| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300011299 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123883 | Ga0138294 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D5L_HD (Metagenome Metatranscriptome) (version 2) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 53483942 |
| Sequencing Scaffolds | 7 |
| Novel Protein Genes | 7 |
| Associated Families | 7 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 1 |
| Not Available | 3 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1 |
| All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Austria: Klosterneuburg | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000344 | Metagenome / Metatranscriptome | 1257 | Y |
| F017318 | Metagenome / Metatranscriptome | 241 | Y |
| F021769 | Metagenome / Metatranscriptome | 217 | Y |
| F059886 | Metagenome / Metatranscriptome | 133 | Y |
| F075814 | Metagenome / Metatranscriptome | 118 | Y |
| F104545 | Metagenome / Metatranscriptome | 100 | N |
| F105419 | Metagenome / Metatranscriptome | 100 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0138294_1021024 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 1068 | Open in IMG/M |
| Ga0138294_1021679 | Not Available | 514 | Open in IMG/M |
| Ga0138294_1021829 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia | 831 | Open in IMG/M |
| Ga0138294_1042150 | Not Available | 534 | Open in IMG/M |
| Ga0138294_1043760 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 630 | Open in IMG/M |
| Ga0138294_1063386 | Not Available | 988 | Open in IMG/M |
| Ga0138294_1076218 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 880 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0138294_1021024 | Ga0138294_10210242 | F105419 | MRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPE |
| Ga0138294_1021679 | Ga0138294_10216791 | F075814 | NESVNRPTKCFDTREVGVVQLGTGKYDVTVSVMPHSSFNQTTRLTLKSVDPASVPAVTGGTLVENVVFSLDAQSSCDGAAVAPLPNLVNLGVIYNTAPALDKSKLQLVFWNGSAWTNIDTTPDPVPGNPYVSSTISQPGTYALIVKP* |
| Ga0138294_1021829 | Ga0138294_10218291 | F000344 | MRPKHPHAAESGVGKHTARESERAQACATGKERVANAHSHKLAP |
| Ga0138294_1042150 | Ga0138294_10421501 | F059886 | VIYASRTAFADLRGERHQLSPTIPRSPGIIPAVLSVAPFRPLRFDC |
| Ga0138294_1043760 | Ga0138294_10437601 | F104545 | MTAKGVRVGKDQPIRTCTAQHAQQRIVGQQAGIDCDAATRAVRVPTASGQPDVEPVDTILRSGGRRKTFRDAPASRGRVRQRLEMAPVANPFRHAVIKVAAQ |
| Ga0138294_1063386 | Ga0138294_10633861 | F017318 | MGIPLLAAPLKFERTVEGLFDISCDGINPSVGLFNFSLSDLPNNSDFTNLFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYISCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR* |
| Ga0138294_1076218 | Ga0138294_10762181 | F021769 | KNLKLELFNFKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLIS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |