Sample 3300009798

Overview

Basic Information
IMG/M Taxon OID	3300009798 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114663 \| Gp0127627 \| Ga0105060
Sample Name	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	44420984
Sequencing Scaffolds	68
Novel Protein Genes	74
Associated Families	74

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → unclassified Candidatus Nitrosotenuis → Candidatus Nitrosotenuis sp.	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3
Not Available	24
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6
All Organisms → cellular organisms → Bacteria → Nitrospirae	2
All Organisms → cellular organisms → Archaea	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas → unclassified Defluviimonas → Defluviimonas sp. 20V17	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Groundwater Microbial Communities From The Columbia River, Washington, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand → Groundwater Microbial Communities From The Columbia River, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river bed → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	USA: Columbia River, Washington
Coordinates	Lat. (^o)	46.372	Long. (^o)	-119.272	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001424	Metagenome / Metatranscriptome	698	Y
F001663	Metagenome / Metatranscriptome	655	Y
F001799	Metagenome / Metatranscriptome	632	Y
F001808	Metagenome / Metatranscriptome	631	Y
F001947	Metagenome / Metatranscriptome	613	Y
F003662	Metagenome / Metatranscriptome	474	Y
F004741	Metagenome / Metatranscriptome	425	Y
F005585	Metagenome / Metatranscriptome	395	Y
F006941	Metagenome / Metatranscriptome	361	Y
F007214	Metagenome / Metatranscriptome	355	Y
F007705	Metagenome / Metatranscriptome	346	Y
F008079	Metagenome / Metatranscriptome	339	Y
F008534	Metagenome / Metatranscriptome	331	Y
F008878	Metagenome / Metatranscriptome	326	Y
F009436	Metagenome	318	Y
F009734	Metagenome / Metatranscriptome	313	Y
F010980	Metagenome / Metatranscriptome	296	Y
F011582	Metagenome / Metatranscriptome	289	Y
F012064	Metagenome / Metatranscriptome	284	Y
F012785	Metagenome / Metatranscriptome	277	Y
F013868	Metagenome / Metatranscriptome	267	Y
F014613	Metagenome / Metatranscriptome	261	Y
F015726	Metagenome / Metatranscriptome	252	Y
F016803	Metagenome / Metatranscriptome	244	Y
F017192	Metagenome / Metatranscriptome	242	Y
F019097	Metagenome / Metatranscriptome	231	Y
F019112	Metagenome	231	Y
F022257	Metagenome / Metatranscriptome	215	Y
F022491	Metagenome / Metatranscriptome	214	Y
F025317	Metagenome / Metatranscriptome	202	Y
F029358	Metagenome / Metatranscriptome	188	Y
F031553	Metagenome / Metatranscriptome	182	Y
F032294	Metagenome / Metatranscriptome	180	Y
F032707	Metagenome / Metatranscriptome	179	Y
F034545	Metagenome / Metatranscriptome	174	Y
F035252	Metagenome / Metatranscriptome	172	Y
F038384	Metagenome / Metatranscriptome	166	Y
F039975	Metagenome / Metatranscriptome	162	Y
F042602	Metagenome / Metatranscriptome	158	Y
F045078	Metagenome / Metatranscriptome	153	N
F046963	Metagenome	150	N
F047583	Metagenome / Metatranscriptome	149	Y
F048946	Metagenome / Metatranscriptome	147	N
F049514	Metagenome / Metatranscriptome	146	Y
F050637	Metagenome	145	Y
F052783	Metagenome / Metatranscriptome	142	Y
F053117	Metagenome	141	Y
F053295	Metagenome	141	N
F053848	Metagenome / Metatranscriptome	140	Y
F056186	Metagenome	138	N
F062485	Metagenome / Metatranscriptome	130	Y
F062696	Metagenome	130	N
F063438	Metagenome / Metatranscriptome	129	Y
F065177	Metagenome	128	N
F066617	Metagenome / Metatranscriptome	126	Y
F070076	Metagenome / Metatranscriptome	123	Y
F072023	Metagenome / Metatranscriptome	121	Y
F072619	Metagenome / Metatranscriptome	121	Y
F074582	Metagenome / Metatranscriptome	119	N
F075110	Metagenome	119	N
F077957	Metagenome / Metatranscriptome	117	N
F078362	Metagenome	116	Y
F078867	Metagenome / Metatranscriptome	116	Y
F082909	Metagenome / Metatranscriptome	113	Y
F084286	Metagenome / Metatranscriptome	112	Y
F084629	Metagenome	112	Y
F086262	Metagenome	111	N
F088183	Metagenome	109	Y
F089068	Metagenome / Metatranscriptome	109	Y
F098719	Metagenome / Metatranscriptome	103	N
F100531	Metagenome / Metatranscriptome	102	Y
F101053	Metagenome	102	Y
F103116	Metagenome	101	N
F103989	Metagenome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0105060_100007	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	5186	Open in IMG/M
Ga0105060_100171	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
Ga0105060_100496	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → unclassified Candidatus Nitrosotenuis → Candidatus Nitrosotenuis sp.	1426	Open in IMG/M
Ga0105060_100891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1207	Open in IMG/M
Ga0105060_101304	Not Available	1093	Open in IMG/M
Ga0105060_101408	Not Available	1072	Open in IMG/M
Ga0105060_101508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
Ga0105060_101511	Not Available	1052	Open in IMG/M
Ga0105060_101899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	988	Open in IMG/M
Ga0105060_102117	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	959	Open in IMG/M
Ga0105060_102488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	918	Open in IMG/M
Ga0105060_102542	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	914	Open in IMG/M
Ga0105060_102796	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
Ga0105060_103202	All Organisms → cellular organisms → Bacteria → Nitrospirae	860	Open in IMG/M
Ga0105060_103208	All Organisms → cellular organisms → Archaea	860	Open in IMG/M
Ga0105060_103365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	849	Open in IMG/M
Ga0105060_103496	Not Available	841	Open in IMG/M
Ga0105060_103704	Not Available	829	Open in IMG/M
Ga0105060_103807	All Organisms → cellular organisms → Archaea	824	Open in IMG/M
Ga0105060_103980	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	815	Open in IMG/M
Ga0105060_104735	Not Available	779	Open in IMG/M
Ga0105060_105344	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter	755	Open in IMG/M
Ga0105060_105860	Not Available	737	Open in IMG/M
Ga0105060_106592	Not Available	716	Open in IMG/M
Ga0105060_106673	Not Available	714	Open in IMG/M
Ga0105060_107674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
Ga0105060_108833	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
Ga0105060_108881	Not Available	664	Open in IMG/M
Ga0105060_109244	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	657	Open in IMG/M
Ga0105060_109533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
Ga0105060_109925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas → unclassified Defluviimonas → Defluviimonas sp. 20V17	645	Open in IMG/M
Ga0105060_110577	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → unclassified Candidatus Nitrosotenuis → Candidatus Nitrosotenuis sp.	636	Open in IMG/M
Ga0105060_111146	Not Available	629	Open in IMG/M
Ga0105060_111327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	626	Open in IMG/M
Ga0105060_111528	Not Available	623	Open in IMG/M
Ga0105060_111770	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
Ga0105060_112088	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	616	Open in IMG/M
Ga0105060_112762	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
Ga0105060_113119	All Organisms → cellular organisms → Bacteria → Terrabacteria group	603	Open in IMG/M
Ga0105060_113386	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	601	Open in IMG/M
Ga0105060_114930	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	585	Open in IMG/M
Ga0105060_115167	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	583	Open in IMG/M
Ga0105060_115445	Not Available	580	Open in IMG/M
Ga0105060_115604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis	578	Open in IMG/M
Ga0105060_117577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	563	Open in IMG/M
Ga0105060_118545	Not Available	555	Open in IMG/M
Ga0105060_118642	Not Available	555	Open in IMG/M
Ga0105060_118807	Not Available	553	Open in IMG/M
Ga0105060_119148	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
Ga0105060_119310	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
Ga0105060_120528	Not Available	542	Open in IMG/M
Ga0105060_121008	Not Available	539	Open in IMG/M
Ga0105060_121531	Not Available	536	Open in IMG/M
Ga0105060_121912	Not Available	534	Open in IMG/M
Ga0105060_122082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
Ga0105060_122132	Not Available	532	Open in IMG/M
Ga0105060_122501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
Ga0105060_123025	Not Available	527	Open in IMG/M
Ga0105060_123564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	525	Open in IMG/M
Ga0105060_123807	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
Ga0105060_123960	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	523	Open in IMG/M
Ga0105060_124288	Not Available	521	Open in IMG/M
Ga0105060_124890	All Organisms → cellular organisms → Bacteria → Nitrospirae	518	Open in IMG/M
Ga0105060_125595	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	514	Open in IMG/M
Ga0105060_125772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
Ga0105060_126007	Not Available	512	Open in IMG/M
Ga0105060_126624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
Ga0105060_127693	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0105060_100007	Ga0105060_1000079	F084286	MAFNCGVSFGACMVRITKVDENGNVIAGNNSYVTDKPISISVNPNIETGNAFSVRNGCGCSISRRKFPDTFNWWELSLQTATLEPEMIAFMLGADTIDDGADVVGVAFPSALACEDANPAVAFEFWSEHVVGSGLDATYPYFHWVFPSSVWQIGDNTFEEGPAQPTLNAFTQTNGNWGDGPYGDGPPDSQDISEGGFWATADALPTAECAAQAVTATS*
Ga0105060_100171	Ga0105060_1001713	F078362	MGSVTWRKRGNRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGCRRGRLPFRRW
Ga0105060_100496	Ga0105060_1004962	F086262	MQSKLEAQCQMCRQKINIGDEIVRMASGIWIHEYCQEKTEQTNSQDNLQDFNKKLLESKTDRLKSLKCIYCGNGSFMKSKLETAALDDGTIITKKLYPCYTCAHIMEFIENLSS*
Ga0105060_100891	Ga0105060_1008911	F004741	VKILIDISPEHYDRILSEFPEESRMYAILKNGLVIHHFEGNNEFRTVEILCEKFHARMILAAAELVCPEAAAGIEEAIRLSRTLH*
Ga0105060_101304	Ga0105060_1013042	F070076	MTHRRRPTTRNAALREALGDWLDQHEQLAGLLDPESLRQQFRAAYDSLRPSPDGVPIPRLRRLLPWPRERFNTVLEALRAAQAIDLEPLSAQVGDTQATHDSYQVYGQCYGRLRWRA*
Ga0105060_101408	Ga0105060_1014082	F001808	MIFRLSVIILLLSSCSAQYHLNKAIKKGYKCEETGDTIRITTLDSIPVIINDTIVWEKIINTKDTIIKYNTVYVPKTRLDKRLQYKIQVKTIYKDRLVYKYKYRAEGQKAKSEVKKVKAQRPRPNGNLSLLFVGVGIGLLLSYLFKFARERYLF*
Ga0105060_101508	Ga0105060_1015082	F077957	MSGLTLRVLAALAAGALVLAFVTSLVLVSSQSASSVSTRPLVQYGSR*
Ga0105060_101511	Ga0105060_1015112	F048946	MANRIKISTTDVLLIGGGLLAFTAVKRILIAAGIAAGQGTQAASQLITDPNSYFKPSYYKRTGGSLIRRADAERYARQIHSAFGIFQDDFNAIVAVFSRMPSKAAISFLADVFSQIYKEDLLTFLTNGGGLLPWDGLSDNQLKQLIALTNKLPNR*
Ga0105060_101899	Ga0105060_1018991	F049514	MKINYLETELSPIGFLARDSLSGVAELVKGLITKDHVTEEKLSYWQLIFLQSKVNGCSYHGEDLPHMNWQWPKNTWFQEQLSHHLGDAELAARAA*
Ga0105060_102117	Ga0105060_1021174	F008878	MTDRIAEYIAVAIAVHGAAVAIVNLTPTPKDNEALGHYSRMAVKLYRAIEIL
Ga0105060_102488	Ga0105060_1024882	F008079	MKIKDEYIGAKISHKGNRITLDVNRYDYFVSIGLGYMFEEPTVSEPKVIKYKAVKPPIPAPVVDEPTVETEEDGTEAE*
Ga0105060_102542	Ga0105060_1025421	F103116	KGLKSSQFMQDEVFATALEKMRGDLLWEFENSKPEEAPKREIVWAQLRAIENFRNEMAKMIDNGKVAQRAIERASKTLV*
Ga0105060_102796	Ga0105060_1027961	F035252	MTPELERAVKRYKQWFGSYKKSGELIKVQVWLTVNDGCIEFLTLDDSFECVYSA*
Ga0105060_103202	Ga0105060_1032021	F056186	MGVDIMTKAQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV*
Ga0105060_103208	Ga0105060_1032082	F046963	MTLTKIMALTIELKETLHQLIDNLMINPQQMRNMAYDLKPLTKDDVEVAFGIFVGYVTGGFAELFFESQKRSMTASELIQVRKILFERALEMKKAIAYVRAQESKS*
Ga0105060_103365	Ga0105060_1033651	F014613	QMFPNLSDEAVVGITICVPFIGLYIWSLWNSAKAKAFNEGYKRGRSSVRFAEIIK*
Ga0105060_103365	Ga0105060_1033652	F005585	VTGLTMLETHYSTGASSMATRGTIYYAFSKSVKHSVFSSETHLTWQLLLSRPNSQEWWKVQSAKIRISISLDMPLSWVDYDFRVQKIGTTLSLTRNHNSNQYCDYCKYRWGQNKNGWDLRATTPAVWKVQSETPLRKAQVRFYCQPCADDAQNWPDGTFYSLKEQLEDAINDFAGREKLDVELPR*
Ga0105060_103496	Ga0105060_1034961	F074582	MKDIREGEQVSDTQRSLSDWINDAGDTLFDRGVEYGDPRHNFLRIFKICQTLGIQLRDPS
Ga0105060_103704	Ga0105060_1037042	F011582	MGHEEPLRISCEDCPGGTECRRDCLVEFFLGERDARVVRLDGDAGRARPTDALEPDLRRALDTLAAHGLEPTVVAHRRSGGAAQAS*
Ga0105060_103807	Ga0105060_1038072	F019112	GGMCDPLIDLIDFEKKLPAHIKKSQYKKDKGSARVSAEYFITYEDTDLPKQEEEGSFAKFVCRDPYEELLENDIELVKNLIKKTFGVSKNQNDKIEHKIILEDRKLIKV*
Ga0105060_103980	Ga0105060_1039802	F078867	MFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNRRE*
Ga0105060_104735	Ga0105060_1047352	F050637	MQLNSNGQIQRSAAQWGEIIARYRQSGMGSRQFCEEEGLTLRTFEKWYGRIRRSETSKGKFVEVQAPLGGGGPWAVEVEFPTGVRLRVRG*
Ga0105060_105344	Ga0105060_1053441	F022491	MIAGHDTTRENLTLSEADLAACRPLAGEGGHVLRALCPFHGSDHQRSLRVQVSSGRFVCF
Ga0105060_105860	Ga0105060_1058602	F016803	GRHQCWVDALPWNRDDATTLNNFFKSETGKKFKDALLNTVLMQNASAITDRNHLQYSSGFAMGQASLVKVIEMMADRESITGQEDDPDSVTNT*
Ga0105060_106592	Ga0105060_1065921	F009734	VKDVIQEINTAQIGISTAAYYDNRYLLAVPTGSNNFNDTILVYNTILSAFEGTWTPKVMQFALTNFQSEGLRLMMKLTTGQINKYSGYKTPAQTTSADYVDFGIQSNGTSVGTFDFSSSVRTRDMDFGDPFAQKHGSNFEVIFDDSFSSNATIAIQRDSDVGDVEVQPNLNIASTVLVLPFVLPAVLPTSVKKRIASDLRKYEKWRLINISVTSEANKMAVRQITAAANPDTIEVQKT
Ga0105060_106673	Ga0105060_1066731	F001947	VGGRRTRRPGEISIQLGSGIDKGRSCTCWPRPDDARPCTPQTCDWRCRACRVHGRPFYSHGDLQYLEHGTGPLAAELDRLWRVRGAGKHRTVQEGRGDDGDGWRALPRGAAALAPRRPHSLPVTDLYYPGLQDAPPGQDGRNAGSGR*
Ga0105060_107674	Ga0105060_1076742	F013868	VEPLSAAGLAELAGATVAEVERLVALGILTPRDGARPFLATDVQKIRLAKACEQAGLPMDGIASVIRAGRLSFAFLDASSYRRWALRSGPTYRQVSQETGVP
Ga0105060_108833	Ga0105060_1088332	F039975	VAKAPEGNIFPTQSELHSPNVTARHAKELTLYLGGQLVGIADLGKQTPEIARAYSYAMVTGVRAEYDPYMSPGPGGQAAVQAGQFVTFIVASWIREMGFRTTMKIDVPRAEREHLAVTAGLGKLNDDGKLTVPKYGTKIHIADIIFTDLPMEADG*
Ga0105060_108881	Ga0105060_1088812	F053848	LDVRLTNVYVADAKLVADGLAQPEDAMAVFVGRAGKGRVAPFVVRRSYTGAGGWYREAMALLAPNGDVVWRSAEQVITLRGSNKIDTFTDEVHGVAVDSDQDHELALLVGGDEVGRVPLAVLDEDPPYPTGSDAAAVLDEA
Ga0105060_109244	Ga0105060_1092441	F065177	MLKIYAWCIRRKHLSPHSIFALLLIGVLPLATAHAVASSTSRTVIIEDWNHSGSGSLPSGWKLEAGKFNNGTGIIRQGDSKFLKMVPDGKVLRISKSINIDPQNFPILELDLRDKTSEPPALRVILTFDSGVPFFEDTLIYTLGETRPFTFQNKDQWEGYSRNIYNDFFAGFPRKKELPK
Ga0105060_109477	Ga0105060_1094772	F063438	MRGFGRQCRGQGKVFVNLVRQTETRLLATGAPVVTLAQTAQAQVQSAPALTKDQRTRWDTTLTGALATHQQIVAQSRR
Ga0105060_109533	Ga0105060_1095332	F045078	MDADLDDEPLLLSLAAARALFRAPQAEDACWADVHMPDGTVRACGRPEASSLGLCADHRVELFGLEAS*
Ga0105060_109925	Ga0105060_1099251	F007214	MYGIHLARLPASAKLFCTLYFVGIGCGALAAFAQAATAVGLTPADVQASLAPDMPMTHMGHGQASAEREITLGEVSSAAKVWIRTPLLVQTSHTHLFGQTLIAGLLGLIFLFSSVREWLKALIVALPFVGTLIDIGGMWMTRFVSPSLASLVIAGGTFFALGYLVITVISLWELWATKEARA*
Ga0105060_110577	Ga0105060_1105772	F103989	MNMGKSAIKESNNHQEFDGEINATDIFMRDLRRSYPEFAKALEEFMKKELQRLDDELK*
Ga0105060_111146	Ga0105060_1111462	F010980	VPKYLLINGTEPRWRLHDTMDSADLEQSLARVMENGAITYTLASRNEGETFQSLTINGKTLVTYVITEEDDPDPAKTRSR
Ga0105060_111240	Ga0105060_1112401	F098719	MAIDLSALFGQQPDYSQFISPAETQRMQSGAGQQALLNAAIALLGQSGQTRQPISTGQILGSALGAGMEGYNQSFDRNLKQIVTGMQLGEYKKKQDAQQRLQAAIQGATREVPQF
Ga0105060_111327	Ga0105060_1113271	F003662	MKTKQATVTIKDQEWIVLDTDEIKDSKVFCTLTNPDSTIVWHAWVDINQIVGII
Ga0105060_111528	Ga0105060_1115281	F008534	MLWPIDSELAVWVAYIKRQLGIATQVSVIKVKVIVAKNRNSVSTQ*
Ga0105060_111770	Ga0105060_1117701	F019097	MDIVQLAFMLGPLLGAAAGYLVDGVTGATSGFVIPMGPFVLVWLFGGR*
Ga0105060_112088	Ga0105060_1120881	F072023	KDKECYNMRTIGDRFFEDKDAWVVGKYALEFLNAIFQIEQDEEELK*
Ga0105060_112762	Ga0105060_1127621	F017192	ELATVRKFMLQTAQLGWLNHELNVENATAIRKMATASQELAASSVRLEETMRQLSESLAGQLKELANRLDTIQGKVSSLK*
Ga0105060_112762	Ga0105060_1127622	F052783	MRPAVRHGGTGRRCLRSLMPSLLLSLIAVSDGLAGEWEKMSESYDNTLRAHAKRIAEVEARERGVPADQEKRADKITRDRITGIKGSLKGGGKARSLAETAEKASGDARALIDVSREQREYL
Ga0105060_113119	Ga0105060_1131191	F047583	LLLEEVLLEGAEEVFGLCQSQPEMLDALVVLVEGDEIGDGLFLTIIVTNDELQFDAHRRASPGSRDR*
Ga0105060_113386	Ga0105060_1133861	F001424	MHSLSTNLDFIEDERVFCHNCANAEMVEQRQSMPAEQMERHRKVNAKPLQWMFDQAKVKGGWATITWSEHQCSQTGLATFPTDVKHRCHLFQPKATAVESESWWLT*
Ga0105060_114930	Ga0105060_1149301	F006941	HLPCGARQPTRHRCHDPVQGAKKNLQLIERITRQAPLLTPTLTHQAHALHQTLQKVMRGFGRQCRGQGKVFVTLVRQTERHLLDLGGAIATWTEETQALLHQTASLRESQRQRLLRDLEAASDAHRQITKQSQRLTQGKGLAHCKIVNAYDPTIAPILKGKSNCPAQFGRKTGILSEPASGFIFANRVPAGNPS
Ga0105060_115167	Ga0105060_1151671	F034545	IDLGISKRALDDWIDENDHGAMITRARTRAADLMACDTIKIADGMEVDHPQRDVQRIRTRQWLAERWDSKTYGLQKAQQININVQDLRMAALRHVEVIDDLSTENGA*
Ga0105060_115445	Ga0105060_1154452	F031553	GESMMGPTRNATSTAEPSAVALRGTFVKLTGFPCHRSDPYVGGETVTFRGSDGTRTVIVTGSANWIGLPATSEAPLGQCRQVARFTAELPPAVRYVVVINDHRLPAVTLAELRAEGLRHTFRLPS*
Ga0105060_115604	Ga0105060_1156042	F032707	VTDRVVESEFVFDRHAATDLSVAYAILVPERRARLVRAGQEASPCHDQCGDLRPGVLGPAEEER
Ga0105060_117577	Ga0105060_1175772	F007705	MPRNDAAAPGHVCPGIRIHAIDIVQPPGIGIPPIADMDAHQTIVTAALAAKSSAETPKKARSE
Ga0105060_117929	Ga0105060_1179291	F053295	MISYQSIVDKITAFYDNHAQVEKVGSDFKEQMVNFATKDEKYPLVYVVPSGVTPYENVSIFNIEVY
Ga0105060_118545	Ga0105060_1185451	F062485	ALVTIASGLYPIAFCASCSARWIQDGTQQRTIDQIQEPSLMAQGPSLMAQGRSQPATQPDAHALALRSGQLLPGGLPW*
Ga0105060_118545	Ga0105060_1185452	F012785	MVIHYQPGRLRRNSDQPTAITDVLVATSPSSWRTGDIPLGTPTCSARSRHGRWALYPHGDEVVVVWPGGALVGPAVEVAGALDRLGGDRHDHLDRAAAAAIRRFLTDP
Ga0105060_118642	Ga0105060_1186421	F082909	MCRSALVTITFGLYPIAICTSCGARWIQDGHQQRTINQIQEPTLFALAQGPSLMAQGPRQASSPTSTLTLV
Ga0105060_118807	Ga0105060_1188071	F015726	EPASGFIFAFALPVGNPTDLSYVVPLVDKVQHALTQVAGRSALAIHSLAGDLALNDATLRAALHTRGILTVGIPHTVAPLSSSPTPEDIRQMLTAAGLHGKRTPHQVHLACASGYSRPVVESIIASLLGRGAARITYKGQRGAIVQIGMAVMAHNAATVVRIQHNRLSTRAQKLRQLLRLKRHK
Ga0105060_119148	Ga0105060_1191482	F066617	ERTAQGIDIKFHETARIDPEKIVELVGAGDKIAFAPPATLRMKGVASRNDLFSSIENILREIA*
Ga0105060_119310	Ga0105060_1193102	F032294	MNVYINPRGGVEEDYPLHAHTRDFLDKMKAKNRKTNAPMEVGYNSALPALLALEAMKDNKVLAWDPVARKSKAL*
Ga0105060_120528	Ga0105060_1205281	F001799	LQNNDKSILAQWAKNLLNDDFFKEVIDNLKKEQISVIINTSAEECDRREDAYRHIKSIELITGHLEGLASETVIKEKKWKIL*
Ga0105060_121008	Ga0105060_1210081	F012064	LGLAAALSLPAAAAAGQEQQQHFGLHDMTCTSIMAMGKGLAKNASFNLTLRNQDNGSTLATKTVTSSEMGEFMTRLPARLNQVLSVRLEVARSDGTKVGFADHVMAKGAAMCNLPFTGPSRAAPLLLIGTGSVGLGLLLVAATARRAEGSGEPQRGAPVGRLPLVRLRRR*
Ga0105060_121531	Ga0105060_1215312	F062696	VGVCFSACSPQSTLSRLLKNHPYLYENFRHDSIRIENVLVQDSVFFFTKEKDTITFNNATIYREFDTLRLVQSCPPCTTYVSKTILQPTQKLLKETRYKRSLREKLED
Ga0105060_121912	Ga0105060_1219122	F022257	TAEARLYAGYGALRIIAAITQGEVIQKILRHLKLAVDPPPIAPARLRQEAFAWSSA*
Ga0105060_122082	Ga0105060_1220821	F089068	MPYLDKARQTPAAKNKQSELVALRGKWFKERTRLYDRETGLPTIAVLVDDLRNWLDEKGNVSVLVFRPSSEGNVEEVWGWEAYDDLLLDFVRRLKAFQTDGIVPQGTFCLPNVRSDEIILFVNPENS
Ga0105060_122132	Ga0105060_1221322	F029358	VRVLVTVLVGLVVVLVVLTELCLLQSAALRRRIEAALPPEEDER*
Ga0105060_122501	Ga0105060_1225011	F053117	KEDNFPARTGLHRSPVGYKWKEIYQRGDEFYDWDGHAFHFIGGIPKNADGSLALYTPKEQDEYLRELAESLKKGVQP*
Ga0105060_123025	Ga0105060_1230251	F100531	RVYRMRVRDVAHLKQRLIEEWRQFDQSIIDGAVSQWRDRRRACVRASGGHFEQTL*
Ga0105060_123564	Ga0105060_1235641	F101053	RQVVLKSRWIQAAKPSNYSPEGYKTKEDGLKWWDSFFGYIANDSSLANGFKTKDRTWLPDLEWITNATNFAKIIDGKYAK*
Ga0105060_123807	Ga0105060_1238071	F075110	IISVECGGSVCQPPVVRLEEPMTVYVLVREDQSEHGFVDASIVGLFRSQDEAAVLLKSSMAEAREQGLRVCGDPGTEPEWEVSWNIEPHPLR*
Ga0105060_123960	Ga0105060_1239601	F072619	LNALPSLLFFVGVRLGEDDHTRRIAVQEVATSDRTDFALGKKSRGRNGTEPLLHGSAIVIGVAEESLSTPATAEQECSEWRVFVLRSLCSQAKVQVVACRLCIPKVELHGLAFLNHVSDRDGSGLLIRSNEVPNEEVAPLEMTPMLIDHNAQMQRAVGIASLGSPQG
Ga0105060_124288	Ga0105060_1242881	F038384	AQPIAPAGSGVVIDKVVVDNGQTQTVKYFVKGGSARLRALIRRVEWAENELSVIEQLQLLKLDTVVNERRVAAFRTAQLTNPYYPPGFIPLAITTDNGCYGESFLQRALKEQLAYEATPEAALQLIGFLEHLQTELDAELKALPPQEKKAAQGPIDALRPRVVALSRCDVPPP
Ga0105060_124890	Ga0105060_1248901	F009436	FGRIHPPGLLKSTIGTFTGTSQKAAAIADYSSGNRQTVAFQIDPRNFMVTIASSYVLVTLKEGVSRHPVIHKTWRLVGQRKGEEVTEFFGTVHTYIDSDGLKWEHRFERSPHEDELIGFGSSGEEILIITLESFYPTTAPDLRGVIISPSA*
Ga0105060_125595	Ga0105060_1255951	F001663	FRKQWVDRKVPGAVGYYNIANRDWIGTYALLEKQAYSPSKLNDTVNDPEIDGMIAQVMRQTDRDKINALMRNIYTRMRSEHHGVPVVFVHSPYAASKTLGKWNPGSVMYDLFLDELSRK*
Ga0105060_125772	Ga0105060_1257722	F084629	MDMQPGVCVIDLFGMSYHGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0105060_126007	Ga0105060_1260071	F088183	LHPLIRPERLTTEQVALGRYTLPTGSKTTNWVRETGGIDGEPFGLEADAFAPDVIRAAFITEATPSLRAFRPLDGLCALLEEAARRRLDALTLEAVVAQIAAMDAGELLALARHLRTRLAPGGEGPAPAVVERLVQLDAAALRELVRRLQERLAAEA*
Ga0105060_126624	Ga0105060_1266242	F025317	VARVTERLSVLAFAALLVLAIIGIAFALGYGIGKLLL*
Ga0105060_127693	Ga0105060_1276932	F042602	VSERLFVFRWDVDHRVCATDGLPRIRAACRDFGVPNTFFVNMGRSTNLLEWIGKGSARSKAKLADRDAVHLIKKT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009798: Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences