Metagenome / Metatranscriptome Family F041826

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041826
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	49 residues
Representative Sequence	ASPNRENLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW
Number of Associated Samples	77
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.63 %
% of genes near scaffold ends (potentially truncated)	98.11 %
% of genes from short scaffolds (< 2000 bps)	85.53 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.006 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (37.736 % of family members)
Environment Ontology (ENVO)	Unclassified (92.453 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.648 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.00% β-sheet: 0.00% Coil/Unstructured: 72.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF00005	ABC_tran	75.47
PF00313	CSD	8.81
PF08753	NikR_C	7.55
PF01402	RHH_1	3.77
PF14833	NAD_binding_11	1.26
PF01949	DUF99	0.63
PF01557	FAA_hydrolase	0.63
PF00535	Glycos_transf_2	0.63
PF00950	ABC-3	0.63
PF03446	NAD_binding_2	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0864	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	Transcription [K]	7.55
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	0.63
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	0.63
COG1628	Endonuclease V homolog, UPF0215 family	General function prediction only [R]	0.63
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
All Organisms	root	All Organisms	38.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
cellular organisms	root	All Organisms → cellular organisms	38.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	38.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	37.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	37.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	27.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.01 %
Candidatus Nitrosopumilus sediminis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3.77 %
Candidatus Nitrosopumilus koreensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	3.77 %
Nitrosopumilus maritimus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1.26 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000152\|LPjun08P12500mDRAFT_c1002487	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3784	Open in IMG/M
3300000190\|LPjun09P161000mDRAFT_c1025190	Not Available	989	Open in IMG/M
3300005401\|Ga0066857_10200347	Not Available	709	Open in IMG/M
3300005508\|Ga0066868_10253586	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
3300006011\|Ga0066373_10126243	Not Available	733	Open in IMG/M
3300006303\|Ga0068490_1346704	Not Available	760	Open in IMG/M
3300006304\|Ga0068504_1208135	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1526	Open in IMG/M
3300006304\|Ga0068504_1306711	Not Available	650	Open in IMG/M
3300006306\|Ga0068469_1233060	Not Available	524	Open in IMG/M
3300006306\|Ga0068469_1289555	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1244	Open in IMG/M
3300006306\|Ga0068469_1418096	Not Available	649	Open in IMG/M
3300006306\|Ga0068469_1510620	Not Available	669	Open in IMG/M
3300006308\|Ga0068470_1171936	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2210	Open in IMG/M
3300006308\|Ga0068470_1216622	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2640	Open in IMG/M
3300006308\|Ga0068470_1290110	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1376	Open in IMG/M
3300006308\|Ga0068470_1303354	Not Available	1537	Open in IMG/M
3300006308\|Ga0068470_1322391	Not Available	1537	Open in IMG/M
3300006308\|Ga0068470_1322393	Not Available	854	Open in IMG/M
3300006308\|Ga0068470_1335965	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	3181	Open in IMG/M
3300006308\|Ga0068470_1367858	Not Available	522	Open in IMG/M
3300006308\|Ga0068470_1392264	Not Available	934	Open in IMG/M
3300006308\|Ga0068470_1401600	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	925	Open in IMG/M
3300006308\|Ga0068470_1406289	Not Available	643	Open in IMG/M
3300006308\|Ga0068470_1899104	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	954	Open in IMG/M
3300006309\|Ga0068479_1115716	Not Available	669	Open in IMG/M
3300006309\|Ga0068479_1154866	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1243	Open in IMG/M
3300006310\|Ga0068471_1193801	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	2752	Open in IMG/M
3300006310\|Ga0068471_1206296	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	9539	Open in IMG/M
3300006310\|Ga0068471_1267406	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	4536	Open in IMG/M
3300006310\|Ga0068471_1357022	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1356	Open in IMG/M
3300006310\|Ga0068471_1425736	Not Available	842	Open in IMG/M
3300006310\|Ga0068471_1427674	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4832	Open in IMG/M
3300006310\|Ga0068471_1493943	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	6382	Open in IMG/M
3300006310\|Ga0068471_1569675	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	2629	Open in IMG/M
3300006311\|Ga0068478_1268871	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1612	Open in IMG/M
3300006313\|Ga0068472_10285309	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	1648	Open in IMG/M
3300006313\|Ga0068472_10489592	Not Available	602	Open in IMG/M
3300006313\|Ga0068472_10630151	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1818	Open in IMG/M
3300006313\|Ga0068472_10709839	Not Available	882	Open in IMG/M
3300006316\|Ga0068473_1280194	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	2159	Open in IMG/M
3300006316\|Ga0068473_1391928	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1553	Open in IMG/M
3300006316\|Ga0068473_1669491	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1242	Open in IMG/M
3300006323\|Ga0068497_1069715	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3386	Open in IMG/M
3300006323\|Ga0068497_1381295	Not Available	616	Open in IMG/M
3300006323\|Ga0068497_1381497	Not Available	621	Open in IMG/M
3300006323\|Ga0068497_1382350	Not Available	849	Open in IMG/M
3300006324\|Ga0068476_1430291	Not Available	656	Open in IMG/M
3300006324\|Ga0068476_1451491	Not Available	722	Open in IMG/M
3300006324\|Ga0068476_1468113	Not Available	568	Open in IMG/M
3300006325\|Ga0068501_1172303	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	3200	Open in IMG/M
3300006325\|Ga0068501_1187770	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1107	Open in IMG/M
3300006325\|Ga0068501_1523222	Not Available	947	Open in IMG/M
3300006326\|Ga0068477_1454963	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1551	Open in IMG/M
3300006330\|Ga0068483_1144673	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	4009	Open in IMG/M
3300006335\|Ga0068480_1154794	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	5826	Open in IMG/M
3300006335\|Ga0068480_1323671	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1832	Open in IMG/M
3300006335\|Ga0068480_1331315	Not Available	648	Open in IMG/M
3300006335\|Ga0068480_1359737	Not Available	734	Open in IMG/M
3300006335\|Ga0068480_1372961	Not Available	819	Open in IMG/M
3300006335\|Ga0068480_1377103	Not Available	905	Open in IMG/M
3300006335\|Ga0068480_1434430	Not Available	672	Open in IMG/M
3300006335\|Ga0068480_1702202	Not Available	670	Open in IMG/M
3300006335\|Ga0068480_1786891	Not Available	691	Open in IMG/M
3300006336\|Ga0068502_1313700	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300006336\|Ga0068502_1313701	Not Available	1499	Open in IMG/M
3300006336\|Ga0068502_1439707	Not Available	590	Open in IMG/M
3300006336\|Ga0068502_1439709	Not Available	588	Open in IMG/M
3300006336\|Ga0068502_1488056	Not Available	584	Open in IMG/M
3300006338\|Ga0068482_1374960	Not Available	930	Open in IMG/M
3300006338\|Ga0068482_1383033	Not Available	646	Open in IMG/M
3300006338\|Ga0068482_1390954	Not Available	871	Open in IMG/M
3300006338\|Ga0068482_1458698	Not Available	894	Open in IMG/M
3300006339\|Ga0068481_1252934	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2663	Open in IMG/M
3300006339\|Ga0068481_1255152	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	2879	Open in IMG/M
3300006339\|Ga0068481_1363352	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1913	Open in IMG/M
3300006339\|Ga0068481_1444490	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1749	Open in IMG/M
3300006339\|Ga0068481_1446013	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1776	Open in IMG/M
3300006339\|Ga0068481_1484841	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	2811	Open in IMG/M
3300006340\|Ga0068503_10594918	Not Available	598	Open in IMG/M
3300006340\|Ga0068503_11134819	Not Available	575	Open in IMG/M
3300006341\|Ga0068493_10533929	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1409	Open in IMG/M
3300006341\|Ga0068493_10640287	Not Available	731	Open in IMG/M
3300006341\|Ga0068493_10726767	Not Available	918	Open in IMG/M
3300006344\|Ga0099695_1202198	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1703	Open in IMG/M
3300006344\|Ga0099695_1315207	Not Available	631	Open in IMG/M
3300006346\|Ga0099696_1333098	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1079	Open in IMG/M
3300006347\|Ga0099697_1230360	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	2703	Open in IMG/M
3300006347\|Ga0099697_1433430	Not Available	590	Open in IMG/M
3300006414\|Ga0099957_1240241	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1801	Open in IMG/M
3300006414\|Ga0099957_1240476	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1680	Open in IMG/M
3300006414\|Ga0099957_1461618	Not Available	936	Open in IMG/M
3300006567\|Ga0099958_1164088	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1512	Open in IMG/M
3300006567\|Ga0099958_1250261	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300006567\|Ga0099958_1286811	Not Available	612	Open in IMG/M
3300006567\|Ga0099958_1293449	Not Available	886	Open in IMG/M
3300006567\|Ga0099958_1294783	Not Available	674	Open in IMG/M
3300006567\|Ga0099958_1310090	Not Available	795	Open in IMG/M
3300006567\|Ga0099958_1329802	Not Available	601	Open in IMG/M
3300006567\|Ga0099958_1365469	Not Available	619	Open in IMG/M
3300007160\|Ga0099959_1132485	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1907	Open in IMG/M
3300007160\|Ga0099959_1135128	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2773	Open in IMG/M
3300007509\|Ga0105012_1194016	Not Available	642	Open in IMG/M
3300008223\|Ga0105348_1115064	Not Available	780	Open in IMG/M
3300008249\|Ga0105353_1124616	Not Available	611	Open in IMG/M
3300008251\|Ga0105359_10272750	Not Available	834	Open in IMG/M
3300008254\|Ga0105351_1100628	Not Available	985	Open in IMG/M
3300009110\|Ga0117925_1120438	Not Available	952	Open in IMG/M
3300009126\|Ga0118723_1107034	Not Available	1695	Open in IMG/M
3300012950\|Ga0163108_10412790	Not Available	871	Open in IMG/M
3300012950\|Ga0163108_10871809	Not Available	581	Open in IMG/M
3300013109\|Ga0171649_125346	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1671	Open in IMG/M
3300020369\|Ga0211709_10174503	Not Available	651	Open in IMG/M
3300020375\|Ga0211656_10094054	Not Available	936	Open in IMG/M
3300020383\|Ga0211646_10002165	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	9758	Open in IMG/M
3300020390\|Ga0211555_10345591	Not Available	554	Open in IMG/M
3300020447\|Ga0211691_10046895	Not Available	1536	Open in IMG/M
3300021068\|Ga0206684_1135973	Not Available	817	Open in IMG/M
3300021089\|Ga0206679_10301974	Not Available	869	Open in IMG/M
3300021348\|Ga0206695_1183917	Not Available	624	Open in IMG/M
3300021352\|Ga0206680_10078653	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1266	Open in IMG/M
3300021352\|Ga0206680_10234820	Not Available	711	Open in IMG/M
3300021442\|Ga0206685_10123199	Not Available	861	Open in IMG/M
3300021443\|Ga0206681_10122839	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1015	Open in IMG/M
3300021791\|Ga0226832_10174565	Not Available	828	Open in IMG/M
3300023481\|Ga0257022_1084776	Not Available	524	Open in IMG/M
3300025220\|Ga0208055_1027165	Not Available	699	Open in IMG/M
3300025222\|Ga0208831_1012845	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1342	Open in IMG/M
3300025277\|Ga0208180_1063481	Not Available	908	Open in IMG/M
3300026207\|Ga0208895_1061926	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1048	Open in IMG/M
3300026213\|Ga0208131_1151753	Not Available	545	Open in IMG/M
3300026259\|Ga0208896_1090421	Not Available	877	Open in IMG/M
3300026265\|Ga0208765_1050963	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1189	Open in IMG/M
3300028190\|Ga0257108_1177013	Not Available	612	Open in IMG/M
3300028192\|Ga0257107_1090800	Not Available	917	Open in IMG/M
3300028535\|Ga0257111_1000228	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	22780	Open in IMG/M
3300031757\|Ga0315328_10649690	Not Available	599	Open in IMG/M
3300031773\|Ga0315332_10605043	Not Available	682	Open in IMG/M
3300031800\|Ga0310122_10330322	Not Available	664	Open in IMG/M
3300031801\|Ga0310121_10114890	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1710	Open in IMG/M
3300031801\|Ga0310121_10325828	Not Available	892	Open in IMG/M
3300031801\|Ga0310121_10467911	Not Available	703	Open in IMG/M
3300031801\|Ga0310121_10714018	Not Available	530	Open in IMG/M
3300031802\|Ga0310123_10393015	Not Available	893	Open in IMG/M
3300031803\|Ga0310120_10429484	Not Available	672	Open in IMG/M
3300031886\|Ga0315318_10344393	Not Available	854	Open in IMG/M
3300031886\|Ga0315318_10584807	Not Available	633	Open in IMG/M
3300031886\|Ga0315318_10636832	Not Available	602	Open in IMG/M
3300032019\|Ga0315324_10106853	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1052	Open in IMG/M
3300032048\|Ga0315329_10182836	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1097	Open in IMG/M
3300032048\|Ga0315329_10184537	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1092	Open in IMG/M
3300032127\|Ga0315305_1151126	Not Available	615	Open in IMG/M
3300032130\|Ga0315333_10554155	Not Available	538	Open in IMG/M
3300032132\|Ga0315336_1293009	Not Available	550	Open in IMG/M
3300032278\|Ga0310345_10821955	Not Available	904	Open in IMG/M
3300032278\|Ga0310345_11245985	Not Available	727	Open in IMG/M
3300032278\|Ga0310345_12018629	Not Available	560	Open in IMG/M
3300032360\|Ga0315334_10017906	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	4753	Open in IMG/M
3300032360\|Ga0315334_10137629	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1924	Open in IMG/M
3300032360\|Ga0315334_10510329	Not Available	1030	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	78.62%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.66%
Coastal	Environmental → Aquatic → Marine → Coastal	2.52%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.26%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	37.74%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	25.16%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.72%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.66%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.52%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.63%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	0.63%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	37.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	23.90%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	11.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.29%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.03%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.14%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.52%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	2.52%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.26%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.63%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.63%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000152	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500m	Environmental	Open in IMG/M
3300000190	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 1000m	Environmental	Open in IMG/M
3300005401	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental	Open in IMG/M
3300006303	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_1_1000m	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006309	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006344	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007509	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300008223	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN8C Hudson Canyon	Environmental	Open in IMG/M
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental	Open in IMG/M
3300008251	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM8C Gulf of Mexico	Environmental	Open in IMG/M
3300008254	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN4B Hudson Canyon	Environmental	Open in IMG/M
3300009110	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009126	Combined Assembly of Gp0139357, Gp0139356	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300013109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300020369	Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)	Environmental	Open in IMG/M
3300020375	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020390	Marine microbial communities from Tara Oceans - TARA_B100002049 (ERX555953-ERR598985)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021348	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300023481	Marine microbial mat from Loihi Seamount, Hawaii, USA - Ku'kulu Base Individual Assembly	Environmental	Open in IMG/M
3300025220	Marine microbial communities from the Deep Pacific Ocean - MP2159 (SPAdes)	Environmental	Open in IMG/M
3300025222	Marine microbial communities from the Deep Pacific Ocean - MP2253 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental	Open in IMG/M
3300026213	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026265	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203 (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032019	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032127	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun08P12500mDRAFT_10024871	3300000152	Marine	NRENFLKTKNRPIALQSKEMAIPDISACGRDSYATDSKVIVHQW*
LPjun09P161000mDRAFT_10251903	3300000190	Marine	RASPNRENFLKTKNNPTALQSKEMAIPDISACGIDSYATASKVIVHQ*
Ga0066857_102003471	3300005401	Marine	NREYLLKTRNSPTALQRMEMIIPDASACGMDSYVTASKVILDQW*
Ga0066868_102535861	3300005508	Marine	KRPNATPPNAECARASPNRENLLKTRNSPTALQRMEMIIPDTNACGIDSYDTASKVILDQW*
Ga0066373_101262431	3300006011	Marine	EYLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068490_13467042	3300006303	Marine	PPNAECARASPNRENFLRTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILDQW*
Ga0068504_12081351	3300006304	Marine	PSPNRENFLKTRNSPTALQSREMAIPDTSACGIDSYDTASKVILHQW*
Ga0068504_13067112	3300006304	Marine	KASPNRENFLKTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILHQW*
Ga0068469_12330602	3300006306	Marine	KTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0068469_12895553	3300006306	Marine	MKRPNATPPNAECARASPNREYFLRTKNSPTALLRMEMMIPDTSACGIDSYVTASKVILDQW*
Ga0068469_14180961	3300006306	Marine	ASPNRENLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068469_15106202	3300006306	Marine	AECARASPNRENFLKTRNSPMALQRKEMAIPDTKACGIDSYDTASKVILHQ*
Ga0068470_11719361	3300006308	Marine	QNYLRTRNSPTALQRMEMIIPDTNACGIDSYDTASKVILDQ*
Ga0068470_12166221	3300006308	Marine	PNATPPNAECARASPNRENFLKTRNKPTALQTREMAIPDISACGIDSYDTASKVNLDQW*
Ga0068470_12901103	3300006308	Marine	IRFASASPNREYFLKTKNSPTALQRMEMIIPDASACGMDSYVTASKVILDQW*
Ga0068470_13033544	3300006308	Marine	RPNATPPNAECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW
Ga0068470_13223914	3300006308	Marine	RPIALQSKEMAIPDTSACGIDSYDTASNVILHQW*
Ga0068470_13223932	3300006308	Marine	PNRENFLKTKNRPTALQSREMAIPDISACGIDSYDTASKVILHQ*
Ga0068470_13359651	3300006308	Marine	PMKRPNATPPNAECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQ*
Ga0068470_13678581	3300006308	Marine	NAECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068470_13922641	3300006308	Marine	KTRNSPTALQSSEMAIPDISACGIDSYVMDSKVILHQW*
Ga0068470_14016003	3300006308	Marine	MKRPNATPPNAECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068470_14062891	3300006308	Marine	NDTPPNAECARASPNREYLLKTRNRPTALQRMEMIIPDTSACGIDSYDTASKVFLHQW*
Ga0068470_18991043	3300006308	Marine	NPMKRPNATPPNAECARASPNREYFLRTRNSPTALQRMEMMIPDTSACGIDSYDTASKVILDQW*
Ga0068479_11157161	3300006309	Marine	SMATLHASHKGLSPMKRPNATPPNAECARASPNRENLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068479_11548663	3300006309	Marine	REYFLKTRNSPTALQRMEMIIPDTSACGIDSYVTASKVILDQW*
Ga0068471_11938011	3300006310	Marine	PNAECARASPNKEYLLKTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILHQW*
Ga0068471_120629619	3300006310	Marine	YLLKTKNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0068471_12674061	3300006310	Marine	SPTALQRMEMIIPDASSCGMDSYVTASKVILDQW*
Ga0068471_13570221	3300006310	Marine	ECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068471_14257362	3300006310	Marine	LKTKNRPITLQSKEMAIPDTSACGIDSYDTASNVILRQW*
Ga0068471_142767411	3300006310	Marine	KTKNSPTALQSREMAIPDMSACGIDSYATDSKVIAHQW*
Ga0068471_149394312	3300006310	Marine	MERPNATPPNAECARACPNKEYLHKTKKSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0068471_15696751	3300006310	Marine	NRENFLRTRNRPMALQKMEMTIPDTSACGIDSYDTASKVILHQW*
Ga0068478_12688711	3300006311	Marine	RASPNRENLLKTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILDQW*
Ga0068472_102853094	3300006313	Marine	NREYFLKTKNSPTALQRMEMIIPDTSACGIDSYVTASKVILHQW*
Ga0068472_104895922	3300006313	Marine	TPPNAECARASPNRENFLKTRNSPTALQRMEMIIPDTSACGMDSYDTASKVILHQW*
Ga0068472_106301511	3300006313	Marine	SPNREYFLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVFLDQW*
Ga0068472_107098392	3300006313	Marine	LKTRNSPTALQSREMAIPDIIACGMDSYVTDSKVIAHQW*
Ga0068473_12801945	3300006316	Marine	RNSPTALQIREMAIPDITACGIDSYVTDSKVIAHQW*
Ga0068473_13919284	3300006316	Marine	AECARASPNRENFLKTRNSPTTLQSKEMAIPDISACGIDSYDTASKVILHQ*
Ga0068473_16694913	3300006316	Marine	NAECARASPNRENFLKTRNKPTALQTREMAIPDISACGMDSYVTASKVILHQW*
Ga0068497_10697151	3300006323	Marine	ARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068497_13812952	3300006323	Marine	PNATPPNAECAKASPNKEYLLKTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0068497_13814971	3300006323	Marine	AECAKASPNRENFLKTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0068497_13823501	3300006323	Marine	MKRPNATPPNAECAKASPNREYFLKTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILHQW*
Ga0068476_14302911	3300006324	Marine	EYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0068476_14514912	3300006324	Marine	AECAKASPNRENLLKTRNSPTALQSREMAIPDITACGIDSYVTDSKVIAHQW*
Ga0068476_14681131	3300006324	Marine	FLKTRNSPMALQRMEMVIPDASACGIDSYDTASKVILDQW*
Ga0068501_11723031	3300006325	Marine	RENFLKTKNNPSTLQSREMAIPDISACGIDSYDTASKVILDQW*
Ga0068501_11877703	3300006325	Marine	PNAECARASPNREYFLKTNNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0068501_15232221	3300006325	Marine	SPMALQRMEMAIPDTKACGIDSYDTASKVILHQW*
Ga0068477_14549635	3300006326	Marine	EYFLKTRNSPTALQRMEMIIPDTSACGMDSYDTASKVILHQW*
Ga0068483_11446738	3300006330	Marine	KRENFLKTKNSPTALQSREMAIPDISACGMDSYDTASKVILHQW*
Ga0068480_11547941	3300006335	Marine	ATPPNAECARASPNRENFLKTRNSPTALQRMEMAIPDTSACGIDSYDTASKVILDQ*
Ga0068480_13236714	3300006335	Marine	PNAECARASPKKEYLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068480_13313152	3300006335	Marine	RASPNRENLLKTRNSPMALQRMEMAIPDTSACGIDSYDTASKVILHQ*
Ga0068480_13597371	3300006335	Marine	RASPNKEYLLKPKNSPTALQRMEMLIPDTSACGIDSYDTASKVILHQW*
Ga0068480_13729611	3300006335	Marine	TPPNAECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068480_13771031	3300006335	Marine	PNAECAKASPNREYFLKTKNIPTALQRMEMIIPDTSACGIDSYVTASKVILHQW*
Ga0068480_14344302	3300006335	Marine	ATPPNAECARASPIKEYLLKTRNSPTALQSREMAIPDISACGMDSYVTDSKVIAHQW*
Ga0068480_17022022	3300006335	Marine	PNATPPNAECARASPNREYLLKTRSSPPALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0068480_17868912	3300006335	Marine	ATPPNAECARASPNREYLLKTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0068502_13137001	3300006336	Marine	ATPPNAECAKASPNREYFLRTKNSPTALQRMEMIIPDASACGIDSYVTASKVILDQW*
Ga0068502_13137011	3300006336	Marine	SPNREYLLKTRNSPTALQRMEMIIPDASACGIDSYVTASKVILDQW*
Ga0068502_14397071	3300006336	Marine	ASPNRENFLKTKNNPTALQSREMAIPDINACGIDSYDTASKVILHQ*
Ga0068502_14397091	3300006336	Marine	RENFLKTKNRPTALQSREMAIPDINACGIDSYDTASKVILHQ*
Ga0068502_14880561	3300006336	Marine	SPNRESFRKTKNRPIALQSKEMAIPDISACGIDSYATDSKVIGHQ*
Ga0068482_13749602	3300006338	Marine	NPMKRPNATPPNAECAKASPNREYFLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0068482_13830331	3300006338	Marine	NATPPNAECAKASPNREYFLKTRNSPTALQRMEMIIPDTSACGIDSYVTASKVILHQW*
Ga0068482_13909541	3300006338	Marine	ASPNRENFLRTRNSPMALQRMEMAIPDTSACGIDSYDTASKVILDQW*
Ga0068482_14586981	3300006338	Marine	CARASPNRENFLRTRNSPMALQRMEMAIPDTRACGIDSYDTASKVILDQW*
Ga0068481_12529347	3300006339	Marine	AECAKASPNRENFLKTRNSPTALQSREMAIPDIIACGMDSYVTDSKVIAHQW*
Ga0068481_12551529	3300006339	Marine	AECARASPNREYLLKTRNSPTTLQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068481_13633521	3300006339	Marine	NKEYLLKTRNSPTALQRMEMIIPDTKACGIDSYDTASKVILDQW*
Ga0068481_14444901	3300006339	Marine	PNATPPNAECAGASPNRENFLRTRNSPIALQRMEMAIPDTKACGIDSYDTASKVILDQW*
Ga0068481_14460135	3300006339	Marine	AECARASPNRAYLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0068481_14848417	3300006339	Marine	RASPNREYLLKTKNSPTALQRMEMIIPATSACGIDTYDTASKVILDQW*
Ga0068503_105949181	3300006340	Marine	KTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILHQW*
Ga0068503_111348191	3300006340	Marine	NNPMALQRMEMAIPDIRACGIDSYDTASKVILHQW*
Ga0068493_105339294	3300006341	Marine	RPNATPPNAECARASPNRENFLRTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILDQW
Ga0068493_106402871	3300006341	Marine	ASPNRENFLKTRNSPTALQRMEMIIPDASACGMDSYVTASKVILDQW*
Ga0068493_107267671	3300006341	Marine	SPMALQRMEMAIPDTKACGIDSYDTASKVILLQW*
Ga0099695_12021985	3300006344	Marine	NAECAKASPNREYFLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0099695_13152071	3300006344	Marine	MKRPNATPPNAECARASPNREYLLKTKNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW*
Ga0099696_13330983	3300006346	Marine	RPNATPPNAECAKASPNREYFLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW
Ga0099697_12303601	3300006347	Marine	RASPNRENFLKTRNSPTALQTREMAIPDISACGIDSYDTASKVILHQW*
Ga0099697_14334301	3300006347	Marine	NRENFLKTRNSPTTLQSKEMAIPDISACGIDSYDTASKVILHQW*
Ga0099957_12402411	3300006414	Marine	CARASPNREYLLKTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILHQW*
Ga0099957_12404764	3300006414	Marine	LLKTRNSPTALQSREMAIPDITACGIDSYVTDSKVIAHQW*
Ga0099957_14616181	3300006414	Marine	PNAECAKASPNREYFLRTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0099958_11640881	3300006567	Marine	TRNSPTALQRMEMIIPDASACGMDSYVTASKVILDQW*
Ga0099958_12502612	3300006567	Marine	PPNAECARASPNRENFLRTRNRPTALQSREMAIPDTSACGIDSYDTASKVILDQW*
Ga0099958_12868111	3300006567	Marine	ECARASPNREYLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW*
Ga0099958_12934492	3300006567	Marine	PPNAECARASPNRENFLKTKNNPMALQRMEMAIPDTKACGIDSYDTASKVILHQW*
Ga0099958_12947831	3300006567	Marine	SPNRENLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0099958_13100902	3300006567	Marine	RASPNREYLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW*
Ga0099958_13298022	3300006567	Marine	ARASPNRENFLKTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILDQW*
Ga0099958_13654691	3300006567	Marine	PNAECAKASPNRENFLKTRNSPTALQSREMAIPDIIACGMDSYVTDSKVIAHQW*
Ga0099959_11324855	3300007160	Marine	ATPPNAECARASPNRENFLKTRNSPTALQSREMAIPDTSVCGIDSYDTASKVILHQW*
Ga0099959_11351287	3300007160	Marine	PMKRPNATPPNAECARASPNRENFLRTRNSPMALQRMEIAIPDISACGIDSYDTASKVILDQW*
Ga0105012_11940161	3300007509	Marine	ECAKASPKREYLLKTKNSPTALQRMEMIIPDTMACGIDSYDTASKVILDQW*
Ga0105348_11150642	3300008223	Methane Seep Mesocosm	FRKTKNRPIALQSKEMAIPDINACGIDSYATDSKVIGHQ*
Ga0105353_11246161	3300008249	Methane Seep Mesocosm	RNSPTALQTREMAIPDISACGMDSYVMDSKVILHQW*
Ga0105359_102727502	3300008251	Methane Seep Mesocosm	TPPNAECAKASPNRENLLKTRNSPTALQSREMAIPDISACGIDSYVTDSKVILNQW*
Ga0105351_11006282	3300008254	Methane Seep Mesocosm	MKRPNATPPNAECARASPNRENFLRTRNSPTALQRMEMIIPDTSACGIDSYVTASKVILDQW*
Ga0117925_11204382	3300009110	Marine	ARASPNRENFLKTRNSPTALQRMEMAIPDISACGIDSYDTASKVILDQW*
Ga0118723_11070344	3300009126	Marine	RNSPMALQRMEMIIPDTNACGIDSYDTASKVILDQW*
Ga0163108_104127901	3300012950	Seawater	CAKASPNRENFRKTKNKPIALQSKEMAIPDINACGIDSYATDSKVI*
Ga0163108_108718092	3300012950	Seawater	ECARASPNREYLLKTRNSPTALQRMEMIIPDTKACGIDSYDTASKVILDQ*
Ga0171649_1253464	3300013109	Marine	KTRNSPTALQRMEMVIPDISACGIDSYDTASKVILDQW*
Ga0211709_101745031	3300020369	Marine	TKNSPTALQRMEMAIPDISACGMDSYVTASKVILDQ
Ga0211656_100940542	3300020375	Marine	ATPPNAECAKASPNRENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0211646_100021651	3300020383	Marine	ATPPNAECAKASPNRENFLKTKNRPTALQSREMAIPDISACGIDSYDTASKVILHQ
Ga0211555_103455911	3300020390	Marine	REYLLKTRNSPTALQRMEMIIPDASACGMDSYVTASKVILDQW
Ga0211691_100468951	3300020447	Marine	ATPPNAECAKASPNRENFLKTKNRPTALQSREMAIPDTSACGIDSYDTASKVILHQW
Ga0206684_11359732	3300021068	Seawater	NATPPNAECARASPNRENLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW
Ga0206679_103019742	3300021089	Seawater	NFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0206695_11839172	3300021348	Seawater	MKRPNATPPNAECAKASPNREYFLKTKNNPTALQRMEMIIPDASACGMDSYVTASKVILDQW
Ga0206680_100786533	3300021352	Seawater	PNAECAKASPNRESFRKTKNRPIALQSKEMAIPDINACGIDSYATDSKVIEHQ
Ga0206680_102348201	3300021352	Seawater	ARASPNKEYLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW
Ga0206685_101231991	3300021442	Seawater	ASPNRENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0206681_101228391	3300021443	Seawater	FLKTKNSPTALQRMEMAIPDISACGIDSYVTDSNVILDQ
Ga0226832_101745652	3300021791	Hydrothermal Vent Fluids	PMKRPNATPPNAECARASPNRENLLKTRNSPTALQRMEMIIPDTNACGIDSYDTASKVILDQW
Ga0257022_10847762	3300023481	Marine	PNAECARASPNRENFLKTRNSPTTLQSKEMAIPDISACGIDSYDTASKVILHQW
Ga0208055_10271652	3300025220	Deep Ocean	RENFLRTRNSPMALQRMEMAIPDTSVCGIDSYDTASKVILHQW
Ga0208831_10128453	3300025222	Deep Ocean	KTKNNPTALQSKEMAIPDISACGIDSYATASKVIVHQ
Ga0208180_10634811	3300025277	Deep Ocean	KNSPTALQRMEMITPDTRACGIDSYDTASKVILDQW
Ga0208895_10619263	3300026207	Marine	PNRENFLKTRNSPTALQSSEMAIPDISACGIDSYVTASNVILHQ
Ga0208131_11517531	3300026213	Marine	KTKNSPTALQRMEMAIPDISACGIDSYVTASNVILDQ
Ga0208896_10904212	3300026259	Marine	AECAKASPNRENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0208765_10509631	3300026265	Marine	ENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0257108_11770131	3300028190	Marine	KTRNSPMALQRMEMAIPDTKACGIDSYDTASKVILHQW
Ga0257107_10908002	3300028192	Marine	TPMKSPNATPPNAECAKASPNRESFRKTKNRPIALQSKEMAIPDINACGIDSYATDSKVIGHQ
Ga0257111_10002281	3300028535	Marine	KRPNATPPNAECARASPNRENFLKTRNSPTALQSNEMAIPDTSACGMDSYDTASKVILHQ
Ga0315328_106496902	3300031757	Seawater	ATPPNAECARASPNREYLLKTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW
Ga0315332_106050431	3300031773	Seawater	KTRNSPTALQRMEMIIPDTRACGIDSYDTASKVILDQW
Ga0310122_103303222	3300031800	Marine	ASPNRENFLKTRNSPTTLQSKEMAIPDISACGMDSYDTASKVIVHQ
Ga0310121_101148901	3300031801	Marine	ENFLKTRNSPTTLQSREMAIPDISACGMDSYDTASKVIVHQW
Ga0310121_103258281	3300031801	Marine	RENFLKTRNSPMALQRMEMAIPDISACGIDSYDTASKVILH
Ga0310121_104679112	3300031801	Marine	ARASPNRENFLRTRNRPTALQSREMAIPDTSACGIDSYDTASKVILHQW
Ga0310121_107140182	3300031801	Marine	PSPNKENFLKTRNSPTALQSNEMAIPDISAYGIDSYVTDSKVILHQW
Ga0310123_103930151	3300031802	Marine	ENFLRTRNSPTTLQSREMAIPDISACGIDSYDTASKVIVHQW
Ga0310120_104294841	3300031803	Marine	SPNRENFLKTRNRPTALQSREMAIPDTSVCGIDSYDTASKVILHQW
Ga0315318_103443932	3300031886	Seawater	RPNATPPNAECARASPNRENLLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQW
Ga0315318_105848071	3300031886	Seawater	PNREYLLRTRNSPTALQRMEMIIPDTSACGIDSYDTASKVILDQ
Ga0315318_106368322	3300031886	Seawater	RENLLKTRNSPTALQIREMAIPDITACGIDSYVTDSKVIAHQW
Ga0315324_101068533	3300032019	Seawater	LKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0315329_101828361	3300032048	Seawater	RASPNRENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0315329_101845373	3300032048	Seawater	SPKRENFLKTKNSPTALQRMEMAIPDISACGMDSYVTASKVILDQ
Ga0315305_11511261	3300032127	Marine	PNRENFLKTKNSPMALQRMEMAIPDTSTCGIDSYDTASKVILHQW
Ga0315333_105541552	3300032130	Seawater	KTKNRPIALQSKEMAIPDISACGMDSYVTDSKVILHQW
Ga0315336_12930091	3300032132	Seawater	AKASPNRENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0310345_108219551	3300032278	Seawater	AKASPNRENLLKTRNSPTALQSREMAIPDITACGIDSDVTASKVIAHQW
Ga0310345_112459852	3300032278	Seawater	NFLKTKNSPTALQRMEMAIPDISACGMDSYVTASKVILDQ
Ga0310345_120186291	3300032278	Seawater	LKTKNSPTALQRMEMAIPDISACGIDSYVTASNVILDQ
Ga0315334_100179061	3300032360	Seawater	NATPPNAECAKASPNRENFLKTKNRPIALQSKEMAIPDTSACGIDSYDTASNVILHQW
Ga0315334_101376295	3300032360	Seawater	RASPKRENFLKTKNSPTALQRMEMAIPDISACGIDSYVTASKVILDQ
Ga0315334_105103292	3300032360	Seawater	ECAKASPNREYFLKTKNSPTALQRMEMIIPDTSACGIDSYDTASKVILHQW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041826

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences