NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001780

3300001780: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Supr46



Overview

Basic Information
IMG/M Taxon OID3300001780 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0094242 | Gp0056357 | Ga0013013
Sample NameHydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Supr46
Sequencing StatusPermanent Draft
Sequencing Center
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size179566894
Sequencing Scaffolds29
Novel Protein Genes33
Associated Families31

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1
All Organisms → cellular organisms → Bacteria4
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1
All Organisms → cellular organisms → Bacteria → Proteobacteria1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1
Not Available14
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodovibrio → unclassified Thiorhodovibrio → Thiorhodovibrio sp. 9701
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium2
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED2641
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationVondamm Vents, Mid Cayman Rise
CoordinatesLat. (o)18.35Long. (o)-81.85Alt. (m)N/ADepth (m)2000
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000245Metagenome / Metatranscriptome1468Y
F001651Metagenome / Metatranscriptome657Y
F005685Metagenome / Metatranscriptome393Y
F007771Metagenome / Metatranscriptome345Y
F010197Metagenome307Y
F012464Metagenome / Metatranscriptome280Y
F012465Metagenome / Metatranscriptome280Y
F013649Metagenome269Y
F020787Metagenome / Metatranscriptome222N
F032684Metagenome / Metatranscriptome179Y
F034217Metagenome175N
F042383Metagenome / Metatranscriptome158Y
F045802Metagenome / Metatranscriptome152Y
F054946Metagenome / Metatranscriptome139Y
F058220Metagenome / Metatranscriptome135N
F060977Metagenome / Metatranscriptome132Y
F061919Metagenome131Y
F062154Metagenome / Metatranscriptome131N
F062842Metagenome / Metatranscriptome130Y
F063198Metagenome / Metatranscriptome130N
F064726Metagenome / Metatranscriptome128Y
F069480Metagenome124N
F087396Metagenome / Metatranscriptome110Y
F087737Metagenome / Metatranscriptome110Y
F089571Metagenome109N
F092215Metagenome / Metatranscriptome107N
F092223Metagenome / Metatranscriptome107N
F092695Metagenome / Metatranscriptome107N
F095626Metagenome / Metatranscriptome105N
F096028Metagenome105Y
F097500Metagenome / Metatranscriptome104N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
supr46_1001327All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium11051Open in IMG/M
supr46_1002239All Organisms → cellular organisms → Bacteria8176Open in IMG/M
supr46_1003363All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6158Open in IMG/M
supr46_1004315All Organisms → cellular organisms → Bacteria → Proteobacteria7988Open in IMG/M
supr46_1005408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4793Open in IMG/M
supr46_1010550Not Available2587Open in IMG/M
supr46_1014839All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1982Open in IMG/M
supr46_1015450All Organisms → cellular organisms → Bacteria1918Open in IMG/M
supr46_1015458Not Available2397Open in IMG/M
supr46_1016627Not Available1808Open in IMG/M
supr46_1023537All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodovibrio → unclassified Thiorhodovibrio → Thiorhodovibrio sp. 9701387Open in IMG/M
supr46_1029155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1177Open in IMG/M
supr46_1029956All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED2641153Open in IMG/M
supr46_1032270Not Available1088Open in IMG/M
supr46_1033544All Organisms → cellular organisms → Bacteria1055Open in IMG/M
supr46_1037371Not Available973Open in IMG/M
supr46_1045501All Organisms → cellular organisms → Bacteria838Open in IMG/M
supr46_1046819Not Available820Open in IMG/M
supr46_1049134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium790Open in IMG/M
supr46_1051368Not Available763Open in IMG/M
supr46_1053940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria735Open in IMG/M
supr46_1057145Not Available702Open in IMG/M
supr46_1057224Not Available701Open in IMG/M
supr46_1061489All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2662Open in IMG/M
supr46_1063336Not Available646Open in IMG/M
supr46_1073280Not Available567Open in IMG/M
supr46_1073317Not Available566Open in IMG/M
supr46_1074497Not Available557Open in IMG/M
supr46_1080778Not Available513Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
supr46_1001327supr46_10013276F089571MFIIYLDKENERKMLKNIIVIVFSVLFLVVPASSQHVQQKYAITDKDEKVILNDNGTWEYAEEDKQNYYYKKVPPKTYNYEFKSQTWEERIEQAAHEYWRIRAHAELEQLGIPVTRYDPTTSDVPLYLKLEGGRIRTDLDSFTPLARGEVIDISGLWDPDKGDNPTLKIQGKLFLQITMKLDDQKKLFSQYNQRNYIPIPDDFQRILEFRDSLDVISLGMHDYNRDNTHIWPGIPHSFLYAPPGSYYDPNNPPIIHGDGFPYIQRGHLTLSRREIPMTNSVYDNLLKRIDNLEGHGPIKIRYDMGKGIIETVTFEEVWLKINPYNGDPTHILKNVSLKKLE*
supr46_1002239supr46_100223913F095626IDLNMDLQRRLKRLRCTAFPYFLDTISPISGLELLLYLNDKSLKYRDFEAFIILENADEESECFN*
supr46_1003363supr46_10033632F062154MQSRRNAVDANGVKVLSVVNARPEQPVNSVANGVRAPSVVNARPERLVNRVVNGVRVPSVVNVRPDLVVSVVRVDHSSVAAVVREAQVVFCGCSL*
supr46_1004315supr46_10043159F092695MIEGRKTAKVDGGYDGGKYIKKVNNLAIPCYSWWRGKDLNLRPSGYE
supr46_1005408supr46_10054081F010197NLFLLPNATHELKVFTIKHDLTQHVKNILSRKDGIFFF*
supr46_1010550supr46_10105502F058220MQIFVDCDDTLILYDSHTGVHPYGVLNGDPWHPNQPLVDALLETEHPVFVWSGGGAWYAGIIAGKLGLDFPCLDKDETTFEVIQEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPNQL*
supr46_1014839supr46_10148394F069480MRPMPNYIELIDRIYILESRNNIKRVEGNAGQILDEAPKNKPYNTVKTVFFSVFKPVVFPENIQVF
supr46_1015450supr46_10154502F042383MKGIKMETTYNNFPSPDDFYEGPSDEELKKIEEDLERYSD*
supr46_1015458supr46_10154581F092215MGAFLMSQTPNDIALAETFHHSEDISGIRQGAGLIQLTEAHYAPFVDDDYCPLAGPALLVPKVIRLADLALRMEVGQLGIGKATERCAPSTVGRNCVATYAQDLSIIILEPLVFLSERGRLRGSTRGEVEYVERKNNYLLALVVGQGNVPIGGGKF
supr46_1016627supr46_10166271F096028VSHITISVDFRVDWASFELIDGDFHSHSFGGRVKRNDLMLEKN*
supr46_1023537supr46_10235372F064726MTATQKDSTATANNKRKFRSPNRVLARSFRLARDKWKQKYMELRANLKSARQLATERGTSRNLWRAEYDAANQRAIQAEALAQQRLDKLEQLRSEHQELKKNESSRQS*
supr46_1029155supr46_10291552F045802MKDLECSVHGTALVEKEVPVFYGMPTPDSDICEIGRRFPHHGLWSIGGCEVSDDSPENTIGQVCSDCHDAAKKM*
supr46_1029956supr46_10299562F013649MSSILEKELSILERLPSSRRMREHDEAGKSSKKHPKKHHYDEHFNKDWDADLWD*
supr46_1032139supr46_10321393F020787CNHMPKVRFEIYSTERGKKLIDLGELLVESGYLRSFVLDEEGTEVVFNFEVNAGFDVEKGEIDMGELGSYFDAADGVGKKFTDELLRSVFDLDDTGHIWES*
supr46_1032270supr46_10322701F097500KEIFYSQRDKDLFRSHILILIHQEQESKKFKRKLFLALFLGIGTLSLLFSRISEIANDFTVGLSDAITGDILTTVVFSYGLLFALLALLKKPDFIFN*
supr46_1033544supr46_10335442F087396GFLLDDSTLVNSHILPYVLIVASILERRTIRREELIAALRKSMRQRSIDRRPRREYVLRFLKQHPP*
supr46_1037371supr46_10373712F092215MSQTPNDIALAETFHHSEDISGIRQDAGLIQLTEAHYASFVDDDYCPLAGPALLVPKVIRLADLALGMEVGQLGVGKAAQRCAPSTVGRNCVAAYAQNLSIIILEPLVFLPERGRLRGSTRCEVEYVERKNNYLLALVVGQGNVPIGGGKF
supr46_1045501supr46_10455011F060977NDVNVSVGGATFGVDQGGNKVSVGVSGLTFSTSDTVDFGVAYSTSLLGGLEAGLSYDYTNESDHVVGVDTSFEYVGINLDADFDWNITDTDFDAKLGTGYTLLGVDGSVTSKWDVDDFSYEGMDVTAGYTWNVTDTFSVRPNVTVPFDDDFTRGDLTAGVSISLSFGGTSTE*
supr46_1046819supr46_10468191F000245MKTFKEYSLDRKLDKYVIDAIKKKKLAKHPVNATDDIKMRMKPNKPAFKFPSPTGSMMIHVWLRKMTPSKGQPKGMMAFNYQLEDK*
supr46_1046819supr46_10468192F005685MKKFNEYSSFEDKILATLKRGPCDLMSLSHKLKEDIMPVSSMLEHLKVYDKVEMYKEKWQIKRTKKN*
supr46_1047653supr46_10476531F087737IPRILASEDLEIIHPSLFDRTITGFLISEGLNNLSQDT*
supr46_1049134supr46_10491342F001651MTIGGKPIPEGGYIVALQNGKKIALAQRRHRVIQAKIEGRSEAEIAEQEGVAQYTIWKDIRAYLGEVRREDKEAVQAEYDLQRARYERLLLRWWDHAIGEDSDHAARATGIVLDILRRLDTIGGLIPEKPLIQLQQQNVMVGGVTFADLVREARGSAGG*
supr46_1051368supr46_10513682F034217VITITTAVMADHTPNAAKSNSAMFYLVNRDKINTLEI
supr46_1053940supr46_10539401F061919LPLILFTTTVSAAAPCNFDSKDSVIYEGKLESVRLIKKDIQFNPQIKDVLKCVMSIEARVKGKWYPSKGEYMFGPDMSQEDACGLAENRAKVKVMREVIPETLKSEKNLKCDLTNVRKSCKVIYMNVVMTDFGNQRVKMETCEK*
supr46_1057145supr46_10571451F063198RLEENSLISEDRLILNAPSKIRINRVKVVNTGATEARSSGDVYPNPLGPIRNPSIIRNKTSGMFVRRNNASDKKPKIAIKLNASNAVLTFKILGEY*
supr46_1057224supr46_10572242F063198RLEENSLISEDRLILNAPSKIRINRVKVVNIGATEARSSGDVYPNPLGPIRNPSIIRNNTSGILVRRNNASDKKPKIAIKLNASNAVLTFIALR*
supr46_1061489supr46_10614891F007771MKTIIHAKSIDKKVRLALYGMLHHSATKLFPRRMKYVSIKLHLKHYVYDGVAMIEEDTKITNPRNFKIIIDPYRLEKDDWGRELNYSEWVSELLRTLAHEMVHVKQYIMGELTFQKGQMCWKKQKVDFKSGEDYYFSPHEVEAYGLEKGLQLGYTATWNKIETEKENG*
supr46_1063336supr46_10633362F012465ERKVEEVIRSEKPLTEDVVDQLRSVVKKKKESDIKFKSGTSVPIDPESAKTILKTFDSLNSSNKKKMQDNMNKDTKSFLKILDFAFSNAK*
supr46_1073280supr46_10732801F092223TTINSKEDIIMADTSINKGLILSLLVGFLIQAGGFIWWMSGLNSEVQRLASIQGSAIPALEAEAKLSGITIQNNEAAIKELQEHDKAISGLDVLNFKVEQLRDEIATLREVNREIMTQHEKIFDWMSMNSGGNSGGGSNPYGSSYGN*
supr46_1073317supr46_10733171F012464VAVIVAVPSATEVTNPADETVATDAADVVHVTVASDIVVPAASFTVAVSVAVSANEANERLVGDSVTEDAT*
supr46_1074497supr46_10744972F054946LAFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGFGLGSFFVWIDIG
supr46_1078879supr46_10788792F062842MKWMIIGVLASALSLNGCADTADAETSAAITAPVENQEGTTTTSSSETIWIAIVMTWRPVTYTIDKEFSSELDCWNYYDSGVGESKMLNNYGTQVLDH
supr46_1080778supr46_10807781F032684INPKIIANNNNITQLYWLIQINEACPLNITKRTKKVMLLLCTLRILALIDKFKSNSFLFKAEEVMFLPLGIITKNTLKNIMHPKIRPTDKKANLDPKIFVKQNEITAPIMSNTTGKIILLFINLDLQIRS*
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