Sample 3300009770

3300009770: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA

Overview

Basic Information
IMG/M Taxon OID	3300009770 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118679 \| Gp0141807 \| Ga0123332
Sample Name	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	855615378
Sequencing Scaffolds	78
Novel Protein Genes	93
Associated Families	70

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	5
Not Available	33
All Organisms → cellular organisms → Bacteria → Terrabacteria group	3
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin070	1
All Organisms → cellular organisms → Bacteria → PVC group	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1
All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	7
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	7
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium ADurb.Bin168	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium minihomine	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Anaerobic Biogas Reactor Microbial Communites From Washington, Usa
Type	Engineered
Taxonomy	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor → Anaerobic Biogas Reactor Microbial Communites From Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline)

Location Information
Location	Washington, USA
Coordinates	Lat. (^o)	47.6525	Long. (^o)	-122.3049	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002525	Metagenome / Metatranscriptome	552	Y
F003987	Metagenome / Metatranscriptome	458	Y
F004383	Metagenome / Metatranscriptome	440	Y
F005744	Metagenome / Metatranscriptome	391	Y
F006745	Metagenome	365	Y
F009968	Metagenome / Metatranscriptome	310	Y
F010099	Metagenome / Metatranscriptome	308	Y
F011496	Metagenome	290	Y
F011593	Metagenome / Metatranscriptome	289	Y
F015738	Metagenome / Metatranscriptome	252	Y
F018746	Metagenome / Metatranscriptome	233	Y
F022442	Metagenome / Metatranscriptome	214	Y
F028538	Metagenome / Metatranscriptome	191	Y
F029974	Metagenome	186	Y
F033483	Metagenome / Metatranscriptome	177	Y
F035785	Metagenome / Metatranscriptome	171	Y
F037272	Metagenome / Metatranscriptome	168	Y
F037916	Metagenome	167	Y
F037930	Metagenome / Metatranscriptome	167	Y
F038694	Metagenome / Metatranscriptome	165	Y
F039153	Metagenome / Metatranscriptome	164	Y
F040648	Metagenome / Metatranscriptome	161	Y
F042353	Metagenome / Metatranscriptome	158	Y
F043203	Metagenome	156	Y
F043951	Metagenome / Metatranscriptome	155	N
F045124	Metagenome / Metatranscriptome	153	Y
F046176	Metagenome	151	N
F047698	Metagenome / Metatranscriptome	149	N
F048060	Metagenome / Metatranscriptome	148	Y
F049068	Metagenome / Metatranscriptome	147	Y
F049656	Metagenome / Metatranscriptome	146	Y
F049900	Metagenome	146	Y
F051949	Metagenome / Metatranscriptome	143	N
F052414	Metagenome	142	Y
F054066	Metagenome / Metatranscriptome	140	N
F056642	Metagenome / Metatranscriptome	137	Y
F058179	Metagenome / Metatranscriptome	135	Y
F062734	Metagenome / Metatranscriptome	130	N
F063807	Metagenome / Metatranscriptome	129	N
F067768	Metagenome / Metatranscriptome	125	Y
F067884	Metagenome / Metatranscriptome	125	N
F068989	Metagenome / Metatranscriptome	124	Y
F069434	Metagenome / Metatranscriptome	124	Y
F070634	Metagenome	123	N
F072820	Metagenome / Metatranscriptome	121	Y
F075034	Metagenome / Metatranscriptome	119	Y
F076220	Metagenome / Metatranscriptome	118	Y
F077264	Metagenome / Metatranscriptome	117	Y
F078878	Metagenome / Metatranscriptome	116	Y
F080273	Metagenome	115	Y
F083876	Metagenome / Metatranscriptome	112	Y
F085739	Metagenome / Metatranscriptome	111	N
F085852	Metagenome / Metatranscriptome	111	N
F088842	Metagenome / Metatranscriptome	109	N
F089276	Metagenome / Metatranscriptome	109	Y
F090057	Metagenome / Metatranscriptome	108	Y
F090058	Metagenome / Metatranscriptome	108	N
F092293	Metagenome / Metatranscriptome	107	N
F092294	Metagenome / Metatranscriptome	107	N
F094052	Metagenome / Metatranscriptome	106	N
F094907	Metagenome	105	Y
F097600	Metagenome / Metatranscriptome	104	N
F100240	Metagenome / Metatranscriptome	102	N
F101100	Metagenome / Metatranscriptome	102	N
F103320	Metagenome / Metatranscriptome	101	N
F103499	Metagenome / Metatranscriptome	101	Y
F103500	Metagenome / Metatranscriptome	101	N
F103505	Metagenome / Metatranscriptome	101	Y
F105193	Metagenome / Metatranscriptome	100	Y
F105430	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0123332_1029050	All Organisms → cellular organisms → Bacteria	3257	Open in IMG/M
Ga0123332_1031791	All Organisms → cellular organisms → Bacteria	3057	Open in IMG/M
Ga0123332_1033743	Not Available	2929	Open in IMG/M
Ga0123332_1039766	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
Ga0123332_1050872	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2171	Open in IMG/M
Ga0123332_1051878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin070	2141	Open in IMG/M
Ga0123332_1053526	Not Available	2092	Open in IMG/M
Ga0123332_1057161	All Organisms → cellular organisms → Bacteria → PVC group	1998	Open in IMG/M
Ga0123332_1076486	Not Available	1627	Open in IMG/M
Ga0123332_1081698	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1554	Open in IMG/M
Ga0123332_1088216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1473	Open in IMG/M
Ga0123332_1089045	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1464	Open in IMG/M
Ga0123332_1091065	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1440	Open in IMG/M
Ga0123332_1095885	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1390	Open in IMG/M
Ga0123332_1096605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1383	Open in IMG/M
Ga0123332_1101730	All Organisms → cellular organisms → Bacteria → PVC group	1335	Open in IMG/M
Ga0123332_1103204	Not Available	1321	Open in IMG/M
Ga0123332_1103295	All Organisms → cellular organisms → Bacteria → PVC group	1321	Open in IMG/M
Ga0123332_1104320	Not Available	1312	Open in IMG/M
Ga0123332_1108269	All Organisms → Viruses → Predicted Viral	1279	Open in IMG/M
Ga0123332_1124973	Not Available	1157	Open in IMG/M
Ga0123332_1125409	Not Available	1155	Open in IMG/M
Ga0123332_1128021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	1138	Open in IMG/M
Ga0123332_1129607	Not Available	1128	Open in IMG/M
Ga0123332_1132603	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium ADurb.Bin168	1111	Open in IMG/M
Ga0123332_1142478	Not Available	1059	Open in IMG/M
Ga0123332_1146627	Not Available	1038	Open in IMG/M
Ga0123332_1162110	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	970	Open in IMG/M
Ga0123332_1169164	Not Available	943	Open in IMG/M
Ga0123332_1169680	Not Available	942	Open in IMG/M
Ga0123332_1171765	Not Available	934	Open in IMG/M
Ga0123332_1176338	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	918	Open in IMG/M
Ga0123332_1184582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	890	Open in IMG/M
Ga0123332_1184859	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	889	Open in IMG/M
Ga0123332_1188035	Not Available	879	Open in IMG/M
Ga0123332_1188064	Not Available	879	Open in IMG/M
Ga0123332_1195114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
Ga0123332_1195318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	858	Open in IMG/M
Ga0123332_1201257	Not Available	841	Open in IMG/M
Ga0123332_1203333	Not Available	835	Open in IMG/M
Ga0123332_1209085	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	820	Open in IMG/M
Ga0123332_1209505	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	819	Open in IMG/M
Ga0123332_1217555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	799	Open in IMG/M
Ga0123332_1221411	Not Available	790	Open in IMG/M
Ga0123332_1223234	Not Available	786	Open in IMG/M
Ga0123332_1229879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
Ga0123332_1230831	Not Available	769	Open in IMG/M
Ga0123332_1230922	Not Available	768	Open in IMG/M
Ga0123332_1232016	Not Available	766	Open in IMG/M
Ga0123332_1236416	All Organisms → cellular organisms → Bacteria → PVC group	757	Open in IMG/M
Ga0123332_1239661	Not Available	750	Open in IMG/M
Ga0123332_1243238	Not Available	743	Open in IMG/M
Ga0123332_1248858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium minihomine	732	Open in IMG/M
Ga0123332_1253362	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	724	Open in IMG/M
Ga0123332_1254065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	722	Open in IMG/M
Ga0123332_1256423	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
Ga0123332_1270097	All Organisms → cellular organisms → Bacteria → PVC group	694	Open in IMG/M
Ga0123332_1293649	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	658	Open in IMG/M
Ga0123332_1297791	Not Available	652	Open in IMG/M
Ga0123332_1298258	Not Available	651	Open in IMG/M
Ga0123332_1302446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	645	Open in IMG/M
Ga0123332_1304057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	643	Open in IMG/M
Ga0123332_1308627	Not Available	637	Open in IMG/M
Ga0123332_1318270	Not Available	625	Open in IMG/M
Ga0123332_1325798	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	616	Open in IMG/M
Ga0123332_1333632	Not Available	607	Open in IMG/M
Ga0123332_1336281	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	604	Open in IMG/M
Ga0123332_1347246	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
Ga0123332_1354268	Not Available	585	Open in IMG/M
Ga0123332_1368904	Not Available	570	Open in IMG/M
Ga0123332_1378226	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
Ga0123332_1381490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	559	Open in IMG/M
Ga0123332_1386810	Not Available	554	Open in IMG/M
Ga0123332_1388366	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	553	Open in IMG/M
Ga0123332_1396138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	546	Open in IMG/M
Ga0123332_1415005	Not Available	531	Open in IMG/M
Ga0123332_1416784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → unclassified Corynebacteriales → Corynebacteriales bacterium	529	Open in IMG/M
Ga0123332_1432026	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	518	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0123332_1029050	Ga0123332_10290501	F002525	MRWWAGVDSVKEQRKLEARKMLENAADSDTSGACL
Ga0123332_1031791	Ga0123332_10317914	F042353	METRSPPTTLTGDACRRLERIIRDDLEHATVSSTMVLVEEDGRITINELVLRLEDGRMVTLMPLDIPAEAAVDLRLDIYDDHLPGGHGWREATVDDDYAEELADAVEGARL*
Ga0123332_1033743	Ga0123332_10337431	F011593	MSGSLTPPSYCLGCRWPIYDGRRGEWDWYCRQHSPTGIRCSNVAVLRERCYRVRDYFSNREATL*
Ga0123332_1039766	Ga0123332_10397661	F068989	RAFGISGLYAPEEIDTGDRPEPRYVTEVPPATPTACEVCGVPVPEEIREKTKPHTPRVLCIEHFSEWWNERQPEVAE*
Ga0123332_1050872	Ga0123332_10508721	F045124	VTDDELRQMVYETRQDVRWIKDTLREIKEANQAQDERINEIKARQDSQTGRDGALAAIVSMVVAFF
Ga0123332_1051878	Ga0123332_10518785	F067768	QAALIALIVVALNALAQWVRSKVSYTKIVDDYWCYVQPVAEAVRGEIVKSLEGGTLSTTVMGAIVQRALAQFADSFRLNEGKQPTATQIAAVENELVDVAKRAIGGK*
Ga0123332_1053526	Ga0123332_10535263	F035785	MIRIEAENALKMTETEMLDVVFEASENSVIELNVVDPDSQAGDNDGVYLEVVKLDDYESVVRDRWPNQDGDRHIVSTDDIYSIYRALVDQVEEVA*
Ga0123332_1057161	Ga0123332_10571614	F048060	MWQGLFAALLEWLTALARSRTGTAGADAAAKPGLRERLDRRLAEWKAGRGTGEVNSGQ*
Ga0123332_1076486	Ga0123332_10764862	F103505	WVAQGYQILADDVDGELRLTVHFVSRDGAVGSEREQEFWPMTADIVQMLNANGIEISKALAGPRPWAGPHPEER*
Ga0123332_1078953	Ga0123332_10789531	F105193	MTSLTISLNYNTPAALLQPDARGQPRHILLVIDWEHATITAETRDPNLDGMPERRWRGMEDAYPLPPLADATKLREWVAEEVLPRAAPLADAYRTIWEDVEKFGRFPGHEDEKREFDRWMAMHEPPTHTGGLWRVAEWLPD
Ga0123332_1081698	Ga0123332_10816984	F067884	GQLLPVDIPAAGLGDNYLVESVSMRDMQGAVNRYTVTAVSGDALGGWLEWFSALARQAQKFVLYDEDQVGMLKVVVETVVVSDSATEYDWGTVDRKPESRVGLAHVDFSETDWVH*
Ga0123332_1088216	Ga0123332_10882162	F054066	MFGMSRKPKELKRFRVGKGSPALKAALYRMTNKSYLDIRIYRGYREVTRIVTPDTGMRRFVVEGVGAFVMPNEEQMLRQLHDRHALYIPYNINSSAPGEVTDDLEPVAFVYPPLSPAEFQAELEAQTVADLLAETEKDMSWIWLLAGGAVLIFVLILLFGGA*
Ga0123332_1088216	Ga0123332_10882164	F062734	ITHNPVSALTITGDPAGDQIHWEIADGDPPYTVFVNGIEIVTGYPGTVISTDAEPGRQYTAVVMDNESVADATVTGEYYTYPLWVWMLFATLVACLIISIWLPYAAFGAAIAGGFLLLLIAPNPDYAAYLRIFAGAAFIVGLAGLAGRLHS*
Ga0123332_1089045	Ga0123332_10890451	F049068	LEALQACGYDDVEVGSIERGGKTHLLLIGLDGEARFGDTQMGCVAVVPVGVD*
Ga0123332_1091065	Ga0123332_10910651	F015738	MWSRVDTGLYQELEDAIREVFPGESDRVRLAAVEAWGVVMNRVPESGRVEGASWCRHFDRPIDHHLVKEDRPACIEERHGCAGCPESTYRVR
Ga0123332_1091065	Ga0123332_10910654	F076220	MNPIPEAARSGLEKFLKEDLAGAVVTAASPYVDEDGRIYFDEIALRLGDGREVVVAAEMRSKRPAIVLEINPGDGWRNMTAREDYSDELEELTAEPWRPDPPEPWDRE*
Ga0123332_1095885	Ga0123332_10958852	F009968	MGPEDSPMTCHGCRHHYRERHWWLFEIDFCGLSGDVVGFECPLGCIETEGCRAYERPPAWPEGAIA*
Ga0123332_1096605	Ga0123332_10966054	F058179	MTGTEIVALVAWYAFIAVCILAFYLLADAATLSMTGSCSGQGFTNITVEADLLLATINQTANGTTWQIWGAPA*
Ga0123332_1101730	Ga0123332_11017301	F080273	MVQAEGEVRVVGVPFAPGTEVEVTISAKVRSNEASTLVDDEALTAARARMRELFRTIKGFRMGSKIPREELYERGSLR*
Ga0123332_1103204	Ga0123332_11032041	F088842	MEKSMKNDEGIAYGLIAVVMFIGMVALIFICFTPAMNGVIGAANTLIGDGKVGVQTAGAVEWGLGWFGAIPLIALLGIGYWSYIRALEENPSD*
Ga0123332_1103295	Ga0123332_11032951	F052414	MLAIEARLDAIRARVGGIAAMLDGALLVKHNRTPRKDGSVRVSPEHYTFQYRGADGKRKWKRVPKRAKATVERLVRAGEGYRALEREYAALLTELSLAGGSKKNG*
Ga0123332_1104320	Ga0123332_11043203	F011593	VTDNLTAPAWCLGCSHPIYDGRHGEWDWYCRQHSPTGIRCTNVAVLRERCYRVREYFAKK
Ga0123332_1108269	Ga0123332_11082693	F043951	MEHLSLGRPIEASLGPRYQCPICGLKLWTIQAPWTRWQEWYKTEDGRRHYKHSCNIMRDALVMFRWMFGQDW*
Ga0123332_1122991	Ga0123332_11229912	F049900	MGFNPHRPHRNSIADYLMVGAALAVVVLLVLWAVFG*
Ga0123332_1124973	Ga0123332_11249732	F103320	MATDNIHIAGVKAIYMTDVKDTPMAVNKFYPSLKVKNPAGDTITVNPVAAAFNERFRENESYPAFILKDPKSGRIDTLTWDVLDWDDTSVALYLGSGTGTGADVWMAPTDSYCAEKTVRIDFLTGWTWYFPRLKIAAAPGGDGSAAGSVNLQVVAKVQPLGELEPFQRIATPALAEEPSTGG*
Ga0123332_1125409	Ga0123332_11254091	F085739	MEHKMSEIPIAGETCCANCVNDAACSHRSALPGIARICDHFLNKTFPPDILQAIRAGNRCHICAAPALIGGGGRVTCGDCLFRQNAARGRLGDKAIREWRGTAAEPPAPVLDAGADPDE
Ga0123332_1128021	Ga0123332_11280213	F011496	MIDSQTSFWTPARVAVVIGAVLLIVALAYLVSLPQNKFQPADLLQPR
Ga0123332_1129607	Ga0123332_11296071	F047698	MQQATAIVGVLIGFLILTQIGIFVCDAMIGASSVNNTSSLYGAQETAIDTFVQCLSIVRILLIVAIVAVVFQYLQGAGL
Ga0123332_1132603	Ga0123332_11326032	F010099	MTNSQTSFWTPARIGAVIGVVLLIVALAYLVSLPQNKFQPADLLQPRYAADADLGYWMVDKYDQEVDVYHLHVVMEHPNGTFEWLEGDGIWLPRRAVEGTFTVIGTFDARKAHL*
Ga0123332_1142478	Ga0123332_11424782	F010099	MVDSQTSFWTPARIGAVIGAVLLIVALAYLVSLPQNQFQPADLLEPKYAADADLGYWMVYEYDPEVDVYHLLVVMQHDNGTFEWLDGDGIWLPRRAVEGTFNVIGSFDRRKANL*
Ga0123332_1146627	Ga0123332_11466271	F101100	PVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSTTLIEVGKGLCVECNRRAVDALVENKKVD*
Ga0123332_1162110	Ga0123332_11621101	F028538	TRKQRTVIPKLFFAKHGAEAFVECATIAIGKAETLLGKAALDDCCEVETRETGVSVEYVRPEVSE*
Ga0123332_1169164	Ga0123332_11691642	F040648	MAEIVINHEEALLEIEPMLDTAREGVAALETATTLIHIPTREMAKIQTAITKMREAAVYIENRARNLPVRSNATTKSALKEALKGASQEQIERAYTILSGQDAAYEVPAEGEEE*
Ga0123332_1169680	Ga0123332_11696802	F090058	MKLHYYIKGKDIPIYKGKLYIVASNDYEKVCTLIPNFEEISKGELYGHTLLMNYKGVESIFIVLNFDHEYEKMTYGVIVHELRHAADILAKQRDLNTGFENTENNAYIMEWMANTVFTELIRWGFIPNKKK*
Ga0123332_1171765	Ga0123332_11717652	F077264	FGPPGPEGFVHMVLNKIWNLRADSTWINIVKVQAIDSGRSSPGAFVRDLVWTLSKNPTIRSQVIDAMRGVQYGRSR*
Ga0123332_1176338	Ga0123332_11763381	F003987	CAPGGVGVIPSLPCGTFSDGDTPAGAFFVAAFEDGDTPHHVGEYRIDVVIRALQALQACGYDDVEIGSIERGGKTHLLLIGLDGEARFGDRQLGCIAVAPVGVE*
Ga0123332_1184582	Ga0123332_11845821	F049656	MTENIDRYEILDEPDERGYVMVKRLADGKTATCKAAWLKPVPHSESPAHVMPRSRTKALRMAMLVWE*
Ga0123332_1184582	Ga0123332_11845823	F067768	MMDILQNEQVQAALIAVIVIALNALAQWVRSKVSMTRIVDDYWCYIQPVAEAVRAEVLKSLSDATLSTSVVGQIVQRGVVQFADSFRLNEGKEPTDTQIAAVNFELEDVANRAVAGGK*
Ga0123332_1184859	Ga0123332_11848591	F092294	MHRGDIPHTNAFANLHDVTLQRLDVYHRNNGKYVFYGSEHFALTVDRWNGVPVIYVETDPGKPAEHPLFSDVLAGTLPPKFRTVGSVSATHLTESGEKVLKGAVVFTDPAIEAKANAGELSLSTGLASPEAPDPRLPGATRIAGPVTPNHILVF
Ga0123332_1184859	Ga0123332_11848592	F092293	MTRPPTLTDRQIQIIRENLDLFPADILKHPEFAGTDVTRHTIRNYQNRIRTQTAPDDEEALLLRLKQYLNSHGLESRFHGPGGVTGFISHLENRIRLRANPGGDRGKNAT*
Ga0123332_1188035	Ga0123332_11880352	F011496	MVDSQTSFWSPARIAAVIGAVLLIVALAYLVSLPQNKFQPADLLQPRYAADADLGFWMV
Ga0123332_1188064	Ga0123332_11880641	F010099	MPDSQTSFWTPPRIGAAIGAVLLVVALAYLASLPQNQFAPADLLEPKYAADADLGYWMVYEYDPEVDVYHLLVVMQHDNGTFEWLEGDGIWLPRRAVEGTFTVIGSFDRRKANL*
Ga0123332_1191146	Ga0123332_11911462	F078878	MSSIVLKIPIESQSFRAALTDATLRDRVLEWVAAAVTLDDAVYIPLRTDWMPNGTRRTADGVEVLLAGRWPPEIDAESGPRVSAAIFGRLWDTLCNATPADELEDIATCGLSGVNEEQTENEVPEEAPVVIHIHATPVNHVDGWTWSHVVTEIRQWGDIYPEEIPDPNDISEAEARALLKTIYQHPAVIAEFERRRMVAEATRQEYRDARTIQYAIYVGVDLPDPTPPPVTQEFSCTDDGNGDR
Ga0123332_1194647	Ga0123332_11946471	F097600	VPVTHIAWLDAGGVERARDIVTQRVLPGDGSLLIRQYLPSATSANGHTLTTIRAYNAQSGGTRFAEATFDAVGVAKTANNQITVEWTHTFADGGT*
Ga0123332_1195114	Ga0123332_11951142	F045124	VSDDDLRALIYESRQDAAATRRDIKWIKEALTEMKDANKAQDDRIAEIKARQDRQIGRDGAIAAAISAVVAFFTALASGGWFR*
Ga0123332_1195318	Ga0123332_11953181	F067768	NEQVQAALIALIVVALNALAQWVRSKVSYTKIVDDYWCYIQPVAEAVRAEVLDALKASTLSTSVLGAIVQRGIVQFAESYRLNEGREPTATQIAAVGIELEDVAERAIGGK*
Ga0123332_1198955	Ga0123332_11989552	F090057	MAVFTHIETDTGTNADISSATAIGAYTATADKLVMVDVSIDQVAGDGDYVMYVTRQINGAGSAYRLLPQTTLTAASGVTAIAAQSGWITVKSGDVLTVYVDGLAGDTSTPDWSTRWFEDSGTAGV
Ga0123332_1199728	Ga0123332_11997281	F100240	DSLRTVNARLAHGRGGGMVGLIGAELLSRDTPLARTSGGTPEYVAELLGALWRSGDSPEITNILHQALLAPTNHYREATFRAYVMASPVPMTVLAETVVKAIPPKERDEWYAGSGSKKLKTHSWIDRSIDHPSRESLRYSHFLNLIKAIETDPECLRGLGDIVDPKWE*
Ga0123332_1201257	Ga0123332_12012571	F004383	MDPAECGHAVLPSSDNLLERAFMARIRADEYREKLAKLREEFESRPEVMGLKLSIERCEEERRQCIAKAKAAGISKMGNYLLKIRTRKQRTVIPKLFFAKHGAEAFVECATIAIGKAEALLGKAAL
Ga0123332_1203333	Ga0123332_12033331	F046176	DDMRELARYLVDTASICDQGKCRGLENFPIFRENERFRSSVVLVPFNQMRDLHTLALAALRSGDVLAVTKEKYVVQFIRDGLKHQLPLVNMQLKKKGMRAISFKSLKK*
Ga0123332_1209085	Ga0123332_12090852	F003987	MIPSLPCGTFSDGDTPAGAFYVAAFEDGDQPHHVGEYRIDVVIRALRALQACGYDDVEVGSIERGGKTHLLLIGLDGEARFGDRQMGCIAVVPVEVD*
Ga0123332_1209505	Ga0123332_12095051	F105430	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLPRD
Ga0123332_1217555	Ga0123332_12175552	F049656	MTGIDRYEILDEPDERGHVTVKRLADGKTATCKAAWLKPAPHSESPAHVMPRSRTKALRMTMLDWE*
Ga0123332_1221411	Ga0123332_12214111	F043203	MGDLLPDNMAGIAAEVAVLIVSGVVLLDRVKNATRQLTTRMAALEQWRGEHASSIQPHTVCILEDRRKVDEREWLERIE
Ga0123332_1223234	Ga0123332_12232341	F042353	ACRRLEAIIRDDLEHATVSSASVHVGPDGRITLEELVLRLEDGRIVSPSLPDAEVGTAADMRLEVYDDHLSGGHGWREATVAEDYAEELEEMRP*
Ga0123332_1229879	Ga0123332_12298791	F089276	MCTKNGRQEPALNRDGAPLYRVRVWDPIVKKQVERVVAGLDAAKELMEEYAETKNRRPGQLRPQRVRFVDVSARYLVAYKVKRDGSPRPRSSVAKERNVLNAYLLPVLGSAWIGDLDLPDLNQAIKGLTLQDGRQASGGTKSTAAAVLRRVFVWAREERVIPVNSALELRTGWGASLRRRVVIPSIPQVLRLADAMDHFKLGLGDVVVVLAFTGLRWEEAVA
Ga0123332_1230831	Ga0123332_12308313	F063807	MKPPRTLSISAALHSRLWLLKIRRNARTLEDVVEQALDAL
Ga0123332_1230922	Ga0123332_12309221	F005744	TFEIIKAGAPDAPPEQALYRIQQTYPDGSGGRLNIDWDGLLRVHELIHDRIALEGRVCETCDTKGCHRPATWEIECRGAGVASCLIYSCDDHCPDPAILSPQDEIRRCA*
Ga0123332_1232016	Ga0123332_12320163	F069434	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPIIMSCLRCNRS*
Ga0123332_1236416	Ga0123332_12364161	F029974	RIYDSFELFGLPEELRALVREAVESDAWDWFRDCDGCTLVSELYWPTIYFPPCLRHDFDCIRGDGGAAASRRFYRLQRAYGMTALRSGLRASAVTLAWYAVLQWRRKGRLQK*
Ga0123332_1239661	Ga0123332_12396612	F072820	MKHLHQVIEDAVTIRGIIDYLEKSVEPVGLHELAMTQHISNGTALRLCRILEKASIIEHPVVTRIVMGASQEVPQLAWRLTKSFFLGGCVYNAQELAGGMA*
Ga0123332_1243238	Ga0123332_12432381	F037272	MTTKQIIRIYTATGVEEIDADRLLVQNAEYVLLRGDEEIRRVKIADLVPGEEHGGIETVYSRS*
Ga0123332_1248858	Ga0123332_12488583	F069434	RTATGKHTLWNQEGGTFMNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTFRHPLRMLPVIISCIRCASWAARHS*
Ga0123332_1253362	Ga0123332_12533623	F069434	MNHIFDKTPCWNIFDHTDTPEALWDLQRQGKHSEARRAAIKLTLLHPFRMLPVIISSLRCNRS*
Ga0123332_1254065	Ga0123332_12540651	F051949	MFAHAGTARLDIFTDSLLLVVGEDLFLARLSRLSPLMQGRAAYCPLSRRYQGTAGHYCDVEQGIGLRRSKPGAALIFVDQG
Ga0123332_1256423	Ga0123332_12564231	F070634	QALPAGLQDRRKGDIMTNTILRESTVRKGRHIISVLEFASGEIVMCVDDVRTGIQEDIALREYVNAYEVYYDFDQGWMADGQEIPYLDSF*
Ga0123332_1270097	Ga0123332_12700971	F029974	MSGRCGIFGVGIGRAAGLDRETERRRILESFDVLDISPTLRALVAEALDSKAWDWFEECDGCTAVSEIYWPTIYFPPCLRHDFDCVTGRGGWEASQRFYRLQRAYAVGRFRAGIRAGTVTLAWYAWLKWRKACRAH*
Ga0123332_1292564	Ga0123332_12925641	F103499	RLNVDWEGLLRLHEVIHDRIALEGRVCETCGTKGCHRPATWEIECRGAGVSGRLIYSCDEHCPDPAILSPQDEIRRLVEER*
Ga0123332_1293649	Ga0123332_12936492	F049068	EDGDQTHHVGEYRIETVLRALRALMACGYDDVEVGSIERGGETHLLLIGLDGEARFGDRQLGCIAVLPVGVE*
Ga0123332_1297791	Ga0123332_12977911	F094052	PGVAFPDVKIRESQTAKDRLEQLRDWLEFYFNPTTVLRSGAGTVIGASDSGAMRVWNNFIGGTQAWIEEQYEAFLQPILTANGYDDLNVRIQLKRPELDRSTVVVEQLRVGIEGRALTREDIRRNLSELDLGELTDEVRAELDATYAAAPALFENLAGFTRKEGRRVSAAERKIIAANEASLRAIERILERGGE*
Ga0123332_1298258	Ga0123332_12982582	F083876	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQTAVLQLAQDLEAQGAGFQ*
Ga0123332_1302446	Ga0123332_13024462	F037930	MTTSFTSSGKPKRTIASIQVERRYANVIRLFLAGELPDFNHQRHVHVANILRHLPYGRELMHLGLQVMAYRHFVPDKYSAEITDRYWAQLDGTLPDPAAFADLPGGASGR
Ga0123332_1304057	Ga0123332_13040571	F037930	FAPSGKPKRSIASLQVERRYQQVITLFLSGQLPGFDHARHVHVANILKHLPFGRELMHLGLQTMAYRNFVPDKYSAEITDYWWERLDGDLPDPALFADLPGGASGREDQACAATVRANGEPTAVGSDR*
Ga0123332_1308627	Ga0123332_13086272	F069434	MEVRTVKHIFDKTTCWNIFDHTDTPEPLWNLQRAGRHSAARRAAILLTLRHPFRMIPVIVACHRGF*
Ga0123332_1318270	Ga0123332_13182701	F018746	MRQSEALNEFEAAVLAALAQSPEKPLLAADLVQGFRTRASRSSCIARIEQMERRGRVRTSRFAG
Ga0123332_1325798	Ga0123332_13257981	F033483	VTPGDASVTLDIGGLPVVLVLPERDVELMMWPYRVHRILQEGCGDE*
Ga0123332_1325798	Ga0123332_13257982	F022442	ARDTRGDPARRGVQEAVPVTFVPIGEARLDLYTDALVLDIGPDTFVVPLARLADLTAHRRREVVVSRRYWGDAPGVFKDVEQALRLRRSQTDRSLMLTEQGRVYTMPIRAVHDVREGREESCEISLLVTDARQLDDTHSRQTVLEVRV*
Ga0123332_1333632	Ga0123332_13336322	F094907	MEDFPDTLRVCFVPARNGSDVICRLPSGKVAFPSRFYWNQPPPRPYEIWAVRPCGETASVGYVKPIQRLAEAPFRDTRAGRLGNSLLLRLGRSLARLVGFWRRSDADTRLRGEKQGD*
Ga0123332_1336281	Ga0123332_13362812	F003987	MIPALPCGTYSDGDTPAGAFFVAAFEDGDLTYHVGEYRIETVIRALEALQACGYDDVEIGSIERGGETHLLLIGLDGEARFGDRQTGCVAV
Ga0123332_1347246	Ga0123332_13472462	F037916	ADNGSESALKREGKRTPRKGGVEARQKAEIDRLRAVVAEITVENLELKKKRFFRRIRG*
Ga0123332_1348916	Ga0123332_13489161	F078878	AAAVTLDDAAYIPLRTDWMPNGTRRTADGVEVLLAGRWPPEVDAETGPRVSAAIFGRVWEIVCDAAPAEENKDIATCGLSGVNEEQTENEAPEDAPVVIHTRATPVNHVDGWSWSHVVTEIRQWADIYPDPLPDPNDISEAEARALLKTIYQHPAVIAEFERRRMVAEATQKEYRDARTIQYAIYVGVDLPDPTPP
Ga0123332_1354268	Ga0123332_13542683	F075034	APTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQAEWGRC*
Ga0123332_1368904	Ga0123332_13689041	F005744	MDEMFEIIKAGAPDAPPEQALYRIQHTYSDGSGGRLNVDWDGLLRLHELIHDRIALERRVCETCGTMGCHRPATWEIECRGAGVASCLIYSCDEHCPDPAILSPQDEIRRCA*
Ga0123332_1378226	Ga0123332_13782262	F006745	MSGRVVRRRRTSSAVLVYVIILVSLQVFLITVAAEAFLADHETLGWATAAVSVALAAWAAAFLRYLRP*
Ga0123332_1381490	Ga0123332_13814901	F038694	DHDMSDERITDLILQRLERIEGKLDSMQTSGCSKAQTHERTHDDVVELFRRIREVERVQAEGRGKLVVIVAILTAAAGLLFEWIGKHLT*
Ga0123332_1386810	Ga0123332_13868101	F005744	MDDETFEIIKAGAPDGPPEQALYRIQHTYSDGSGSRLNVDWTGLHRLHDLIHDRIALEGRVCETCDTKGCHRPATWEIECRGAGVSGRLIYACDEHAPDEAILSPQDEIRRCA*
Ga0123332_1388366	Ga0123332_13883661	F085852	MTFSPSEIILGATVPLTNGSTVTFSIAGKIETERDCDDAVVIFSRKLLKYTNSATDDDRLTVRQVVASITSTPLDKVPDVGTPTPPAPVKE
Ga0123332_1393410	Ga0123332_13934101	F078878	AAAVTLDDAAYIPLRTDWMPNGTRRTADGVEVLLAGRWPPEIDAESGPRISGAVFGRVWEIVCDADISPDFSGIATCGLYEENNEQSANRAQNEAPAAEEEPVADMVAAPAIPDAAIPLHLIDGWPWSHVVTEIRTWAAIYPEEIPDPNEISEAEARALLKTMLQHPAVIAEAERRRMVAEA
Ga0123332_1396138	Ga0123332_13961382	F049656	MDNIDRYEKLDEPDERGYVMVKRLADGKTATCKAAWLKPAPHSESPTHVMPRSRTKAI
Ga0123332_1404946	Ga0123332_14049461	F103500	WERTTQKICKILKDEVERMPRETKRALAVAAHLLPADEPILLFQVESWLSMQDDGRSWWEVPAYLSLAAISLPAVVKASEQAKKRILKVVTAI*
Ga0123332_1415005	Ga0123332_14150051	F056642	MYKLINSYAQSENQIKQGKYVPPEITVLEITLEKGFATSFAS
Ga0123332_1416784	Ga0123332_14167842	F038694	MSNDETVTGIILARLERIESKLDSMQTSGCAKAEKHERTHDDVVELFRRMREVERAQAEGRGKLVVIVAILTSAAGLLFEWIRKHLT*
Ga0123332_1432026	Ga0123332_14320261	F039153	VLFLNNSHGARRLNFSPLHKEIKKWAKSQGYIPKLYLRSAAVEYINPGVLKEPECLMMDLIQVIANGQAYLIAVNIFGPSYDNNLHYILEEHAKERKAIYVKAECLDDVICEIQDNEHNHKGVPCVPDIKSRRSFQGDYSILFSPENLTWKTARYERV*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009770: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences