Protein Family IF03380

Metagenome Isolate
135 Members
20 Samples
127 Scaffolds
200.66 Avg Length

🧬 Representative Sequence

ID
3300010167|Ga0123353_11135466|Ga0123353_111354662
Length
231 aa
Sequence
LRFSPYFQRFFTLFIEKGLTLQVIENILSRAMDGICGDKSHELAKKAAGGDSAAEEALVSEYAKLVRACARPYFLAGGDGEDLIQEGMLGLLSAIRTFDPDKGAKFSTYAEFCVRRRIYSAIKLASGNKHTPLNSYISLESPQLDETGTQSAYFLRVPEDFVIARERAGEVERLLYGALSRLESGVLELYLEGMSYKDMAVRLGKSDKSVDNAVQRIRKKLSQILTQNSD*

πŸ“Š Sample Types

Isolate 5.9%
Metagenome 94.1%
MAG 0.0%
Metatranscriptome 0.0%
Single Cell 0.0%

πŸ› Taxa Family Distribution

Unclassified 45.0%
Termitidae 45.0%
Termopsidae 10.0%

🌳 Taxonomy

Archaea 1
Bacteria 128
Eukaryota 0
Viruses 0
Unclassified 6

πŸ—‚οΈ Samples

#Sample IDDescriptionTypeTaxa Family
1 2820707375 Unclassified Firmicutes Co191P1bin31 Isolate Unclassified
2 3300038395 Termite gut microbial communities from Labiotermes sp. nest - French Guiana - 19_62_13_hindgut Metagenome Termitidae
3 3300042592 Termite gut microbial communities of Cornitermes pugnax from Petit Saut, French Guiana, France - Co333 Metagenome Termitidae
4 3300042604 Termite gut microbial communities of Neocapritermes taracua from Petit Saut, French Guiana, France - Nct323 Metagenome Termitidae
5 2820442516 Unclassified Firmicutes Lab288P3bin200 Isolate Unclassified
6 2820683647 Unclassified Firmicutes Co191P1bin82 Isolate Unclassified
7 3300042601 Termite gut microbial communities of Hodotermopsis sjoestedti from Tam Dao National Park, Vietnam - Hs463 Metagenome Unclassified
8 3300002450 Cornitermes sp. P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191 P3 Metagenome Termitidae
9 3300010049 Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3 Metagenome Termitidae
10 3300010167 Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3 Metagenome Termitidae
11 3300010882 Labiotermes labralis P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P4 Metagenome Termitidae
12 2820637417 Unclassified Firmicutes Emb289P1bin108 Isolate Unclassified
13 3300042608 Termite gut microbial communities of Palmitermes impostor from Petit Saut, French Guiana, France - Pal332 Metagenome Termitidae
14 2820563109 Unclassified Firmicutes Emb289P3bin58 Isolate Unclassified
15 2820587002 Unclassified Firmicutes Emb289P1bin94 Isolate Unclassified
16 3300042655 Termite gut microbial communities of Porotermes quadricollis from Region del Maule, Estero Los Robles, Chile - Pq454 Metagenome Termopsidae
17 3300042619 Termite gut microbial communities of Porotermes adamsoni from near Lamington National Park, Queensland, Australia - Po218 Metagenome Termopsidae
18 2820566695 Unclassified Firmicutes Emb289P3bin50 Isolate Unclassified
19 2820666966 Unclassified Firmicutes Co191P3bin39 Isolate Unclassified
20 3300009826 Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1 Metagenome Termitidae

πŸ”— Scaffolds

#ScaffoldSampleTaxonomyLength
1 Ga0123356_10060013 3300010049 Bacteria 3549
2 Ga0123356_10253256 3300010049 Bacteria 1840
3 Ga0123353_10021054 3300010167 Bacteria 9770
4 Ga0123353_10068217 3300010167 Bacteria 5711
5 Ga0123353_10109061 3300010167 Bacteria 4460
6 Ga0123353_10110407 3300010167 Bacteria 4431
7 Ga0123353_10137973 3300010167 Bacteria 3910
8 Ga0123353_10351704 3300010167 Bacteria 2220
9 Ga0123353_10414727 3300010167 Bacteria 1998
10 Ga0123353_10447727 3300010167 Bacteria 1902
11 Ga0466721_011345 3300042608 Bacteria 7677
12 Ga0466721_262757 3300042608 Bacteria 3547
13 Ga0123355_10000341 3300009826 Bacteria 60532
14 Ga0123355_10016893 3300009826 Bacteria 11514
15 Ga0123355_10105225 3300009826 Bacteria 4428
16 Ga0123355_11132610 3300009826 Bacteria 809
17 Ga0123356_10000192 3300010049 Bacteria 70579
18 Ga0123356_10000359 3300010049 Bacteria 51770
19 Ga0123356_10059739 3300010049 Bacteria 3557
20 Ga0123356_10084060 3300010049 Bacteria 3016
21 Ga0123356_10203748 3300010049 Bacteria 2021
22 Ga0123356_10327373 3300010049 Bacteria 1648
23 Ga0123356_10332154 3300010049 Bacteria 1637
24 Ga0123356_10383295 3300010049 Bacteria 1539
25 Ga0123356_10454538 3300010049 Bacteria 1429
26 Ga0123356_10579001 3300010049 Bacteria 1286
27 Ga0123356_11145767 3300010049 Bacteria 945
28 Ga0123353_10045998 3300010167 Bacteria 6930
29 Ga0123353_10457626 3300010167 Bacteria 1876
30 Ga0123353_10711298 3300010167 Bacteria 1407
31 Ga0123354_10429222 3300010882 Bacteria 1090
32 Ga0466693_256048 3300042592 Bacteria 1000
33 Ga0466721_121891 3300042608 Bacteria 5168
34 Ga0123356_10000242 3300010049 Bacteria 62970
35 Ga0123356_10000703 3300010049 Bacteria 36998
36 Ga0123356_10014265 3300010049 Bacteria 7644
37 Ga0123356_10051405 3300010049 Bacteria 3833
38 Ga0123356_10127619 3300010049 Bacteria 2486
39 Ga0123356_10302876 3300010049 Bacteria 1704
40 Ga0123356_10714099 3300010049 Bacteria 1172
41 Ga0123353_10052866 3300010167 Bacteria 6490
42 Ga0123353_10183790 3300010167 Bacteria 3307
43 Ga0123353_10597635 3300010167 Bacteria 1578
44 Ga0123353_11629689 3300010167 Unclassified 813
45 Ga0123354_10401683 3300010882 Bacteria 1159
46 Ga0466693_305093 3300042592 Bacteria 1518
47 Ga0466726_072344 3300042619 Bacteria 1879
48 Ga0123355_10205325 3300009826 Bacteria 2868
49 Ga0123355_10618721 3300009826 Unclassified 1277
50 Ga0123356_10010502 3300010049 Unclassified 9085
51 Ga0123356_10038527 3300010049 Bacteria 4454
52 Ga0123356_10068632 3300010049 Bacteria 3322
53 Ga0123356_10258735 3300010049 Bacteria 1823
54 Ga0123356_10481018 3300010049 Bacteria 1395
55 Ga0123356_11059656 3300010049 Bacteria 980
56 Ga0123353_10075253 3300010167 Bacteria 5426
57 Ga0123353_10387676 3300010167 Bacteria 2086
58 Ga0123353_10399156 3300010167 Bacteria 2047
59 Ga0123353_10550113 3300010167 Bacteria 1665
60 JGI24695J34938_10000740 3300002450 Bacteria 30653
61 JGI24695J34938_10047812 3300002450 Bacteria 1887
62 Ga0466693_110374 3300042592 Bacteria 1633
63 Ga0466707_289981 3300042601 Bacteria 26952
64 Ga0466727_318194 3300042655 Bacteria 2675
65 Ga0123355_10030491 3300009826 Bacteria 8739
66 Ga0123356_10029730 3300010049 Bacteria 5115
67 Ga0123356_10031761 3300010049 Bacteria 4942
68 Ga0123356_10295205 3300010049 Bacteria 1723
69 Ga0123353_10082300 3300010167 Unclassified 5177
70 Ga0123353_11222185 3300010167 Bacteria 984
71 Ga0123353_11508346 3300010167 Unclassified 856
72 JGI24695J34938_10119837 3300002450 Bacteria 1071
73 Ga0415639_004187 3300038395 Bacteria 32158
74 Ga0466717_045777 3300042604 Bacteria 2538
75 Ga0123355_10000139 3300009826 Bacteria 86692
76 Ga0123355_10238902 3300009826 Bacteria 2578
77 Ga0123356_10000010 3300010049 Bacteria 220063
78 Ga0123356_10002684 3300010049 Bacteria 18884
79 Ga0123356_10020759 3300010049 Bacteria 6212
80 Ga0123356_10130654 3300010049 Bacteria 2460
81 Ga0123356_10139787 3300010049 Bacteria 2387
82 Ga0123356_10200334 3300010049 Bacteria 2035
83 Ga0123356_10365774 3300010049 Bacteria 1571
84 Ga0123356_10714201 3300010049 Bacteria 1172
85 Ga0123356_11208033 3300010049 Bacteria 922
86 Ga0123353_10001991 3300010167 Bacteria 25237
87 Ga0123353_10013304 3300010167 Bacteria 11779
88 Ga0123353_10236139 3300010167 Bacteria 2845
89 Ga0123353_10562505 3300010167 Bacteria 1641
90 Ga0123353_10566705 3300010167 Bacteria 1633
91 Ga0123353_10638869 3300010167 Bacteria 1510
92 Ga0123353_10707338 3300010167 Bacteria 1412
93 Ga0123354_10130235 3300010882 Bacteria 3183
94 JGI24695J34938_10045742 3300002450 Bacteria 1940
95 Ga0466693_258695 3300042592 Bacteria 2228
96 Ga0123355_10384015 3300009826 Unclassified 1827
97 Ga0123356_10001466 3300010049 Bacteria 25999
98 Ga0123356_10027506 3300010049 Bacteria 5328
99 Ga0123356_10034630 3300010049 Bacteria 4719
100 Ga0123356_10067545 3300010049 Bacteria 3348
101 Ga0123356_10273205 3300010049 Bacteria 1781
102 Ga0123356_10616503 3300010049 Bacteria 1250
103 Ga0123356_10854681 3300010049 Bacteria 1081
104 Ga0123353_10006980 3300010167 Bacteria 15181
105 Ga0123353_10093761 3300010167 Bacteria 4838
106 Ga0123353_10203190 3300010167 Bacteria 3115
107 Ga0123353_10297237 3300010167 Bacteria 2468
108 Ga0123353_10364280 3300010167 Bacteria 2171
109 Ga0123353_10378671 3300010167 Bacteria 2118
110 Ga0123353_10431275 3300010167 Bacteria 1949
111 Ga0123353_10470832 3300010167 Bacteria 1842
112 Ga0123353_10480724 3300010167 Bacteria 1817
113 Ga0123353_10563824 3300010167 Bacteria 1639
114 Ga0123353_10627773 3300010167 Bacteria 1528
115 Ga0123353_10860347 3300010167 Archaea 1241
116 Ga0123353_11135466 3300010167 Bacteria 1033
117 Ga0123354_10157535 3300010882 Bacteria 2715
118 Ga0415639_019235 3300038395 Bacteria 6517
119 Ga0123355_10009220 3300009826 Bacteria 14978
120 Ga0123355_11011121 3300009826 Bacteria 881
121 Ga0123356_10004033 3300010049 Bacteria 15248
122 Ga0123356_10008613 3300010049 Bacteria 10119
123 Ga0123356_11801476 3300010049 Bacteria 761
124 Ga0123353_10049340 3300010167 Bacteria 6705
125 Ga0123353_10567556 3300010167 Bacteria 1632
126 Ga0123353_10987452 3300010167 Bacteria 1133
127 Ga0123353_11262658 3300010167 Bacteria 963

🧩 MSA Aligner

πŸ”¬ Functional Annotation

PFAM IDNameDescriptionStartEndAccuracy
PF04542 Sigma70_r2 Sigma-70 region 2 58 123 0.96
PF08281 Sigma70_r4_2 Sigma-70, region 4 179 221 0.92

πŸ—ΊοΈ Geographic Distribution

Some samples may be missing due to lack of coordinate data.