Sample 3300031809

3300031809: Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA5 (Metagenome Metatranscriptome) (v2)

Overview

Basic Information
IMG/M Taxon OID	3300031809 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0290757 \| Ga0316048
Sample Name	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA5 (Metagenome Metatranscriptome) (v2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	18543492
Sequencing Scaffolds	65
Novel Protein Genes	67
Associated Families	61

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	2
All Organisms → Viruses → unclassified viruses → Bufivirus UC1	1
Not Available	51
All Organisms → cellular organisms → Bacteria → Acidobacteria	4
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → litter layer → plant litter
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Czech Republic: South Bohemian Region
Coordinates	Lat. (^o)	49.0448	Long. (^o)	13.618	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001748	Metagenome / Metatranscriptome	642	Y
F001758	Metagenome / Metatranscriptome	640	Y
F001867	Metagenome / Metatranscriptome	624	Y
F002852	Metagenome / Metatranscriptome	526	Y
F002988	Metagenome / Metatranscriptome	515	Y
F003050	Metagenome / Metatranscriptome	510	Y
F003556	Metagenome / Metatranscriptome	479	Y
F004183	Metagenome / Metatranscriptome	449	Y
F005057	Metagenome / Metatranscriptome	413	Y
F005065	Metagenome / Metatranscriptome	413	Y
F006257	Metagenome / Metatranscriptome	377	Y
F006591	Metagenome / Metatranscriptome	369	Y
F007311	Metagenome / Metatranscriptome	353	Y
F008172	Metagenome / Metatranscriptome	337	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009043	Metagenome / Metatranscriptome	324	Y
F009335	Metagenome / Metatranscriptome	319	Y
F009606	Metagenome / Metatranscriptome	315	Y
F010442	Metagenome / Metatranscriptome	303	Y
F011567	Metagenome / Metatranscriptome	289	Y
F011845	Metagenome / Metatranscriptome	286	Y
F012024	Metagenome / Metatranscriptome	284	Y
F012888	Metagenome / Metatranscriptome	276	Y
F014401	Metagenome / Metatranscriptome	263	Y
F016972	Metagenome / Metatranscriptome	243	Y
F017080	Metagenome / Metatranscriptome	242	N
F018222	Metagenome / Metatranscriptome	236	Y
F018933	Metagenome / Metatranscriptome	232	N
F021676	Metagenome / Metatranscriptome	218	Y
F022475	Metagenome / Metatranscriptome	214	Y
F024793	Metagenome / Metatranscriptome	204	Y
F025284	Metagenome / Metatranscriptome	202	Y
F026569	Metagenome / Metatranscriptome	197	Y
F028981	Metagenome / Metatranscriptome	189	Y
F029355	Metagenome / Metatranscriptome	188	Y
F029445	Metagenome / Metatranscriptome	188	Y
F029498	Metagenome / Metatranscriptome	188	Y
F030305	Metagenome / Metatranscriptome	185	N
F030619	Metagenome / Metatranscriptome	184	Y
F030679	Metagenome / Metatranscriptome	184	Y
F031388	Metagenome / Metatranscriptome	182	Y
F033813	Metagenome / Metatranscriptome	176	Y
F038685	Metagenome / Metatranscriptome	165	Y
F039163	Metagenome / Metatranscriptome	164	Y
F041528	Metagenome / Metatranscriptome	159	Y
F047359	Metagenome / Metatranscriptome	150	Y
F049779	Metagenome / Metatranscriptome	146	Y
F058583	Metagenome / Metatranscriptome	134	N
F060406	Metagenome / Metatranscriptome	133	N
F062326	Metagenome / Metatranscriptome	130	Y
F062493	Metagenome / Metatranscriptome	130	Y
F063428	Metagenome / Metatranscriptome	129	Y
F065193	Metagenome / Metatranscriptome	128	N
F071421	Metagenome / Metatranscriptome	122	N
F074242	Metagenome / Metatranscriptome	119	N
F081387	Metagenome / Metatranscriptome	114	Y
F089214	Metagenome / Metatranscriptome	109	Y
F089618	Metagenome / Metatranscriptome	108	N
F092084	Metagenome / Metatranscriptome	107	N
F092547	Metagenome / Metatranscriptome	107	Y
F102610	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0316048_100180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2170	Open in IMG/M
Ga0316048_100230	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	1989	Open in IMG/M
Ga0316048_100372	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	1701	Open in IMG/M
Ga0316048_100385	All Organisms → Viruses → unclassified viruses → Bufivirus UC1	1687	Open in IMG/M
Ga0316048_100853	Not Available	1225	Open in IMG/M
Ga0316048_100948	Not Available	1180	Open in IMG/M
Ga0316048_101052	Not Available	1130	Open in IMG/M
Ga0316048_101145	Not Available	1102	Open in IMG/M
Ga0316048_101356	Not Available	1040	Open in IMG/M
Ga0316048_101870	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
Ga0316048_101959	Not Available	916	Open in IMG/M
Ga0316048_101991	Not Available	909	Open in IMG/M
Ga0316048_102279	Not Available	861	Open in IMG/M
Ga0316048_102298	Not Available	859	Open in IMG/M
Ga0316048_102331	Not Available	854	Open in IMG/M
Ga0316048_102405	Not Available	846	Open in IMG/M
Ga0316048_102656	Not Available	815	Open in IMG/M
Ga0316048_102735	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
Ga0316048_102769	Not Available	804	Open in IMG/M
Ga0316048_102912	Not Available	791	Open in IMG/M
Ga0316048_102913	Not Available	791	Open in IMG/M
Ga0316048_102947	Not Available	787	Open in IMG/M
Ga0316048_103374	Not Available	753	Open in IMG/M
Ga0316048_103454	Not Available	747	Open in IMG/M
Ga0316048_103675	Not Available	730	Open in IMG/M
Ga0316048_103726	Not Available	727	Open in IMG/M
Ga0316048_103779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
Ga0316048_103912	Not Available	714	Open in IMG/M
Ga0316048_104104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
Ga0316048_104125	Not Available	699	Open in IMG/M
Ga0316048_104250	Not Available	693	Open in IMG/M
Ga0316048_104311	Not Available	689	Open in IMG/M
Ga0316048_104396	Not Available	684	Open in IMG/M
Ga0316048_104654	Not Available	671	Open in IMG/M
Ga0316048_104914	Not Available	656	Open in IMG/M
Ga0316048_104967	Not Available	653	Open in IMG/M
Ga0316048_105727	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
Ga0316048_106060	Not Available	607	Open in IMG/M
Ga0316048_106147	Not Available	605	Open in IMG/M
Ga0316048_106250	Not Available	600	Open in IMG/M
Ga0316048_106671	Not Available	587	Open in IMG/M
Ga0316048_106674	Not Available	587	Open in IMG/M
Ga0316048_106685	Not Available	587	Open in IMG/M
Ga0316048_106707	Not Available	586	Open in IMG/M
Ga0316048_106896	Not Available	581	Open in IMG/M
Ga0316048_107145	Not Available	575	Open in IMG/M
Ga0316048_107201	Not Available	573	Open in IMG/M
Ga0316048_107717	Not Available	559	Open in IMG/M
Ga0316048_107818	Not Available	557	Open in IMG/M
Ga0316048_107836	Not Available	556	Open in IMG/M
Ga0316048_108330	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
Ga0316048_108577	Not Available	538	Open in IMG/M
Ga0316048_108615	Not Available	537	Open in IMG/M
Ga0316048_108709	Not Available	535	Open in IMG/M
Ga0316048_108744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
Ga0316048_108905	Not Available	531	Open in IMG/M
Ga0316048_109038	Not Available	527	Open in IMG/M
Ga0316048_109483	Not Available	519	Open in IMG/M
Ga0316048_109509	Not Available	519	Open in IMG/M
Ga0316048_109634	Not Available	516	Open in IMG/M
Ga0316048_109656	Not Available	516	Open in IMG/M
Ga0316048_109861	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	512	Open in IMG/M
Ga0316048_110367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
Ga0316048_110397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
Ga0316048_110404	Not Available	503	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0316048_100180	Ga0316048_1001803	F031388	VIRSLTLEIETGGGEREEIGRIRKVSRKAAESVERFDPEGYKSPGGEWRQRKQLSGPARRAATGLKRRSCPQLGQTSEGRGAEGGPGGEPSWEVAKWQVRTVDPGMEASEREQPLRARERPLRATGSVEERDAVW
Ga0316048_100230	Ga0316048_1002301	F030619	LERNTYKRLTSLVKSHPTEQSSAPSRKRVHAHRHRGGDMSPLQQVWTACWSGLVLSGWDSMRVAWFLHQWACRSAPRGVAYQVDCMKKLCHNIRGSSLHPKRWKIQPCGIRKDVVDCLCNLAVREPKNGFAFSRLSRSLPEPPARDAVRHLQSAAELASAPFPTSAAALESLRSFVSLSKRARRNPRTPRRLPSSNSSCLEWPATRGGIDGYLEHLGHELEVRGATQAEFARFAGDSLGAFCLSRARIVLRPCMGVSEDMRESYRCAGLLALRAEEKPFAMKATALRTPGYKVRVVGVPDARTFVEGSWIRESSRLLPPGHWTIDSESREIPNGLHYRRGHTFRSLDLSKATDGLSHAAIEVVVEALVRRGAIRNADHLMARRSLGLVGNTTWSFPDPIGEVVFSRGSPMGTPLSFIVLSWVSAWAVGKFSRSLTHGDDAVGRHRIGSDALDIYASRVASVGAQLNKGKTFRADHSWTACEILALPREDCEDRMTLFVPPSIPPPGLRAPVEADPRLENLWLRRMERVMKSRFPWVKCDPRLHIPVEAGGLGYTGRGLAVGRSLRSRLGALVSRGPNAEIGAALIGKKPFREVGLYPHPLVLIPKPKAYWKAAKAVDQDLAPLGADLVSVPLESFESFKCQCIESELRLVEGEKFKRKRVAGR
Ga0316048_100372	Ga0316048_1003721	F030619	GNGVLRHPRRLPSSSSSCLEWPATRGGIDGYLEHLGHMCEEAGATQSSFHAYAGDSLGAFCLRKASVVLRPCAGVAADLRESYRCAGLLYLRSQGKPFGMKATALRTPGYKVRVVGVPDCLTFVEGSWVRSSLRWLAPGHWRIDGESRKIPGGLHYRAGRRFASLDLSKATDGLSHPAVRVVIEGLALRGLIRLADLAMSMRSLGLERGATWSFPDLGDKIGEGSFLRGSPMGTPLSFVVLSWVNAWATSTFSRALTHGDDAVGRYTPGSLELDLYASRVASVGAALNREKTFKADHAWTACEIFALPRSHGEDKMTLFYPPSIPPPTLRAPVEADQRLENLWLRRMERVMKSRFPWIVKDPRLHLPVQVGGLGYTGRGLAVGVSVRRRLGALVSRGPSAVIAADLIGKKPFREVGLYPRPLCRVVRPGSYWKAVRVTEQWFQAGGDTHVPLESLLSFKSCLIEDEVRLLEGDKFKRKRVAGRPDRTRAGAVFRRLGVAPCRPLTRRWGCSALIRWASLSRESEVTVPEDIASEIRERIPDPT
Ga0316048_100385	Ga0316048_1003852	F092084	VKTVIVPKGQNEYGRDVVRFTADYAASDLFEQCIGCYPLVQHDLKDSFLEKESPSPPLMIDPDVMTDEEVERWMAKYVRGNTNAFVQNAGQNVPGGRN
Ga0316048_100853	Ga0316048_1008531	F081387	MGAEKHPTVGSSGESWSMNKSLNQWLAEMNDLENQEGYDSCKVCAKVKIMILNLRRTPGQQRASSCGKTLTEKRYSSLLGVKGGQIV
Ga0316048_100948	Ga0316048_1009482	F029498	MNCVELQASLAEMEDGSSAQHTSQQRAHLKTCPECSSLILELNLIAASAIELRAADEPSP
Ga0316048_101052	Ga0316048_1010521	F025284	LSSMNQTRRKRPQGPSRKTRGKNTGNRGRDNQVIPHPPQLPSYGITRDVRLRFQATAAAQQAFTFQNLLDCILIATGATAVFDLFEGVRLNSIEMWVIAALGTPATLTCIFDGLTLGAMGDQKTHTDTSMGVEPAHVKARPDRLTQAGQFQPSSAAVAFRLDTPAGTVIDVSMSFRQPMLSQAVAAQNVAVGATTGAVYYRGLDGKTTALTNYPVIGADSVI
Ga0316048_101145	Ga0316048_1011451	F010442	MKLFAFLLIAAFQASNFAFADDSSSGMRQCPGGYAHGTQMDIGRYWYECRDSQVIPKGCLTEDNKRVSVDETFDTSKYRMQCVLDKDGFLSVVYKACMLQGSSHDVGSQWDDGNAFFTCVKEGDNVRVITLGCVDQGKPMKLDDRVAKGDFIFQCKKATDGTPTMNKVGCVFDGKKFNIGETYEGPKFWYTCTDSGSKIVGCMYESHRLQDGDHFTKDDIMSSCKVNGDNTDFVPFSCLQKEESGASIERRVGCSWVEGRGSEAYEYTCKVDSSKKLSKLQTQCVYRAPQGTFKLQPGCVTLADTIAVGCLLDTSSGKLRIETYSGDKID
Ga0316048_101356	Ga0316048_1013561	F029445	FWFTRASIVTAEMSRTTKPMRKQKGQRQRGVTAFSIEIAGDQIVKRMSYPSYALSTGAGTAIAVYPIGSGTVQSAPATEWASFAARYQQYRVRAIRVRGKAVNPVQTATLTHGVLFRGDYIGAAIPASAAQVLSDENVQECTTCKDFSDVVTWQKNPNAKLWNPTTSPIPVANTFAWAAASNATPVLTTATTYYALVTEWEVEFRGSQ
Ga0316048_101870	Ga0316048_1018701	F005065	MMDANHSSERLNSMRLEISDLRVTTARYWSKSQHTPLEKSAFALRKGRLLEIKREVSDMLKRCA
Ga0316048_101870	Ga0316048_1018702	F014401	MNTGRVWPQLYKAALFELDANKVSDRIAEAETALVIRAHELFDSAGDNIEEEQAVDDAMYALHALRSALKCRADSKNTSNELAA
Ga0316048_101959	Ga0316048_1019591	F089618	MEFPEIENARDRSPWRLNLDGLVVQPVLRPSATPAANLQLSLPLLPLAAPVSNLRLASAALPPARPRANPPARIGVFSPGSTGGKHPARTVCYALPIDWLLTFQLALASGLQLGLRLLPTHIWCRPSARQVLRLPVLTGFRRNHRLAPVAAAAPTRAGCCPLLPHRPRTSDSHRLLFRRLCRSQLTQLALCAPTSGWAFDAPLASTEPCIAS
Ga0316048_101991	Ga0316048_1019911	F009606	MSKEQVSKNNDNGRGPNVVRTKAKPKVNPVTGANFEYVSEPRIGDSFVVVMGGPGGVNSFTFHHPIGVTEVDDEDWVCTPTGDIPSLLARRDDPDEADRKARRDKHRLDLVVVANLLEKADDEGLLVYPGTDISRQDALAAARAAAKDAVKAEKGKVPPDLYIRFLPQPVQEAETLVRKKLASRETIQKAETKFPSSGFRTRGGPLADRDQVSVDYLSGLSRPQALDAVTKRVFGLDDEE
Ga0316048_102279	Ga0316048_1022792	F049779	GRDVVTQQKDQFRAAYEAGRQAYQEATTEAGGAPKNL
Ga0316048_102298	Ga0316048_1022981	F089214	MVKSPLARILLCLAVLALIGVTALALGTKPNYILTNNGRNAIAAKGPSVVTPRSPNSDAGLKTIAGNLSTYKYGTYFCCFGNTIAQESANFPFTTWVAIGFTPAASVTVNRIEASVGAFSSGDEGTGIELSLREDSNGVPGKIIKNFSIKTPPIYGSCCTLDVGNDSAGIALTGGTQYWIAVTTSSKTTFAGGWAFNSTDMRGGYPIASYCKGPSTYCGTTD
Ga0316048_102331	Ga0316048_1023311	F007311	ACGLSAKYVPSCWPPHFAVAPVMDCSMLDAWHSLLHADCSALHFVCPVQTTDLTRCSTLSALRLLRIAPRSTPCARAGHGSLRATDCSVVQHLELCPACGLLRHRDLAFHAALGLLLVRRFPLSVAHGLLRARRLTLHAGLRIAPYADILRPRAVYGLLHFRH
Ga0316048_102405	Ga0316048_1024052	F006591	WVLATHSFPFAGPWALTPSQVGGRLLDASSRGNAELSVSWQDRRPDCSRRLLGEAFQHGSPIPCRGSAPHMVVRLLRHSLVTAVLQVGPRELPPERWPEGTGLASYPSIDI
Ga0316048_102656	Ga0316048_1026561	F030305	SGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGYPQIARLPRLSTSCLAVDERPGCPDRSIIWLYRRRRFRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVALRVSPNLPPSDICRFRSSGLPQIGFLGGSMMNPRFARTLHPRSIQLTSLQVAPKLPLPAAPRMNLQTHSGLAFLPTLRCSLNLYPLFACRRTGLLRTTINQFPIACRAGLQSVSLQGHQLRKRQ
Ga0316048_102735	Ga0316048_1027351	F018222	MHFEPRKTWQYFAQAVIHEDDPEKLTDLMGQLYRTLDE
Ga0316048_102769	Ga0316048_1027692	F021676	MPDGPATRPKTPLAVENGVGRPAAPEKGAPNAGSGKRDWRTP
Ga0316048_102912	Ga0316048_1029121	F025284	RDVRLRFQATAAALTNITFQNLLDTVLVATSATTAADLFEAVRVNSVELWAIAALGTPATVILAFDGMTVGAAGDQKTHTDTSMGVEPAHVRAQPDKLTQAGQFQTSSANVAFILDVPAGTVIDVSMTLRQPVFGTVVASQNVLVGATAGAVVYRGLDGKTTALTNFPVLGAASVA
Ga0316048_102913	Ga0316048_1029131	F029355	LSVCSPAAGLAATASTLSDAPQLIFPKLNRSLVTAFPSPATAPAFTDSIPGSKVPACYFAVSLAGFDARSAIRLHCRNWFAPIPAASTLQARCISARKLIRPLSLSPLPSGSFSSLRIKAFNKRCCRPVRLPNLPDLRSLPAAGSITRLSCGSSSAVRYVSGGLLFLKP
Ga0316048_102947	Ga0316048_1029471	F047359	MLSRSIHTYAAPSDPLAGTVRFHCSAAYTPCLRCALPPRRPTTGSVLSLRILSQHVALCDSGESGGCVHPVPSPPTLAFVPLVQTRHSHPSRKSVSRGGHLSELHYGSLALQPADLFTLLTDRTGFTPSPRGFLLPGFRRVGHPPRRRLLLRWQLGNFHRRDLHPQEWQLASLHTKVLP
Ga0316048_103374	Ga0316048_1033741	F025284	ASLAFTFQNLLDTVLVAASSTTAADLFEAVRLNSLEIWAIAAVGTPATITAIFDGTVVGAQGDQKTHTDTSMGVQPAHVKARPDPLTQTGQFQVSNANTAFRLDVPAGAVIDVSMSLRQPVLGQVVASQNGLVGATAGTVYYRGLDGKTTALTNFPVVGADSVI
Ga0316048_103454	Ga0316048_1034541	F009335	MVKTRIRNHKRVFTWFASRRPQTPAEASLEASLKIQRPQGAGRPCYEAGNSACRGEWRREAG
Ga0316048_103675	Ga0316048_1036751	F033813	LHSLKELGAGGGRKKIAGIPRIIPGDWGKAESGWLAQPL
Ga0316048_103726	Ga0316048_1037261	F063428	IIPGDRGKVGLGLARLLLNQPKGGTAEAKFTGSSGAFARAKCE
Ga0316048_103779	Ga0316048_1037792	F014401	MTALANCVPVREYKRVWPQVYRAALFELDADKVPDRIAEAETALVIRARELFHSAGDNIEEEQAVDDAMYALHALRSALKCWPNARNVSQDLAA
Ga0316048_103912	Ga0316048_1039121	F016972	VRLNPLTDAIPVVNLYLTINDTEKVSFGAKTSRYGPYGLGYRRATRTFTKXSKTENT
Ga0316048_104104	Ga0316048_1041041	F065193	LGGITMRILLVMSSFLTFSAISAYSQESQDIYVHKAYNGWGYYNPNYHDVVGTDKGLYGHVIGNGSGTYDNEESYIWNNLINMNPAGLVYYWDHGAGHRYSNWSYIPNYNSSYAKCNLNYLAYGQGSSC
Ga0316048_104125	Ga0316048_1041251	F060406	LGELNSTTGCRVLRLPQRPTSRFRLRLRPLAALAPNLRLASPASHSSSTGGRLRRLGSTFCRSARTVANLRLSPALRASVRPLADLPTFVGVLPQARPRTNFRFAPDFDPSTRLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGELPTRIGCSSSGFTGFDSLGLRLVVLLPAGLSIHP
Ga0316048_104250	Ga0316048_1042502	F018933	RSRITPRSTLDSLYRPRIAPRSVLIDRCCPPIARRSTLNARRRSQIAPRSTLCARAGHGLLHVQHLESSPRVQIAPYSTLCAPRRSQIAPRSTLPARYRSRIAPLSAIDAPCRSTDISVRLHFAPCAVHGLLRAQHFKLRTAHRLLCVRRLHFVPIADCSAFLTPCLVSLADCSVLNT
Ga0316048_104311	Ga0316048_1043111	F006257	QAIQFPALFSAGMHGTEHCIGKSCVIRRSAPLSSISLPQDRCFPAHRSLSSQRSRSLVTAFPSPATAAPFQKPPFQGQWSRPATSRPPDSICRPVRLRLHYLRWFAPVEGSFIASARCGFLAPVRPAASSISTPLWESCLPRDRSVRQIPPPCGSPSGFARFPFAPRRRSIARLAADHRSRTATFPEAAVCLRSNLKLRYSKGVQCITCIN
Ga0316048_104396	Ga0316048_1043962	F074242	VLGGGGRRSSLQPPAFIPTLSLSHKFRYENGGNSGTFNITRGNLLNQILIATSTTTTVRIIEAIRLKSVEVWGSPPALGSAPTDIQVEWLGENSPSTVISDTSMGIRPSHVATSPPPSSSNKWWSISGTSEADVLFSITLPAESVIDVNCELRLVEKETPTAGDAAVAATLGQVYGDYLDGIASGKLVPSGFTVLP
Ga0316048_104654	Ga0316048_1046541	F008172	VAPGQRTAKSGGRPGAQRQRRGYAITNVCLPGLPAGDRNRQPKRAKRPHSKFSDRKALDGPAMRPATPLAVENGVGKLAANVRQMPARERESGELP
Ga0316048_104914	Ga0316048_1049141	F074242	VLGGGGGRSALQPPPFVPTMGLSHKFRFTSGGQSGTFSITRGKLLNLVVLATSTTATVRLFEAVRLKNVEVWANPSALGSAPVIAAIEWLGENSPSTVISDTSMGVRPAHVSSAPPPSASNRWWCISGTSESDVMFSLTVPTESVIDVTLELRLVEQEAPTAGEVAVAATAG
Ga0316048_104967	Ga0316048_1049671	F071421	YKEGAPPKGTQPGTAPGTQGSTEAAQQAIQLPPLSFPRDGPPQFHSSLTATMVCGMCLSGGGNLSPITPKSGYRFGPTPRNLAKVVAIGQPPTDPIAARWENQRDFS
Ga0316048_105727	Ga0316048_1057272	F002852	MQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAESVLKQFEQSQTSEDRHIGWRYFLEKTDLKAGMDPAEATALRQSRLEIREAE
Ga0316048_106029	Ga0316048_1060291	F041528	AAAATPAIGVALSEGTIVVNDAQTPGNATVFNGTTLQTQRTSSQVRLKDGAQVRFDLDSRGTLFSDHVDLQQGSAKISDYSANALGLSVRASGDSSANVTMKGKVIEVAALTGNVQVFNAAGMNVANLLPGRALDLRPADAGARAPSLLTGCPVKSGNNFMLTDEASNVTAQLRGGDLKVGTRVHVTGDLVPNAKAVSPATQV
Ga0316048_106060	Ga0316048_1060601	F002988	LRVRIADKIARIDQRKLNGEPWKEIDQSTLPIPEQWFSSPIRTSPLKVALLAFERENPGNMTLRIALRS
Ga0316048_106147	Ga0316048_1061471	F026569	MHGTEHRVPERRALRLSAPRKPVYPASASSLPSAPQPLILSKTGPFARNGLSLTREGLRLREFRPGVEGPGLPLRSLACRSSCPFGFSAPPPVAGSPQRPAASTPQARCIPYRPALPAVLPACAPLWEFSLPWDQRTGKLRNRSVRLPELPDLVRSPQPFHLKIRLRINVPDPLHFRRLAVPQTSWNP
Ga0316048_106250	Ga0316048_1062501	F017080	SVVQPVLRPSATPEANLQLSLAIASSGCAGVESPTCVGESTSGSTVGQPSGSDRCFVLRLDRWHALGFRRVLCASVRPGADLPTCVGVHPPARPATNCRLTSGVHPSARLVSNLRFSPAVVTAFSLRLLLLRLSSLRWLSPVCHTGCELPPRIGCYGLRLYRFRPTRLASNVSTSGWAFDAPLALTEPCIDS
Ga0316048_106671	Ga0316048_1066711	F011845	PGFTVRFSDPSACGRSLCSQMPGLNRSSLAITAFQQETGHSFKRVYAARPHRTQHPAGTGISIRPFARSQRRFRHHCEVNVPDLYLRFHIRNPRESVRLPAPSLRSVSRPNRGDINARNPFPTLISDAPDLSPISTPLEVFFRKPSGSKRSTGSISGSPPYPTLDCSVRPAASSFDSASDCSGVTQVETRFVRLD
Ga0316048_106674	Ga0316048_1066742	F024793	VNSASPELTLRFQRSRINQPDPAFPRSPGIIEKLDNLNFIRCHP
Ga0316048_106685	Ga0316048_1066851	F004183	MERLRGANEDRALPEGGPNGCEASRGFDPEGAKTPEGELRQAAQSAKQAGKECNGFETWMQPEAGANQPLAAESKSRTGRKTGKRVSEVAGRDL
Ga0316048_106707	Ga0316048_1067071	F011567	LRLVPVTGSTLLAYIFEAILKSTPQPVRFQTPVPVRPFYCLARYDPHLNPVAGVKLPDSPPVFEPPLPSRTFLSLGIKALSPTPFGNACFYELPDLPSLPASRKCLTIAARWINVPDPLLPVRLTV
Ga0316048_106896	Ga0316048_1068961	F009043	VPSDLISQPNPPPACAALSFAIRVARCCPFRSPPPSFESSGSMRPGSPAGFPAWNRYLEAAFHSPKTTVRLRTAISRSKFPTYSFDTLPNVHPARSVSDSPTRSGSPRYAQDPHQKPVARLPSGSPNRSSDLLSPLGPFGPFRIKAFNPIPGQEAHLPNTPDHLSLPDFGSILLVPKPDHCSRLASRSAACCS
Ga0316048_107145	Ga0316048_1071451	F009017	PIPSLAHRGHASALSSAFRNAERLACLLPDYRFAGHRFNAFRRAAACLPKLNRSPVTAFPSPATAFAFANSIPRSMVPACYFAVSSTGWNTRSAIQLRRRNWLAPIPATSSLQARCILASQLMRLLSLSPLPSGTFTSLGIEAFNRFRRLTAHLPIPPDCLSLPAAVLFLVFGCGSPFLARYVSGDLLFLK
Ga0316048_107201	Ga0316048_1072011	F062493	VCRKALIPGQRNRPRGSGTATHPELLNAVFYAEHAGREQGWELDH
Ga0316048_107717	Ga0316048_1077171	F062326	RVHGTIERTTGMLGVRSATGRSGFVVFRSPATPFGTRRVSAKNASSRLASRRSRKLGTAFRSPVTMLSPPLRGQRSRPAPSLPRRCFFAYPLDQKLLRSVRFRSRNRANSSPSTRCPRRSPALLRCHPVSTPLRAFPPSGSKRSTGFIATSSPRLTPDLSFAPRGAIFRFRPGSTLETRFVLLGY
Ga0316048_107818	Ga0316048_1078181	F003050	MESAKAEIVAGEEKAVTSERSSFGMISCGAPESVEAVIAKAVAGEQTGKAYGAPKRGAQYGCMPVVS
Ga0316048_107836	Ga0316048_1078361	F028981	KMQLLKYIFLIFLLFALSLCQTPCYNNGNCFGATSTRCDITKVQLEAGTTGQCTAGFTEGQTCTNNNDCNAADNLICTKGNCVFGTQKGFNCSDNFFCNSQLYSRCVNGKCVEGGATGAICQVNTDCSQISSSKWCLGNTCRVQSNFPCDNTNQCYGNNWICKQVGNEAIKACTYSP
Ga0316048_108330	Ga0316048_1083302	F001867	TTNSPAQLWFERYSKYHCDDCGSEIGFLSRRRTLTERYMLPVFLLRPVRCAECFRRDYRLVFVPVRERLSEASPKPPVSVGGSESTRHVA
Ga0316048_108577	Ga0316048_1085771	F058583	GMLGVRSAANLSSSLRIAARRRCFSTCAGSVPQSIVKFKSLRRSRKLETAFHSPATTFARHCEVNVPDLPLRLRAENLTEPVRSRTPPLRSVFEAEPGRILRPLPVALHRSPALLKFHSISTPLQALQSPPDQSVQPSSSRGSLPDETPACPLLPSALSFRISPRITALDALCSARLIV
Ga0316048_108615	Ga0316048_1086151	F030679	MFIAESPLPSSEPKTLKRPSNFRSPSGLSSFQIVALSQRLNLRSLPLRTARFPFAPRKRQLLVITKA
Ga0316048_108709	Ga0316048_1087092	F092547	LNAHSIASTTPLSFGLHPSTRETSASTPQKRKARILVVDDDPGLLRLLTIRLR
Ga0316048_108744	Ga0316048_1087441	F001748	ERRSFRTLSVELDLVNTMKTKITSRAILAVVLLMTTFAVAAPKAAKPNASQDVPAFPGTLVNARYVYVTSYDGDQFNPNLLSDDRQAIGTVQDAMEKWGKFIVVYQPQQADIVLMVMSRPSEDILAVYDAHGWPGNSQYLWRMMGRSGLQATEAPLVTNLEKAFEQATAGK
Ga0316048_108905	Ga0316048_1089051	F038685	VAARRPEKPFESTTEIIPGDRGKDGGSWCPDSPQHSNVPQAISPAPLVGVMTDQLHELRS
Ga0316048_109038	Ga0316048_1090381	F102610	MYFTRTFFNNIGVVESVGDGIINILGLQNAVNGEMIEIYTSLTLNGIQSQKA
Ga0316048_109483	Ga0316048_1094832	F005057	FERVLTQARLTNLPKIVQFTLKADMAMFMQYHIPVQEGPAICLQILTETLAGSDENVLGPASFAVTIEHLSTFATARTATEEARMARRKQRTPFKPSNSSQLKLPARNQLV
Ga0316048_109509	Ga0316048_1095092	F001758	GERLGQAGWRNPSNVKPQGIMAEAGFTSSSGGVRAPSVNAKKGLSGEGRLETVPSRVK
Ga0316048_109634	Ga0316048_1096341	F039163	RSYAYYMPMTVIVTERYTGHIGSDKTPIRTVPPCGILVNSLTTEPAIWKMQC
Ga0316048_109656	Ga0316048_1096561	F012024	MHGTEHRVSERRALRLLASRQPVYPASASTLPDAPQPLILSKTGPFARNGLSLTRVTSAYADPIPGSKVLACHFAHSLAGLPTRSALRLRRQSLVCPSFRLHPRLKPVVFFTGLLCRLCRLLPLPFRSFRSLRIKASTGFATVRSTFRNRPISVRSPQPFHLKIW
Ga0316048_109861	Ga0316048_1098611	F003556	VAQEHGMECTGQVVEKREQGTFLRKRFVQSVKRTFPVPSFGRVLAKLPVRSNFNKAVSDDDYMAGKLLSAAYEHRHIASIRGLLLSTAEQLSPTPFLDMRNQAMAYKYTAEELRNMTINANVIDPDVLGSFLYNVYNVWEPDLIDCYASVCDGILGFQTVNRKSGKQNVL
Ga0316048_110367	Ga0316048_1103671	F012888	KERGKGESHVMKSLFLKIFLSFWMAFALFLVLAILVTLAFRPRTSSWEALLATTMNDSVNAYEQKGAAGLGEYFDNLEHTQHVRVFLFNENMEEVLHRGAPEWALRVAKGGPRVPHEGFIFPAPPPVLRDSRASSDGLHRYTLVLSPPAGPRLFLGPRGLPFPGLII
Ga0316048_110397	Ga0316048_1103971	F022475	IFLMRSFMDVVEIRPSQTGTEIKLIKHVHGRSAGVKEGSQ
Ga0316048_110404	Ga0316048_1104041	F038685	VAARRPEKPFESTTGIIPGDRGKDGGSWCRHPLTAAMLTEAISPAPLAGVMTGQLHELRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031809: Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA5 (Metagenome Metatranscriptome) (v2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences