Metagenome / Metatranscriptome Family F082909

Basic Information
Family ID	F082909
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	71 residues
Representative Sequence	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS
Number of Associated Samples	90
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.27 %
% of genes near scaffold ends (potentially truncated)	37.17 %
% of genes from short scaffolds (< 2000 bps)	92.04 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (73.451 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (43.363 % of family members)
Environment Ontology (ENVO)	Unclassified (39.823 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.628 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.24% Coil/Unstructured: 75.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00011	HSP20	14.29
PF01145	Band_7	8.93
PF13560	HTH_31	2.68
PF03861	ANTAR	1.79
PF13453	zf-TFIIB	1.79
PF00313	CSD	0.89
PF01037	AsnC_trans_reg	0.89
PF03631	Virul_fac_BrkB	0.89
PF01527	HTH_Tnp_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	14.29
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	1.79
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
All Organisms	root	All Organisms	26.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
cellular organisms	root	All Organisms → cellular organisms	26.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.42 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.54 %
Cryptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.42 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3.54 %
Cryptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.42 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3.54 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	3.54 %
Cryptosporangium aurantiacum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium aurantiacum	1.77 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.45 %
Nocardioides sp. LS1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	3.54 %
Cryptosporangium aurantiacum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium aurantiacum	1.77 %
Streptomyces sp. 2231.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 2231.1	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10601438	Not Available	510	Open in IMG/M
3300005562\|Ga0058697_10125384	Not Available	1095	Open in IMG/M
3300006194\|Ga0075427_10031768	Not Available	868	Open in IMG/M
3300006572\|Ga0074051_11726665	Not Available	746	Open in IMG/M
3300006846\|Ga0075430_101310660	Not Available	595	Open in IMG/M
3300009553\|Ga0105249_11380420	Not Available	776	Open in IMG/M
3300009789\|Ga0126307_10119697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2095	Open in IMG/M
3300009789\|Ga0126307_10123399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2064	Open in IMG/M
3300009798\|Ga0105060_118642	Not Available	555	Open in IMG/M
3300009809\|Ga0105089_1050520	Not Available	644	Open in IMG/M
3300009840\|Ga0126313_11499270	Not Available	560	Open in IMG/M
3300010037\|Ga0126304_10791631	Not Available	643	Open in IMG/M
3300010038\|Ga0126315_10843663	Not Available	606	Open in IMG/M
3300010040\|Ga0126308_11067761	Not Available	568	Open in IMG/M
3300010040\|Ga0126308_11089621	Not Available	562	Open in IMG/M
3300010041\|Ga0126312_10024685	All Organisms → cellular organisms → Bacteria	4011	Open in IMG/M
3300010041\|Ga0126312_10603869	Not Available	789	Open in IMG/M
3300010045\|Ga0126311_10147805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1671	Open in IMG/M
3300010166\|Ga0126306_10078129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2353	Open in IMG/M
3300010166\|Ga0126306_10720181	Not Available	801	Open in IMG/M
3300010329\|Ga0134111_10477241	Not Available	544	Open in IMG/M
3300010375\|Ga0105239_12052316	Not Available	664	Open in IMG/M
3300011000\|Ga0138513_100019754	Not Available	921	Open in IMG/M
3300011412\|Ga0137424_1094352	Not Available	608	Open in IMG/M
3300012021\|Ga0120192_10007183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1570	Open in IMG/M
3300012021\|Ga0120192_10022387	Not Available	1002	Open in IMG/M
3300012937\|Ga0162653_100001543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1968	Open in IMG/M
3300012937\|Ga0162653_100026109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300018027\|Ga0184605_10345458	Not Available	672	Open in IMG/M
3300018051\|Ga0184620_10030125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1418	Open in IMG/M
3300018052\|Ga0184638_1143112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300018061\|Ga0184619_10415527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300018067\|Ga0184611_1114089	Not Available	944	Open in IMG/M
3300018073\|Ga0184624_10146679	Not Available	1036	Open in IMG/M
3300018075\|Ga0184632_10423718	Not Available	555	Open in IMG/M
3300018078\|Ga0184612_10454203	Not Available	636	Open in IMG/M
3300018081\|Ga0184625_10551303	Not Available	573	Open in IMG/M
3300018082\|Ga0184639_10371560	Not Available	743	Open in IMG/M
3300018082\|Ga0184639_10371560	Not Available	743	Open in IMG/M
3300018422\|Ga0190265_12076232	Not Available	673	Open in IMG/M
3300018432\|Ga0190275_13148820	Not Available	534	Open in IMG/M
3300018465\|Ga0190269_10308416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	927	Open in IMG/M
3300018469\|Ga0190270_11829047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300018476\|Ga0190274_12554576	Not Available	608	Open in IMG/M
3300019249\|Ga0184648_1217000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300019254\|Ga0184641_1226395	Not Available	576	Open in IMG/M
3300019254\|Ga0184641_1336821	Not Available	514	Open in IMG/M
3300019254\|Ga0184641_1368812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1220	Open in IMG/M
3300019255\|Ga0184643_1455219	Not Available	697	Open in IMG/M
3300019259\|Ga0184646_1051501	Not Available	772	Open in IMG/M
3300019279\|Ga0184642_1020328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1118	Open in IMG/M
3300019377\|Ga0190264_12098508	Not Available	522	Open in IMG/M
3300019767\|Ga0190267_10470564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300019767\|Ga0190267_11454606	Not Available	524	Open in IMG/M
3300019867\|Ga0193704_1061171	Not Available	722	Open in IMG/M
3300019884\|Ga0193741_1181271	Not Available	506	Open in IMG/M
3300020003\|Ga0193739_1073946	Not Available	868	Open in IMG/M
3300020016\|Ga0193696_1172563	Not Available	521	Open in IMG/M
3300021510\|Ga0222621_1144137	Not Available	508	Open in IMG/M
3300022694\|Ga0222623_10232994	Not Available	712	Open in IMG/M
3300022756\|Ga0222622_10331635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1055	Open in IMG/M
3300027560\|Ga0207981_1062738	Not Available	680	Open in IMG/M
3300027750\|Ga0209461_10107333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	640	Open in IMG/M
3300028705\|Ga0307276_10155405	Not Available	584	Open in IMG/M
3300028710\|Ga0307322_10099031	Not Available	748	Open in IMG/M
3300028721\|Ga0307315_10296755	Not Available	512	Open in IMG/M
3300028722\|Ga0307319_10020330	Not Available	2032	Open in IMG/M
3300028722\|Ga0307319_10228116	Not Available	611	Open in IMG/M
3300028744\|Ga0307318_10274544	Not Available	589	Open in IMG/M
3300028744\|Ga0307318_10302502	Not Available	560	Open in IMG/M
3300028771\|Ga0307320_10115221	Not Available	1027	Open in IMG/M
3300028771\|Ga0307320_10172787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	840	Open in IMG/M
3300028791\|Ga0307290_10368733	Not Available	525	Open in IMG/M
3300028793\|Ga0307299_10215585	Not Available	722	Open in IMG/M
3300028796\|Ga0307287_10017281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2479	Open in IMG/M
3300028796\|Ga0307287_10278783	Not Available	632	Open in IMG/M
3300028796\|Ga0307287_10422349	Not Available	501	Open in IMG/M
3300028814\|Ga0307302_10220477	Not Available	927	Open in IMG/M
3300028819\|Ga0307296_10424383	Not Available	727	Open in IMG/M
3300028875\|Ga0307289_10135209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 2231.1	1012	Open in IMG/M
3300028889\|Ga0247827_11188674	Not Available	528	Open in IMG/M
3300030516\|Ga0268255_10042586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium aurantiacum	1493	Open in IMG/M
3300030591\|Ga0247626_1228453	Not Available	542	Open in IMG/M
3300030634\|Ga0247636_10186390	Not Available	650	Open in IMG/M
3300030635\|Ga0247627_10175344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300030829\|Ga0308203_1059561	Not Available	594	Open in IMG/M
3300030903\|Ga0308206_1099487	Not Available	650	Open in IMG/M
3300030987\|Ga0308155_1004654	Not Available	957	Open in IMG/M
3300030987\|Ga0308155_1013668	Not Available	688	Open in IMG/M
3300030988\|Ga0308183_1175571	Not Available	543	Open in IMG/M
3300030990\|Ga0308178_1053505	Not Available	761	Open in IMG/M
3300030990\|Ga0308178_1154885	Not Available	530	Open in IMG/M
3300030994\|Ga0308153_105128	Not Available	720	Open in IMG/M
3300031099\|Ga0308181_1070554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300031099\|Ga0308181_1105508	Not Available	614	Open in IMG/M
3300031100\|Ga0308180_1004927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1036	Open in IMG/M
3300031125\|Ga0308182_1007450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	797	Open in IMG/M
3300031424\|Ga0308179_1012062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	858	Open in IMG/M
3300031424\|Ga0308179_1058209	Not Available	515	Open in IMG/M
3300031548\|Ga0307408_102006647	Not Available	556	Open in IMG/M
3300031731\|Ga0307405_10125067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium aurantiacum	1766	Open in IMG/M
3300032002\|Ga0307416_100943707	Not Available	964	Open in IMG/M
3300032002\|Ga0307416_102139664	Not Available	661	Open in IMG/M
3300032005\|Ga0307411_11698309	Not Available	584	Open in IMG/M
3300034151\|Ga0364935_0104498	Not Available	873	Open in IMG/M
3300034643\|Ga0370545_135372	Not Available	561	Open in IMG/M
3300034644\|Ga0370548_029216	Not Available	891	Open in IMG/M
3300034680\|Ga0370541_006508	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300034680\|Ga0370541_033977	Not Available	624	Open in IMG/M
3300034681\|Ga0370546_034891	Not Available	729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	10.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.03%
Aquatic	Environmental → Aquatic	20.35%
Plants	Host-Associated → Plants	10.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.49%
Sediment	Environmental → Aquatic → Sediment	13.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.96%
Freshwater	Environmental → Aquatic → Freshwater	7.08%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.65%
Phylloplane	Host-Associated → Plants → Phylloplane	1.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.08%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.65%
Sand	Environmental → Terrestrial → Soil → Sand	1.77%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.65%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	43.36%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	7.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009798	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030591	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030634	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030994	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_142 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_106014382	3300000858	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSSTLSALTS*
Ga0058697_101253842	3300005562	Agave	MPRCPLCRSAVVTITFGLYPIAICSSCSARWIQDGHQQRAINQIQEPTLFALAQGPSLMAPSRS*
Ga0075427_100317682	3300006194	Populus Rhizosphere	CRSALVTITFGLYPIAICTSCSARWIQDGHQQRAINQVQEPSLMGQGPSLMAQGSLLASSPTSTLTLAHRG*
Ga0074051_117266652	3300006572	Soil	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS*
Ga0075430_1013106601	3300006846	Populus Rhizosphere	MCRSALVTITFGLYPIAICASCSARWIQDGRQQRAINQIQEPSLFASAQGPSLSAQGPSLMAPSRS*
Ga0105249_113804202	3300009553	Switchgrass Rhizosphere	MPRCPLCRSARVTITFGLYPIAICSSCNARWIQDGHQQRAINQIKEPSLMVQEPSLIAQGPFLASSPTSTLTLAPRG*
Ga0126307_101196972	3300009789	Serpentine Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSSTVSALTR*
Ga0126307_101233993	3300009789	Serpentine Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLFASALGPSLTASSATSSTLTALTS*
Ga0105060_1186421	3300009798	Groundwater Sand	MCRSALVTITFGLYPIAICTSCGARWIQDGHQQRTINQIQEPTLFALAQGPSLMAQGPRQASSPTSTLTLV
Ga0105089_10505201	3300009809	Groundwater Sand	MPRCPLCRSALVTVTFGLYPIAICSSYSARWIQDGHQQRAINQIHEPSLMAQGPLLASSPTSTLAGGHIASRPAVSLEGSPW*
Ga0126313_114992701	3300009840	Serpentine Soil	VTITFGLYPIAICTSCSARWIQDGHQQRAINQIQEPALMGQGPSLMAQGSLLASSPTSTLTLAHRG*
Ga0126304_107916312	3300010037	Serpentine Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMAQGPFLASSPTSTLTLAHRG*
Ga0126315_108436631	3300010038	Serpentine Soil	REVREVREVVMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSSTLSALTR*
Ga0126308_110677611	3300010040	Serpentine Soil	NERPPPVREVLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSSTLSALTR*
Ga0126308_110896211	3300010040	Serpentine Soil	TITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLFASALGPSLTASSATSSTLTALTS*
Ga0126312_100246852	3300010041	Serpentine Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSSTLSALTR*
Ga0126312_106038691	3300010041	Serpentine Soil	MPRCPLCRSALVTLTVGLYPMAICASGSARWIQDGHQQRAINQIQEPSLMAQGPFLASSPTSTLTLAHRG*
Ga0126312_111261571	3300010041	Serpentine Soil	MPRCPLCRSALVTIGFGMYPTAICTSCGARWVQDGHQQRTIDQIQEPSLMAPGPSLMTQ
Ga0126311_101478053	3300010045	Serpentine Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSS
Ga0126306_100781291	3300010166	Serpentine Soil	ALVTITFGLYPTAICTNCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAPSRS*
Ga0126306_107201812	3300010166	Serpentine Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQIQEPSLFASALGPSLTASSATSSTLTALTS*
Ga0134111_104772411	3300010329	Grasslands Soil	SALVTITFGLYPIAICTSCSARWIQDGHQQRAINQIEEPSLMGQGPSLMAQGSPLASSPTSTLTLAHRG*
Ga0105239_120523161	3300010375	Corn Rhizosphere	MPRCPLCRSARVTITFGLYPIAICSSCNARWIQDGHQQRAINQIQEPSLMVQEPSLIAQGPFLASSPTSTLTLAHRE*
Ga0138513_1000197543	3300011000	Soil	MPRCPLCRSALVTLTFGLYPTAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMAQGPFLASSPTSTLMLAHRG*
Ga0137424_10943522	3300011412	Soil	FGLYPIAICTSCGTRWIQDGHQQRAINQIQEPSLMGQGPSLVAQGSLLASSPTSTLTLTHRG*
Ga0120192_100071833	3300012021	Terrestrial	MPRCPLCRSALVTITFGLYPIAFCTSCSTRWVQDGHQQRTINQIQEPSLMAQGPSLMAQGPSLMA
Ga0120192_100223872	3300012021	Terrestrial	MPRCPLCRSALVTIGFGLSPIASCTSCNARWIQDGHQQRAINQVQEPSLMAQEASLLTQGPLLASSPTSTLAGAHVASPPAASLEHSPW*
Ga0162653_1000015432	3300012937	Soil	MPRCPLCRSALVTITFGLYPMAICTSCSARWIQDGHQQRAINQIQEPSLMGQEPSLMPQGPFLASSPTSTLTLAPRG*
Ga0162653_1000261092	3300012937	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQGSLLASSPTSTLTLAHRG*
Ga0184605_103454582	3300018027	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAITRIQEPSLMALGPSLTASSSTSSTLSALTS
Ga0184620_100301252	3300018051	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0184638_11431121	3300018052	Groundwater Sediment	MPRCPLCRSALVTITFGLYPIAFCTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLTATSSTSSTLTALTT
Ga0184619_104155272	3300018061	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAQGPSLLAPSRS
Ga0184611_11140891	3300018067	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPTLFASAQGPSLLAQGPSLMAPSHS
Ga0184624_101466793	3300018073	Groundwater Sediment	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLKARRPFLASSPTSTLTLAHRG
Ga0184632_104237181	3300018075	Groundwater Sediment	NVNEGDDQKGSFMPRCPLCRSALVTITFGLYPTAICSSCNARWIQDGRQQRAINQIQEPTLFASGQGPSLLAQGPSLMAPSRS
Ga0184612_104542031	3300018078	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICASCNARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0184625_105513032	3300018081	Groundwater Sediment	MPRCPLCRSALVTLTFGLYPMAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLLAPSRS
Ga0184639_103715601	3300018082	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPTLFASAQGPSLMAPSRS
Ga0184639_103715602	3300018082	Groundwater Sediment	MPRCPLCRSARVTITFGLYPIAICTSCSARWIQDGTQQRAINQIQEPTLFASAQGPSLMAQGPSLMAPSRS
Ga0190265_120762322	3300018422	Soil	VPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMAQEPILASSPTSTLTLAHRG
Ga0190275_131488201	3300018432	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPSLMAQRPSLMALGRL
Ga0190269_103084161	3300018465	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFVASSPTSTLTLAHRG
Ga0190270_118290472	3300018469	Soil	MPRCPLCRSALVTIGFGLYPTAICTSCSARWIQYGHQQRAINQIQEPSLMGQGPSLMAQGSLLASSPQPGTLTFAHR
Ga0190274_125545761	3300018476	Soil	MPRCPLCRSALVTITFGLCPTASCTSCGARWIQDGHQQRAINQIQEPTLFAPAHGPSLMAQGPLLASSPTSTLTLAHRG
Ga0184648_12170002	3300019249	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASAHGPSLLAQGPLLASSPTSTLTLAHRG
Ga0184641_12263951	3300019254	Groundwater Sediment	ERGSLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSHS
Ga0184641_13368212	3300019254	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPTLFASAQGPSLMAQGPSLLAPSRS
Ga0184641_13688122	3300019254	Groundwater Sediment	MPHCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFLASSPTSTLTLAPRG
Ga0184643_14552192	3300019255	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQVQEPTLFASAQGPSLMAQGPSLLAPSRS
Ga0184646_10515012	3300019259	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0184642_10203281	3300019279	Groundwater Sediment	MPHCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLISQGPSLMAQGSLLASSPTSTLTLAHR
Ga0190264_120985082	3300019377	Soil	CRSALVTITFGLYPIAICTSCSARWIQDGHQQRAINQIQEPSLMTLGPSLTASSSTSSTLTALTS
Ga0190267_104705642	3300019767	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0190267_114546062	3300019767	Soil	VTITFGLYPIAICTSCSARWIQDGHQQRAINQVQEPSLMGQGPSLMAQASLLASSPTSTLTLAHRG
Ga0193704_10611711	3300019867	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFLASSPTSTLTLAPRG
Ga0193741_11812711	3300019884	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLIAQGPSLMAPSRS
Ga0193739_10739461	3300020003	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLIAQGPSLMAQGPFLASSPTSELTLAHRG
Ga0193696_11725631	3300020016	Soil	RPERGSLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGTQQRAINQIQEPSLMGQGPSLMAQGSLLASSPQPGTLTFAHRG
Ga0222621_11441372	3300021510	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICASCNARWIQDGHQQRAINQIQEPTLFASAQGPSLGPDPV
Ga0222624_12184022	3300021951	Groundwater Sediment	ALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPTLFASAQGPSLMAPSRS
Ga0222623_102329942	3300022694	Groundwater Sediment	FGLYPIAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFLASSPTSTLTLAPRG
Ga0222622_103316352	3300022756	Groundwater Sediment	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASGQGPSLMAPSRS
Ga0207981_10627382	3300027560	Soil	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0209461_101073332	3300027750	Agave	MPRCPLCRSAVVTITFGLYPIAICSSCNARWIQDGHQQRAINQIQEPTLFALAQGPSLMAPSRS
Ga0307276_101554051	3300028705	Soil	CPLCRSALVTITFGLYPTAICTNCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAPSR
Ga0307322_100990312	3300028710	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0307315_102967551	3300028721	Soil	CPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASGQGPSLMAPSR
Ga0307319_100203304	3300028722	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMAQGRF
Ga0307319_102281162	3300028722	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLFAQGPSLMAPSRS
Ga0307318_102745442	3300028744	Soil	MPRCPLCRSALVTIGFGLYPTATCTSCSARWIQDGRQQRAINQVQEPSLMGQGPSLMGQGPSLMAQG
Ga0307318_103025021	3300028744	Soil	LVTLTFGLYPMAICTSCNARWIQDGHQQRAINQIQEPTLFASAQGPSLIAPSRS
Ga0307320_101152213	3300028771	Soil	LVTLTFGLYPIAICTSCGARWIQDGRQQRAINQIQEPTLFASGQGPSLMAQGPLLASSPTSTLMLVHRG
Ga0307320_101727872	3300028771	Soil	MPHCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMAQGPFLA
Ga0307290_103687332	3300028791	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSHS
Ga0307290_103911961	3300028791	Soil	PLCRSALVTITFGLYPIAICSSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLGPDPV
Ga0307299_102155852	3300028793	Soil	MPRCPLCRSALVTITFGLYPTAICSSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAQASLLASSPTSTLTLAHRG
Ga0307287_100172811	3300028796	Soil	RGVLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0307287_102787832	3300028796	Soil	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0307287_104223491	3300028796	Soil	PMCRSALVTITFGLYPIAICTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQGPLLASSPTSTLTLAHRG
Ga0307302_102204772	3300028814	Soil	VTITFGLYPIAICTNCSARWIQDGHQQRAINQIQEPSLMALGPSLTATSSTSSTLTALTT
Ga0307296_104243832	3300028819	Soil	MPRCPLCRSALVTITFGLYPTAICASCSARWIQDGHQQRAINQVQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0307289_101352091	3300028875	Soil	MPRCLLCRSALVTVTFGLYPIAICSSCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFLASS
Ga0247827_111886742	3300028889	Soil	MPRCPLCRSARVTITFGLYPIAICSSCNARWIQDGHQQRAINQIQEPSLMVQEPSLIAQGPFLASSPTSTLTLAHRE
Ga0268255_100425862	3300030516	Agave	MPRCPLCRSAVVTITFGLYPIAICSSCSARWIQDGHQQRAINQIQEPTLFALAQGPSLMAPSRS
Ga0247626_12284532	3300030591	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQGSLLASSPTSTLTLAHRG
Ga0247636_101863901	3300030634	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMALGPSLTASSSTSSSTLTALTT
Ga0247627_101753442	3300030635	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGRQQRAINQVQEPSLMGQEPSLMGQEPSLMGQEPSLMGQEP
Ga0308203_10595611	3300030829	Soil	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGRQQRAINQIQEPTLFASGQGPSLLAQGPSLMAPSRS
Ga0308206_10994871	3300030903	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFLASSPTSTLTLAHRG
Ga0308155_10046541	3300030987	Soil	LMPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVKEPSLMAQGPFLASSPTSTLTLAPRG
Ga0308155_10136681	3300030987	Soil	ERGSLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0308183_11755711	3300030988	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVKEPSLMAQGPFLASSPTSTLTLAPRG
Ga0308178_10535052	3300030990	Soil	GSLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0308178_11548852	3300030990	Soil	GSLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAQASLLASSPTSTLTLAHRG
Ga0308153_1051281	3300030994	Soil	PNRNKERPERGSLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQGSLLASSPTSTLTLAHRG
Ga0308181_10705541	3300031099	Soil	RRPSLKPPHHNQGDDQRGVLMPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGTKQRAINQVQEPTLFASAQGPSLMAPSRS
Ga0308181_11055081	3300031099	Soil	MPRCPLCRSALVTITFGLYPTAICASCNARWIQDGHQQRAINQIQEPTLFASAQGPSLLVQGPSLMAPSRS
Ga0308180_10049272	3300031100	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMAQGPFLASSPTSTLTLAPRG
Ga0308182_10074502	3300031125	Soil	MPRSPMCRSALVTITFGLYPTAICTSCGARWIQDGHQQRAINQIQEPTLFASAHGPSLLAQGPLLASSP
Ga0308179_10120622	3300031424	Soil	MPHCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMVQEPSLMTQGPFLASSPTSTLTLAP
Ga0308179_10582092	3300031424	Soil	CRSALVTITFGLYPIAICTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQGSLLASSPTSTLMLVHRG
Ga0307408_1020066471	3300031548	Rhizosphere	MPRCPLCRSALVTITFGLCPIAFCTSCSARWVQDGNQQRTIDQIQEPSLMAQGPSLMAQGPLLASSPTSTLTLAHRG
Ga0307405_101250675	3300031731	Rhizosphere	VTITFGLYPIAICTSCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQASLLASSPTSTLTLAHRG
Ga0307416_1009437072	3300032002	Rhizosphere	ALVTITFGLYPTAICTSCGARWIQDGHQQRAINQIQEPSLMAQGPSLVAQGPLLASSPTSTLTLAHRR
Ga0307416_1021396642	3300032002	Rhizosphere	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0307411_116983091	3300032005	Rhizosphere	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMAQGPFLAS
Ga0364935_0104498_558_791	3300034151	Sediment	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAINQVQEPSLMGQGPSLMAQGSLLASSPTSTLTLAHRG
Ga0370545_135372_291_485	3300034643	Soil	MPRCPLCRSALVTITFGLYPTAICTSCNARWIQDGTQQRAINQIQEPTLFASAQGPSLMAPSRS
Ga0370548_029216_391_606	3300034644	Soil	MPRCPMCRSALVTITFGLYPTAICSSCSARWIQDGHQQRAINQIQEPTLFASAQGPSLLAQGPSLMAPSRS
Ga0370541_006508_412_627	3300034680	Soil	MPRCPLCRSALVTITFGLYPTAICTSCSARWIQDGHQQRAITRIQEPSLMALGPSLTASSSTSSTFSALTS
Ga0370541_033977_87_320	3300034680	Soil	MPRCPLCRSALVTLTFGLYPMAICASCSARWIQDGHQQRAINQIQEPSLMGQGPSLMAQGPFLASSPTSTLTLAHRG
Ga0370546_034891_352_576	3300034681	Soil	MCRSALVTITFGLYPIAICTSCNARWIQDGHQQRAINQIQEPTLFASAHGPSLLAQGPLLASSPTSTLTLAHRG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082909

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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