Sample 3300025742

Basic Information
IMG/M Taxon OID	3300025742 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0293441 \| Ga0255248
Sample Name	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_8h (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_8h (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	69050991
Sequencing Scaffolds	39
Novel Protein Genes	46
Associated Families	38

Dataset Contents

Total Genome Size

69050991

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	26
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1
All Organisms → cellular organisms → Bacteria → PVC group	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium

All Organisms → Viruses → Predicted Viral

All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016

All Organisms → cellular organisms → Eukaryota

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea

All Organisms → cellular organisms → Bacteria → PVC group

All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Ecosystem Assignment (GOLD)

Name

Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater river biome → river → river water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: New York
Coordinates	Lat. (^o)	45.0061	Long. (^o)	-74.7949	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Location Information

Location

USA: New York

Coordinates

Lat. (^o)

45.0061

Long. (^o)

-74.7949

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000191	Metagenome / Metatranscriptome	1666	Y
F001583	Metagenome / Metatranscriptome	668	Y
F001682	Metagenome / Metatranscriptome	652	Y
F003495	Metagenome / Metatranscriptome	483	Y
F003666	Metagenome / Metatranscriptome	474	Y
F011303	Metagenome / Metatranscriptome	292	N
F014605	Metagenome / Metatranscriptome	261	N
F016262	Metagenome / Metatranscriptome	248	Y
F019993	Metagenome / Metatranscriptome	226	Y
F020340	Metagenome / Metatranscriptome	224	Y
F021094	Metagenome / Metatranscriptome	220	N
F023359	Metagenome / Metatranscriptome	210	N
F025295	Metagenome / Metatranscriptome	202	Y
F025755	Metagenome / Metatranscriptome	200	Y
F025928	Metagenome / Metatranscriptome	199	N
F026277	Metagenome / Metatranscriptome	198	Y
F032863	Metagenome / Metatranscriptome	179	Y
F037218	Metagenome / Metatranscriptome	168	N
F043244	Metagenome / Metatranscriptome	156	Y
F047509	Metagenome / Metatranscriptome	149	N
F048103	Metagenome / Metatranscriptome	148	Y
F050328	Metagenome / Metatranscriptome	145	Y
F054859	Metagenome / Metatranscriptome	139	Y
F064416	Metagenome / Metatranscriptome	128	N
F066466	Metagenome / Metatranscriptome	126	N
F067678	Metagenome / Metatranscriptome	125	N
F070166	Metatranscriptome	123	N
F076857	Metagenome / Metatranscriptome	117	N
F081251	Metagenome / Metatranscriptome	114	N
F085156	Metagenome / Metatranscriptome	111	N
F085216	Metagenome / Metatranscriptome	111	N
F086577	Metagenome / Metatranscriptome	110	Y
F086641	Metagenome / Metatranscriptome	110	N
F089854	Metagenome / Metatranscriptome	108	N
F092117	Metagenome / Metatranscriptome	107	N
F095375	Metagenome / Metatranscriptome	105	N
F100333	Metagenome / Metatranscriptome	102	N
F103246	Metagenome / Metatranscriptome	101	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0255248_1001405	Not Available	2233	Open in IMG/M
Ga0255248_1003436	Not Available	1657	Open in IMG/M
Ga0255248_1004262	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1520	Open in IMG/M
Ga0255248_1004292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1516	Open in IMG/M
Ga0255248_1005487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1376	Open in IMG/M
Ga0255248_1007977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1180	Open in IMG/M
Ga0255248_1008247	Not Available	1164	Open in IMG/M
Ga0255248_1010818	All Organisms → Viruses → Predicted Viral	1031	Open in IMG/M
Ga0255248_1012008	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	981	Open in IMG/M
Ga0255248_1013044	Not Available	946	Open in IMG/M
Ga0255248_1013294	Not Available	937	Open in IMG/M
Ga0255248_1014508	Not Available	900	Open in IMG/M
Ga0255248_1014934	Not Available	888	Open in IMG/M
Ga0255248_1016883	Not Available	837	Open in IMG/M
Ga0255248_1019068	Not Available	790	Open in IMG/M
Ga0255248_1020294	Not Available	765	Open in IMG/M
Ga0255248_1020453	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	762	Open in IMG/M
Ga0255248_1020809	All Organisms → cellular organisms → Eukaryota	756	Open in IMG/M
Ga0255248_1021601	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	742	Open in IMG/M
Ga0255248_1022257	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	731	Open in IMG/M
Ga0255248_1023008	Not Available	720	Open in IMG/M
Ga0255248_1023400	Not Available	714	Open in IMG/M
Ga0255248_1024518	Not Available	698	Open in IMG/M
Ga0255248_1026324	All Organisms → cellular organisms → Bacteria → PVC group	675	Open in IMG/M
Ga0255248_1027139	Not Available	665	Open in IMG/M
Ga0255248_1030937	Not Available	623	Open in IMG/M
Ga0255248_1033622	Not Available	597	Open in IMG/M
Ga0255248_1033657	Not Available	597	Open in IMG/M
Ga0255248_1035344	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	582	Open in IMG/M
Ga0255248_1036398	Not Available	573	Open in IMG/M
Ga0255248_1038303	Not Available	558	Open in IMG/M
Ga0255248_1038375	Not Available	558	Open in IMG/M
Ga0255248_1039342	Not Available	551	Open in IMG/M
Ga0255248_1040260	Not Available	544	Open in IMG/M
Ga0255248_1040544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
Ga0255248_1041170	Not Available	538	Open in IMG/M
Ga0255248_1043324	Not Available	524	Open in IMG/M
Ga0255248_1043727	Not Available	522	Open in IMG/M
Ga0255248_1046283	Not Available	507	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0255248_1001003	Ga0255248_10010031	F000191	TVGNLVNQHVRFIESGEKDPLMTYEKAFFTQSRPGEIPPID
Ga0255248_1001405	Ga0255248_10014052	F003666	VRIHGGEFGESARAIHRIESEKSGSSRIKEIPWFD
Ga0255248_1003303	Ga0255248_10033031	F000191	GYTVGNLVNQHVRFIESGEKDPLMTYEKAFITQSRDREIPELD
Ga0255248_1003436	Ga0255248_10034362	F003666	VRIHGGEFGESARAIHRTELERSSSSRIEEIPRFD
Ga0255248_1004262	Ga0255248_10042621	F032863	MAISTEILNTTFADLRGPLINSFIRSNELLDALMSKARMPSEGGSLIERSFAGGAPARGVGVFVGDELLNMTRRQQTKRFQVEPHRIVAAINIPKKELLFNSGKLAVIRLIEEYPQTTLEGAKADLNKYLLTGASRGLVFQTADLSGFLSLNGQFASGSGTGVTNGLLDFADPATQTEVVQNVAKSSSYYHFNQFNQITTWATDGLPTLRKTYRQCAHYAGGMGKGPDLVIMDDSTYTNFEDSRLSLVRVTLVEDKTEKSNTLGLDLGVAKVYSSIDLDLADFTSAPAQGVTYILNTDFLEMPLMEAPSITPFTERVGDQDVVTAIFSMQGNLICTKTPAQGCVAGGSI
Ga0255248_1004292	Ga0255248_10042922	F076857	MSEIREKLQDVERGLASLNDVHVGREIDVDKKSTFDPAEAYAVQRELRKKFSKMSTTELNEMLDVQASTQAGKQADSAVLNQLAMSNPAIAKALDSSAGTALIRQDLEPILYSLFVKKFPFFERIRKEPANGLVHAFNQQTAYGDAVFQTETGTVTDDNATYVRQTTNVAVLATRRGITLKNQFALGAGGSPFNGLSQELGSGVTAIANKLQKTLFQGNATVTTGASSSTELGAYDANSFDGLRKLLGSAAAAGNEIVGKGTASYLSTINTAVAGVLDNGGNPSAIVCTPTDYAGLVNELTNLVRYNAPSQVDQLAGATFGSVVTAAGSLPILAVPGDAIGAYAISGTDYRDMYVVDEAGWSMPYLGSDSITTLEIPIGVNG
Ga0255248_1004804	Ga0255248_10048041	F000191	SGYTVGNLVNQHVRFIESGEKDPLMTCEKALITQSRAREIPELD
Ga0255248_1005487	Ga0255248_10054872	F076857	MSEIKEKLQDLEKGLEALSHTPAVIGKDTDSTVKTFDANEGAALQRELRKRFKQMSSAEITEMLDIQASRENGKQASSEVLNTLAVANPQIAKLLDASGGAALIRQDLEPMLYALFVKRFPLFERLRKEPANGLVHAYNQQTSYGDAVFQTELGTVTDDVNVYARQTTNVAVLATRRGISLKSQFAIQQGGAAGNHGLATELSGGVTAIAHKLQKQVLQGNASTSTAAGASTELGAWDTNGFDGLRKLMGSAAAAGNVITAKGSSSYTAAINETVAGILNNGGNPSAIVLSPTDYAAYTNELLTQVRYPGAGSVDAGLGLGTVATPAGALPLLAVPGDGVGSYAITVSGTTTNYRDMYVIDEDAWAMPYLGNDAITTLEIPVGVAGALTRLYIQFCMYGLSNKAPQFNGKIRVTVA
Ga0255248_1005643	Ga0255248_10056433	F092117	MAIDFNGALTLADQAAISNDPLVKEITKSLHQTWNALKDIPLYTSPSLKQIGVRYLNSGIPSPNWTGVNSEPVAVKGRPKSYEEQMYLIRNKILVDHVLLDQPTNIIDPIEAQVQIFLEGFAYDFND
Ga0255248_1007977	Ga0255248_10079771	F016262	NTHTMIKFNKSTLTEIAGLGAGAVAGSYVSQKVLTKADGTYLVGTGAAGKLIAELAPVAVGLLLQGQSNTFAKEAGKGMIAQAAGGFIKSQFPALGITGDGDYSDATLLSGMDTGVDNPMISGDGNMVAPSIGAAYYDDGNEAAY
Ga0255248_1008247	Ga0255248_10082471	F003666	VRIHGGEFGESARAIHRTELERSSSSRIGEIPRFD
Ga0255248_1010818	Ga0255248_10108181	F067678	MATNYYADDEEDDDTTTDVVGQLRKVNRSLEKRAKELEQELSGLKSQTRQRTVKDVLQAKGLNPKIAALIPQDIEPSDEALLKWVEEYGDVFGIQTSTEEKPAEKSPEVKAQARINNIVATGSAPDIDEDAFAKIAGAKTREDLDALLGFN
Ga0255248_1012008	Ga0255248_10120081	F011303	DTMPAMTEAQVGTWVSEFLDALSNPTGGKKGDTGGVDWKKLEDMMNKRCTVELPGEPKCKKFDDFKKKAEEFLASFKGAKRTVPKGTKPIIVQSKKDEVEVIFPEQCLFTWSTGLAEHYPNCTLASGDKAKIFIYNRVLLNGKGECSYYQPVFSNNDFKGADRAEDTDSLLDQIYEDFTPGNARFADDMKVEFPVVGKMEKAGMFDLFAQFKGLKRQMQAGCPPVNMSTGKDEVFEGIVPCVYSFKWSAALNDTFKLELADGADVVLTSYDCLKLKSGKVISFAPHFDPSVNIKPAGKSGAA
Ga0255248_1013044	Ga0255248_10130441	F048103	VGHLIEGGTPIGITRRDIVRNEVIQFHNCVFQYQRVLKTERYVNVRVVPLLTLTDFYQGVSFEVILKY
Ga0255248_1013294	Ga0255248_10132941	F001682	QPIVPMSAVAFTAIAALSNTAEITSTNIRSGAAFDNIRASWNQALKLGDFSSKLRCDYDYKDNKDFLKEVSLTGDLMEASSNDELRVSYDVTHNFPQRKTNVKLTANTGGNTIRAELDDRQLKQVSAQRDLDLGDQKVNTDVSWMVKAQTARVKLMSNLGGGNKDRVKAQIDYDTRDNSASYEVGYQHQLNDGRDVSATFNPGDKNLDVEFVDNKFESGATWTAKASVPLENAGGNLLDNAKVTLKRSWSW
Ga0255248_1014508	Ga0255248_10145083	F086641	MKSKTLSIAVGVLLVAVLFVVMQLPRTHALPEGYTDTYFPRGGHRYLIAPGGVKKVGQEVVNYQVVGTVVTGTVRLRLEHDDFRTFRLDLKTHTVSLGDRVQEDAR
Ga0255248_1014934	Ga0255248_10149341	F037218	MNLTQLQNQKDSVLATARELASGNGDLAQVKSLMAEAKGIEERIETIKALGQGHPVATEVQAEQPWKSGGVGRNPLSGTRDEANYKAYAWGQWGRSIMGNRKAAEWCKANLKSQSEGTTTAGGFTVPDPLSSELIYLREQFGIARQNCRIYPMSSDVLNVPNATASTTVYYPGENTAITASDLTFAQVKSLMAEAKGIEERIETIKALGQGH
Ga0255248_1014934	Ga0255248_10149342	F081251	AKGLYAMHGMKSVQPASLRGVERRLRDAVGLSRSSAKRLAPVVWDSLRDADQPEEQPSIVVEAKAHDNDERQELLARLELLTQL
Ga0255248_1016883	Ga0255248_10168831	F089854	MVRILLGAFLACTIGLTSLLARSKTDTFAEIIGENAQSLLGVTRLVVVGVPGIPELSIDNPRTGPEGKLTEGTGFIRWNKWGALRVEDVEVKDSKLELKVLGMLPTRNFIQKKGSSGAGSADAVEVRFVMVIGAAGVEQSGFSVTVPEAQVPGGAIKVKDLVVTYNPPEIAMGAVFQMGEGKGIGGSFALYDGNFNGLSLRGTDLGWRLGASGSTIDKLDVGFFNVQNPPWYIEGGFTVLVGQTRVAGKWPLEVEAR
Ga0255248_1019068	Ga0255248_10190681	F085216	GQWWVPNGIGRKHVTHRFVKFGFAGIAASLSLGSLLAGCGGGGVDQDYLDSSSRALIGTYSKTSISALGTRVTCGDASSVVGDPKTELKDRNVVIDVCTPTDTITFSEDGRYAIKSYGGTEAGTFTRDNQRLELVRDTENGTALSTPYQKTVYTLSGNSTDLVFTPTAQPVGYQKIDPAGAAFNVDNTPNYDNLAPKANLDGTLAILWLPNADCKPVLKSNLSIVPELIADAKEAIDARGFSKRYVVTYTFGKK
Ga0255248_1020294	Ga0255248_10202941	F086577	RAELMRQQAQNGSVLLLGNVVDALRIDGFNSKVLNPGVAGLPDFGSFGLTDLVTEMAAPANGSSFARLKTLGATVIATQSWTVIGDVRVVSFAFSVLMETDAAGNRKFSGSVQGSISIGRFTFGAYVPFNKPGSQMEFVLPEVTVNGVNVNELFGVGTTVSVGADDVENLLAGAGAEVTARVKAELAQKAAELKALAKEQLRANLLAPLQELQARAELMRQQAQNGSVLLLGNVVDALRIDGFNSKVLNPGVAG
Ga0255248_1020453	Ga0255248_10204531	F023359	TTVAYTLEGIKTTVSTISDPSTLRQSIVESYSTYDSNSGGMVKGYFKTSQAFVVIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAGLVLLSAVIAFLSFLGLPSAFKEEIPNCVDGPCREFSNSLKSPDLIEVQNGVSYTLVNTRAWGPVEGWFIILGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL
Ga0255248_1020809	Ga0255248_10208091	F100333	LIAAMAVDWYSYKVEFSYTRVTALDSSLASSLYNYTQTTFDMFGQTVHVQSANTKIVRTTQQTYAQLGASNVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLIVVASEIIAFLAFSVFPTRSPLTAPTASAALARSSLTP
Ga0255248_1021601	Ga0255248_10216011	F003495	MKENNEKKMKYCDEISKLIKAFPKDIAALDKRSVLAKVN
Ga0255248_1022257	Ga0255248_10222571	F001583	ILKKIYLKNYVTSESDGXLLGGYAFFXFHYIVMLGISLSATHLSDLTLTIIANVFXSLFNFTFKTYYIIFTNKHLNTDQLTRLMVLHYFTPXYYLYLVKLHALFCHESXDSDSGESIYEDKSGSYVSXFYDAFLKEIQDAXYXTSLVFVYFFMHHFNGGPVNYFFFERXNISEMDEIRFYGVAPHXYFRPLMGLLVVSPSHYEGLMXMGLXFILLAALPVIYNFYNSNNSYYSVIPMQSSKLQ
Ga0255248_1022273	Ga0255248_10222731	F025928	EAQKGGNMSLLNGKKGKDLGFSDFVSSAVRGLFMPYFSLPIILLGVGVGYATDLVLKPLLVTGFTQAGSIGAAVGPIATASGISIVTGIFIAVYGQIYGTLATSAKTGTPTIGEAFALIGQRGLSVFAAGLLVTLATVGIFIVGLIVVIGGAVAANAGGVTTGLFILFLVVYLYLTMRLGQAGWFAADGMGAIDSIKASWSRTQGHLMKILLWSIGGAFVFTAVGLLIGLLTSSLPSGIASSI
Ga0255248_1023008	Ga0255248_10230081	F025755	ETMKRLVKTIGVLSVASLMSTSAFSQISVSGYAEVGFMAGSTNGTRSTGAAKNLGGESVITVAGKGSLNNGWTYSAYQNIDSDEVNNGREIANASPMTTRAIVLSPNANFNLFYTYDGVYGGEIARTAVPTLTERVVDLTGATTLAEFIDVTSGTHAVGFDVLNVGPAGRLSVAYAPNLDATQSQSSDRLYSGTAQAGINSASGYSIGYSVTPGPIKIAAGYTKIDAKQSTTAMDPTSR
Ga0255248_1023400	Ga0255248_10234001	F070166	MNLHDYVVHIRRSTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCHTDIHFKEKFGKSLEELAKILKECNFSRGLQSSAIKSVRTKVLALEGDFLIPQRNLPNLEAQLRNSIYTKWRRPQGVENSKLPPKKHIGRGYRDHGTAPKPEIDGSPSWQEVGSEFSNLEREDTENLLYLLKVVSGEANDDPKEIIKRIKRTIQVIEAIKRIDPNWRNSEVAEASG
Ga0255248_1024518	Ga0255248_10245182	F085156	MIGLAGEEELKEDRSARRSADGPLGGKLGIAGCNAGVDESFQDNIEIS
Ga0255248_1026324	Ga0255248_10263241	F066466	ARLAKIGATEPVVIAMHLDFSARSTWWDQPKRKAFYEAIKGHNIIALLHGHTHDITRLRFPEDKDYADFGGTGPRFDCFSAGAFKPDAKEGQPFPGPRYPCECYVFRIVDDVLVAAHYTAEPGGWNTSKHAPQLTFVKDIKVK
Ga0255248_1027139	Ga0255248_10271392	F014605	MKVNLAIEIKDIEGNSIQGEPMLLSKLVGNALFTAEEKDVPIRVYELAKKIYYSEAEIEMTKSDADLIKEKVKAKGFTVLVLAPLFEALSEK
Ga0255248_1030937	Ga0255248_10309371	F085216	WVPNGIGRKHVTHRFVKLGFAGIAASLSLGSLLTGCGGGGVDQDYLDSSSRALIGTYSKTSISALGTRLTCGDASSVVGELKTELKDRNVVIDVCTPTDTITFSEDGRYAIKSYGGTEAGTFTRDNQRLELVRDTENGTALSTPYQKTVYTLSGSSTDLVFTPTAQPVGYQKIDPAGAAFNVDNTPNYDNLAPKANLDGTLAILWLP
Ga0255248_1033622	Ga0255248_10336221	F021094	SAAAALSAQSAGSPKMSYDFIRAGYVQGEEIKGIAVSGTALLGEHVLIGGSYQDLTARNLDDVDGEASTFNLGARFGVGSGDIIIGASYGQLQGAGFDGATAVAVAANVTSLGIAYRHSFNETWEAFVSYDRVRTEYAAGSYDLSTGLALVGADSQSDNQFGVAVRCNVSKEIDVTVGYAWIDGDGAFSISAGYNF
Ga0255248_1033657	Ga0255248_10336572	F054859	MSNENLEKAIAAGTTATGTFAGVTGVAGQHKAGEAGKAGLQNAEQAARFLDYMYDATGSGKVARTARMKADTSE
Ga0255248_1035344	Ga0255248_10353441	F026277	TESGKKSILSQARLYPEEVLMTESQVEHFWSTRNLKKNESVTKKLVSHEALIQEDKLSDKEAQSILERFRNI
Ga0255248_1036398	Ga0255248_10363981	F003666	VRIHGGEFGESARAIHRTESEESDSSRDWEILELD
Ga0255248_1038303	Ga0255248_10383032	F025295	GNRPGKATELLRRREVLIPKKLKFITRKSNLQKPI
Ga0255248_1038375	Ga0255248_10383751	F050328	ISADTLTAGATCSESGFVKANVTSHAENPDAALNTSCPDDCVHVPLGSSRAPEDTAKLLPAVCDPVSPVMVTVDPAARSKLADSETVNVLVAPDPGVLCRIDFRVKLGTTTVSGSAPLATPNRAPPGFVISADAIEPTLLPLPSSISADTLTAGATCSESGFVKANVTSHAENPDAALNTSCPDD
Ga0255248_1039342	Ga0255248_10393422	F103246	MSRQITVKVATNKVIKALEARLATLENDYNTQTAKE
Ga0255248_1040260	Ga0255248_10402601	F020340	VRARDGANNLLTGADNSNAGTDYVTVTVLEAAGTVVDANLLGTKQLFLSGGEKNFADLGLQGDAGTHFRLHFTYNTLTVESNEFNVKPHHMHVSVHPSDGQYGSGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGTKGLFLSTGARTFADLGLQGDA
Ga0255248_1040544	Ga0255248_10405441	F064416	HLPYVCLLTLGSASAFAASAPSSLFASNVEVSYVQQSTDGIAGHLNGWELSATAYLGKSDAFVNAQTSVGGDLGNGADAVSLGYRFKNVASIADVALTVGSDESYGLALHRALGGGFGAWASYERLANGHDVTFVLSKMIVSNVSADLGYSWINRDGAADANQWSLGVRYKF
Ga0255248_1041170	Ga0255248_10411701	F095375	KSKTKFLVKGISAADAHAAALRMLTANPSLDHLRPLLSPASFVVNGYIGLGVPIGTDAFIQHFVKDKCQAIMDDVDKLDNIQDGFIHYQLLRFCQATRLQYLNGQIDQANQNCLQQQHVDFKIANALLKKGTREAYKTWTQQDRAWVDMRLHESHEEGGFGVSHNMITRHAASYTTNAR
Ga0255248_1043324	Ga0255248_10433241	F019993	KLLLVAGVGYLGFKAYQIYTAIKKLSYAPTGIRFTLNKSRGAIGGTLFVDIINPTAASITVDGFTGTVTTTDGTLIGDYRGDKLILKPGVNNVRISWGSRSSLTLVNLAIGISQGKFPVLSFNTVYNIKGFPIPTSFKMDTKAYKPTFI
Ga0255248_1043727	Ga0255248_10437272	F047509	MSTVPLHLELPADEVESLRAFAIAHGLTMAELVSRWAQSLKAANRSGLSAIHPDVIAITGLVPREWTDVKTEHRRHVLTKHSQTPGEGTVPTAHHPAHTVTL
Ga0255248_1045137	Ga0255248_10451372	F043244	MANSIANAPAILAESVIASLKGKLPALRAFSSVFTAAESGAGKTVQVPLIGTSTATEFSTGGYLTQDDATITAANVTLKHFKVSSRFSPLDVKMYGAQFLSNAFVPTAANALAEKCLA
Ga0255248_1046283	Ga0255248_10462831	F001583	LNTDQLTRLMILHYFTPXYYLYLVKLHALFCHESXDSDSGENVYEDKSGSYVSXFYDAFLKEIQDAXYXTSLVFVYFFMHHFNGGPVNYFFFERXNISEMDEIRFYGVAPHXYFRPLMGLLVVSPSHYEGLMXMGLXFILLAALPVIYNFYNSNNSYYSVIPMQSSKLQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025742: Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_8h (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences