Sample 3300011321

3300011321: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)

Overview

Basic Information
IMG/M Taxon OID	3300011321 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0119846 \| Ga0138361
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	114204208
Sequencing Scaffolds	54
Novel Protein Genes	56
Associated Families	43

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	32
All Organisms → cellular organisms → Eukaryota	2
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	3
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium MedDCM-OCT-S08-C235	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	1
All Organisms → cellular organisms → Archaea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002093	Metagenome / Metatranscriptome	594	Y
F002753	Metagenome / Metatranscriptome	532	Y
F003320	Metagenome / Metatranscriptome	494	Y
F004550	Metagenome / Metatranscriptome	433	Y
F005193	Metagenome / Metatranscriptome	409	Y
F005948	Metagenome / Metatranscriptome	385	Y
F006551	Metagenome / Metatranscriptome	370	Y
F010325	Metagenome / Metatranscriptome	305	Y
F012639	Metagenome / Metatranscriptome	279	Y
F012780	Metagenome / Metatranscriptome	277	Y
F013699	Metagenome / Metatranscriptome	269	Y
F015413	Metagenome / Metatranscriptome	255	Y
F020371	Metagenome / Metatranscriptome	224	Y
F020602	Metagenome / Metatranscriptome	223	N
F021393	Metagenome / Metatranscriptome	219	N
F024127	Metagenome / Metatranscriptome	207	Y
F025846	Metagenome / Metatranscriptome	200	Y
F030135	Metagenome / Metatranscriptome	186	Y
F030551	Metagenome / Metatranscriptome	185	Y
F031929	Metagenome / Metatranscriptome	181	Y
F036429	Metagenome / Metatranscriptome	170	N
F045802	Metagenome / Metatranscriptome	152	Y
F050311	Metagenome / Metatranscriptome	145	Y
F054946	Metagenome / Metatranscriptome	139	Y
F060038	Metagenome / Metatranscriptome	133	Y
F060053	Metagenome / Metatranscriptome	133	N
F062832	Metagenome / Metatranscriptome	130	N
F063612	Metatranscriptome	129	Y
F067833	Metagenome / Metatranscriptome	125	Y
F068928	Metagenome / Metatranscriptome	124	Y
F072260	Metatranscriptome	121	Y
F074005	Metagenome / Metatranscriptome	120	N
F077170	Metagenome / Metatranscriptome	117	Y
F082528	Metagenome / Metatranscriptome	113	Y
F090441	Metatranscriptome	108	N
F092695	Metagenome / Metatranscriptome	107	N
F093742	Metatranscriptome	106	Y
F093997	Metagenome / Metatranscriptome	106	N
F095351	Metagenome / Metatranscriptome	105	Y
F097512	Metagenome / Metatranscriptome	104	Y
F099485	Metagenome / Metatranscriptome	103	Y
F099846	Metagenome / Metatranscriptome	103	N
F105006	Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0138361_1003081	Not Available	1116	Open in IMG/M
Ga0138361_1004438	Not Available	567	Open in IMG/M
Ga0138361_1006039	Not Available	535	Open in IMG/M
Ga0138361_1006087	All Organisms → cellular organisms → Eukaryota	500	Open in IMG/M
Ga0138361_1015470	Not Available	514	Open in IMG/M
Ga0138361_1016175	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
Ga0138361_1022217	Not Available	965	Open in IMG/M
Ga0138361_1024379	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	519	Open in IMG/M
Ga0138361_1027716	Not Available	738	Open in IMG/M
Ga0138361_1030808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	515	Open in IMG/M
Ga0138361_1032735	Not Available	546	Open in IMG/M
Ga0138361_1034746	Not Available	508	Open in IMG/M
Ga0138361_1040380	Not Available	503	Open in IMG/M
Ga0138361_1044754	Not Available	518	Open in IMG/M
Ga0138361_1044934	Not Available	684	Open in IMG/M
Ga0138361_1048498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	528	Open in IMG/M
Ga0138361_1048914	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
Ga0138361_1059797	All Organisms → Viruses → Predicted Viral	1757	Open in IMG/M
Ga0138361_1064941	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium MedDCM-OCT-S08-C235	508	Open in IMG/M
Ga0138361_1084442	Not Available	505	Open in IMG/M
Ga0138361_1086021	Not Available	531	Open in IMG/M
Ga0138361_1088081	Not Available	886	Open in IMG/M
Ga0138361_1089806	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	693	Open in IMG/M
Ga0138361_1091316	Not Available	551	Open in IMG/M
Ga0138361_1098679	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1983	Open in IMG/M
Ga0138361_1109255	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	782	Open in IMG/M
Ga0138361_1116480	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	567	Open in IMG/M
Ga0138361_1120140	Not Available	607	Open in IMG/M
Ga0138361_1122431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	537	Open in IMG/M
Ga0138361_1123977	All Organisms → cellular organisms → Eukaryota	545	Open in IMG/M
Ga0138361_1128098	Not Available	986	Open in IMG/M
Ga0138361_1128656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	697	Open in IMG/M
Ga0138361_1131030	All Organisms → Viruses → Predicted Viral	1231	Open in IMG/M
Ga0138361_1132163	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	732	Open in IMG/M
Ga0138361_1134806	Not Available	542	Open in IMG/M
Ga0138361_1135141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	527	Open in IMG/M
Ga0138361_1136144	Not Available	1152	Open in IMG/M
Ga0138361_1136746	Not Available	1362	Open in IMG/M
Ga0138361_1137955	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	859	Open in IMG/M
Ga0138361_1144861	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	731	Open in IMG/M
Ga0138361_1148592	Not Available	864	Open in IMG/M
Ga0138361_1151106	Not Available	518	Open in IMG/M
Ga0138361_1155007	Not Available	675	Open in IMG/M
Ga0138361_1155775	All Organisms → cellular organisms → Archaea	851	Open in IMG/M
Ga0138361_1159805	Not Available	566	Open in IMG/M
Ga0138361_1167366	Not Available	562	Open in IMG/M
Ga0138361_1175135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1071	Open in IMG/M
Ga0138361_1178751	Not Available	827	Open in IMG/M
Ga0138361_1180770	Not Available	520	Open in IMG/M
Ga0138361_1182310	Not Available	501	Open in IMG/M
Ga0138361_1186617	Not Available	563	Open in IMG/M
Ga0138361_1188630	Not Available	552	Open in IMG/M
Ga0138361_1191237	Not Available	536	Open in IMG/M
Ga0138361_1191835	Not Available	955	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0138361_1003081	Ga0138361_10030813	F002093	MAYDTSIPAGGHANFVTPNLAHEGEGVRVDFLTVDYITAVNGETTHPYASAATAGLKLTMDAIQNQGVNILGMGALGNSNTEQTFMVRADSLDTISSTTTVAAVQAAIRALDAMTPDKVTATISSATAADRDMGDTAL*
Ga0138361_1004438	Ga0138361_10044382	F012780	VLQSLDIQTKRMVGEVMTLMEASLSDTLATTALKKSIKQALWRTSRNIQDDLNSMSFKNMEE*
Ga0138361_1006039	Ga0138361_10060391	F090441	TLSFLDSLAFGALITRRAIVGCQFPDAASYRKNDCDKFRSRSGT*
Ga0138361_1006087	Ga0138361_10060871	F002753	VFEIESVKLTDSDRFTPAVFEIESVKLTDSDRFTPAVFEIESVNLTDSDRFTPAVFEIESVKLTDSDRFTPAVFEIESVNDTDSDRFTGAVFETESVKLTDSDRFTPAVFETESVKLTDSDRFTPADFAIESVNDTDSVRFTPAAFDVSSVNDTDSVMVTVDFVFS
Ga0138361_1015470	Ga0138361_10154701	F060053	IISTRRIPIAGTTTITKGNVCELVGGYLANSPTTATVDVNHFVALETIDNSGGSAGDLSAPVAVSGHYVTVVADGAIRPGARLQISASTAGQVITTGGGGNKQIGWYTGKEGGIIAKAATTPFQETFTDDSDFPPVAAADGDIIEIYLGL*
Ga0138361_1016175	Ga0138361_10161751	F093742	PWNRLADPKFVVERKFRREKPIKSRHPLGKYAIPGDVAVGCYIEHAYADKNVAVDFILPHEISKERLASNDLNFFLIYDLIEAFHTDKSKDKKCYKARKQCLEESDNIFPPYKYQQLIFSKIKYYNYLMDNNVSIAPTLTMTTEQYADMGKEAAVNLILETCMNEEWGRLICKPVYGQEGIDAKFFEITHEKSLGNYLERCMKKYPGIVIQKVIEGFGDSKKSPELRMYYVGNQYQYSVCANDNCVVRPKQEGGGFETPLNSLKNKTRKILRKLPKMVMPNGKKLPRLLTRIDMGYIVDGKYSPFVNEVEFVPSLYAEDCAHHPERLIDKNLGDQMVKISKIYVKQMQKK*
Ga0138361_1022217	Ga0138361_10222171	F090441	DFIKGEVWELATLSFLDSLALGAPITRRVIIGCQFPDAASYRKNDSDMFRPHSGT*
Ga0138361_1024379	Ga0138361_10243792	F005193	MKITNALFESKQYFETIGKIHKSDQLSVMDAYRINRLVKKLNELNTEYDELKQKIFTQYGTSGKTEGTIEVGPENREAFAGEYNDLISIEHDLETEMLVFPSKLEDGFSAADLNIMEMFFDL
Ga0138361_1027716	Ga0138361_10277162	F030135	ATLSSFTDIWHSTFAGCQFPDAILPGKEAFDLVAGPLN*
Ga0138361_1030808	Ga0138361_10308082	F045802	MNTLKAERSRVANMTTDLVCPVHGTELVDKKVPVFYGMPTPDSDIFEIDSRFPNHGLWSLGGCEVSDDSPENGIGLVCSDCHDAAKKM*
Ga0138361_1032735	Ga0138361_10327351	F074005	MVQIKTIDELEALYYGHNRNLLRKADAPVTTSTVGTFNAIFGAYAWAQLNLEANAFGILPKY
Ga0138361_1032735	Ga0138361_10327352	F093997	DDVGAKVTVPRDPYPQGVQAGLDDDRSGEDKPASDRGGLKMQKKSDEDTELIEKAEHSFSTETPRPNASIENVDKSIKDSSLILKDARAEGYEGLSQVARNILNGKYYVPSDDEVRGF*
Ga0138361_1034746	Ga0138361_10347461	F003320	MAYSTDNPVKKIAQMGGSNSLWYYTDGDAIGTIVADNYFLADYQQLTAGDVILVNSGGSNAVMDTIIVSVQDGGTNLDTVIEA*
Ga0138361_1040380	Ga0138361_10403801	F105006	MAMNKFTLLNSNGVARPGFYIEIIQFPNGSTPGQAVYVDGRGTEDRINFLYNPQTDLLDAWHIKSPENKFSMTPITVSNRVVGLDVRFAHIPNFVAHFALDLSTEEEEVVYDVLAPPVHLAEIT
Ga0138361_1044754	Ga0138361_10447542	F031929	GLSVNSDDAQLIDVSKSGAVSGISFESSFEYDLANDGAYWLRGVVTPDFAKGAYGIIGYNSDEEVTYGIGYNASDNFKVATELSGDGDTVIRFSYSF*
Ga0138361_1044934	Ga0138361_10449342	F010325	MFRKEMVSNKLDQLQLAVERLKSSLVVPIDPGDKGTPFEVILQQLQQIENQIDQIVNLIELEED*
Ga0138361_1048498	Ga0138361_10484981	F050311	FATPTLAGSSDFSGIFIAAHAELNVVAIDGTNTTGKGSDSVNRQGGSDNKETTSGTIGGFAPTAGYEIGFNMPLGDTFFVTVGYADGGGKSAAIAKVDDANGTTDVSLHASNPSWWYIAPAISIFDNSAVYFKIGQAKAALKAIGDITGAPGNLTGDMWGIGTTSIANNGLFIKT
Ga0138361_1048914	Ga0138361_10489145	F045802	MKDLKCSVHGSALVEKEVPVFYGMPTPDSDIFEIGSRFPHHGLWSLGGCEVSDDSSNNTIGRVCSDCHDAAKKM*
Ga0138361_1059797	Ga0138361_10597972	F099846	MSTYLGLRTIDELVNYTYNRTPDEIMKAGFSTTDPGVGGNYNPLFGAMAWANFNLEANIFAALPKYVWDFSGWRIFSAKAGLYTPTSALAEFGGTQEGGAIAPAIKPTVEEVTVKPKTLQYVFEASELLEQLVDNSRDDNYGSLAQQRVYASDQFKERVNTMLTRIPTNVAATDTSQQLDLESLDRIVASFAEYTFEAHSTVADNYDPWRLANGNGIDRATDSTYDATVKSPSGTIGTADVLTDAILRQTLSDVRIAGGKEPTVFIGGQDTYAEVQSIYMNAYRIQNTADLRTEFSVGVNGVDTFTGTGAGLHISTIYGLPFIPSKDTTQSAEGSVGDLFVLNTSADKNAPNKPLIGIQVLKPIVYYEAGKRQQGYPFINEAFNDRALYNMLAETTCRNFKAQAKVRDIASGI*
Ga0138361_1064941	Ga0138361_10649411	F060038	MAYATSNPIKKVSQMGESNSLWYYTDGDSIGTIVGS
Ga0138361_1084442	Ga0138361_10844421	F072260	ENWGRFICKPVYGQEGIAARFFTATQKKSLANYFARCMKKYPGIVIQKEIKDFGNSKKSPELRMYYVGKKYQYSVCANDNTVVRPRQEGGSLDTPLDSLKARTRKILRKLPPIVMPNGKSLPRLLTRLDMGYIVDGKYSPFVNEVEFVPSLYSEDCAHHPDRLIDAAM
Ga0138361_1086021	Ga0138361_10860211	F060053	GALVDMAFGLIPAGTITRETIISTRRIPIAGTTTITKGNVCELSGGYLANSPTGVNADVNHFVALETIDNSGGSAGDLSAPVAVSGHYVTVVADGAIRPGARVQVSASTAGQVITAAGDIDQQIGWYTGKEGGTIAKDSSTPFQETFTDDSDFPPVAAADGDIIEIYLGL*
Ga0138361_1088081	Ga0138361_10880811	F020371	AAVDIVNVWETVLGKQDRTYAGKNLAKEIAVPNLLISIDTATKFSGMTQLDEGQLGQLKELTYTRSTFEANKYGLKFVIHEEARLKNVHNVLQDSIQVASNKVEQRQSFDVVTLADASLTAKAAIGVWDTFVASADRSTNNPLLDLGIVQLLIEGSGVGGKLSRIGMHPLDFAKYTGNTFIRGVASTKPSEVTFEPGTRELPGFPNAGLVLDNAIRQGDVYCVDTEKEPTIALFQGPQRIGSAHDEETGDDKYFIIDYHLASIIQSETGRQITGISTPSDWT*
Ga0138361_1089806	Ga0138361_10898061	F025846	HVMVQQTAMTDQMKPIVAILHHVKTKVCGIVAMANVFQHHMYVMAQVNSVTQAGLQTVLMVQMKA*
Ga0138361_1091316	Ga0138361_10913161	F105006	MNKFTLLNSNGVARPGFYIEILEFPSGNTPGQAVYVDGRGTDDMINFIYNPETDLLDAWHIRSPDNKFTMTPITVSNRVVGLDVRFTHIPDFVAHFALDLSTDEEEVVYDVLAPPVHLAELTSVNF*
Ga0138361_1098679	Ga0138361_10986791	F054946	LVFLYNSDYERCVPHPPQNFAVGFSGFPQLLQDEDV
Ga0138361_1100609	Ga0138361_11006091	F036429	MATTKSVEITNLDATPRTTLEAASAGGKLRVWMDTYAASTGDLDDDDIVVMAQVPSNAKIVSLMIYNDDLNSGSGTHNVGLYNGPQAYTISGTQTDAAAVIDEDCYVTDSTAFRAAVTEPVELLAETRDINAIAQFVWEDGGLAEDPKVPLRIAVTMSATGTAIAGDITMVVLYAVD*
Ga0138361_1109255	Ga0138361_11092551	F024127	IEMIYKLTPKKSRDVKTLIEAETEKAAILYFAALLHLSADDLLQIYKIR*
Ga0138361_1116480	Ga0138361_11164801	F012639	MSSNNSGLVLACSAAYAAAAPVATVIAATMQTDPTVAVVTELQVPLTENWIATDVYILAATGAGTPTVINPVISMDKNRGRKLVQTPPLSSMLITNNTRPRFSPQPIGFEGGSIVRMFATSTVVNG
Ga0138361_1120140	Ga0138361_11201402	F013699	MSDYKAGYKTEVARWQIVPRERTEYEEYLKTHDLIDLKSRIVRGEPNPIDPTYGGIGYTYYMPETRDLGRVKVSLVERWNWKFEWEDVNIG*
Ga0138361_1122431	Ga0138361_11224311	F050311	SIVSVLITSRERKNIMKALRTKICAYAIALLASIGFATSTLAGSSDFSGIFIAGHAELNVVAIDGTSRTGAGNDGSSGANSGGSDNIEVTSGTIGGFAPTAGWEIGFNLPLGDTFFVTLGFADGGGKSAAIAKVEDQNNTTDVSLHASNPSWWYIAPAISIFDNSAVYFKWGQAHADL
Ga0138361_1123977	Ga0138361_11239771	F002753	VRFTPDVFEIESVNNTVSDRFTPAVFEIESVNNTVSDRFTPAVFEIESVNNTVSDRFTPADFAIESVKLTDSERFTPAVFDIESVNNTVSDRFTPAAFDIESVNDTDSDRFTPAAFAIESVKLTDSERFTPAAFEIESVKLTDSESATLFTWVSEIESVKLTDSESVTLFTWVSDIASVK
Ga0138361_1128098	Ga0138361_11280982	F030551	MKNSIRNLIITAALVTGMFGIVNAQTEVSGEFSSDVTVGDATAFSTPYTGLSISGDGWELSTNLSDGDVIVEEAKYNWAISDAITATFGSQAEPYGIAWGSHRPSGNSFVSAPRDHSISDGVGVSAAAYGVGVNAFYGDDNYWAARASYDVSAFGINSTIGLSVNSD
Ga0138361_1128656	Ga0138361_11286561	F004550	WDVTDTGSGYQVIDYAGGWLRVGDGAPASGEVNGISGKEVWNYNANKLWYYETRISLSDVTEGNFFVGFADNGFVDPATVPTDCIGFSHLEDTTTIQFLSRKNSGGVSFDMLEAGSTFAMLDSTVATQDATTFEMPSNSVRLGFLFQPVGSDLTTTAVQFKLFINGTVSGTQAATTVPDDIALELKMFLENKGTVANDLSTDYIQTVQQR*
Ga0138361_1131030	Ga0138361_11310301	F050311	MKALRTKICAYAIALLASIGFVTPTLAGSSDFSGIFIAGHAELNVVAIDGTHTDGQTHATDQLGVTQGTIGGFAPTGGLEIGFNLPLGDTFFVTLGYADGGGKTAAIAKSKSPDGNSDVTIHASNPSWYYIAPSISVFDNSAVYFK
Ga0138361_1132163	Ga0138361_11321631	F082528	ETLETVGDSGMLDMLMDNIMYIGGAAVLVALACAVAWMKVPAFRLMARKMYAKFMRQHRDEMEELYEKYLTKAMKAKLNATQKAKVQAAILEKAILAEVDHTVAKTSAAIAKEIRDMAKKL*
Ga0138361_1134806	Ga0138361_11348061	F006551	TIGTNGVLTDDTLRAFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIPNPYGESLVQIDVNGIQSFKGTGVGIHVDSIYGIPFIPSKDAPSSSSDSSEVGRLFAFDTSDAEGYGYPRIGIQIAIPTEYYEATRRSPGYPFVNNAFVEKGVFRTMGETVCRHFRSQGKIRDIKL*
Ga0138361_1135141	Ga0138361_11351411	F095351	LYAAHINAQGGDGNYIIRALVPYDLGETGGTAGPGSTGNTWAETVTSSGTAGYQNSKISAQTVPDNTTVCLYGFVDSTEMGQNVSQLRITSGQGVRAIWDLFPIIGSDPAVSGSVRCRTMYAMTPVIITRNINVKIEYFIRPSNPSLTRGVEIALLGLTCEGSGGNIQP*
Ga0138361_1136144	Ga0138361_11361441	F003320	MAYATSNPIKKISQMGASNSLWYYTDGDAIGTIVGADYFLADYTQLTAGDMIFINSGGSNAVVDTIIVSASTSS
Ga0138361_1136746	Ga0138361_11367461	F093742	MNVPNLLVPPHRRGTKRGRSASLSAVRPPKKARTERSKSVSAAGRKLRIGILLTYPKLEVKKEELISHKPRSSLRPWTKLAPKDLIVQRKFRREKKVTRHPMGKYAIPTDVSAACYIQHAYKGKNVEVDMILPHEISEERLKSNDLNFLMIYDILEAFHTDKTVGKKVYHTLKKCLDSADNVYPPQEYSELIYSKIKYYNYLKDNGIAIAPTITMTSEEYKTMGPEAALESILSHANVESWKRFICKPVYGMEGIDATFFEPTHKKKLGKYLERCMKKYPGIVIQKEIPNFGNSKKSPELRMYYVGNKYQYSVCANENTVVRPRQEGGGLDVPLVSLKRRTRSILKKLPKIVMRGKQLPRMLTRLDMGYIVDGKYDPFVNEVEFVPSWYSEDCAHHPDRLIDRSIGDQMVKITKMFVKA*
Ga0138361_1137955	Ga0138361_11379554	F067833	VKTKVYGIVAMANVFQHHMYVMAQVNSVTQAGLQTVPMVRMKA*
Ga0138361_1144861	Ga0138361_11448612	F012780	MRYVYENGVLQSLDIQTKRMVGEVMTLMEASLSDTPATTALKKAIKQTIWRLNRALQTDVNGMAFKNMEE*
Ga0138361_1148592	Ga0138361_11485921	F063612	SVAGGSPADDAASVAEESGLKIPRRGTGSKEDVYSPAL*
Ga0138361_1151106	Ga0138361_11511061	F092695	IEGRKTAKVDGGYDGGKYIKKVNNFAIICKYWWRGKDLNLRPSGYEFYVPQYFWIILRYTN*
Ga0138361_1155007	Ga0138361_11550072	F077170	VVSQDTAQWMAKKQGKVKRFLGGNIAELNLEVPAGAEKVTLYDQTDGSELIVPKYDADRLVNLSFTTTEDREDGTFVTHKDPTRKHFAWTPPPEIESSVGSAAETVSKISGKRRKRGKRGRR*
Ga0138361_1155775	Ga0138361_11557751	F099485	HNWQHSPPKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD*
Ga0138361_1159805	Ga0138361_11598052	F005948	VSFNSDTLIKGGHGVLVAVFVTKKGSGSNKVEFRNGTTASATPVECSIFTAIEGNYQNIHRRFENGIFADCDGSAEVTVVFK*
Ga0138361_1167366	Ga0138361_11673662	F015413	MLMESIELEKQVETLLATPQFAQPEFEMPLLKEVFSKSMLVSAAGTALSVQLGNVVGRFLPIAMLPTGSASILAGILMVKLGGSNKLLKDLSLGIIQGGIATAMTPFTSGLIPQQFSQEVKTETT
Ga0138361_1175135	Ga0138361_11751352	F050311	MKALRTKICTYAIALLASIGFATSGFAGSSDFSGIFIAGHAELNVVAIDGSSTTGAGNDGTAAGTGGSDNKETTQGTIGGFAPTAGYEIGFNMPLGDTFFVTVGYADGGGRSAAIAKVDDANGTTDVSLHASNPKWW
Ga0138361_1178751	Ga0138361_11787511	F068928	VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGRRN*
Ga0138361_1180770	Ga0138361_11807701	F021393	INSETQVDTVEKTDQRVETEKSFQETVKSGIDTLTEVVQSIAESQLASTEAITGLANRVKALEKPTDLPLSPKGTVASDDVGARVIVPDTYQSNSRQAGLDDDRSGDRKPASDKGGLKMQIKSDGTELVEKSQHTFTTETPRPNAAIETVEKSSIKDSSQILTDARAGGYEGL
Ga0138361_1182310	Ga0138361_11823101	F020602	MGIKYISGFRGLDHAKQHLRRSVHLGSALTSGYTVLNPAEAFDQQACFVYLNGALLKEGTSGAGGDYVLSGTNTVTFNTAVATTDAIEVISYAFQNPTLPQTMVEVDHTVTSANASYHSTAFTG
Ga0138361_1186617	Ga0138361_11866171	F062832	LPAAPAGTTGSDNDVGADITVPAQPYPQGDQAGLDDDRQNDNAPAGDSAPSMQEKPLHKNETPRLVSKSQHTFTTETPRPGAAIEKAGQSQTDFSPILKDARAEGYEGLSQVARNILKGKYYTPTDEEVRGF*
Ga0138361_1188630	Ga0138361_11886301	F105006	MPMNRFVLLNANGVARSGFYLEIEQFPQGTTPGVAQYVDARGTNDVINFIYNSETDLLDAWHVKSPSNKFTMTPVLAGQRVVGLDVQFSHLPNFVAHFALDLSTDEEEVVYDVLSPPVHLEEFSAVSF*
Ga0138361_1191237	Ga0138361_11912371	F006551	CTVESASGTIGTNGVLTDDTLRAFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIPNPYGEALVQVDVNGIQTFRGTGVGIHVDSIYGIPFIPSKDAPSDSGDATEIGRLFAFDTSDAEGYGYPRIGIQIAIPTEYYEATRRSPAYPFVNNAFVEKGVFRTMGETVCRHFKSQG
Ga0138361_1191835	Ga0138361_11918351	F097512	TPRPNASIENVDKSIKDSSLILKDARAEGYEGLSQVARNILNGKYYVPSDDEVRGF*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300011321: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences