NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300029304

3300029304: Anaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-Illumina



Overview

Basic Information
IMG/M Taxon OID3300029304 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0118569 | Gp0137183 | Ga0119857
Sample NameAnaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-Illumina
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of Queensland
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size169983460
Sequencing Scaffolds23
Novel Protein Genes24
Associated Families23

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria10
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1
All Organisms → cellular organisms → Bacteria → FCB group1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1
Not Available3

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameAnaerobic Bioreactor Microbial Community Of Freshwater Lake And Wastewater Samples From Australia
TypeEngineered
TaxonomyEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Anaerobic Bioreactor → Anaerobic Bioreactor Microbial Community Of Freshwater Lake And Wastewater Samples From Australia

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)na → na → na

Location Information
Location
CoordinatesLat. (o)N/ALong. (o)N/AAlt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F002525Metagenome / Metatranscriptome552Y
F011712Metagenome / Metatranscriptome288Y
F020376Metagenome224Y
F023370Metagenome / Metatranscriptome210Y
F025315Metagenome202Y
F025496Metagenome / Metatranscriptome201Y
F026597Metagenome197Y
F028211Metagenome192Y
F030366Metagenome / Metatranscriptome185Y
F031391Metagenome182Y
F041156Metagenome / Metatranscriptome160Y
F045540Metagenome152Y
F052687Metagenome142Y
F054974Metagenome139Y
F062207Metagenome131Y
F063202Metagenome / Metatranscriptome130Y
F068263Metagenome125Y
F076231Metagenome118Y
F078881Metagenome116Y
F085674Metagenome / Metatranscriptome111Y
F088925Metagenome / Metatranscriptome109Y
F099529Metagenome103Y
F104921Metagenome100Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0119857_1000062All Organisms → cellular organisms → Bacteria77088Open in IMG/M
Ga0119857_1000140All Organisms → cellular organisms → Bacteria49490Open in IMG/M
Ga0119857_1000144All Organisms → cellular organisms → Bacteria49253Open in IMG/M
Ga0119857_1000188All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album40703Open in IMG/M
Ga0119857_1000235All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album35518Open in IMG/M
Ga0119857_1000250All Organisms → cellular organisms → Bacteria33897Open in IMG/M
Ga0119857_1000440All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album21891Open in IMG/M
Ga0119857_1001225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium9267Open in IMG/M
Ga0119857_1002205All Organisms → cellular organisms → Bacteria5726Open in IMG/M
Ga0119857_1002445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5238Open in IMG/M
Ga0119857_1002770All Organisms → cellular organisms → Bacteria4732Open in IMG/M
Ga0119857_1003702All Organisms → cellular organisms → Bacteria3734Open in IMG/M
Ga0119857_1003886All Organisms → cellular organisms → Bacteria3585Open in IMG/M
Ga0119857_1004435All Organisms → cellular organisms → Bacteria3235Open in IMG/M
Ga0119857_1005659All Organisms → cellular organisms → Bacteria → FCB group2677Open in IMG/M
Ga0119857_1006311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2470Open in IMG/M
Ga0119857_1008456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1976Open in IMG/M
Ga0119857_1019873All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1089Open in IMG/M
Ga0119857_1023192Not Available984Open in IMG/M
Ga0119857_1024729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium945Open in IMG/M
Ga0119857_1053190All Organisms → cellular organisms → Bacteria592Open in IMG/M
Ga0119857_1057981Not Available564Open in IMG/M
Ga0119857_1062025Not Available542Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0119857_1000062Ga0119857_10000627F099529MNIFDILIHISLALIILYILWHGYVVVVAFRWKQADKLISRALAPRDDTL
Ga0119857_1000062Ga0119857_10000628F104921MTQPNNNMPIIRPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPTDVQSGSQVVINTDHVVPQTPAETSTAMQTTIRELRYGDGETPNAFEGEIEGFQAFVQVHGYVPPTREVLIQWATSSQGGA
Ga0119857_1000140Ga0119857_100014039F088925MQERKCSKCGSANVYKNTSNNWHKDGIVLQMIAKDSFHDLFQTEAFLCLDCRNLELQVAETSMMYGKQKTLVDTIQASNNWVKA
Ga0119857_1000144Ga0119857_100014421F025315MQNYPVYTFEILLIVVMPLLVLYIKGSWPLRKVIPCIMVIPILGYFTYAPLHELSHAAGIYLVGGKVIVWKLIPRFWLGEFARAWLTPSGINQWWQQLTMTVFPYIMDIVCFIVAIFSFRRGSSRNPFLIGLAFMLLCLRPACDFVFEPIAFLSGDRGDFYAIQQIVGPFAILSFILISIGLAVYSISSTLSHLVRFSKQ
Ga0119857_1000188Ga0119857_10001882F026597MDLFERHRIFISITLAMVILGVVGVTVSSFSPSKKSEYFRELKEIHTAVNNYDKVINSWESARNTLVDLNYWFDFIPRYDAISEEDQDVLVMQENVKDLAIRHQLRFLPEIRKYFGEYLSSRLAGLDYKITILNDERNKIIVFTHDSFTKRTLLEKFHNTVANDLRLLGFKQIRYKWYELEKLKEEKYILYNFSDLPDNEVRKFTISAIKN
Ga0119857_1000235Ga0119857_100023519F063202MKTFFLLLLFAINAFAQDSTMNLQGYDVTLGMNMMEVWENLKSGFNVVEEEDGTFYISDKNDSPVGIIKFKNEIAVTIIKDWGTTNKTNSGQVFKTLWNICKQYEKDLDDAKILPIESFTPKGSKFALQIYLTENRYLDITIQHTVTILEVLENKN
Ga0119857_1000250Ga0119857_100025029F078881MKNKIKLLIISIILLTLLVLSGCGTGQVSVGIGVYVPGAWGGPYSPGYYPPVGVGYPLY
Ga0119857_1000440Ga0119857_10004405F076231MIQLKPNKNGTADVNEFSGFVSTKHNGVTNLTKIVLAISVLLAVLMFVSK
Ga0119857_1001225Ga0119857_100122512F025496MHSLRDHLNRTPEVRSRNLAAWMAPALGERATPMAPRFFEEAALTVLAHVFRESGPIREALIFERRCFERLVQLIHRLPERGGGR
Ga0119857_1002205Ga0119857_10022055F045540MLRYLYTLAMLLDSKSKIRKHYSADIVISNLFDENLDEIDFIKSLSELELIYGFEIPDSLYDQTDITLGKFAYELSQLPKVSDQLYPEFFDIKFTSMKLMEKWIPLEDKTDEESISERDEINQQFELLNYRLNILLGNVLVN
Ga0119857_1002445Ga0119857_10024455F068263MPDAAEVYRPVDDSGKLSSGDIAYLSLARTRVTGETPPGEVFDPIGRIPGYPNPALFRLPHGREVALDTMFALVVTHSCEIDRQKNQDISADHVDCRLTVAPIVPEPAVTLVGENGAITDAISWAAVERNDPVSSVYLPPIEDVSRFAPGVEMPWPRAFADLRGLATVSRRMVIADRLCGLTAAYVGMLQRQLARFFTWRDLARHELVEEMTGRRIEAVVPLNPKAGRWRLALTADDGSSITVEVRTQAESA
Ga0119857_1002770Ga0119857_10027702F062207MSGLRLAGALWIMAGVTCAGLLSFVLIGERLNDLGALLANLALPARVLGGALVAFLIGSLLLTRPGPNVVRWSSLVGVAWLIAFGPLVVTAVAAALGGSEVGPVISSSLITSLGIAGAVVGYWSRMAARRLK
Ga0119857_1003702Ga0119857_10037024F028211MESIWMGIAPGTKATRVIAMSGPSELLMKARLEREPKHPRALATLLEAMALWQGAPVRAALCADSARPTCDSSLFREAFLDDGGALFSVVWVPVRAGRPRRDHLHGLGSFRDLERLVVEEVAR
Ga0119857_1003886Ga0119857_10038862F041156MARALRLKAVDTNLRSLAVAMTRTAAMLLIAVLLILVLLPAALAASGG
Ga0119857_1004435Ga0119857_10044353F011712MDLAITLGLGGWLLLIAGAIAFGVVAQFIGRAETGIEWLVDAIAAGIGALVASEFIVSWRTFEPVWDGLALVPALVGGLVVGIVVEVATRRITGGTYSGRSMAAA
Ga0119857_1005659Ga0119857_10056593F052687MVRFLSIIIIIAGIGGGIYYLLSMERTEDIKVTGKLQISQQPGKYVQTSEGSGGSYFAVVEGKIRNNLGKPIKNVFIKYVIAGEETSATVFDLAPGQEMKFNTRGVNTSETHPEYNFVGIYYD
Ga0119857_1006311Ga0119857_10063113F025496VRPMHSLRDHLNRTPEVRSRNLAAWMAPALGERATPLPDRFFEEAALTVLAHIFRDAGPIREALVFERRRFERLVQLIHRLPARGGGA
Ga0119857_1008456Ga0119857_10084563F030366MTPETFISILALTLLATGWMLWLLPVGTCAQCPHCRIEKLAREREGDGQVGAVHGGPFCPVCGRHHRREEDHRF
Ga0119857_1019873Ga0119857_10198732F020376MDKKKGTVREQWMQRTEAAYQRMFEGKGQKELATLTQREDMAVSIGKELAAFLLEEHVALDPAAQPAEASSTCCPKCGQAGIPAVRENEELVERSVTTRAGDIQLRRQRWWCAKCRIVFFSARRSAWFGDGRL
Ga0119857_1023192Ga0119857_10231921F023370MAIPPAAPAGARTLVWHLESGGWTEREAGNLVALMHGLRPARSGWSVREIEHLRFLQALVKTGRIGR
Ga0119857_1024729Ga0119857_10247292F031391MADWDEAPPTFDRDSEAWGATASAWAEEDEGGAGEQFLELIGSELWVAGTVDLGRFRRVSDFVNIVQGYLLIRDAAVLSRSGEATRLAMPELRVLPDDVAVVGQRETDQAPRATEGAVVIERTRQRLVVFTRSHLIDGDVYIHGDGSIMAFVDATDPKFIPMTDVRIRWLSDRKLAARYPFALVQRSQILGVATEGIKLGPSEPDAAPAETAAEELT
Ga0119857_1053190Ga0119857_10531901F002525AGVDSLWEQEKPEARKMLENAADSHTSGARFVSRRFC
Ga0119857_1057981Ga0119857_10579811F085674MPGEPLLLGIATIAIVVAGFTGVTSAMTPSDGSWPPAMRIRQRAIVSTSFNVVFEALAPVIAFAWLDDPRGAFMLTSLIVAVYLTGIVTWRGRQLWRAGGNRTGSALVLFALGPIATLLFWANAIAIGGLV
Ga0119857_1062025Ga0119857_10620251F054974MTRFQLNRSRFIVGVVLVIIAVLMFLFAEGDYATAGAIGIGLLGLISIAISRRN
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