Metagenome / Metatranscriptome Family F059119

Basic Information
Family ID	F059119
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	51 residues
Representative Sequence	LLELIILVLTIYWLLSFFGQSIVPGFAHAGGFIDMLSVVIVVLIIVKFLS
Number of Associated Samples	108
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.47 %
% of genes near scaffold ends (potentially truncated)	41.79 %
% of genes from short scaffolds (< 2000 bps)	76.87 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (67.910 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.687 % of family members)
Environment Ontology (ENVO)	Unclassified (18.657 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (26.866 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.69% β-sheet: 0.00% Coil/Unstructured: 42.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04972	BON	31.34
PF12732	YtxH	23.13
PF04226	Transgly_assoc	4.48
PF01694	Rhomboid	4.48
PF02325	YGGT	2.99
PF00072	Response_reg	1.49
PF01594	AI-2E_transport	1.49
PF02589	LUD_dom	1.49
PF02397	Bac_transf	0.75
PF14721	AIF_C	0.75
PF05532	CsbD	0.75
PF00571	CBS	0.75
PF12698	ABC2_membrane_3	0.75
PF00702	Hydrolase	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	4.48
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	4.48
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	2.99
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.49
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.91 %
Unclassified	root	N/A	32.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.91 %
Unclassified	root	N/A	32.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.91 %
Unclassified	root	N/A	32.09 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.54 %
Unclassified	root	N/A	32.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	42.54 %
Unclassified	root	N/A	32.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	33.58 %
Unclassified	root	N/A	32.09 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.75 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.75 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	33.58 %
Unclassified	root	N/A	32.09 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.75 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.75 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	33.58 %
Unclassified	root	N/A	32.09 %
Oceanimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Oceanimonas	0.75 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.75 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	33.58 %
Unclassified	root	N/A	32.09 %
Oceanimonas doudoroffii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Oceanimonas → Oceanimonas doudoroffii	0.75 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_11141331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1410	Open in IMG/M
2228664021\|ICCgaii200_c0476257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300000228\|TB_PC08_66DRAFT_10182230	Not Available	537	Open in IMG/M
3300000233\|TB_FS06_10DRAFT_1042999	Not Available	1104	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11262279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1578	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11483539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3936	Open in IMG/M
3300000559\|F14TC_106782097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	741	Open in IMG/M
3300000787\|JGI11643J11755_11612649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300000787\|JGI11643J11755_11791852	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300002024\|MIS_1089436	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300002026\|MIS_10007163	All Organisms → cellular organisms → Bacteria	12083	Open in IMG/M
3300002026\|MIS_10014989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8174	Open in IMG/M
3300002124\|C687J26631_10014184	All Organisms → cellular organisms → Bacteria → Proteobacteria	2830	Open in IMG/M
3300003997\|Ga0055466_10079360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	864	Open in IMG/M
3300003999\|Ga0055469_10005141	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300004013\|Ga0055465_10178137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300004114\|Ga0062593_100338138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1308	Open in IMG/M
3300004157\|Ga0062590_101435906	Not Available	688	Open in IMG/M
3300004282\|Ga0066599_101110971	Not Available	584	Open in IMG/M
3300004282\|Ga0066599_101334440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Oceanimonas → Oceanimonas doudoroffii	543	Open in IMG/M
3300004643\|Ga0062591_100164824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1570	Open in IMG/M
3300004643\|Ga0062591_102031079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300004778\|Ga0062383_10195924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300004779\|Ga0062380_10246130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	739	Open in IMG/M
3300004780\|Ga0062378_10115549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300004782\|Ga0062382_10512597	Not Available	578	Open in IMG/M
3300005093\|Ga0062594_102082301	Not Available	609	Open in IMG/M
3300005289\|Ga0065704_10720962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300005293\|Ga0065715_10131036	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005294\|Ga0065705_10003262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9044	Open in IMG/M
3300005294\|Ga0065705_10376780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	894	Open in IMG/M
3300005295\|Ga0065707_10518336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	744	Open in IMG/M
3300005295\|Ga0065707_11058584	Not Available	525	Open in IMG/M
3300005343\|Ga0070687_101323924	Not Available	536	Open in IMG/M
3300005471\|Ga0070698_100619298	Not Available	1023	Open in IMG/M
3300005518\|Ga0070699_100008006	All Organisms → cellular organisms → Bacteria	9176	Open in IMG/M
3300005518\|Ga0070699_100775233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	877	Open in IMG/M
3300005827\|Ga0074478_1276786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	1856	Open in IMG/M
3300005829\|Ga0074479_10905305	All Organisms → cellular organisms → Bacteria	39119	Open in IMG/M
3300005833\|Ga0074472_11016877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2565	Open in IMG/M
3300006194\|Ga0075427_10105255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300006224\|Ga0079037_101252426	Not Available	738	Open in IMG/M
3300006844\|Ga0075428_100129335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2748	Open in IMG/M
3300006844\|Ga0075428_100931695	Not Available	921	Open in IMG/M
3300006845\|Ga0075421_101251034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	825	Open in IMG/M
3300006846\|Ga0075430_101127594	Not Available	646	Open in IMG/M
3300006847\|Ga0075431_101035399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	787	Open in IMG/M
3300006847\|Ga0075431_101386725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	663	Open in IMG/M
3300006852\|Ga0075433_11142663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300006853\|Ga0075420_100652112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300006865\|Ga0073934_10115576	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300006876\|Ga0079217_11013209	Not Available	609	Open in IMG/M
3300006880\|Ga0075429_100335776	Not Available	1323	Open in IMG/M
3300006880\|Ga0075429_100617541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300006894\|Ga0079215_10970549	Not Available	620	Open in IMG/M
3300006954\|Ga0079219_10245928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1059	Open in IMG/M
3300006954\|Ga0079219_12112211	Not Available	539	Open in IMG/M
3300006969\|Ga0075419_10162636	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300007004\|Ga0079218_10045844	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300007004\|Ga0079218_11767984	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009009\|Ga0105105_10095404	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300009009\|Ga0105105_10152827	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300009009\|Ga0105105_10256206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300009009\|Ga0105105_11011622	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009100\|Ga0075418_11644392	Not Available	698	Open in IMG/M
3300009100\|Ga0075418_13055686	Not Available	510	Open in IMG/M
3300009131\|Ga0115027_11713430	Not Available	523	Open in IMG/M
3300009157\|Ga0105092_10268958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	959	Open in IMG/M
3300009162\|Ga0075423_10185706	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300009165\|Ga0105102_10385874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	742	Open in IMG/M
3300009166\|Ga0105100_10937535	Not Available	541	Open in IMG/M
3300009168\|Ga0105104_10173516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1169	Open in IMG/M
3300009171\|Ga0105101_10004827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6209	Open in IMG/M
3300010040\|Ga0126308_10960595	Not Available	597	Open in IMG/M
3300010138\|Ga0115595_1192514	Not Available	516	Open in IMG/M
3300010357\|Ga0116249_11222068	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010399\|Ga0134127_10208316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1823	Open in IMG/M
3300010399\|Ga0134127_10381955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1387	Open in IMG/M
3300010399\|Ga0134127_10716460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1042	Open in IMG/M
3300010403\|Ga0134123_10033795	All Organisms → cellular organisms → Bacteria	3745	Open in IMG/M
3300011419\|Ga0137446_1072126	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300012174\|Ga0137338_1077479	Not Available	721	Open in IMG/M
3300015079\|Ga0167657_1013154	Not Available	1125	Open in IMG/M
3300015372\|Ga0132256_101599042	Not Available	762	Open in IMG/M
3300018031\|Ga0184634_10505044	Not Available	539	Open in IMG/M
3300018051\|Ga0184620_10170363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300018059\|Ga0184615_10234118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1030	Open in IMG/M
3300020003\|Ga0193739_1136501	Not Available	598	Open in IMG/M
3300020048\|Ga0207193_1013034	All Organisms → cellular organisms → Bacteria	11305	Open in IMG/M
3300020048\|Ga0207193_1054477	All Organisms → cellular organisms → Bacteria	4127	Open in IMG/M
3300020067\|Ga0180109_1388208	Not Available	682	Open in IMG/M
3300021090\|Ga0210377_10134499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1626	Open in IMG/M
3300021090\|Ga0210377_10174040	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300021445\|Ga0182009_10741019	Not Available	534	Open in IMG/M
3300022185\|Ga0079039_1158781	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300022185\|Ga0079039_1331924	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300024056\|Ga0124853_1370425	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300025310\|Ga0209172_10031796	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300025313\|Ga0209431_10317317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1216	Open in IMG/M
3300025318\|Ga0209519_10415878	Not Available	766	Open in IMG/M
3300025326\|Ga0209342_10959707	Not Available	656	Open in IMG/M
3300025327\|Ga0209751_10292596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1374	Open in IMG/M
3300025918\|Ga0207662_10206500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1274	Open in IMG/M
3300025936\|Ga0207670_10350146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1169	Open in IMG/M
3300025942\|Ga0207689_10716470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	844	Open in IMG/M
3300027543\|Ga0209999_1071150	Not Available	667	Open in IMG/M
3300027723\|Ga0209703_1311821	Not Available	556	Open in IMG/M
3300027743\|Ga0209593_10090184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1136	Open in IMG/M
3300027762\|Ga0209288_10300701	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300027775\|Ga0209177_10326741	Not Available	593	Open in IMG/M
3300027792\|Ga0209287_10171119	Not Available	826	Open in IMG/M
3300027880\|Ga0209481_10064104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1725	Open in IMG/M
3300027880\|Ga0209481_10439334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300027886\|Ga0209486_10032627	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300027952\|Ga0209889_1095780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300028649\|Ga0302162_10005424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2879	Open in IMG/M
3300030571\|Ga0247652_1134661	Not Available	583	Open in IMG/M
3300030987\|Ga0308155_1006952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	846	Open in IMG/M
3300031228\|Ga0299914_10019773	All Organisms → cellular organisms → Bacteria	5432	Open in IMG/M
3300032002\|Ga0307416_101697701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	736	Open in IMG/M
3300032005\|Ga0307411_11530478	Not Available	614	Open in IMG/M
3300032173\|Ga0315268_10008728	All Organisms → cellular organisms → Bacteria	10556	Open in IMG/M
3300032173\|Ga0315268_10513031	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300032173\|Ga0315268_11872400	Not Available	613	Open in IMG/M
3300032420\|Ga0335397_10002441	All Organisms → cellular organisms → Bacteria	25322	Open in IMG/M
3300033420\|Ga0316608_1011603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2840	Open in IMG/M
3300033482\|Ga0316627_100621551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	988	Open in IMG/M
3300033482\|Ga0316627_101509666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	680	Open in IMG/M
3300033485\|Ga0316626_10811740	Not Available	821	Open in IMG/M
3300033487\|Ga0316630_11625193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300033489\|Ga0299912_11120526	Not Available	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.85%
Host-Associated	Host-Associated	19.40%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	40.30%
Aquatic	Environmental → Aquatic	39.55%
Plants	Host-Associated → Plants	19.40%
Wastewater	Engineered → Wastewater	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.81%
Freshwater	Environmental → Aquatic → Freshwater	29.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.93%
Sediment	Environmental → Aquatic → Sediment	5.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.48%
Marine	Environmental → Aquatic → Marine	2.24%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.49%
Peat	Environmental → Terrestrial → Peat	1.49%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.18%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.43%
Loam	Environmental → Terrestrial → Soil → Loam	8.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.97%
Lake	Environmental → Aquatic → Freshwater → Lake	4.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.24%
Pond	Environmental → Aquatic → Freshwater → Pond	1.49%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.49%
Ice	Environmental → Aquatic → Freshwater → Ice	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.99%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.99%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.24%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	1.49%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.49%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.49%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.49%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.73%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.99%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.24%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.24%
Sinkhole Freshwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater	2.24%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.24%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.24%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.24%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.49%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.49%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	1.49%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.49%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.49%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.49%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.49%
Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Sediment → Microbial Mat	0.75%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000228	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- PC08_66	Environmental	Open in IMG/M
3300000233	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- FS06_10	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002024	Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 1k-1.5k	Environmental	Open in IMG/M
3300002026	Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 5k+	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010138	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300030571	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300033420	Microbial mat bacterial communities from Middle Island sinkhole, Lake Huron, Michigan, United States - MIS.2016.152B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0954.00005800	2162886012	Miscanthus Rhizosphere	LLALIILAVAMYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFLMY
ICCgaii200_04762572	2228664021	Soil	LVLTVYWLLSFFGKSIVPGISHTAGFIDMLAGVIVVLIIMKFLS
TB_PC08_66DRAFT_101822302	3300000228	Groundwater	MLALIILLLTMQWLLSLFGQSTFPGVPHTGGFIYMLSVLIVVLIITRFLTYGI*
TB_FS06_10DRAFT_10429993	3300000233	Groundwater	MLELIILALTAQLLFSFFGQTIFPRVPHTGGFIYMLSIAIVSLIILKFLMWS*
ICChiseqgaiiFebDRAFT_112622793	3300000363	Soil	GGVRTPDEKISVLALIILALTAYWLLSFFGQSIVPCIPHTGGFIYLLAVVIVLLIIIKFLWQV*
ICChiseqgaiiFebDRAFT_114835392	3300000363	Soil	LLQVIILVLTGYWLFSFFGKSIVPGISHPSGFVDVLSVIILILIIIKFLSW*
F14TC_1067820972	3300000559	Soil	KVSLLELIILILSVYWLLSFFGQSIIPGIPHTGGFIYMLAIVIVILLIMKFLSQV*
JGI11643J11755_116126492	3300000787	Soil	TPDEKISVLALIILALTAYWLLSFFGQSIVPCIPHTGGFIYLLAVVIVLLIIIKFLWQV*
JGI11643J11755_117918522	3300000787	Soil	LLQVIILVLTGYWLFSFFGKSIVPGISHPSGFVDVLSVIILILIIXKFLSX*
MIS_10894363	3300002024	Sinkhole Freshwater	MLELIILLLTMQWLLSFFGQSIFPGVPHTGSFIYILSVLIVVLIITKFLTYGI*
MIS_1000716310	3300002026	Sinkhole Freshwater	MLEFIILVLTAQLLLSFFGQSIFPGVPHTGSFIYILSVLIVVLIMMKFLMLSM*
MIS_100149898	3300002026	Sinkhole Freshwater	MFELIILVLTAQLLLSFFGQSAFPGVPHTGSFIYILSVLIVLLIIMKFLTDGI*
C687J26631_100141848	3300002124	Soil	LLELIILVLTMHWLLSFFGQSIVPGLPHTAGFIDLLSVVIVVLIIISFWS*
Ga0055466_100793602	3300003997	Natural And Restored Wetlands	LLEVIILIATMYWLLSFFGQSIVPGIPHTGGFIDMLSVVIVVLIIIHFVS*
Ga0055469_100051414	3300003999	Natural And Restored Wetlands	LLALILMLAIYWLLSFFGQSIVRCVSHTSGFIDMLSVIIVLLIIIRFLA*
Ga0055465_101781372	3300004013	Natural And Restored Wetlands	MLAIYWLLSFFGQSIVRCVSHTSGFIDMLSVIIVLLIIIRFLA*
Ga0062593_1003381382	3300004114	Soil	ELIILILTAQWLFSFFGQSIVPGIPHTGGFIYLLAVVIVVLIIIRFLS*
Ga0062590_1014359061	3300004157	Soil	LLELIILILTAQWLFSFFGQSIVPGIPHTGGFIYLLAVVIVVLIIIRFLS
Ga0066599_1011109711	3300004282	Freshwater	MFELIILVLTAQLLLSFFGQSIFPGVPHTGSFIYMLSVLIVVLIITKFLTYGI*
Ga0066599_1013344401	3300004282	Freshwater	LFVLIILLLTTQLALSYFGQSVFPGISHTGGFIYLLSVLIVALIIMKFLSQL*
Ga0062591_1001648242	3300004643	Soil	LLELIILILTAQWLFSFFGQSIVPGIPHTGGFIYLLAVVIVVLIIIRFLS*
Ga0062591_1020310791	3300004643	Soil	KKFSLLGLIILALTAYWLLGFFGQSIVPGVQHTSSFIDFLCVVIVLLIIVKFLT*
Ga0062383_101959241	3300004778	Wetland Sediment	RSIQKKKRNPVLKLIILVLTAQWLLSFFGQSFFPGIPHTGGFLYMLSVVIVAMIAMIFLS
Ga0062380_102461302	3300004779	Wetland Sediment	VLKLIILVLTAQWLLSFFGQSFFPGIPHTGGFLYMLSVVIVAMIAMIFLS*
Ga0062378_101155491	3300004780	Wetland Sediment	ARSIQKKKRNPVLKLIILVLTAQWLLSFFGQSFFPGIPHTGGFLYMLSVVIVAMIAVIFLS*
Ga0062382_105125971	3300004782	Wetland Sediment	LLVLIILVLTVHWLLSFFGQSIFPGVPHTGGFIDMLSLVIVVLIIVRFLS*
Ga0062594_1020823012	3300005093	Soil	LLALIILALAIYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFLMY*
Ga0065704_107209622	3300005289	Switchgrass Rhizosphere	IRPKIWPDGVSIPDKRICLMELIILGLTLHWLLSFFGQSTVPRIVHTSRFIDMLSVVIVVLIIIKFLS*
Ga0065715_101310364	3300005293	Miscanthus Rhizosphere	LLALIILAVAMYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFLMY*
Ga0065705_1000326217	3300005294	Switchgrass Rhizosphere	LLQLIILVLTVHWLLSFFGQAIVPGKFHKGYFTDVLSVVILVLIIIRFLSFIHYQ*
Ga0065705_103767802	3300005294	Switchgrass Rhizosphere	VSIPDKRICLMELIILGLTLHWLLSFFGQSTVPRIVHTSRFIDMLSVVIVVLIIIKFLS*
Ga0065707_105183362	3300005295	Switchgrass Rhizosphere	VLTIYWLLSFFGQSIVPGIPHTGSFIYMLAVLIVVLIIIKFLSQV*
Ga0065707_110585842	3300005295	Switchgrass Rhizosphere	LLELFILVLTVQWLLGFFGQSIFPQILHMGGFIDILAIIIVVLIGVQFLSWL*
Ga0070687_1013239242	3300005343	Switchgrass Rhizosphere	LLALIILALAMYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFLMY*
Ga0070698_1006192983	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LLALIILALAMYWVLSFFGQSIVPGVPHTAHFVDLLAVLIVVLIIVKFLLY*
Ga0070699_10000800612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LLELIILILSVYWLLSFFGQSIIPGIPHTGGFIYMLAIVIVILLIMKFLSQV*
Ga0070699_1007752331	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LLGLIILALTAYWLLGFFGQSIVPGVQHTSSFIDFLCVVIVLLIIVKFLT*
Ga0070695_1008622711	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LLALIILTLAIYWVLSFFGRSIVPDVPHTARFIDLLAVVI
Ga0068864_1005995021	3300005618	Switchgrass Rhizosphere	VLELIILALTGYWLLSFFGRSVIPGVPHTARFIDLLAVVIV
Ga0074478_12767863	3300005827	Sediment (Intertidal)	MFELIILVLSAQLLLSFFGQSIFPGVPHTGGFIYMLSVLIVVLIITKFLVYGI*
Ga0074479_1090530512	3300005829	Sediment (Intertidal)	LFELIILVLTVQWLLSFFGQKTFPRIPHSGTFIYLLSVLIVGLIITKFLIWL*
Ga0074472_110168771	3300005833	Sediment (Intertidal)	IILVLTVHWLFSFFGQSIFPGVPHTAGFIDMLSLVIVVLIIVGVLS*
Ga0075427_101052551	3300006194	Populus Rhizosphere	FGCGGVRTPDEKIFVLALIILALTAYWLLSFFGQSIVPCIPHTGGFIYMLAVVIVLLIIIKFLWQV*
Ga0079037_1012524262	3300006224	Freshwater Wetlands	VLELIILVLTVQWLLSFFGQSIVPGILHTGGFIYMLSVLIVVLMIVRFLS*
Ga0075428_1001293354	3300006844	Populus Rhizosphere	LLYLIILVLTVYWLLSFFGKSIVPGIPPTAGFIDMLSAVIVALIIMKFLSQ*
Ga0075428_1009316953	3300006844	Populus Rhizosphere	LFELIILVLTIYWLLSFFGQSIIPGLTHTGGFIDMLSFVIVVLIIIKFLS*
Ga0075421_1012510341	3300006845	Populus Rhizosphere	SLLELIILVLTVHWLFSFFGKSIVPGIPHSGGFIDMLSVVIVLLIIFRFLS*
Ga0075430_1011275942	3300006846	Populus Rhizosphere	LLTLILMLTIYWLLSFFGQSIVRGASHTSGFIDMLSIIIVALIIIRFLS*
Ga0075431_1010353991	3300006847	Populus Rhizosphere	LLELIIRVLTIYWLLSFFGQSIVPGFAHAGGFIDMLSVVIVVLIIVKFLS*
Ga0075431_1013867252	3300006847	Populus Rhizosphere	MVLTVYWLLSFFGQSTFPGIPHSGGFIDMLSVLIVLLSIIRYL
Ga0075433_111426632	3300006852	Populus Rhizosphere	LLALTILALVIYWVLSFFGQSIIPGVAHTTRFIDLLAVIIILLIIVKFLSY*
Ga0075420_1006521122	3300006853	Populus Rhizosphere	LLELIILVLTIYWLLSFFGQSIVPGFAHAGGFIDMLSVVIVVLIIVKFLS*
Ga0073934_101155764	3300006865	Hot Spring Sediment	LFELIILLLTVYWFLSFFGRSMIPNITHTGGFIDMLSIAIVVLIIIRFLS*
Ga0079217_110132091	3300006876	Agricultural Soil	LFVELIILVLTIYWVLSFFGQSIVHGIPHMGGFIDMLSVVIVALIIIRFLS*
Ga0075429_1003357764	3300006880	Populus Rhizosphere	LLELIILILTIYWLLSFFGQSIVPGFAHAGGFIDMLSVVIVVLIIVKFLS*
Ga0075429_1006175411	3300006880	Populus Rhizosphere	ILVLTVYWLLSFFGKSIVPGISHTAGFIDMLAGVIVVLIIMKFLS*
Ga0079215_109705492	3300006894	Agricultural Soil	LLQLIILVLAGYWLLSFFGQSIVPGMRQTGSFIDVLAVVIVALIIIRFLS*
Ga0079219_102459282	3300006954	Agricultural Soil	LLALIILALAMYWVLSFFGQSIVPGVPHTARSIDLLAVLIVVLILVKFLLY*
Ga0079219_121122112	3300006954	Agricultural Soil	VLKVIILLLIGQWLLSFFGQRIAPGIPHSGGFIYLLSLVIVILIAMSFLL*
Ga0075419_101626362	3300006969	Populus Rhizosphere	LLQVIILVLTGYWLFSFFGKSIVPGISHTSGFVDVLSVIILILIIIKFLSW*
Ga0079218_100458443	3300007004	Agricultural Soil	LLDLIILVLTVYWLLSFFGQSIIPGIPHTGGFIDMLSVMIVFLIIIRFLS*
Ga0079218_117679842	3300007004	Agricultural Soil	MILVLTVYWLLSFFGKSIVSGIQHTEGFINLLSVLIVVLIMFRFLA*
Ga0105105_100954042	3300009009	Freshwater Sediment	VLELLILALTAQLLFSFFGQTIFPGVPHTGSFIYLLSVLIVVLIIMKFVS*
Ga0105105_101528271	3300009009	Freshwater Sediment	MLALIILLLTTQWLLSLFGQTIFPGVPHTGSFIYILSVLIVVLI
Ga0105105_102562061	3300009009	Freshwater Sediment	MLELIVLVLTMQWLLSFFGQSIFPGLPHTGGFIYMLSVLIVVLIMMKFVS*
Ga0105105_110116222	3300009009	Freshwater Sediment	LIILALTAQLLFSFFGQTVFPGVPHTGGFIYMLSVLIVVLIIMKFLVEFL*
Ga0075418_116443921	3300009100	Populus Rhizosphere	VLELIILALTGYWSLSFFGQSIVPSIPHTGGFIDMLAVVIVVLIIIKFLSHV*
Ga0075418_130556861	3300009100	Populus Rhizosphere	LLELIILALTLYWLLSFFGQSIVRGISPTGGFIDMLSVVIVVLILVKFLS*
Ga0115027_117134302	3300009131	Wetland	LTMQWLLSFFGQSVFPGVPHTGGFIYMLSVLIVALIIVRFLS*
Ga0105092_102689582	3300009157	Freshwater Sediment	LFELIILLLTVYWLLSFFGHSIIPSLAHTGGFIDMLSVVIVVLIIMKFLS*
Ga0075423_101857062	3300009162	Populus Rhizosphere	LLALIILAVAMYWVLSFFGQSIIPGVAHTTRFIDLLAVIIILLIIVKFLSY*
Ga0105102_103858741	3300009165	Freshwater Sediment	LLELIILVLTAQLLFSFFGQSTFPGVPHTGGFIYILSVLIVV
Ga0105100_109375351	3300009166	Freshwater Sediment	LLELIILILTVYWLLSFFGQSVVSIPHTGDFLYMLSVVIV
Ga0105104_101735162	3300009168	Freshwater Sediment	MSTQKKIPLLELIVLVLTVYWLLSLFGRSIISGIPHTGGFIDMLSVIIVVLIIVKFLS*
Ga0105101_1000482711	3300009171	Freshwater Sediment	LLELIILILTVYWLLSFFGQSVVSIPHTGDFLYMLSVVIVVLIIMKFLS*
Ga0126308_109605952	3300010040	Serpentine Soil	LLELIILVLTLYWLLSFFGRSIFPGIPHTARFIDLLAVVIVILIIMKFLSYESSQTF
Ga0115595_11925142	3300010138	Wetland	LLLSIILLLTAQWLFSLFGQSNFPSVLHTGGFIYMLSAFIVVLIIMKFL
Ga0116249_112220683	3300010357	Anaerobic Digestor Sludge	VSEFIILALTTQWLFSFFGQLIFPGIPHTGSFIYMLA
Ga0134127_102083161	3300010399	Terrestrial Soil	LLALIILALTAHWLLSFFGQSIVPGISQTGGFIDMLSVIIVVLIIVKFLS*
Ga0134127_103819551	3300010399	Terrestrial Soil	RKVRLLELIILVLTLYWLLSFFGRSIVRGISPTGGFIDLLSVVIVVLILMKFLS*
Ga0134127_107164602	3300010399	Terrestrial Soil	ILVLTVQWLFSFFGQSFVPRVLHAGGFIDVLTVVIVLLIIMQFLS*
Ga0134123_100337952	3300010403	Terrestrial Soil	MISFLEFIILVLTVQWLFSFFGQSFVPRVLHAGGFIDVLTVVIVLLIIMQFLS*
Ga0137446_10721262	3300011419	Soil	MLELIILALTAQWLFSFFGQSIFPGVPHSGGFIYMLSALIVVLIIINSLT*
Ga0137338_10774791	3300012174	Soil	LLELISLVLTVHWLLSFFGQSIVPGIPHADGFIDILSVVIVLLIMVTFLS
Ga0167657_10131541	3300015079	Glacier Forefield Soil	MVSLFELIIMGLVTQSLLSFFGQSLLPGLPHSGAFIYLLSALIVVLIIMKTQVSL*
Ga0132256_1015990421	3300015372	Arabidopsis Rhizosphere	LLELIILALTIYWLLSFFGWSIVPGVPHTARFIDLLAIVIIGLIIVKFLLY*
Ga0184634_105050441	3300018031	Groundwater Sediment	LLELIILVLTVQWLLSFFGQSIVAGIPHTGAFIYMLSVLIVVLI
Ga0184620_101703632	3300018051	Groundwater Sediment	LIILALTAHWLLSFFGQSIVPGISHTGGFIDVLSVIIVVLIIVKFLS
Ga0184615_102341181	3300018059	Groundwater Sediment	VYCLLSFFGKSIVPGISHTAGFIDMLSGVIVVLIMMKFLS
Ga0193739_11365013	3300020003	Soil	MSAQKKIPLLELIILVLTVHWLLSYFGQSIVPGIPHTDGFIDMLSVVLVVMIIMKFLS
Ga0207193_101303410	3300020048	Freshwater Lake Sediment	MLEFIILVLTAQLLLSFFGQSIFPGVPHTGSFIYILSVLIVVLIMMKFLMLSM
Ga0207193_105447711	3300020048	Freshwater Lake Sediment	MLELIILLLTMQWLLSFFGQSTFPGVPHTGSFIYMLSVLIVVLIIMKFLVEFL
Ga0180109_13882082	3300020067	Groundwater Sediment	LELIILVLTIYWLLSFFGQSIVPGIPHTGRFIDMLSV
Ga0210377_101344991	3300021090	Groundwater Sediment	MLELIILVLTTQWLLSFFGQSIFPGIPHSGGFIYMLSVLIVVLIM
Ga0210377_101740403	3300021090	Groundwater Sediment	SLLVLIILLLTTQWLLSFFGQSIFPGVPHTGGFIYMLSALIVVLIIMKFLS
Ga0182009_107410192	3300021445	Soil	LLELIILALAMYWVLSFFGQSILPGVPHTARFVDLLAVVIVVLILVKFVMY
Ga0079039_11587816	3300022185	Freshwater Wetlands	LFELIILALTVQCLLSFFGQSTFPGIPHTDGFIYMLSALIVALIIMKFMSDLY
Ga0079039_13319241	3300022185	Freshwater Wetlands	MLELIILILIVQLLVSFFGQSIFPGVPHTGGFIYMLSIVIVGLIIIKFLSWL
Ga0124853_13704252	3300024056	Freshwater Wetlands	VNIYFLFHKEDPLLELIILVLTVQWLLSFFGRSLIPGIPHTGGFIYLLAVVIDSLIIVRFLT
Ga0209172_100317963	3300025310	Hot Spring Sediment	LLTVIILLLVGQWLLSFFGQSVTPGITHTGGFIYLLSLAIVVLIATSFLLLLGR
Ga0209431_103173172	3300025313	Soil	LLELIILVLTMHWLLSFFGQSIVPGLPHTAGFIDLLSVVIVVLIIISFWS
Ga0209519_104158783	3300025318	Soil	VLELIILVLTAQWLLSFFGQSIVPGIPHTGGFIYMLSVV
Ga0209342_109597073	3300025326	Soil	VLELIILVLTAQWLLSFFGQSIVPGIPHTGGFIYMLSVVIVVLIT
Ga0209751_102925963	3300025327	Soil	LLELIILVLTMHWLLSFFGQSIVPGIPHTAGFIDLLSVVIVVLIIISFWS
Ga0207662_102065002	3300025918	Switchgrass Rhizosphere	LLALIILALAMYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFLMY
Ga0207670_103501462	3300025936	Switchgrass Rhizosphere	LLALIILALAIYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFLMY
Ga0207689_107164704	3300025942	Miscanthus Rhizosphere	LLALIILALAMYWVLSFFGQSIVPGVPHTARFVDLLAVVIVVLILVKFL
Ga0209999_10711501	3300027543	Arabidopsis Thaliana Rhizosphere	LLELIIVVLTIHWLLSFFGQSTFPGIPHSDGFIDVLSVV
Ga0209703_13118213	3300027723	Freshwater Sediment	LLELIILVLTVYWLLGFFGQSVVQSVVSIPHTGDFLYMLSVVIVVLIIMKFLS
Ga0209593_100901842	3300027743	Freshwater Sediment	MSTQKKIPLLELIVLVLTVYWLLSLFGRSIISGIPHTGGFIDMLSVIIVVLIIVKFLS
Ga0209288_103007011	3300027762	Freshwater Sediment	KAPLLELIILALTAQLLFSFFGQTVFPGVPHTGGFIYMLSVLIVVLIIMKFLVEFL
Ga0209177_103267412	3300027775	Agricultural Soil	VLKVIILLLIGQWLLSFFGQRIAPGIPHSGGFIYLLSLVIVILIAMSFLL
Ga0209287_101711192	3300027792	Freshwater Sediment	LLELIILVLTAQLLFSFFGQSTFPGVPHTGGFIYILSVLIVALI
Ga0209481_100641042	3300027880	Populus Rhizosphere	LLYLIILVLTVYWLLSFFGKSIVPGIPPTAGFIDMLSAVIVALIIMKFLSQ
Ga0209481_104393342	3300027880	Populus Rhizosphere	LFELIILVLTIYWLLSFFGQSIVPGFAHAGGFIDMLSVVIVVLIIVKFLS
Ga0209486_100326273	3300027886	Agricultural Soil	LLDLIILVLTVYWLLSFFGQSIIPGIPHTGGFIDMLSVMIVFLIIIRFLS
Ga0209889_10957802	3300027952	Groundwater Sand	GASTPDKKASLLELIILVLTINWLLSFFGQSIVPGIPHTSYFIDMLSVVIVVLILIRFLS
Ga0302162_100054244	3300028649	Fen	IILLLTAQWLFSFFGQSILPGVPYTGSFIYMLSILIVILIIMKFLSQV
Ga0247652_11346611	3300030571	Soil	LLELIILVLTVHWLLSFFGQSTFPGIPHSGGFIDMLAVVIVLLILIR
Ga0308155_10069522	3300030987	Soil	RIIDKKISLLALIILALTAHWLLSFFGQSIVPGISHTGGFIDMLSVIIVVLIIVKFLS
Ga0299914_100197738	3300031228	Soil	LLELIILVLTIYWLRSFFGQSIVPGIRHTEGFIDMLSVVIVILIIMKFLA
Ga0302322_1003123781	3300031902	Fen	LIELIILLLTIQWLLSFFGQSIFPRILHSDAFIYILSVLIVGLIINRFLFWA
Ga0307416_1016977012	3300032002	Rhizosphere	SLFELTILVLTAYWCLYFFGQSMIPGMTHMAGFIDLLSIAIVALIIIKFLS
Ga0307411_115304781	3300032005	Rhizosphere	LLALILMLTTYWALSFFGQLVVGVSHTSGFIDVLSVIIVVLIIIRFLS
Ga0315268_100087286	3300032173	Sediment	LLELIILLLTLHWLLSYFGQSILPGMPHSGGFIYLLSIAIIVLIIMEFLSYL
Ga0315268_105130313	3300032173	Sediment	FNGRFSVLELIILALTMQWLISFFGQSTFPGVPHTGSFIYMLAVAIVSLIIIKFLSWTL
Ga0315268_118724001	3300032173	Sediment	IKEPPLLELIILLLTVHWLLSYFGQLVLPGLPHSGGFIYLLSIAIVVLIIMEFLSHL
Ga0335397_1000244116	3300032420	Freshwater	LLELIILALTVQWLLSFFGQSLFPGVPHTGGFIYMLSALIVLLIIVKFLSQV
Ga0316608_10116031	3300033420	Microbial Mat	MLELIILVLTAQLLLSFFGQFAFPGVPHTAGFIYILS
Ga0316627_1006215511	3300033482	Soil	PGDNCILHEKVPLLELIILVLTAQLLFSFFGQSAFPGVPHTGGFIYMLSVLIVLLIIMKFVS
Ga0316627_1015096661	3300033482	Soil	LLELIILVLTAQLLFSFFGQSAFPGVPHTGGFIYML
Ga0316626_108117401	3300033485	Soil	LLELIILVLTVQWLLSFFGQSIVPGILHTGGFIYMLSVLIVVLMIVRFLS
Ga0316630_116251931	3300033487	Soil	KLIQRKVSLLELIILILIAQWLLSFFGQSILPGILHTGGFIYMLSVIIVVLIFMKFLSQS
Ga0299912_111205262	3300033489	Soil	VFELILLVLIVQLLFSFFGQSIFPGIPHTGGFIYMLSVAI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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