSGYEFYVPQYFWIILRYTN*
Ga0211630_11190651	3300020324	Marine	LTIEGRKTAKVDGGYGGGKNIKNVNNFSIPCYSWWRGQDLNLRPSGYEFYVP
Ga0211656_100163361	3300020375	Marine	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGY
Ga0211680_100474653	3300020389	Marine	MIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVP
Ga0211680_100516652	3300020389	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYHWLISSYTN
Ga0211553_100428031	3300020415	Marine	MIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLI
Ga0211670_105230161	3300020434	Marine	LTIEGRKSAKVDGGYDGGKYIKKVNNLAISCYSWWRGKDLNLRPSGYEFYVPPYYWL
Ga0211639_101363671	3300020435	Marine	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYV
Ga0211642_101329211	3300020449	Marine	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLI
Ga0206686_12299551	3300021065	Seawater	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLI
Ga0206684_10168114	3300021068	Seawater	TAKVDGGYGGGIYIKKENNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0206678_100513271	3300021084	Seawater	LTIDGRKTAKVDEGYDGGKYFKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPN
Ga0232646_10471062	3300021978	Hydrothermal Vent Fluids	LTIEGRKTAKVDGGYDGGKYIKKVNNFAITSKYWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0187827_102771691	3300022227	Seawater	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0208205_1118682	3300025194	Deep Ocean	LTIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0208063_10465181	3300025204	Deep Ocean	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYV
Ga0208467_10044465	3300025265	Deep Ocean	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYVPP
Ga0208467_10178111	3300025265	Deep Ocean	LTIEGRKTAKVDGGYGGGKYIKNVNNFSIHCYSWWRGKDLNLRPSGYENT
Ga0208833_10384091	3300025863	Deep Ocean	GGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0208747_10897311	3300026074	Marine	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0207963_10748471	3300026080	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLISTYIN
Ga0208132_10557883	3300026211	Marine	LTIEGRKTAKVDGGYGGGKYIKNVNNFSIHCYSWWRGKDLNLRPSGYENTDHA
Ga0208132_11273211	3300026211	Marine	MKXLLYYFTIEGKKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLR
Ga0208524_10585691	3300026261	Marine	LTIEGRKTAKVDGGYGGGKYIKNVNNFSIHCYSWWRGKDLNLRPSGYEFYVPSY
Ga0208524_10800031	3300026261	Marine	LTIGEDRKTAKVDGGYGGGKYIKKVNIFAITCKYWWRGKDLNLRPSGYEFYVPPYY
Ga0207990_10091611	3300026262	Marine	LTIDGRKTAKVDGGYDGGKYIKKVNNFAITCKYWWRGKDLNLRPSGYGPDFT
Ga0208641_10094281	3300026268	Marine	LTIDGRKTAKVDEGYDGGKYFKKVNNFAITCKYWWRGMDLNHRPSGSEFYVPLN
Ga0209445_10758592	3300027700	Marine	MWRGISVGESTGRKTDKVGGGYDGDKYIKKIYNFVITYKYCWRGKDLNLRSSGYEFYVPLYYWLISTYTN
Ga0209035_102030031	3300027827	Marine	LTIEGRKTAKVDGGYGGGKNIKNVNNFSIPCYSWWRGQDLNLRPSGYEFYVPPYYWLISAYIK
Ga0209035_104603822	3300027827	Marine	MIEGRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPPYY
Ga0209089_100973231	3300027838	Marine	IRGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLLSTDIN
Ga0209089_105399152	3300027838	Marine	LTIEGRKTAKVDGGYGGGKYIKIVNNLAIPCYSWWRGKDLNLRPSGYEFYVPP
Ga0257127_11416601	3300028189	Marine	LTIEGRKTAKVDGGCDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYENTDHTF
Ga0257121_11590432	3300028198	Marine	LTIEGRKTAKVDGGCDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYE
Ga0302132_105039831	3300031605	Marine	KYNRVINNLXLNKPLTIEDRKTAKVDGGYDGGKYIKKVNNFAIPCYSWWRGKDLNLRPSGYEFYVPSYYWLISAYIK
Ga0302139_102937292	3300031693	Marine	KVDGGYGGGICIKKANNLAIPCYSWWLGKDLNLRPSGYEFYVPPYCWLISTYIN
Ga0302120_100734341	3300031701	Marine	LTIEGRKTAKVDGGYGGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLIS
Ga0302120_100836373	3300031701	Marine	KPLTIEDRKTAKVDGGYDGVKYIKKVNNFAIPCYSWWREKDLNLRPSGYEFYVPPYYWL
Ga0310123_100803801	3300031802	Marine	LTIEGIKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEN
Ga0310125_100253551	3300031811	Marine	AKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYHWLISSYTN
Ga0315319_106032321	3300031861	Seawater	LTIEGRKTAKVDGGYDGGKYIKKVKNFAIPCYSWWRGQDLNLRPSGYEFYVPP
Ga0315324_103703471	3300032019	Seawater	LTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYYWLI
Ga0315305_11838902	3300032127	Marine	FFFLKIKPSTIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYEFYVPPYHWLISSYTN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092695

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences