Sample 3300010229

3300010229: Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1

Overview

Basic Information
IMG/M Taxon OID	3300010229 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121424 \| Gp0154112 \| Ga0136218
Sample Name	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1
Sequencing Status	Permanent Draft
Sequencing Center	Fidelity Systems Inc
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	97686437
Sequencing Scaffolds	55
Novel Protein Genes	62
Associated Families	59

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3
All Organisms → cellular organisms → Bacteria	17
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	3
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1
Not Available	8
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil
Type	Engineered
Taxonomy	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil → Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Bangor area, North Wales, UK
Coordinates	Lat. (^o)	53.24	Long. (^o)	-4.01	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001203	Metagenome / Metatranscriptome	748	Y
F001213	Metagenome / Metatranscriptome	746	Y
F001519	Metagenome / Metatranscriptome	679	Y
F001605	Metagenome / Metatranscriptome	664	Y
F001752	Metagenome / Metatranscriptome	642	Y
F002279	Metagenome	575	Y
F002755	Metagenome / Metatranscriptome	532	Y
F002821	Metagenome / Metatranscriptome	528	Y
F003843	Metagenome / Metatranscriptome	466	Y
F004294	Metagenome / Metatranscriptome	445	Y
F004465	Metagenome / Metatranscriptome	437	Y
F005370	Metagenome / Metatranscriptome	403	Y
F006205	Metagenome / Metatranscriptome	379	Y
F010130	Metagenome / Metatranscriptome	308	Y
F013795	Metagenome / Metatranscriptome	268	Y
F016259	Metagenome / Metatranscriptome	248	Y
F019257	Metagenome / Metatranscriptome	231	Y
F019376	Metagenome / Metatranscriptome	230	Y
F020632	Metagenome / Metatranscriptome	223	Y
F021889	Metagenome	217	Y
F025813	Metagenome / Metatranscriptome	200	Y
F025945	Metagenome	199	Y
F026845	Metagenome / Metatranscriptome	196	Y
F026847	Metagenome / Metatranscriptome	196	Y
F027649	Metagenome / Metatranscriptome	194	Y
F030257	Metagenome / Metatranscriptome	186	Y
F031478	Metagenome / Metatranscriptome	182	Y
F039059	Metagenome	164	Y
F041056	Metagenome	160	Y
F043351	Metagenome / Metatranscriptome	156	Y
F050030	Metagenome / Metatranscriptome	146	Y
F052119	Metagenome / Metatranscriptome	143	Y
F053534	Metagenome	141	Y
F057569	Metagenome / Metatranscriptome	136	Y
F058341	Metagenome	135	Y
F064003	Metagenome	129	Y
F064158	Metagenome / Metatranscriptome	129	Y
F065625	Metagenome / Metatranscriptome	127	Y
F068106	Metagenome / Metatranscriptome	125	Y
F069233	Metagenome / Metatranscriptome	124	Y
F071512	Metagenome / Metatranscriptome	122	Y
F071587	Metagenome / Metatranscriptome	122	Y
F072794	Metagenome / Metatranscriptome	121	Y
F076414	Metagenome / Metatranscriptome	118	Y
F076628	Metagenome	118	Y
F079000	Metagenome / Metatranscriptome	116	Y
F079792	Metagenome	115	Y
F083420	Metagenome	113	Y
F091497	Metagenome	107	Y
F092270	Metagenome	107	Y
F092504	Metagenome	107	Y
F095242	Metagenome / Metatranscriptome	105	Y
F096021	Metagenome	105	Y
F098273	Metagenome	104	Y
F100679	Metagenome / Metatranscriptome	102	Y
F101371	Metagenome	102	Y
F101373	Metagenome / Metatranscriptome	102	Y
F105394	Metagenome	100	Y
F105807	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0136218_1000009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	49585	Open in IMG/M
Ga0136218_1000012	All Organisms → cellular organisms → Bacteria	42663	Open in IMG/M
Ga0136218_1000013	All Organisms → cellular organisms → Bacteria	41886	Open in IMG/M
Ga0136218_1000041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	29628	Open in IMG/M
Ga0136218_1000095	All Organisms → cellular organisms → Bacteria	21523	Open in IMG/M
Ga0136218_1000115	All Organisms → cellular organisms → Bacteria	19885	Open in IMG/M
Ga0136218_1000194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	14825	Open in IMG/M
Ga0136218_1000229	All Organisms → cellular organisms → Bacteria	13182	Open in IMG/M
Ga0136218_1000288	All Organisms → cellular organisms → Bacteria	11160	Open in IMG/M
Ga0136218_1000617	All Organisms → cellular organisms → Bacteria	6575	Open in IMG/M
Ga0136218_1000660	All Organisms → cellular organisms → Bacteria	6248	Open in IMG/M
Ga0136218_1001107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4075	Open in IMG/M
Ga0136218_1001241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3736	Open in IMG/M
Ga0136218_1001332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3509	Open in IMG/M
Ga0136218_1001364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007	3467	Open in IMG/M
Ga0136218_1002139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2453	Open in IMG/M
Ga0136218_1003035	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
Ga0136218_1003154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1871	Open in IMG/M
Ga0136218_1003716	Not Available	1690	Open in IMG/M
Ga0136218_1004287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1553	Open in IMG/M
Ga0136218_1005024	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
Ga0136218_1006017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1302	Open in IMG/M
Ga0136218_1006967	Not Available	1189	Open in IMG/M
Ga0136218_1007512	Not Available	1132	Open in IMG/M
Ga0136218_1008607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
Ga0136218_1008940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
Ga0136218_1009141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
Ga0136218_1009224	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
Ga0136218_1009284	Not Available	988	Open in IMG/M
Ga0136218_1010124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
Ga0136218_1010840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
Ga0136218_1011817	Not Available	882	Open in IMG/M
Ga0136218_1013674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
Ga0136218_1013817	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
Ga0136218_1014471	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
Ga0136218_1014611	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
Ga0136218_1015296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
Ga0136218_1015513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
Ga0136218_1016009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
Ga0136218_1017549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	775	Open in IMG/M
Ga0136218_1017934	Not Available	769	Open in IMG/M
Ga0136218_1019198	Not Available	752	Open in IMG/M
Ga0136218_1019904	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
Ga0136218_1019997	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
Ga0136218_1021881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
Ga0136218_1022280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
Ga0136218_1025056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
Ga0136218_1025354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
Ga0136218_1025525	Not Available	675	Open in IMG/M
Ga0136218_1025602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
Ga0136218_1028228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
Ga0136218_1028782	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
Ga0136218_1028873	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
Ga0136218_1029515	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
Ga0136218_1030868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0136218_1000009	Ga0136218_100000948	F016259	VSPFTTAKLALMLIAAILLAWGIRADDAALRWAGIAFLFIALVLRFFKPRKPRGL*
Ga0136218_1000012	Ga0136218_100001215	F092504	MVVRGPGGGGCDCDEDFNHARWFPPDSFEIAVAHRNTTGTWERFSGKASVARVHVDTLTDEPDWH*
Ga0136218_1000012	Ga0136218_100001216	F030257	MISPRTRGALFLLGAVAVVASGACSRDDNEAATQIRVIDSTYTSSWAPMEDTGIVYRIEVVSPVGSDTIRNVIPPAPIVVGDTLVIGLVQASEDSSTPQRQIFRLRLGQHRVETTPLPDDVWPS*
Ga0136218_1000013	Ga0136218_100001316	F001752	MVSRLAIAAFIAAPCVGLAQAPWRQVYKDSDVRVLFDTASIALQSPGTWTTVTSWDYNRPRILENKKAYTRLVERAYVRCSPVRVKRVRSTVYAGNNQLVRDEGEVDPRDQAHMVWDRPKPRTAGKNAFETVCGILTKRAKGSASASKKAGSAEASNKAAATRKSGAKN*
Ga0136218_1000041	Ga0136218_100004130	F079792	MIDAAAWARRCHIEAARAIHPSTKAFLLELAAEFEAICGEAVNLDPNDTELQSAVADRLAEVAAKKREWLR*
Ga0136218_1000095	Ga0136218_100009525	F002821	MAGCLKSTEPQPSSLQLDGTWNYTGEQTGPVRETLAGTLTISGESGTSFQGRLELVGTNTQTGATRALSGLVSGAQSGAVVDFDATIETTPRRHVGQIKADTITGTWVGDGTGGAVASGTFRVEREAR*
Ga0136218_1000095	Ga0136218_100009526	F064003	SGIAAVQVDLSKAHVIARDGEGREWAALMTGPTTATFQSLPVGTYKLDFDLSELSEPLVARAPIPNLVVTGKDSKSITITLDPRPIRMWTPPANKTTPKTDAPPPAAETGSRQ*
Ga0136218_1000115	Ga0136218_100011510	F041056	MVRIFCAAVGLQLLLLGSASAQQAPPLKIRGDTTGAPRGCSAASGISAISAWFRAFTDADSAGLAKASSTPHGRFVFSVGKFATSDTFIRGRTFEDLLAYARDRARQRERMTVQEVRFTGWSGQVLEWDRLYFTRSANDLGDTPLRGVGKGGYWCRQGVWYLHLAPRSDIDPRRR*
Ga0136218_1000194	Ga0136218_100019410	F098273	VTASASPPQLWHRPAETMEDRAREIELFEKEQRSQKRALYLRYGAEYLLWFAVGGFLLFWSFHTTDPRYAKLAFWSGIGLGDGGMLMAMIRGRQEGERRGIL*
Ga0136218_1000229	Ga0136218_100022916	F021889	VAXXXXATHEEELTLIRADSELFAAVVRAQLDGKDNEYPYHLDRYRFDARPYGTENGYPEVFAGVQGIDPTLSFARAGQSAIDELVDNRKKILDAAAVGEGGPLVYNQCAGAKVPEPPPVRGNRRRTSVHAGCPKQPEYYLTVGLPIRGQPRGLRGARDTKGRRVDLGGDVWTVLVNEFSAAPRGWSKAQYAWLFRRGRWNHQLELSNTILVGVIE*
Ga0136218_1000288	Ga0136218_10002885	F064158	MNAAFGVRFLPEDLRRLLFRPPFFAAFLPLDLDDLREDFRAEDFLPPFFFVAILSPGLVIGCKLLQGETCSVSDANYSPARRKQ*
Ga0136218_1000617	Ga0136218_100061710	F019257	VRLAARGQRDMDTGPEQISDAEELRMVQRQARAVYVKAIITAAILTAAALVF*
Ga0136218_1000660	Ga0136218_10006604	F091497	VKDSSREPVSLLHDFVAQQHANVFMRAFSFETSLLPAGADSNAELADRVMIMDGIGFIFQLCEREPKVTSKAGDLEKWVQNQVARKGAKHIQNTRELLSGYMGLSIVNHFGHRVTVTPHDPDSFVSLIVYRVPPKSRQFRAPRFKRSRNGGFVHILHDVEYFEICEHFATPAELMDYFEFRRDLLLDWDPASAAVSESALIGQYLMEDFSSAPSPRFESAAQAHVGARACEFSFVLDSLAAKIAHQEGEWADGEYYEILSELAWLGRHDLRALKFQVRCALEAVRSNRFDLPYRIASTRTGCGFIIVPVTREFQDRALDALRSLTEASKHELDLERQVGIAMWQDSEFVDIDWVFIEGENAPDPALDERLARSYPFRTSSEQRLAPVFT*
Ga0136218_1000660	Ga0136218_10006606	F003843	MKLSALLALALVSAPIQAQDSTGMHVSVHVPDSVAHIVDRESASHSRFTIVSRDGQAQLLLMDTTIVAQLTDRGLARMDSREATDSIKGTANRIFARMAIGALIPLFDHGIAYHLRDLADARYADGRLQLLRANGDEVFRDVEIGKGPLMESFSPADAMAFARRAREARARLR*
Ga0136218_1001107	Ga0136218_10011072	F053534	LNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTTVGWGMIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH*
Ga0136218_1001241	Ga0136218_10012413	F004294	MECWLITSRAEVMRLEFGEQPPPEICLPDKPLADIEDNAIHKAIQDAPYIIYRRYHLAHESWRLGIVYSIAPPTVGDIQILSAYRAGHEARPHLV*
Ga0136218_1001332	Ga0136218_10013321	F004465	GGAYFGGTATSAAPLQGFTPSQNVTVVVTDDPGPPPSWSATATHTQTAKTCDMTNGVITCT*
Ga0136218_1001364	Ga0136218_10013643	F068106	MTTIVAVALGLAPIGKDGIVQPVNAKDAHEIGRYSETVDDTGTTHLQGINRRTGEVFHLTVNPFGRVEGSVGNWVVTFQVSETA*
Ga0136218_1002139	Ga0136218_10021391	F025945	MAGFLGLAFALFRQDPRLERRAFAWVGLTATLMLVGFNIRQGLDTKDKNRARDDLQAAHSAEIARDRDTISAALKENPQRQSAWLDSAIRAHRDDRAFLLAALPNDSISPSLLDTLASSDDMGIALEAVRNPNTTAQTLERVYRTKSYPDYFFQALAAHPHTPPDVLTEMYKRPRTIGGLAIWFAGNPATPHEILDDIARTNSDRSVISSLLENPATDCRIITRLAVNLMKGQNRDAEDTNVARLNELLPLKCPNTT*
Ga0136218_1003035	Ga0136218_10030353	F058341	MKTSFPSFVLRSGAIGLCILASIAPQRAFAEVQTDATCTSDSKLINGGPTEVFGNAPGTYWNLIEGGLQSAFGDDEAAKIQYLSGVFGQQFTTLDAARDYNLQALSTAFDKNQDGLVCVYDLRGTRANLRDPYSKYTYFSVSDDKITKKADDALQFRSAPGQXXXXWLASAFHPFRTLAQPRNPLAM*
Ga0136218_1003154	Ga0136218_10031542	F027649	MGSSPHPPQKPAAAKKEDANMAYGLNPRLFVEHGPAIQAAAAHSRSSSDAFRAWAGLDAEHRLELIEKALREAANDSSELPIAL*
Ga0136218_1003716	Ga0136218_10037163	F100679	MIVLVSLAIDKEGVVHGMLQVERRLDPTRQLFDTAPVVARAEGRSKDDVLKKLRTLAENDAELSAKLAEWEAXXXXXXX
Ga0136218_1004287	Ga0136218_10042873	F092270	MRSTDVPTELVCGKTGGVRGAMIEGGRYVTVDRYIAGQMRLTTGIPGVRLAQKFGERYRLDVGLEPRFLFGNPEDLGITHPTVRTGVFGAFLTRWWDW*
Ga0136218_1005024	Ga0136218_10050242	F006205	XDVMDDLKQTLEKLRDELTKAGKRLAELAEKAEAELPSAGKRINEEYLRLQALLDSAVDKLRNK*
Ga0136218_1005024	Ga0136218_10050243	F004294	MECWLITSRAEVMRLEFGEEPPPEICLPDKPLSEIEDNAVLKAIQDAPYIIYRRYHLAHESWRLGIVYSIAPPTVGDIQILSAYRAGHEARPHLV*
Ga0136218_1006017	Ga0136218_10060171	F002821	MKRVARRRAYRLIGLISLVGPVMSSACLKSTEPQPSTLQLNGTWNYSGVQTSPVRETLTGTLEISRESGTSFQGRLDLVGLNSQTGQTRVLGGLVSGSESVTDVIDFDANLLEAAPRRHVGQIVADTITGTWIGEGSNGSMASGTFRVERETR*
Ga0136218_1006017	Ga0136218_10060172	F064003	LAGTRVSRSVSEIELVVAPRSGISSVQIDLSKAHVIARDGGGREWAALMTGPTTATFQALPVGTYMLDFDLSELSEPLVPRGPVPALVVTGKESKSIIITLDPRPIRMWTPPSNKSGAPNSPPSSGASPATTGASGS*
Ga0136218_1006967	Ga0136218_10069673	F079000	XXXXDDWVLELLEDGDPEGRVPLEPGTVADAAFHAYARGAVDYRP*
Ga0136218_1007212	Ga0136218_10072124	F105807	XALVSSDNPAAVALLRRVLSRLDIRHEGPELTIRARAEPRF*
Ga0136218_1007512	Ga0136218_10075122	F019376	MKDLKVQSRLAIQSPMRSVSLQIRDYQVTVKVRTAVPQARPAAVRSFVVR*
Ga0136218_1008607	Ga0136218_10086072	F002279	MSSVPITAPAPEWARLVGDSLKQNGVWHTYSKLIEARNTYPNDLSLRGYVEIVRNAIVREFLEHPKGMQSVPKLSAEFLTNFDRFNLSAQEGFLVSLIDGRMDISKLMILSPFDPFTTLFNLAKLENERAITIPS*
Ga0136218_1008940	Ga0136218_10089401	F001519	MTLVNSLCAEISIYQGVGEQTGVVVERSAIRGKKGLCKSMRDLAIKSRVLGDGYYYIPIDLWPKSKEPVVVHKHDWTVIGSIPRTSRSTKKQAKAAVR*
Ga0136218_1009141	Ga0136218_10091413	F069233	VPAAADYEYELRHDGAVIATGRLQLEEAPSPGDELALGSRRALVEDVLPLRGGKRLILEQA*
Ga0136218_1009224	Ga0136218_10092243	F002755	LTGVVLAAGSFAGSVFYRRRAARRRERVDLYFEDGSLVSLAEGSPGAERLLPLAHDVLHAAG*
Ga0136218_1009284	Ga0136218_10092843	F001213	GEEIRVRVGTFLRFDPGTTRQPVAGPDGLTMIGIGARRGSYEPRGPF*
Ga0136218_1010124	Ga0136218_10101243	F039059	MTVTETTTNRLTDQQLGLMIQYTVEAYKTFEKLAENLPNPMTATMFKQFAVDERENRDLIEMKIAAGAAARVRVTLGGXXXXX
Ga0136218_1010840	Ga0136218_10108402	F065625	MLRAAGGDPYGPRDLDEWRVRHSGLHPHTTLLSALRAQYDELTLEWVPYFHRWLGGPSSEALEQTLIGAGAIPAIGYRWAGASTSTTRSSAPSR*
Ga0136218_1011817	Ga0136218_10118171	F013795	LARPTSSDLLKVLKLTNPRAVQEPNAHIDRHIPRRSLYARLWEEVKAS*
Ga0136218_1013674	Ga0136218_10136741	F095242	MASTAVAPHRAVIRDPVLLLPLVVTAGLAVGWLAVREQVSGPRIAADLALAWSLAAASLVVLERPRWRQVRWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVLTFPEGRPWSRPARIAVISAYVLTLG
Ga0136218_1013817	Ga0136218_10138172	F101373	XFHTLIGAIFLVIVVVSPGGLVGLWERLVNLFSGTRRDPLELGPAEPSV*
Ga0136218_1014471	Ga0136218_10144712	F001203	VSAENWHEERDRLVRLLKAIETGKVTHVDEEDLRELQAATPENIAALKQRLAELNDRLSQG*
Ga0136218_1014611	Ga0136218_10146112	F026847	MAQATLQNQKAIIANQKVITRNQSRILKNQETMLRNQKRILANQARILXXXXXXX
Ga0136218_1015296	Ga0136218_10152962	F096021	MISSAAERMIEMIHEIFQVAANQAVESEKIVHTMEQVRTIAEGNRQSGTEMSDSITLLSDAIRSLDEEVRKFRVN*
Ga0136218_1015513	Ga0136218_10155131	F101371	MEHENSILFRPVNALWHSVQHVFPWDIPDHIIMALLVLAISAIVFP
Ga0136218_1015513	Ga0136218_10155132	F043351	MIAFLWLEEIGELLLQPAAHLHARRLLWRTLARFALLGVALLVLIFVARFDALSVLLGFSIVVVGIMGEALYSAFRGLSGS*
Ga0136218_1016009	Ga0136218_10160091	F025813	MHALHQVLHAFFNLHSFTLAMPDVWAGFRVNLRMMVIAEVLVLVFA
Ga0136218_1017549	Ga0136218_10175492	F050030	MPRTPPPYDDDDPLAAFELPPEIMSQTLEHAIGDDATVSHELGHTVAARLQQALKGSTVEYGFPGIVTVHLKSGAVARCGGPSLGWMIDVVRRPGAETDTVDVDVSDDERDPALIVEALAKVLRRR*
Ga0136218_1017934	Ga0136218_10179342	F071587	VLDLKGHGNNNATALLGGWNEWTALGLPVEKTKLK*
Ga0136218_1019198	Ga0136218_10191982	F005370	XXXDTTAPRRPGGKRAPQPRPEEMGLVEAEADLIRVAWSKPQRPLY*
Ga0136218_1019904	Ga0136218_10199042	F010130	XGNAFPMRHPELLPAIAGGFAVALAHLRWIMLTQWTCKTCGTTHLHCECKPAWVRKLL*
Ga0136218_1019997	Ga0136218_10199973	F057569	WRFFNDTFVRALGIVTFAGIVIAALSAGLGSLLGNPGAG*
Ga0136218_1021881	Ga0136218_10218811	F076414	XAGGGFAKSGAQGGTLNVDLPNDVDYTDPALDYLSTGWEIEYATCLKLMNYPDANGAKGSQLVPEAAVGFPKVSNSGK
Ga0136218_1022280	Ga0136218_10222804	F052119	MHASIWRFRGDPDELLGSYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFDAFS
Ga0136218_1025056	Ga0136218_10250562	F072794	XGCLELFYRPFRLVPVAVVLLLVATVMSRDQQRLVKIGFAAAGICFVAGAALQVITHHPLY*
Ga0136218_1025354	Ga0136218_10253541	F105394	XXXAVKHNPNDSKALFALARVASRNPAWFRQAVQAVEAAVQKEPMNPQYLKEAGLICKKAGLPAKAERYLEQALKWDKENIEIQSALAELRQGKGETKDSGKGLGLFRKS*
Ga0136218_1025525	Ga0136218_10255252	F071512	FALARYADTIDVCRETIATHPHHAGAWRLMTVSLALLGKTDEAKVALARTLSLQPDLSISHVETNTVYAKPEDRXXXXX
Ga0136218_1025602	Ga0136218_10256022	F031478	MPSGDTPEKAQAYYHYLQAHQQTMQEPATWHVRWVDLAWLWGFVVVLSVTLLWWVWQYRTTRQKXXXXXXXX
Ga0136218_1028228	Ga0136218_10282281	F026845	MRGDGSPIKGRRGFVIGELLIALLLLAVAVSSLAALMYSVSRRPIGRADTECVASAAAVGKCVPAKPAVDAPSKLLRSGCATRSVFDQRPCKDTLVADDTSGDVVVKARTDSAALALLAKKQQAQRAPERPDLGFVR*
Ga0136218_1028782	Ga0136218_10287821	F001605	MPTQTASEPQTLAQVPFKTLEEVIRQLRSTRNDIIRFGVWNVRNMTDDEFNHTEDRKLLGYFRQDLLETRFLSKGRRIDLIQLWKWFDDQMSGVEPMLIDNQELFLNIQDKDLEKVRKRIEEIQSFLPTLRGDDLEAFKRVKYKLRRTVMRLTYDLHHLFKRLEKYRKNTFGSSVEPRPERLALEAVAEIPEPPPMDD
Ga0136218_1028873	Ga0136218_10288732	F020632	MLGYIGTTLYHRSDIPRDLVMPPVVATIPEPEFAPINTSTPAIVASVSAGLSIWPAALFAEQAPVRFAHSKLELTNYTR*
Ga0136218_1029515	Ga0136218_10295152	F083420	PQIDAPNTPAVPAAPKQSAVPNETQLLEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGMAIDELDLELLD*
Ga0136218_1030868	Ga0136218_10308681	F076628	LANKTELESAFDAAISQVGQCVGAGMKAIGGESAVPYLEKLEHELELERGRALERGSVDREWFQRTARWLIEWVPEDELTLIAALGRIVRAAPTALP*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300010229: Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences