NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F046098

Metagenome / Metatranscriptome Family F046098

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F046098
Family Type Metagenome / Metatranscriptome
Number of Sequences 152
Average Sequence Length 51 residues
Representative Sequence MRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTR
Number of Associated Samples 96
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 70.39 %
% of genes near scaffold ends (potentially truncated) 25.66 %
% of genes from short scaffolds (< 2000 bps) 76.32 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (57.895 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater
(10.526 % of family members)
Environment Ontology (ENVO) Unclassified
(19.737 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(29.605 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 52.50%    β-sheet: 0.00%    Coil/Unstructured: 47.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 152 Family Scaffolds
PF04191PEMT 1.97
PF00196GerE 1.32
PF13180PDZ_2 1.32
PF00872Transposase_mut 1.32
PF13614AAA_31 1.32
PF01381HTH_3 1.32
PF13487HD_5 1.32
PF04365BrnT_toxin 0.66
PF13200DUF4015 0.66
PF04055Radical_SAM 0.66
PF16326ABC_tran_CTD 0.66
PF05683Fumerase_C 0.66
PF00127Copper-bind 0.66
PF12732YtxH 0.66
PF06541ABC_trans_CmpB 0.66
PF01656CbiA 0.66
PF12796Ank_2 0.66
PF00535Glycos_transf_2 0.66
PF07751Abi_2 0.66
PF01609DDE_Tnp_1 0.66
PF00117GATase 0.66
PF01566Nramp 0.66
PF00208ELFV_dehydrog 0.66
PF16916ZT_dimer 0.66
PF12724Flavodoxin_5 0.66
PF07995GSDH 0.66
PF07043DUF1328 0.66
PF03631Virul_fac_BrkB 0.66
PF07521RMMBL 0.66
PF07478Dala_Dala_lig_C 0.66
PF00480ROK 0.66
PF01610DDE_Tnp_ISL3 0.66
PF13649Methyltransf_25 0.66
PF02687FtsX 0.66
PF07883Cupin_2 0.66
PF08378NERD 0.66
PF01206TusA 0.66
PF001982-oxoacid_dh 0.66
PF12698ABC2_membrane_3 0.66
PF03358FMN_red 0.66
PF00702Hydrolase 0.66
PF13732DUF4162 0.66
PF00226DnaJ 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 152 Family Scaffolds
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.32
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 1.32
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 0.66
COG0425Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.66
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 0.66
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.66
COG1838Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domainEnergy production and conversion [C] 0.66
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 0.66
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.66
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 0.66
COG2929Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin systemDefense mechanisms [V] 0.66
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.66
COG3293TransposaseMobilome: prophages, transposons [X] 0.66
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.66
COG3464TransposaseMobilome: prophages, transposons [X] 0.66
COG4823Abortive infection bacteriophage resistance proteinDefense mechanisms [V] 0.66
COG4905Uncharacterized membrane proteinFunction unknown [S] 0.66
COG5421TransposaseMobilome: prophages, transposons [X] 0.66
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.66
COG5487Uncharacterized membrane protein YtjA, UPF0391 familyFunction unknown [S] 0.66
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.66

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.89 %
All OrganismsrootAll Organisms42.11 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908028|beta3_all_NODE_69029_len_9976_cov_12_947575All Organisms → cellular organisms → Bacteria10026Open in IMG/M
2140918025|NODE_182535_length_1650_cov_16.822424Not Available1700Open in IMG/M
3300000362|SL_1KL_011_SEDDRAFT_10001648All Organisms → cellular organisms → Bacteria14718Open in IMG/M
3300000362|SL_1KL_011_SEDDRAFT_10179046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27688Open in IMG/M
3300000365|SL_9KL_010_SEDDRAFT_10149380Not Available744Open in IMG/M
3300001213|JGIcombinedJ13530_102871177Not Available1086Open in IMG/M
3300001335|ML8_10000122All Organisms → cellular organisms → Bacteria73548Open in IMG/M
3300001335|ML8_10000447All Organisms → cellular organisms → Bacteria61218Open in IMG/M
3300001335|ML8_10003691All Organisms → cellular organisms → Bacteria → Terrabacteria group13061Open in IMG/M
3300001335|ML8_10006094All Organisms → cellular organisms → Bacteria7311Open in IMG/M
3300001335|ML8_10011259All Organisms → cellular organisms → Bacteria4731Open in IMG/M
3300001335|ML8_10039943All Organisms → cellular organisms → Bacteria2410Open in IMG/M
3300001335|ML8_10087720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271029Open in IMG/M
3300001335|ML8_10101815Not Available918Open in IMG/M
3300001335|ML8_10108734Not Available873Open in IMG/M
3300001533|MLSed_10218297Not Available735Open in IMG/M
3300001533|MLSed_10263271Not Available636Open in IMG/M
3300001682|SAHD_10002187All Organisms → cellular organisms → Bacteria59330Open in IMG/M
3300002220|MLSBCLC_10581073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27693Open in IMG/M
3300002538|JGI24132J36420_10189829Not Available508Open in IMG/M
3300003830|Ga0051980_10310164Not Available741Open in IMG/M
3300004008|Ga0055446_10033183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271185Open in IMG/M
3300004212|Ga0066631_10193162All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300004238|Ga0066635_10247870All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300004239|Ga0066650_10125036Not Available1329Open in IMG/M
3300004239|Ga0066650_10230135Not Available929Open in IMG/M
3300004481|Ga0069718_15225448All Organisms → cellular organisms → Bacteria2618Open in IMG/M
3300005235|Ga0066637_10180501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27909Open in IMG/M
3300005235|Ga0066637_10226780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27765Open in IMG/M
3300005235|Ga0066637_10367010Not Available529Open in IMG/M
3300005236|Ga0066636_10064844All Organisms → cellular organisms → Bacteria1951Open in IMG/M
3300005936|Ga0075124_10005801Not Available5581Open in IMG/M
3300005939|Ga0075123_10244396Not Available666Open in IMG/M
3300005980|Ga0066798_10059094Not Available1187Open in IMG/M
3300006640|Ga0075527_10207094Not Available565Open in IMG/M
3300006792|Ga0075530_1024174All Organisms → cellular organisms → Bacteria2283Open in IMG/M
3300006950|Ga0075524_10032273Not Available2115Open in IMG/M
3300006950|Ga0075524_10118586Not Available1138Open in IMG/M
3300006950|Ga0075524_10290129Not Available717Open in IMG/M
3300006972|Ga0075518_1083379All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300008470|Ga0115371_10074095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5516Open in IMG/M
3300008470|Ga0115371_10407108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27866Open in IMG/M
3300008470|Ga0115371_10717842Not Available673Open in IMG/M
3300009009|Ga0105105_10036385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2160Open in IMG/M
3300009037|Ga0105093_10409894Not Available741Open in IMG/M
3300009053|Ga0105095_10064390Not Available1973Open in IMG/M
3300009053|Ga0105095_10760413Not Available542Open in IMG/M
3300009082|Ga0105099_10251885Not Available1024Open in IMG/M
3300009111|Ga0115026_10789117Not Available741Open in IMG/M
3300009149|Ga0114918_10274472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27951Open in IMG/M
3300009149|Ga0114918_10567296Not Available602Open in IMG/M
3300009149|Ga0114918_10751497Not Available509Open in IMG/M
3300009165|Ga0105102_10347870Not Available778Open in IMG/M
3300009166|Ga0105100_10639144Not Available654Open in IMG/M
3300009308|Ga0116593_1040012Not Available1035Open in IMG/M
3300011118|Ga0114922_10048412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3720Open in IMG/M
3300011118|Ga0114922_10070033Not Available3031Open in IMG/M
3300011118|Ga0114922_10382967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271168Open in IMG/M
3300012964|Ga0153916_10830175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271004Open in IMG/M
3300014494|Ga0182017_10012531All Organisms → cellular organisms → Bacteria5971Open in IMG/M
3300014502|Ga0182021_10012564All Organisms → cellular organisms → Bacteria10062Open in IMG/M
3300015370|Ga0180009_10211104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27868Open in IMG/M
3300015370|Ga0180009_10299536Not Available671Open in IMG/M
3300015370|Ga0180009_10352614Not Available596Open in IMG/M
3300015370|Ga0180009_10353055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27596Open in IMG/M
3300017941|Ga0187850_10520550Not Available513Open in IMG/M
3300018018|Ga0187886_1197979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_9776Open in IMG/M
3300018018|Ga0187886_1311730Not Available585Open in IMG/M
3300018068|Ga0184636_1024074Not Available1888Open in IMG/M
3300018068|Ga0184636_1047254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales1403Open in IMG/M
3300018070|Ga0184631_10002862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes4760Open in IMG/M
3300018070|Ga0184631_10054232Not Available1474Open in IMG/M
3300018070|Ga0184631_10079490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271250Open in IMG/M
3300020163|Ga0194039_1149143Not Available808Open in IMG/M
3300022185|Ga0079039_1522433Not Available634Open in IMG/M
3300022593|Ga0236338_1131662Not Available513Open in IMG/M
3300024262|Ga0210003_1005472Not Available9740Open in IMG/M
3300024262|Ga0210003_1037832All Organisms → cellular organisms → Bacteria2602Open in IMG/M
3300025021|Ga0210017_1211961Not Available602Open in IMG/M
3300025146|Ga0209322_10000684All Organisms → cellular organisms → Bacteria19986Open in IMG/M
3300025164|Ga0209521_10136124Not Available1536Open in IMG/M
3300025174|Ga0209324_10670810Not Available598Open in IMG/M
3300025721|Ga0209587_1047774All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300025721|Ga0209587_1201425Not Available523Open in IMG/M
3300025836|Ga0209748_1217500Not Available648Open in IMG/M
3300025868|Ga0210051_1112466Not Available1465Open in IMG/M
3300025868|Ga0210051_1354429Not Available572Open in IMG/M
3300025891|Ga0209585_10054847Not Available1474Open in IMG/M
3300027726|Ga0209285_10171893Not Available675Open in IMG/M
3300027740|Ga0214474_1018813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2719Open in IMG/M
3300027792|Ga0209287_10144574Not Available900Open in IMG/M
3300027811|Ga0256868_10082135All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300027811|Ga0256868_10424106Not Available533Open in IMG/M
3300027885|Ga0209450_10000966All Organisms → cellular organisms → Bacteria14502Open in IMG/M
3300027885|Ga0209450_10834172Not Available663Open in IMG/M
3300027958|Ga0209749_1087004Not Available938Open in IMG/M
3300028028|Ga0265292_1114243Not Available720Open in IMG/M
3300028156|Ga0268281_1058027Not Available944Open in IMG/M
3300028156|Ga0268281_1117584Not Available597Open in IMG/M
3300028168|Ga0268277_1040306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271363Open in IMG/M
3300028191|Ga0265595_1090797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271008Open in IMG/M
3300028193|Ga0265594_1215569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27604Open in IMG/M
3300028664|Ga0302164_10181931Not Available575Open in IMG/M
(restricted) 3300029268|Ga0247842_10122250All Organisms → cellular organisms → Bacteria1553Open in IMG/M
(restricted) 3300029286|Ga0247841_10106886All Organisms → cellular organisms → Bacteria2286Open in IMG/M
(restricted) 3300029286|Ga0247841_10448249Not Available837Open in IMG/M
(restricted) 3300029286|Ga0247841_10663676Not Available636Open in IMG/M
3300030613|Ga0299915_10565225Not Available737Open in IMG/M
3300030613|Ga0299915_10993796Not Available510Open in IMG/M
3300031255|Ga0315554_1011798All Organisms → cellular organisms → Bacteria4219Open in IMG/M
3300031255|Ga0315554_1011829All Organisms → cellular organisms → Bacteria4210Open in IMG/M
3300031255|Ga0315554_1060747Not Available1494Open in IMG/M
3300031255|Ga0315554_1096917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_271094Open in IMG/M
3300031274|Ga0307442_1186123Not Available575Open in IMG/M
3300031275|Ga0307437_1220831Not Available500Open in IMG/M
3300031281|Ga0307420_1043911All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon1647Open in IMG/M
3300031539|Ga0307380_10061891All Organisms → cellular organisms → Bacteria4040Open in IMG/M
3300031539|Ga0307380_10138289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2440Open in IMG/M
3300031539|Ga0307380_10438450All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300031539|Ga0307380_11205451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27586Open in IMG/M
3300031566|Ga0307378_10112604Not Available2812Open in IMG/M
3300031566|Ga0307378_11470428Not Available521Open in IMG/M
3300031586|Ga0315541_1027781All Organisms → cellular organisms → Bacteria2606Open in IMG/M
3300031643|Ga0315533_1026245All Organisms → cellular organisms → Bacteria2269Open in IMG/M
3300031669|Ga0307375_10093961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_272176Open in IMG/M
3300031698|Ga0315537_1051362All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria2246Open in IMG/M
3300031698|Ga0315537_1095707All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300031707|Ga0315291_10339729Not Available1454Open in IMG/M
3300031746|Ga0315293_10949631Not Available617Open in IMG/M
3300031746|Ga0315293_11094285Not Available561Open in IMG/M
3300031772|Ga0315288_11063482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_36_27713Open in IMG/M
3300031772|Ga0315288_11179543Not Available662Open in IMG/M
3300031949|Ga0214473_10688882Not Available1116Open in IMG/M
3300031949|Ga0214473_11084024Not Available839Open in IMG/M
3300031949|Ga0214473_11638543Not Available643Open in IMG/M
3300031949|Ga0214473_11744190Not Available618Open in IMG/M
3300031949|Ga0214473_11793914All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium RBG_16_35_8607Open in IMG/M
3300031952|Ga0315294_10736182Not Available860Open in IMG/M
3300031999|Ga0315274_10781862Not Available1016Open in IMG/M
3300031999|Ga0315274_12039226Not Available514Open in IMG/M
3300032020|Ga0315296_10544118Not Available606Open in IMG/M
3300032053|Ga0315284_10652134Not Available1246Open in IMG/M
3300032053|Ga0315284_10816272Not Available1077Open in IMG/M
3300032062|Ga0315551_10035142All Organisms → cellular organisms → Bacteria2752Open in IMG/M
3300032118|Ga0315277_11401762Not Available605Open in IMG/M
3300032118|Ga0315277_11588261Not Available555Open in IMG/M
3300032342|Ga0315286_11815325Not Available573Open in IMG/M
3300033489|Ga0299912_10203878Not Available1699Open in IMG/M
3300033489|Ga0299912_10743517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium757Open in IMG/M
3300034128|Ga0370490_0245950Not Available590Open in IMG/M
3300034169|Ga0370480_0088008Not Available1073Open in IMG/M
3300034281|Ga0370481_0359905Not Available534Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater10.53%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment9.21%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil7.24%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment5.92%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment5.92%
Wetlands BenthicEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Wetlands Benthic5.92%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil5.26%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil4.61%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water3.29%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.29%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.63%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment2.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.63%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.97%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.97%
Alkaline SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment → Alkaline Sediment1.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.97%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.97%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.32%
BenthicEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic1.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.32%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.32%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.66%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.66%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.66%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.66%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.66%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.66%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.66%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.66%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.66%
Lake WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water0.66%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.66%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.66%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.66%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.66%
Activated SludgeEngineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Activated Sludge0.66%
Bioremediated Contaminated GroundwaterEngineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater0.66%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908028Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2140918025Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
3300000362Alkaline sediment microbial communities from Cock Soda Lake, Kulunda Steppe, Russia - 1KL_011_SEDEnvironmentalOpen in IMG/M
3300000365Alkaline sediment microbial communities from Lake Tanatar, Kulunda Steppe, Russia - 9KL_010_SEDEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001335Wetlands benthic microbial communities from British Columbia, Canada - ML8EnvironmentalOpen in IMG/M
3300001533Benthic freshwater microbial communities from British Columbia, CanadaEnvironmentalOpen in IMG/M
3300001682Cattle waste upflow reactorEngineeredOpen in IMG/M
3300002220Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011EngineeredOpen in IMG/M
3300002538Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212EnvironmentalOpen in IMG/M
3300003830Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filterEnvironmentalOpen in IMG/M
3300004008Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2EnvironmentalOpen in IMG/M
3300004212Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00EnvironmentalOpen in IMG/M
3300004238Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00EnvironmentalOpen in IMG/M
3300004239Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_allEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005235Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20EnvironmentalOpen in IMG/M
3300005236Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80EnvironmentalOpen in IMG/M
3300005936Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKSEnvironmentalOpen in IMG/M
3300005939Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKXEnvironmentalOpen in IMG/M
3300005980Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203EnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300006792Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-DEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300006972Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-AEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009308Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_686d_3 SPAdesEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015370Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaGEnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300020163Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8mEnvironmentalOpen in IMG/M
3300022185Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022593Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025021Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20 (SPAdes)EnvironmentalOpen in IMG/M
3300025146Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1EnvironmentalOpen in IMG/M
3300025164Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025721Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D (SPAdes)EnvironmentalOpen in IMG/M
3300025836Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025868Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all (SPAdes)EnvironmentalOpen in IMG/M
3300025891Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)EnvironmentalOpen in IMG/M
3300027726Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027740Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeqEnvironmentalOpen in IMG/M
3300027792Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027811Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeqEnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027958Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-47 (SPAdes)EngineeredOpen in IMG/M
3300028028Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 296AEngineeredOpen in IMG/M
3300028156Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_50mEnvironmentalOpen in IMG/M
3300028168Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_50mEnvironmentalOpen in IMG/M
3300028191Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_50mEnvironmentalOpen in IMG/M
3300028193Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_80mEnvironmentalOpen in IMG/M
3300028664Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_1EnvironmentalOpen in IMG/M
3300029268 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300031255Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70EnvironmentalOpen in IMG/M
3300031274Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30EnvironmentalOpen in IMG/M
3300031275Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-90EnvironmentalOpen in IMG/M
3300031281Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-40EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031586Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-190EnvironmentalOpen in IMG/M
3300031643Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-30EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031698Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032020Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032062Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-90EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300034128Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16EnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
beta3_all_011298202124908028SoilMRAILMIAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIISWRR
b3_nosca_v_012723102140918025SoilAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIISWRR
SL_1KL_011_SEDDRAFT_1000164823300000362Alkaline SedimentMRMILIIAAIILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIAGIKTR*
SL_1KL_011_SEDDRAFT_1017904613300000362Alkaline SedimentMRMILIIVAIILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIVGIKKR*
SL_9KL_010_SEDDRAFT_1014938023300000365Alkaline SedimentMKIILTIAAVILLIVGILSLLPSFNWANVPTWRAILEIVVGGLILLGRYRRF*
JGIcombinedJ13530_10287117723300001213WetlandMRVILMIAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLLIGWRRH*
ML8_10000122723300001335Wetlands BenthicMRFILIIAAIVLLVVGILGLFPSIGWAAVPLWRAILEIVVGGLVLIIGIRTR*
ML8_10000447203300001335Wetlands BenthicMILIIAAIILLAVGILGLFPQFGWAHVALWRAILEIVVGGLVLIIGIRTR*
ML8_1000369173300001335Wetlands BenthicMRFILIIAAIVLLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGIRTR*
ML8_10006094123300001335Wetlands BenthicMRIILIIAAIVLVVVGILGLFPQFGWASVPLWRAILEIVAGGLVLIIGIRRR*
ML8_1001125963300001335Wetlands BenthicMRFILIIAAIVLLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLIIGIRTR*
ML8_1003994343300001335Wetlands BenthicMRMILIIASIVLLIVGILALLPSFGWADVPTWRAVLEIVVGGLVLFIGIRR*
ML8_1008772013300001335Wetlands BenthicMRFILIIAAIVLLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGVKTR*
ML8_1010181533300001335Wetlands BenthicMRIILIIAAIVLLAVGILSLFPQFGWASVPLWRAILEIVVGGLVLIIGI
ML8_1010873423300001335Wetlands BenthicMRFILIIAAIVLLLVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGIRTR*
MLSed_1021829713300001533BenthicMRIILIIAAIVLLAVGILSLFPQFGWASVPLWRAILEIVVGGLVLIIGIRTR*
MLSed_1026327123300001533BenthicMRFILIIAAIVLLLVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGISRR*
SAHD_10002187503300001682Activated SludgeMRIILILAAIVLLIVGILGLFPSVGWAAVPLWRAILEIVVGGLVLIVGIRKR*
MLSBCLC_1058107333300002220Hydrocarbon Resource EnvironmentsMRIILVIAAIILLAVGILGLFPQIGWANVPLWRAILEIVVGGLVLIAGMRKH*
JGI24132J36420_1018982913300002538Arctic Peat SoilMRFILILAAIVLAVVGVLGLFPSIGWAHVQLWRAVLEIVVGGLVLIIGARQR*
Ga0051980_1031016423300003830GroundwaterMRMILIIAAIILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIIGIKKR*
Ga0055446_1003318323300004008Natural And Restored WetlandsMRIILIIAAIILLVVGILGLFPQFGWASVQLWRAILEIIVGGLVLIIGVRTH*
Ga0066631_1019316213300004212GroundwaterMRIILVIAAIVLLAVGILGLFPSVSWANVPLWRAILEIVVGGLVLIIGVRKH*
Ga0066635_1024787023300004238GroundwaterMRIILVIAAIVLLAVGILGLFPSVSWANVPLWRAILEIVVGGLVLIIGVRKH
Ga0066650_1012503623300004239GroundwaterMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR*
Ga0066650_1023013513300004239GroundwaterMRFILIIAAIVLAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVSRR*
Ga0069718_1522544843300004481SedimentMRFILIIAAIILVIVGILGLFPSISWAHVQLWRAILEIVVGGLVLIIGARTR*
Ga0066637_1018050113300005235GroundwaterILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIIGIKKR*
Ga0066637_1022678013300005235GroundwaterILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIIGIRRR*
Ga0066637_1036701023300005235GroundwaterMRMILIIAAIILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIIGI
Ga0066636_1006484433300005236GroundwaterMRMILIIAAIILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIIGIRRR*
Ga0075124_1000580133300005936Lake WaterMRFILIIAAIILLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGVRKH*
Ga0075123_1024439613300005939Saline LakeMRSILIIAAIILLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGVKTH*
Ga0066798_1005909413300005980SoilMRFILIIASIILLVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLLIGVRTR*
Ga0075527_1020709413300006640Arctic Peat SoilMRFILIIAAIVLLVVGIAGLFPQFGWAHTQLWRSILEIVVGGLVLLIGVRTR*
Ga0075530_102417443300006792Arctic Peat SoilMRFILIIAAIVLLVVGIAGLLPQFGWAHTQMWRSILEIVVGGLVLLIGVRTR*
Ga0075524_1003227313300006950Arctic Peat SoilMRIILILTAIILLVVGILGLFPSIGWAHVQLWRAILEIVVGGLVL
Ga0075524_1011858623300006950Arctic Peat SoilMLAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIIGWRRY*
Ga0075524_1029012923300006950Arctic Peat SoilMRSILILAAIVLVVVGVLGLLPSFGWAHVQLWRAVLEIVVGGLVLIIGVRHH*
Ga0075518_108337923300006972Arctic Peat SoilMRFILIIAAIILLVVGILGLFPSIGWANVQLWRAILEIVVGGLVLIIGVRQR*
Ga0115371_1007409523300008470SedimentMRIILIIAAIILLAVGILGLFPSIGWAAVPLWRAILEIVVGGLVLIGGIRTH*
Ga0115371_1040710813300008470SedimentMRSILIIAAIILLVVGILGLLPQFGWANVPLWRAILEIVVGGLVLIIGVRKH*
Ga0115371_1071784213300008470SedimentMRFILIIAAIILLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLIIGVKKH*
Ga0105105_1003638513300009009Freshwater SedimentIMRVILMLAAIVLLVVGILGLFPQFGWAAVQLWRAILEIVVGALVLFIGWRTH*
Ga0105093_1040989423300009037Freshwater SedimentMTMRVILMLAAIVLLVVGILGLFPQFGWAAVQLWRAILEIVVGALVLFIGWRTH*
Ga0105095_1006439023300009053Freshwater SedimentMRIILILAAIVLAVVGILGLFPSIGWAVVPLWRAILEIVVGGLVLIIGIRTR*
Ga0105095_1076041313300009053Freshwater SedimentMRIILILAAIVLVVVGILGLFPSIGWAAVPLWRAILEIVVGGLILIIGISRR*
Ga0105099_1025188523300009082Freshwater SedimentMRIILILAAIVLAVVGILGLFPSIGWAVVPLWRAILEIVVGGLVLIIGIRTH*
Ga0115026_1078911713300009111WetlandMRIILILASIVLVIVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGIRTH*
Ga0114918_1027447233300009149Deep SubsurfaceFYYYIRLNKKNKKGKTIRFILILAAIVLLVVGILGLFPSFGWAHVQLWRAILEIVVGGLVLIIGVRQR*
Ga0114918_1056729613300009149Deep SubsurfaceMRIILILAAIVLVVVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGVRQR*
Ga0114918_1075149713300009149Deep SubsurfaceMRFILIIAAIVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVLLIGVRTH*
Ga0105102_1034787023300009165Freshwater SedimentMRFILIIAAIVLLVVGILGLFPSIGWASVPLWRAILEIVVGGLVLIIGISRR*
Ga0105100_1063914433300009166Freshwater SedimentMRIILILAAIVLAVVGILGLFPSIGWAVVPLWRAILEIVVGGLVLIIGISRR*
Ga0116593_104001213300009308SedimentMRIILILAAIVLLVVGILGLFPSIGWAAVPMWRAILEIVVGGLVLIIGIRTR*
Ga0114922_1004841253300011118Deep SubsurfaceMRLILIIAAIVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVLIVGVRTH*
Ga0114922_1007003373300011118Deep SubsurfaceMRFILIIAAIILLVVGILSLIPQFGWASVPLWRAILEIVVGGLVLVIGVRTH*
Ga0114922_1038296713300011118Deep SubsurfaceMRFILIIAAIILLVVGILGLFPQFGWAHVQLWRAILEIVVGGLVLIIGVRKH*
Ga0153916_1083017513300012964Freshwater WetlandsMRIILVIAAIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRKH*
Ga0182017_1001253123300014494FenMRAILMIAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIISWRR*
Ga0182021_1001256463300014502FenMRVILMLAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIIGWRRH*
Ga0180009_1021110413300015370GroundwaterIVLLVVGILGLFPQVGWASVQLWRAILEIVVGGLVLLIGVRQH*
Ga0180009_1029953613300015370GroundwaterMRFILILAAIVLAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIG
Ga0180009_1035261423300015370GroundwaterMRIILILAAIVLLVVGILGLFPQVGWASVQLWRAILEIVVGGLVLLIGVR
Ga0180009_1035305513300015370GroundwaterIVLLVVGILGLFPQVGWASVQLWRAILEIVVGGLVLLIGVRTH*
Ga0187850_1052055023300017941PeatlandMRFILIIAAIILAIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0187886_119797913300018018PeatlandKTMRFILIIAAIILAIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0187886_131173023300018018PeatlandMRFILTIAALVLAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLLIGVRRR
Ga0184636_102407423300018068Groundwater SedimentMRIILILAAIILLVVGILGLFPSIGWANVQLWRAILEIVVGGLVLIIGVRQH
Ga0184636_104725433300018068Groundwater SedimentMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0184631_1000286253300018070Groundwater SedimentMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTH
Ga0184631_1005423223300018070Groundwater SedimentMRIILIIAAIVLLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLIIGIRQR
Ga0184631_1007949043300018070Groundwater SedimentMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEVVVGGLVLIIGVRQR
Ga0194039_114914323300020163Anoxic Zone FreshwaterMRFILILAAIVLAVVGVLGLFPSIGWAHVQLWRAVLEIVVGGLVLIIGARQR
Ga0079039_152243323300022185Freshwater WetlandsMRIILILASIVLVIVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGVRTH
Ga0236338_113166223300022593FreshwaterMRAILMIAAIVLLVVGILGLFPSIGWAVVPLWRAILDIVVGGLVLII
Ga0210003_100547213300024262Deep SubsurfaceMRTILILAAIVLLVVGILGLFPQFGWASVQLWRAILEIVVGGLVLLIGVRTH
Ga0210003_103783233300024262Deep SubsurfaceMRFILIIAAIILLVVGILGLFPQFGWASVPLWRAILEIVVGGLVLFIGVRKH
Ga0210017_121196123300025021GroundwaterAIILLAVGILGLFPQFGWANVPLWRAILEIVVGGLVLIIGIRRR
Ga0209322_1000068433300025146SoilMKIILIIAAIILLVVGILGLFPSIGWANVPLWRAILEIVVGGLVLVIGVRSR
Ga0209521_1013612423300025164SoilMRIILIIAAIILLVVGILGLFPSISWANVELWRAILEIVVGGLVLIIGVRSR
Ga0209324_1067081023300025174SoilMRIILIIAAVILLVVGILGLFPSIGWANVPLWRAILEIVVGGLVLIIGVRSR
Ga0209587_104777443300025721Arctic Peat SoilIYCEKGKIMRFILIIAAIVLLVVGIAGLFPQFGWAHTQLWRSILEIVVGGLVLLIGVRTR
Ga0209587_120142513300025721Arctic Peat SoilMRFILIIAAIVLLVVGIAGLLPQFGWAHTQMWRSILEIVVGGLVLLIGVRTR
Ga0209748_121750013300025836Arctic Peat SoilVVGVLGLFPSIGWAHVQLWRAVLEIVVGGLVLIIGARQR
Ga0210051_111246613300025868GroundwaterLGLFPQFGWANVPLWRAILEIVVGGLVLIIGIKKR
Ga0210051_135442913300025868GroundwaterMRFILIIAAIVLAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVSRR
Ga0209585_1005484733300025891Arctic Peat SoilMRVILMLAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIIGWRIH
Ga0209285_1017189323300027726Freshwater SedimentMRIILILAAIVLAVVGILGLFPSIGWAVVPLWRAILEIVVGGLVLIIGIRTH
Ga0214474_101881333300027740SoilMRIILVIAAIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRHH
Ga0209287_1014457433300027792Freshwater SedimentMRLILIIAAIILLVVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGIRTH
Ga0256868_1008213523300027811SoilMRFILIIASIVLLAVGILGLFPSFGWAVVPLWRAILEIVVGGLVLLIGVRLR
Ga0256868_1042410613300027811SoilAIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRKH
Ga0209450_10000966123300027885Freshwater Lake SedimentMRVILMLAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIIGWRTH
Ga0209450_1083417233300027885Freshwater Lake SedimentAIVLLVMGILGLFPQIGWASVALWRAILEIVVGGLVLIIGWRTHK
Ga0209749_108700423300027958Bioremediated Contaminated GroundwaterMRFILIIASIILLVVGILGLFPSIGWAHVQLWRAILEIIVGGLVLIIGVRTR
Ga0265292_111424313300028028Landfill LeachateMRFILIIAAIVLAIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQS
Ga0268281_105802723300028156Saline WaterMRFILIIAAIVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVLLIGVRTH
Ga0268281_111758413300028156Saline WaterMRIILILAAIVLVVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0268277_104030653300028168Saline WaterLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0265595_109079743300028191Saline WaterVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRKR
Ga0265594_121556913300028193Saline WaterIMRIILILAAIVLVVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0302164_1018193113300028664FenVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIIGWRRH
(restricted) Ga0247842_1012225033300029268FreshwaterMRFILIIAAIVLLVVGIAGLLPQFGWAHVQLWRAVLEIVVGGLVLLIGVRTR
(restricted) Ga0247841_1010688633300029286FreshwaterMRFILILAAIVLVVVGVLGLLPSFGWAHVQLWRAVLEIVVGGLVLIIGVRQH
(restricted) Ga0247841_1044824923300029286FreshwaterMRFILIIAAIVLAVVGVLGLFPSIGWAHVQLWRAVLEIVVGGLVLIIGVRQR
(restricted) Ga0247841_1066367613300029286FreshwaterMRFILILAAIVLAVVGVLGLFPSIGWAHVQLWRAVLEIVVGGLVLIIGVRQR
Ga0299915_1056522533300030613SoilGMMRFILIIASIVLLAVGILGLFPSFGWAVVPLWRAILEIIVGGLVLLIGVRLR
Ga0299915_1099379613300030613SoilMRFILIIAAIILAVVGILGLFPSIGWANVPLWRAILEIVVGGLVLVIGVRSR
Ga0315554_101179863300031255Salt Marsh SedimentMRIILIIAAVILLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0315554_101182953300031255Salt Marsh SedimentMKIILIIAAIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIVGISRR
Ga0315554_106074733300031255Salt Marsh SedimentMRILLIIAAIVLLVVGILGLFPQFGWASVQLWRAILEIVVGGLVLIIGVRQH
Ga0315554_109691743300031255Salt Marsh SedimentMRIILIIAAIVLLAVGILGLFPSIGWAHVELWRAILEIIVGGLVLIVGISRR
Ga0307442_118612313300031274Salt MarshMRLILIIAAIILLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIAGVRTH
Ga0307437_122083123300031275Salt MarshALVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0307420_104391113300031281Salt MarshMKIILIIAAIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIVGI
Ga0307380_1006189163300031539SoilMRIILILAAIVLVVVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGIRTH
Ga0307380_1013828913300031539SoilMRFILIIAAIILVVVGILGLFPQFGWAHVQLWRAILEIVVGGLVLIIGI
Ga0307380_1043845033300031539SoilMRIILILAAIVLLVVGIFGLFPQFGWASVQLWRAILEIVVGGLVLLIGVRQH
Ga0307380_1120545123300031539SoilMRFILIIAAIILAVVGILGLFPSIAWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0307378_1011260443300031566SoilMRIILILAAIVLVVVGILGLFPSIGWAHVELWRAILEIVVGGLVLIVGISRR
Ga0307378_1147042813300031566SoilMRFILIIAAIILVVVGILGLFPQFGWAHVQLWRAILEIVVGGLVLIIGIRTH
Ga0315541_102778143300031586Salt Marsh SedimentMRIILILAAVVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0315533_102624543300031643Salt Marsh SedimentMRIILILAAVVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLV
Ga0307375_1009396123300031669SoilMRTILIIASIVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVLLIGVRTH
Ga0315537_105136223300031698Salt Marsh SedimentMRIILILAAIVLLVVGIVGLFPQFGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0315537_109570713300031698Salt Marsh SedimentMRIILIIAAIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0315291_1033972923300031707SedimentMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVSRR
Ga0315293_1094963113300031746SedimentAIVLLVVGILGLFPSIGWAHVILWRAILEIVVGGLVLIIGVRQR
Ga0315293_1109428523300031746SedimentMRFILIIAAIILAIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTR
Ga0315288_1106348213300031772SedimentAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTR
Ga0315288_1117954313300031772SedimentMRIILILAAIVLAIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLLIGVRTH
Ga0214473_1068888213300031949SoilRIILILAAIVLVVVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGVRTH
Ga0214473_1108402423300031949SoilMRIILILAAIVLLVVGILGLFPSIGWAAVQLWRAILEIVVGGLVLIIGVRQR
Ga0214473_1163854323300031949SoilMRIILILAAIVLVIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0214473_1174419033300031949SoilMRIILILAAIVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVL
Ga0214473_1179391423300031949SoilMRFILIIASIILAVVGILGLFPSISWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0315294_1073618233300031952SedimentMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLLIGVRTH
Ga0315274_1078186223300031999SedimentLIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVSRR
Ga0315274_1203922613300031999SedimentMRFILIIAAIILAVVGILGLFPSISWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0315296_1054411823300032020SedimentMRFILIIASIILLVVGILGLFPSFSWAVVPLWRAILEIVVGGLVLIIGLRQH
Ga0315284_1065213433300032053SedimentMRIILILASIVLVVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTR
Ga0315284_1081627223300032053SedimentMRFILIIAAIILAVVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTR
Ga0315551_1003514233300032062Salt Marsh SedimentMRIILIIAALVLLVVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRTH
Ga0315277_1140176233300032118SedimentRFILIIAAIILAIVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRTR
Ga0315277_1158826133300032118SedimentVGILGLFPSIGWAHVQLWRAILEIVVGGLVLIIGVRQR
Ga0315286_1181532523300032342SedimentKEGKSMRVILMIAAIILLVVGVLGLFPSMGWAHVQLWRAVLEIVVGGLVLIIGWRRH
Ga0299912_1020387833300033489SoilMRIILIIASIVLLAVGILGLFPSIGWAHVELWRAILEIVVGGLVLIIGVRHH
Ga0299912_1074351713300033489SoilMRIILILAAIILLVVGILGLFPSIGWANVPLWRAILEIVVGGLVL
Ga0370490_0245950_60_2183300034128Untreated Peat SoilMRIILILAAIVLLAVGILGLFPQFGWAHVELWRAILEIVVGGLVLIIGISRR
Ga0370480_0088008_412_5703300034169Untreated Peat SoilMRVILMIAAIVLLVVGILGLFPSMTWAHVQLWRAILEIVVGGLVLLIGWRRH
Ga0370481_0359905_275_4333300034281Untreated Peat SoilMRVILMLAAIVLLVVGILGLFPSMGWAHVQLWRAILEIVVGGLVLIIGWRRY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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