Sample 3300025947

Overview

Basic Information
IMG/M Taxon OID	3300025947 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101371 \| Ga0210067
Sample Name	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	120801231
Sequencing Scaffolds	52
Novel Protein Genes	57
Associated Families	51

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	3
All Organisms → cellular organisms → Bacteria	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1
Not Available	13
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.209766	Long. (^o)	-122.033424	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002064	Metagenome	597	Y
F003800	Metagenome / Metatranscriptome	468	Y
F005490	Metagenome / Metatranscriptome	399	Y
F005789	Metagenome / Metatranscriptome	390	Y
F005939	Metagenome	386	Y
F006186	Metagenome / Metatranscriptome	379	Y
F009540	Metagenome / Metatranscriptome	316	Y
F009838	Metagenome	312	Y
F015115	Metagenome / Metatranscriptome	257	Y
F016087	Metagenome / Metatranscriptome	250	Y
F016664	Metagenome / Metatranscriptome	245	Y
F017823	Metagenome / Metatranscriptome	238	Y
F018371	Metagenome / Metatranscriptome	235	Y
F020196	Metagenome / Metatranscriptome	225	Y
F020200	Metagenome	225	Y
F022218	Metagenome / Metatranscriptome	215	Y
F023130	Metagenome / Metatranscriptome	211	Y
F026597	Metagenome	197	Y
F029006	Metagenome	189	Y
F030040	Metagenome / Metatranscriptome	186	Y
F030144	Metagenome / Metatranscriptome	186	Y
F032367	Metagenome / Metatranscriptome	180	Y
F032460	Metagenome / Metatranscriptome	180	Y
F034612	Metagenome / Metatranscriptome	174	Y
F034884	Metagenome / Metatranscriptome	173	Y
F034983	Metagenome	173	Y
F042847	Metagenome	157	Y
F050409	Metagenome / Metatranscriptome	145	Y
F057255	Metagenome / Metatranscriptome	136	N
F061613	Metagenome	131	Y
F063813	Metagenome / Metatranscriptome	129	N
F064701	Metagenome / Metatranscriptome	128	Y
F067790	Metagenome / Metatranscriptome	125	Y
F069741	Metagenome / Metatranscriptome	123	Y
F071280	Metagenome / Metatranscriptome	122	Y
F072487	Metagenome / Metatranscriptome	121	Y
F072817	Metagenome / Metatranscriptome	121	Y
F073995	Metagenome / Metatranscriptome	120	Y
F074891	Metagenome / Metatranscriptome	119	Y
F081028	Metagenome / Metatranscriptome	114	Y
F081557	Metagenome / Metatranscriptome	114	Y
F082105	Metagenome / Metatranscriptome	113	Y
F084190	Metagenome / Metatranscriptome	112	Y
F092300	Metagenome	107	Y
F093675	Metagenome / Metatranscriptome	106	Y
F095700	Metagenome	105	Y
F097674	Metagenome / Metatranscriptome	104	Y
F097761	Metagenome / Metatranscriptome	104	Y
F098275	Metagenome / Metatranscriptome	104	Y
F103514	Metagenome	101	N
F105268	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210067_1000528	All Organisms → cellular organisms → Bacteria → Proteobacteria	4361	Open in IMG/M
Ga0210067_1000621	All Organisms → cellular organisms → Bacteria → Proteobacteria	4013	Open in IMG/M
Ga0210067_1000894	All Organisms → cellular organisms → Bacteria	3375	Open in IMG/M
Ga0210067_1001668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	2562	Open in IMG/M
Ga0210067_1002093	Not Available	2310	Open in IMG/M
Ga0210067_1002117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2301	Open in IMG/M
Ga0210067_1002140	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
Ga0210067_1002466	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
Ga0210067_1003442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1847	Open in IMG/M
Ga0210067_1003946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1746	Open in IMG/M
Ga0210067_1004582	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
Ga0210067_1004823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1603	Open in IMG/M
Ga0210067_1005772	Not Available	1483	Open in IMG/M
Ga0210067_1006653	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
Ga0210067_1007932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1300	Open in IMG/M
Ga0210067_1008102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
Ga0210067_1008486	Not Available	1260	Open in IMG/M
Ga0210067_1008520	Not Available	1259	Open in IMG/M
Ga0210067_1008978	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium	1230	Open in IMG/M
Ga0210067_1009190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
Ga0210067_1009278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
Ga0210067_1011479	Not Available	1104	Open in IMG/M
Ga0210067_1011770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1092	Open in IMG/M
Ga0210067_1011875	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
Ga0210067_1016808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	942	Open in IMG/M
Ga0210067_1017590	Not Available	923	Open in IMG/M
Ga0210067_1018432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
Ga0210067_1018747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	898	Open in IMG/M
Ga0210067_1019036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
Ga0210067_1019441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	885	Open in IMG/M
Ga0210067_1021520	Not Available	848	Open in IMG/M
Ga0210067_1022367	Not Available	836	Open in IMG/M
Ga0210067_1024244	Not Available	808	Open in IMG/M
Ga0210067_1024898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
Ga0210067_1024942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
Ga0210067_1026623	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
Ga0210067_1027121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
Ga0210067_1028505	Not Available	756	Open in IMG/M
Ga0210067_1028666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
Ga0210067_1030017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	741	Open in IMG/M
Ga0210067_1033256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	709	Open in IMG/M
Ga0210067_1034235	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
Ga0210067_1043365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
Ga0210067_1046041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
Ga0210067_1051493	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon	589	Open in IMG/M
Ga0210067_1053440	Not Available	580	Open in IMG/M
Ga0210067_1060777	Not Available	547	Open in IMG/M
Ga0210067_1061379	Not Available	545	Open in IMG/M
Ga0210067_1061430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
Ga0210067_1069468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	515	Open in IMG/M
Ga0210067_1072058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
Ga0210067_1072245	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0210067_1000528	Ga0210067_10005282	F029006	MNKIIITLMAIYFVGDPHLQYLAWLGDLKLYIVAAAIALVSMPWIAEQLDG
Ga0210067_1000621	Ga0210067_10006212	F063813	LTNEEVLPIIQRDALMSLVQWSQAHGQKLKPTELESNAQPLAKPSPSSKKPAHQFDSRTGSAPIDETKTIERGLS
Ga0210067_1000894	Ga0210067_10008942	F034612	MNAPEPILDYLRNQIHAYPFDPKLDEAFVHELIEDFHDLDILEETKTFKWYHNNRPADRFKNVRVGLRRWIANSWARQTD
Ga0210067_1001668	Ga0210067_10016682	F097761	VTPLAAEAWPAVFGGLIPIIGLAAVGYLIIRAVRDRDDDE
Ga0210067_1002093	Ga0210067_10020934	F023130	MTRRFWVPATALLLSSILVMTGSISHDAMAGIFVLSQSSGSSIVEGEGPATMKMGPAEEFETHSQRDVSSRYWMRGIVLLILILLILWLIYRTFTGWKPMISRSVGFLPELQA
Ga0210067_1002117	Ga0210067_10021172	F032367	MGHKRDIKQFRQACKEVGLTIRERYEASEALHAEKQAGSVQSNMSYGELLAWLRQWKG
Ga0210067_1002117	Ga0210067_10021173	F005789	MEGLMATAVALDASPLNVLRSMRGQIVDARIAYPEVLHVEVKDSAGELWHLATQDAEWSPTDPAALIGRSVDDADINAETGELRCKLSDGSLLDVRPAAREAEDDPPNWELITPGGVVLEFGPGVRWQIGSADSRASSRA
Ga0210067_1002140	Ga0210067_10021402	F034884	MQELIVEIGLRVAKLVVASVLGAVIYAVLTGPVGAPGSAQLALESWLAGALVILLLETGI
Ga0210067_1002466	Ga0210067_10024662	F095700	MAQTKPDWPVSFSLSAKDRPESKEQSALRSALSSASWRRSGCSPAVPYPPHECFQSIIPNAFSLTKGTFLLCQEGDISTLG
Ga0210067_1003442	Ga0210067_10034422	F072487	MFPKEYKYIIGVGAILFGFFALKFPEYQHPIYGYINLGKYHVYIGIACVMFGVLYIAHTRSKTRK
Ga0210067_1003946	Ga0210067_10039461	F098275	RRTLLEPSHEAEWARLNAEKRKLLTPPPGTAIGELLRRGQELSSQAAGLLRAVDRANDGRQP
Ga0210067_1004582	Ga0210067_10045824	F103514	MKEDISIKRITFNLKQNRKFIEIDVPADEILQSVEADSLDFEKLVKQKVIEYIQAL
Ga0210067_1004823	Ga0210067_10048231	F005490	MDQLASDARRLATIGTFFIVAGWVFVIYALVAGVIWWIDLAQREAFNVIEALAISASAIGLPIFAAFAVAGFGYALRLFALYVAAKTQ
Ga0210067_1005772	Ga0210067_10057723	F084190	TWHFEEEALEGTETILGGAFESSMTVPGLTTECENFLYKLAIENEEGAGTGELSEMPLYECSVDSDACTISKIGAEKLPWKSHLATFSGDDYIVFEAVKVGIIYVGEECVLDETLVPVTGSAGGVIDNGEETAEFDNETLEASETSLKALGTKIEWNGLFPTEAFEWHREEAISVS
Ga0210067_1006653	Ga0210067_10066531	F073995	MVRVARRVGIAFGSFVIAWLAVALVANWLFGSGNFLVWVFAAVVGAVVYVVLLWRNRRDG
Ga0210067_1007932	Ga0210067_10079321	F082105	MFIAPMAAPTMHEPPRCAARPNATVQRAVAGTVMRIDSAGSGRANEKK
Ga0210067_1008102	Ga0210067_10081025	F016087	MKKLWGSFGKIVDVLVTLVLVVMFTALAFSIGYHVGFSVGLDTKVTWVGEKYTMKV
Ga0210067_1008486	Ga0210067_10084861	F016664	SVAKHTVEVVVHLSDQMNDQQRHNLVVALENTQGIVSAEFCILRDHLMLVRYDRDQSSSQDVLKEFENQKVNARLIGPI
Ga0210067_1008520	Ga0210067_10085202	F003800	MGDERREDAADRRRADVYSSARIGAAAALTLVLDVAVPDYDISPGILLPLLGAICALLGLGASAVWRSVK
Ga0210067_1008978	Ga0210067_10089782	F026597	MLNMFERHRLIVSAALAVLIIAVVGVTVSSFSPSKKSEYFKELKQIYNTVNNYDNREIINWESAKNTLVDLNYWYDFIPRYDAISDEDYDVLVMQNKVRELTTRQQSRTLPEIRRYFGEYLSDKLYGMNYKVTILNDERNKIIVFTHDSFTKRNALEKFHVTVVNDLRILGFKQIRYKWYELEKLEEEKYIHYNFSDLPDNEPRRFNLSVLKNQ
Ga0210067_1009190	Ga0210067_10091902	F064701	VSAAEGRPLGAAPLPTVLLGGLGDRVQVPVRRIPSGPPSTLYYSMKHRTQLYLDEGQYRWLKQRAGKAGSIAAVVRELIDAERGRGVDPGIDPLLSYLVDEAPGKGREGTSVSTLDRDLYGP
Ga0210067_1009278	Ga0210067_10092782	F061613	MCHHVHVTLSAEDKKDVKRLSGLIIPIYASIVLAAFAVVALTGAPRQGELIASASAPAAA
Ga0210067_1011479	Ga0210067_10114792	F029006	MNKIIITLMAIYFVGDPHLQYLSWLGDLKLYIVAAAIALVSMPWIVEQLDG
Ga0210067_1011770	Ga0210067_10117703	F003800	AGMGDEHRDDAAPERVRADAYSSARIGAAAAFTLVLVVLLVLDVVVPGYDVSPGTLLPLLGAILALLGLEASAFWKGMR
Ga0210067_1011875	Ga0210067_10118753	F032460	PLQEVAQQAAEWCRGKLEMREGGFGKDHEHSETERAALHTVHSIAVCEIARLQAILEG
Ga0210067_1014267	Ga0210067_10142672	F093675	MAPYIAIVLSIGLLALIGFAAIGWGIDSRPSYSDDHIR
Ga0210067_1016808	Ga0210067_10168082	F071280	MNDESKPVERVIGLDAHPDSFTAAILRGPTPVAATVEKMFNKVPLAQLTSW
Ga0210067_1017590	Ga0210067_10175902	F009540	PETQIPLTPGDQAPPAVGQPVALDPTAPAKTEITLDKRTVVGAGVGFSGPLGGGASLRILHGLGADVKDGSTRVKAVCAVPMPHCAQGFLLQADAGSGGGKLSLGVGAWANVHDDDFRGTAGVAVRLAVARTWGNPVGTSPGLTYLGPELDLSVLRIDLTLGVLFKVAGDGGSGALFSWGLGFGL
Ga0210067_1018432	Ga0210067_10184321	F050409	MADNGIRIIDIDGHVREADDLFEKYLEAPFRDRVPKIEKVANGQLLFRLEGERHHRRPDESPFRIKTDGSPVNEGRHLATNPKQR
Ga0210067_1018747	Ga0210067_10187471	F074891	MSVVTHDVVLKRKPRKKRGKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEAGKKA
Ga0210067_1019036	Ga0210067_10190362	F097674	MSSSTPMSMSPEDQLVGLLSRWLAGHLDNTELREGIAGASRVGLSADQSAALDELAAELERAGPTGRGDLEMVARETLEALVLG
Ga0210067_1019441	Ga0210067_10194412	F105268	MIRRITGIILGVLAFVLVYWITGLGTPSEPNWALAALIGLVVALIWPWIFGLYAVRRVRQKRQND
Ga0210067_1021384	Ga0210067_10213842	F092300	VPGDVGRWRVADGEEARLTPGAAAPAEVWSRGFLPLRTRVPGSFRLRPAFPGTAVVLGTTSYEVLSETELPEEGLVVYRMRAWPEAEVVRDRVVYGPAFVRAAQAERERAALRERARPFRVLLYPIVGLLAEEDQVRLSERFGLYAPTATFVSGLVEGFLILLVPLLLSRRGAAYAIGAVSVSVAFSLLALPALGRAFSAFFLRETGGSAPVVLVVEALRTLGLRR
Ga0210067_1021520	Ga0210067_10215202	F020196	MYSCGPRIEPGNRLESRQYAVTGRQQSCARQGERVGHHRGLRTGHVFTGVTRELGRASRLLGSKSRKMGDRRNQHPGDCRSTWSTIEPKLAQAGRDTKSSTSPQGTGREPKANQPGRTKAVVATRSTAGPGAAGHLVRRRGELRPKGPTIKAVRRRKGEAGHDLWTREIQE
Ga0210067_1022367	Ga0210067_10223672	F005939	MPPRVRAHPFLTLMAVVSAILILVGRVNHDLWWGDWVFVAGIAVVVVAGVLFLLETRK
Ga0210067_1024244	Ga0210067_10242441	F029006	MNKVIIALMAIYFLGDPDLQYLAWLGDLKVYLVAAAIALVSMPWIASQLDG
Ga0210067_1024898	Ga0210067_10248981	F057255	MSQIGEPLRIIEVEPLEKPVPEKEVPFEQPADPVKEPA
Ga0210067_1024942	Ga0210067_10249422	F017823	KIVFPIEMQNQRKRDSCVKGYPMEASATSLIPLSLLKKMYP
Ga0210067_1026623	Ga0210067_10266233	F081557	RAFAGRHGIGLSTLGKWLRAEGQATLPPVKFREVVLPNTPLRYAVEVVSPQGWIVRLQNSSEVQTLPQLLQALPC
Ga0210067_1027121	Ga0210067_10271212	F032367	MTRKRDIKQFRQACKELGLTPGERYAASKAFHAEKKSLGRQDHLVYGELIAWLRQWTQR
Ga0210067_1028505	Ga0210067_10285051	F018371	MQEMEVYVNGPEGANRLFMHSGMAEVEIRGGLPHPRWTLEVVCFELGRTYDLSEESIIKINASAALAGGRMDGVASFAGWQVFGAAGELDNESRRVRMNIAAGARDTQAFLEQISFQINILARVKE
Ga0210067_1028666	Ga0210067_10286663	F009838	MSVTTHSHSRTKPMKVICDRCKQTIDGIRGQEFTAGFYDMAKWEEFRRENEHYLCASCMFADPKFLERYGSCF
Ga0210067_1030017	Ga0210067_10300172	F020200	ERLEHLITSWNEEQEFQEQTSSDDYHRGLSKGFSECVKDLSEAVASMRLKGICEKFPEYERVLNDKQRLDILEDLLKLRDEDTNQE
Ga0210067_1032566	Ga0210067_10325662	F029006	PGLQYLAWLGELKVYIVAAAIALVSMPWIASQLDG
Ga0210067_1033256	Ga0210067_10332563	F072817	KVDCELAAVAFGEPAESLSRVANGTALRCKGFLARRYRTGITVALHVNEFELLDHD
Ga0210067_1034235	Ga0210067_10342351	F030040	FPPSGEIAMLDTTLDGTRCQTIRRIAHHGGYLPRELGGTIRYSLENIGRMLLRVDFDSGESLLVLPHDIAVDGSSS
Ga0210067_1043365	Ga0210067_10433652	F081028	MPIRYLDDATPVVQFDPQHEVSPFALFRRLKEGNPPLLVDVRPVPGRLSLEGALPYPGPEWSPPRDRDVVLFDDDGTTALDGARHMQAAGQAQVKALFGGLELYEFSLDPEVVGAETFLVRS
Ga0210067_1046041	Ga0210067_10460412	F002064	YTVEAYKTFQKLAEKLPNPLAATMFKQFAVDERGNRDLIEMKIAAAGRDLVRITLGPDLIFSEILEGEMSYRESAEFLISRERTMQLKLREFIAGASAIDRTLLIYFETTKRAHIVELERELEVIREDGNWWKREDAERRIVHGTASA
Ga0210067_1046366	Ga0210067_10463662	F034983	ELDEDAGRLMSQIAVEGAPMEHLSAEECVRVLRRQPLEARMAEIQKSLAGASGEAEDALLAEKIRLRRQMAEQ
Ga0210067_1051493	Ga0210067_10514931	F069741	MENIIFDVDQFSCLDKIEQAQRLEEAERRIDEVQRAAADDPDSMSWVDQQRQYLVDMQHLIFEC
Ga0210067_1053440	Ga0210067_10534401	F022218	YRDIMGFTVQGETKFTADAALRNLTGLAKAEVRQARIQHPGSPMWIELAEYKGVDRKPLQMKIQDRGASRLQIRVQDTDVAVTASKAGGLKVLSEDGIAQPIPPNFKGALIADPNNFFLTAFAPCAVAVGLFGLHT
Ga0210067_1060777	Ga0210067_10607771	F006186	MRNFGGILLLLGVLGFFYASTQIEKLAPVPDGKSVTESLEYPAGRWEMARYGSAGAGLLGLLLALFPKGR
Ga0210067_1061379	Ga0210067_10613791	F042847	MPRVELDLESADDLRLLRGALLAARATELAEAQRRGFRQSYGKASDSASASMGAEVAHHLRRIELLDRLIAAIAEAG
Ga0210067_1061430	Ga0210067_10614302	F067790	IEDGRGNVQITGKGVLVGRMEKGSLEITDLSAADQWSPRVNGIPRARVVKLRGKIVSFYVPGGRYRLVARGVGISISARGIGTVVLRGDPDSVGDTGHYAIGDTDAVPLPQVTTIVTFGTTDTTPSSSRSVKIRP
Ga0210067_1069468	Ga0210067_10694682	F098275	MASRPRTLLESGHEAEWARLNAEKRKALTPPPDTPIGELLRRGQALSSQATGLLRAVDHANEHPRP
Ga0210067_1072058	Ga0210067_10720581	F015115	MRAKLAGVCLFAVALALATGVPAQQPTGTAITDIRQESSDRSTRLVVECTGPLAYTYYSPDPLTLVVDIPEVDASQVPARVN
Ga0210067_1072245	Ga0210067_10722451	F030144	SQRPLHGDQPLFIHFSSTPLFRLENSPATYAHLLRKKDLIHIGPIVNYFISGSGHVVYLGGEAVKNLYFYGKRKYKSLNMLAILTVRDVERYSCILNNIISSNDGAFSMGWKFLVRKNRSDGCFKDIAEARYIIEARLEGPEKLLYPFRPAAIELDLTTEHRFLHAF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025947: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences