Sample 3300009564

3300009564: Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; RNA IDBA-UD

Overview

Basic Information
IMG/M Taxon OID	3300009564 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0116874 \| Gp0147221 \| Ga0130019
Sample Name	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; RNA IDBA-UD
Sequencing Status	Permanent Draft
Sequencing Center	Marine Biological Laboratory
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	110855743
Sequencing Scaffolds	49
Novel Protein Genes	54
Associated Families	52

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	1
All Organisms → Viruses → Predicted Viral	4
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1
Not Available	15
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium (ex Bugula neritina AB1)	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Microbacterium phage Shocker	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C449	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED253	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Aquatic Microbial Communities From Different Depth Of Meromictic Siders Pond, Falmouth, Massachusetts
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond → Aquatic Microbial Communities From Different Depth Of Meromictic Siders Pond, Falmouth, Massachusetts

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater biome → meromictic pond → pond water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Falmouth, Massachusetts
Coordinates	Lat. (^o)	41.548517	Long. (^o)	-70.622961	Alt. (m)	N/A	Depth (m)	6
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000040	Metagenome / Metatranscriptome	3998	Y
F000888	Metagenome / Metatranscriptome	847	Y
F001968	Metagenome / Metatranscriptome	610	Y
F002794	Metagenome / Metatranscriptome	529	Y
F003927	Metagenome / Metatranscriptome	461	Y
F004573	Metagenome / Metatranscriptome	433	Y
F008182	Metagenome / Metatranscriptome	337	Y
F008615	Metagenome / Metatranscriptome	330	N
F010159	Metagenome / Metatranscriptome	307	Y
F017812	Metagenome / Metatranscriptome	238	Y
F018511	Metagenome / Metatranscriptome	234	N
F019132	Metagenome / Metatranscriptome	231	Y
F020346	Metagenome / Metatranscriptome	224	N
F021520	Metagenome / Metatranscriptome	218	N
F021885	Metagenome / Metatranscriptome	217	Y
F024291	Metagenome / Metatranscriptome	206	Y
F026250	Metagenome / Metatranscriptome	198	Y
F029419	Metagenome / Metatranscriptome	188	Y
F033789	Metagenome / Metatranscriptome	176	Y
F041218	Metagenome / Metatranscriptome	160	N
F042640	Metagenome / Metatranscriptome	158	N
F043342	Metagenome / Metatranscriptome	156	Y
F045060	Metagenome / Metatranscriptome	153	Y
F046329	Metagenome / Metatranscriptome	151	Y
F048951	Metagenome / Metatranscriptome	147	N
F049303	Metagenome / Metatranscriptome	147	Y
F049575	Metagenome / Metatranscriptome	146	Y
F050494	Metagenome / Metatranscriptome	145	Y
F054802	Metagenome / Metatranscriptome	139	N
F055721	Metagenome / Metatranscriptome	138	Y
F058806	Metagenome / Metatranscriptome	134	Y
F058819	Metagenome / Metatranscriptome	134	N
F061662	Metagenome / Metatranscriptome	131	Y
F066267	Metagenome / Metatranscriptome	127	N
F066592	Metagenome / Metatranscriptome	126	N
F067543	Metagenome / Metatranscriptome	125	Y
F071028	Metagenome / Metatranscriptome	122	Y
F072826	Metagenome / Metatranscriptome	121	Y
F073632	Metagenome / Metatranscriptome	120	N
F074785	Metagenome / Metatranscriptome	119	Y
F077210	Metagenome / Metatranscriptome	117	Y
F080651	Metagenome / Metatranscriptome	115	N
F080982	Metagenome / Metatranscriptome	114	Y
F083902	Metagenome / Metatranscriptome	112	N
F084150	Metagenome / Metatranscriptome	112	N
F085387	Metagenome / Metatranscriptome	111	Y
F089902	Metagenome / Metatranscriptome	108	Y
F090088	Metagenome / Metatranscriptome	108	N
F095514	Metagenome / Metatranscriptome	105	N
F097116	Metagenome / Metatranscriptome	104	N
F097230	Metagenome / Metatranscriptome	104	Y
F102825	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0130019_1000083	All Organisms → cellular organisms → Bacteria	9232	Open in IMG/M
Ga0130019_1000086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	9123	Open in IMG/M
Ga0130019_1000362	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5592	Open in IMG/M
Ga0130019_1000923	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3912	Open in IMG/M
Ga0130019_1001386	All Organisms → cellular organisms → Bacteria	3344	Open in IMG/M
Ga0130019_1002237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	2726	Open in IMG/M
Ga0130019_1002670	All Organisms → Viruses → Predicted Viral	2523	Open in IMG/M
Ga0130019_1003377	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2245	Open in IMG/M
Ga0130019_1004406	Not Available	1975	Open in IMG/M
Ga0130019_1004610	All Organisms → Viruses → Predicted Viral	1930	Open in IMG/M
Ga0130019_1004808	All Organisms → Viruses → Predicted Viral	1891	Open in IMG/M
Ga0130019_1004914	All Organisms → Viruses → Predicted Viral	1866	Open in IMG/M
Ga0130019_1006520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	1603	Open in IMG/M
Ga0130019_1007419	Not Available	1501	Open in IMG/M
Ga0130019_1009146	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1343	Open in IMG/M
Ga0130019_1011311	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1189	Open in IMG/M
Ga0130019_1011524	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1177	Open in IMG/M
Ga0130019_1011759	Not Available	1164	Open in IMG/M
Ga0130019_1013401	Not Available	1080	Open in IMG/M
Ga0130019_1014524	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium (ex Bugula neritina AB1)	1032	Open in IMG/M
Ga0130019_1015784	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	986	Open in IMG/M
Ga0130019_1015962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	981	Open in IMG/M
Ga0130019_1016565	Not Available	961	Open in IMG/M
Ga0130019_1018527	Not Available	905	Open in IMG/M
Ga0130019_1020904	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Microbacterium phage Shocker	850	Open in IMG/M
Ga0130019_1021068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	847	Open in IMG/M
Ga0130019_1021885	Not Available	830	Open in IMG/M
Ga0130019_1023325	Not Available	804	Open in IMG/M
Ga0130019_1023511	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	800	Open in IMG/M
Ga0130019_1026157	Not Available	759	Open in IMG/M
Ga0130019_1028207	All Organisms → cellular organisms → Eukaryota	730	Open in IMG/M
Ga0130019_1029860	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	710	Open in IMG/M
Ga0130019_1030519	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	702	Open in IMG/M
Ga0130019_1031188	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	695	Open in IMG/M
Ga0130019_1036923	Not Available	638	Open in IMG/M
Ga0130019_1039944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	614	Open in IMG/M
Ga0130019_1042062	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C449	598	Open in IMG/M
Ga0130019_1044930	Not Available	580	Open in IMG/M
Ga0130019_1045115	Not Available	579	Open in IMG/M
Ga0130019_1047200	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	566	Open in IMG/M
Ga0130019_1047544	Not Available	564	Open in IMG/M
Ga0130019_1049568	Not Available	553	Open in IMG/M
Ga0130019_1050736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED253	547	Open in IMG/M
Ga0130019_1052062	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Microbacterium phage Shocker	541	Open in IMG/M
Ga0130019_1054361	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
Ga0130019_1055629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524	Open in IMG/M
Ga0130019_1058431	Not Available	512	Open in IMG/M
Ga0130019_1058723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	510	Open in IMG/M
Ga0130019_1060073	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0130019_1000083	Ga0130019_100008315	F008615	MNDPKTFGGKMFKRFMQKGWRIQFTDEIQDRVAVIPPDRLNAKHLFAIYIPVVRHTWQPDLGREWYAALQIDRQMHGPSFEAKARPDDTERWAAFAAWIGDLVKNPQKFVA*
Ga0130019_1000083	Ga0130019_10000836	F010159	MSWSIPALIEADIKSGKAQYRTFQTGNGGQSILPVPSNSYVVIFGYGFSPAGGGMTRGTAEVEPNNLTISDGFLRPFETQQISFYTGTDFYPFIHHVDLKSMAYLNSWNAANPDLNFGLTVRYAQEIDNTPIARQVYITSTNDVTITHGLVVTTPRASANAIPVTNRTPLGLTYGGSGQVINTQTNYGPAGTPQQFMQPSPKDYQDFAFGLLPANADGQAFATPDPTNGLVDATTLLAAYGSVFIESAATHYYLCLHYALYTETVPESRG*
Ga0130019_1000086	Ga0130019_10000868	F010159	MSWQIPTQVEQDIIAGKATYRTFQTGNGGQSILPVPANSYVVIFGYDFSPAGGGIKVWANPTASFLGVLLNDTSIRWFETQQISFYTGTDFYPFIHHCDVKSVFTPYTIDAQDPSNNFAKTFKVSEEIDNTPIARQVYITSSNDVTITHGLILTNPVVTQNAIPVTNRTPQGLTYGGSGQVINTQTNYGPAITPQQFMQPSPKDYQDFAFGLLPANADGQAFATPNLNNGLRDSSQLLNAYGPTFGAASAANYYLCLHYALYNKPIPSKQG*
Ga0130019_1000362	Ga0130019_10003628	F008182	MPGVAVVNSGNYDLQIATGFQVDAFVLDDALKGVLDNIEYVLDGTTEFADVMDSVTNVMVRRGRRDVGDQFSAGTMTFTIQDVDGIFNPFDQNSPYYDTPQAKPGLAPLREVKLIRYSSTNVPESIFSGFVVNYDYNFALGGLDTVTVYCADQFYLLAQTYLDELNVTSETSGERIETVLDLPEVDFPASARAISTGTVNLGHDSHYTVPAGTNALQYLTQINETAEFGRLF
Ga0130019_1000923	Ga0130019_10009236	F095514	MKRILLSLSILYSFYGWSQNAAIAVPHAFQGTHFKTFKEQGETIRTWYEVSGRYSEDYMEVIRRIYQPNRDQTLRILDTYGDEGYTAVKIESRGWIYILIQSNAGISESKIQAREKEPRD
Ga0130019_1001386	Ga0130019_10013863	F041218	MGVIHKCLLGAAAVLAISCQPRWVNSGSYQFANNAQLVQRESLQILSYPGAISTGQFQQNLTLGDRGTLLTHIVFFSPKEGHIQRYQLVSTSSPSYAANFTDGLMEVYDGELGLYPNERLSLPAGPLYHPVMAPQYPLVVDAIWKLKVGQEHLLTMVQPPKGNISIASYYLAQKTAKERIYLYRNDSNVGTLTYQKKQGRWVLLKADLLNQDVPYIWERMEQP*
Ga0130019_1002237	Ga0130019_10022372	F085387	MRNLSFILGVARYAFTRLADIGCRVLAFKGEDMAPTTKTRAKPEPAQPIVTVEEIDEALLHTSLTAQRDETWHRWADALLDQRNRLARVGPRREIRVVSPDEYPEG*
Ga0130019_1002670	Ga0130019_10026703	F026250	MTQKEGIMTNRQKQAVVGIGMAIMWGFWLLPTAEDLPDAEPATSLEWKLFFALNFVAIIYIHILNVREHQQQLQMEAQERYWERMETRARHNHPTNRDYQ*
Ga0130019_1003377	Ga0130019_10033771	F046329	MNRRSACICFLACLKTSLVSSVALAAQEAAQEAARTISRIAGPRWNVNGDWGPSLDEIQGHLRSAHGIDPGTMGIEDLLTLHDNDHNRRGYQAAHGHKKAGKGQSKGYAKF*
Ga0130019_1004406	Ga0130019_10044063	F033789	MFDDLPSPFMVEGIKIWPCHSRAEFSHFIAYEGKPYYFRSKNAAILFAKDKQAIDDPEGLCD*
Ga0130019_1004610	Ga0130019_10046102	F049575	MKTTLSAADLMVIHNTLYKSLNVVGNSIWTQETRERVMDKVSIIMENMNAEVVCGDVEPIVVSGDDGV*
Ga0130019_1004808	Ga0130019_10048081	F084150	MAVLFANTKSIYPKRFASSWEQLKELLSFHEENAVKAAGALWSPVEYDQGTTRGNRNVRFVEALVVDM
Ga0130019_1004914	Ga0130019_10049141	F004573	MPDDIDNPLPLPENPATVAELLPHLPLPYNYARQYACVFSAELADRLTTVQAENPAQFRVTPLALTDGTFMIRGAILSEVPNGLYGGNFARLDASRFNEIALVPWAEAVALLPQPDPLPE
Ga0130019_1006520	Ga0130019_10065202	F073632	MNLRIAFACFGLATATALSAQTTTRHHELGIQLEQSYGFMYGVPMNFKTLYKVGASDKAVWRFQVGNMQFGRNYYEPSQQRSSWMSMGGSIGREWRKEMNADLRFFHGPLIGAEMSMSRSISEVPPGTDNNYFYIMPNLIYVLGIQYRINPALYVAAEIHPGINTQFNYNDGNWSPNRYMSGGMNGQSALLSVAYQFETYKKGKTRKARGIVQTPE*
Ga0130019_1007419	Ga0130019_10074192	F102825	SIGIPPMRQDDYVVPGRTGAVAATPWWGPRVVSFGGIVTGATRAAYQGNLKSLMSLVHNGGDTFTMSRTLDTAGTPTTVTHQATARYLGGLDSVNELSPNVGRVAFDVQLMDGYWYDAAYSALGTASISGTAVVPALGDAPTQDIEITYSIGPGTQRVTNTAYPGLSRLTVKPGNNTLVVSGGGSVTLKYKAAWL*
Ga0130019_1009146	Ga0130019_10091461	F000888	MSNQYFAQLDENNIVTSVHVVSREFLEANPERYQGVWVETFFDVEGKTYAGVGYTYDAELDDFVTPV
Ga0130019_1011311	Ga0130019_10113115	F097230	LVAKVKPNVPGARKYIGNADGAAKHKRAGMDEFIKQCIKHSGGVFWNNGSFTVRDMRGKPGVISVHSTGRAVDLSWHKKIGRASCRERV*
Ga0130019_1011524	Ga0130019_10115242	F083902	MRVAWVTHHIPRVEDRHEALLPGKYAGGAERNTDYMVTAAPPGVDVVYVEPGDADSAADGSFDRVVVGGTDKLSEASMHVLAALKPVVWVQHAQHRTPAKAVLFQQASRFLTMSRAHMAWEAEWTGRADAFIHSPVPPDQVSPKPKEPFALFAGRKHPAKGKLNARIWAQRHGVPLVELENADHDVVLDHMARAQYFVHLPKERDACPLVVIEATLAGCEIVTNSLVGRLEPGDPASILRQQPPRFWQIVEESA*
Ga0130019_1011759	Ga0130019_10117593	F049303	MLSDPVRILAVIAAIAVLVVPYLPAIGKRIAKLWRSLPSAPVPPANGIGVDDLTYVLGLANRLRLDGNEKATDLAKQLLDAMLEVPKK*
Ga0130019_1011759	Ga0130019_10117594	F021885	MNIFEKLRLLAEWSPLLTYMQTLAAEDDIHAKAVIVADALEWVATRTEIEWDDELASHVSDILVSEEGEAFVRWILEKIQVNDVE*
Ga0130019_1013401	Ga0130019_10134011	F024291	MATSAQGLSVTFASSGLTITSVQVQDTQELVDATHLGVAANARRLFVGGFASDREVTVDYISNTILTAGQSGSLVISAPISISGNATVSSASIGGSVGDFIRGSATFRLA*
Ga0130019_1014524	Ga0130019_10145242	F018511	MKVDSIWGELSTRIPAEYKTQVMATVDRTYRVLSIDPVDMDYLFYIYNNFVNHYEPERRNCPACRTKVVGKMRQIVNYWRDGNQ*
Ga0130019_1015784	Ga0130019_10157841	F029419	VNIPIERKGECQGNQDKCNLDGCPKFGTLGVAGRDGKRRVKGCSDPAARGKRSRRKGLNKQRTARKRLGVAPSHKFGDGNEERWNDALFANEVKAGKQIQPAVNAWIRIEAQVKSNEADFGSRRKPARTVLMPDDWGNEGLVMMRLSAWEEIVAPAMQAFYEGGDSAI
Ga0130019_1015962	Ga0130019_10159621	F017812	MAPISRKAQLQQFSWQVLEDLAFCSGRWPRLAELAAQVLFEQQAAAPAMPVDPELEALLPY*
Ga0130019_1016565	Ga0130019_10165651	F072826	WSSDVCSSDLNMRYFRTADDDLHESIRLQLDAAWGHPTNDGRTFTCIDPVAVAPRDLSGLVLLAVQDEFISYEPAATILPQLLASGAVEEISEAAFAAGVARPEQ*
Ga0130019_1018527	Ga0130019_10185273	F042640	MSSAARRDFDEWFVKHYEELVLTARRFHDSPRDLVHHTYLQCINALETNQNILDNLPGYFHTSMWNQAQNLFRKLYEIYETPTDTLVSDYDISEAIKKEEAMIMTNHLPWFDRTVLSLYLDGWSMAQISRESGINVSV
Ga0130019_1020904	Ga0130019_10209042	F097116	MSYSSPTKTVGDVYNVVKRIFGDESGVQLTNADIVRWINEAQVDISKQNQVLQTTATVAVTSGTATYALTSVTPKIDSIASLLLDGRRVGSIPISQAEESISLADPLGTETGSPQFWYAWGGDITFWPVPNKDYTMLIRYIAQPADVTSTSSDVLSLPDETFTDIVNFVLMKAYEMDENPQMMAV
Ga0130019_1021068	Ga0130019_10210683	F055721	MLDIIKEEYYKYIEENDTYPSHSHKWIVRTFTDTSDFNPNELFYRNFGTFETKEKAKEFIENYKVKYTTKRFITRYSIQGLCEELERHAR*
Ga0130019_1021885	Ga0130019_10218853	F071028	DKYTRLSQRRITGGTQTGAINPFLTDIARGVTLIYINGQIEATLYPYQDTLYDADWYILGGHTQEITDEQAAILIANGYGDYVEPIV*
Ga0130019_1023325	Ga0130019_10233252	F066267	AVLVALKPDAKNWKAGCEFMVDIDGHKYYKFRDSGDVPLVRYKEIQAVLIQLDNRLTSDELTSILAIARESVVAAIEGQSRKDRGKGLQQCLWAIQEAESRHKELGLHTDLIVELAALNLIRDDENPFEINETIQAEKLRLFKREFVNHDFFLSAGMNEFLPNAEQLADVWQQLWQASDQFQSKKKDILKSILGEIRSSIG*
Ga0130019_1023511	Ga0130019_10235111	F050494	MSDTLIIRGHYTGRTFVPDGPLPDAEGFAELVITPSVHRPTVSIADAFGTATELRSADEILAKSRADRDDWGDR*
Ga0130019_1026157	Ga0130019_10261571	F067543	MTPTVETSGYRISPRVVLQPGDLFKVAGGPYYRCHDGTRVPLAARGTFRLMEVIRHRSRVHLLAHGAEGWTLLHVEGRRRSPVPGLVARPYRIVRKLRKKLK*
Ga0130019_1028207	Ga0130019_10282071	F066592	MAESIDYNTDLEQLLKTHAEECESLSILHRNSYEKYNGRSNYINIPVIILSSAIGFATGIDIGYDNMNIILGVSSIFVGIIKSIDTYFQLGKRAESHRLCSLQFQQINKKIQIELALVRSQRVDAKDMMNIIKTDIKNLF
Ga0130019_1029860	Ga0130019_10298601	F045060	MNYDEWAAIGHANGWLGVRRNNGATSKAGAKSLTVRAGSQRAKLLATYYAHHFLTDEEAGNVSGLASLPKCCYWKRCSELRQAGYIKPNGKTRISS
Ga0130019_1030519	Ga0130019_10305192	F054802	MAIFNLIDEIADTSRNPHASIIRRLQTMKNQLSLNEPMPLYDVTTLDLAIKALQAHS*
Ga0130019_1031188	Ga0130019_10311881	F020346	RSSDLAALWRSRGSIENTYATFDGMGTATQQSLTPIVKQLLGIPRPAVA*
Ga0130019_1036923	Ga0130019_10369232	F004573	MPDDIDPVPLPENPQTVAELLPHLPLPYGYAKQWACVFSEELADRLVEVQESLGGLQFRVTPIALTDGRFMIRGAILSETAANGLYGLPFSLLDASRFDEVAILPWADAMALRPQPDPVEP*
Ga0130019_1039573	Ga0130019_10395731	F058819	LAGRIVFTDNGGTTAETIIDFLNTTANNDMYSLSVGAANIFGSSAIFHAGNFPTSPTAYNYYSVSVGYYDGTYTARSEVIDINIEPACNDDVELHWFGKHGGAESYQFRGLIQDLQNANADIINISQPWNVAASPRANSFDKTIIKTNQRVNKRKQIKCSIPHEDAVYVASLFYSPEVYIIEGGKYVNVTISNAEILTDDNRATD
Ga0130019_1039944	Ga0130019_10399441	F080982	MTSQSPRIYIYKIIFEEVPYYYYGVHKERKYDEYYMGSPVTNKWCWELYTPKKQILELFEFSDKGWIEAQEVEKRIIKPFYNNDKWCLNEHCGGKIS
Ga0130019_1042062	Ga0130019_10420621	F074785	MVAGLRDALATKVNLVDDAERVVFALRPNLVKGWMQGQKPALLTMWEPNWLPPEFSEYLHYFDTVVVPSLHNWELFSQFHDNVRVIPLGVDRDVWCPKERPQNDKFKILCGGSEWYRKGLDVVLKVFLKMNLPDAELHVKIVPPYLSAPDNLNYPNVVVHNQWM
Ga0130019_1044930	Ga0130019_10449302	F048951	MKTKTRTRNGYIYPATALLKQFPDDMWASTIGERLGVGRAAIQTWREGNTYLDQWRADKYACLLGKHPSEIWTNWFDEVELAS*
Ga0130019_1045115	Ga0130019_10451151	F077210	FYEQVRGLMSVEAPSTLGRVFSYYGYVATFIADADLVKSITVSP*
Ga0130019_1045115	Ga0130019_10451152	F003927	MATYSVTNKYLIDNYAVLQLLTPSEIAVGQSITVAGVDATFNGTYTVRALPQYLYLGVDTQGDLLYDYQIPIADQVLYAKTADDVERVAASGTVTYEPVCTWVTAAQVMTYLGITITNPSDDYTLLTQSVSAGNQFCYRR
Ga0130019_1047200	Ga0130019_10472001	F021520	PEMRTMVVVRWHDAHSATDTWTPITDIGTDPCEVVSCGFLLPTSDGGKEDHITIFQSKTDADDVDGVLCIPVAMVQDMKVMTKNIPGLAPETLANKGSKKS*
Ga0130019_1047544	Ga0130019_10475441	F090088	MDKEALGRRVFMEFYSTFILDDEIEDTGRVFYLAQKASIIHLKLIRGVLQSDEYIINMAFLNDV
Ga0130019_1049568	Ga0130019_10495683	F001968	HDALPICEIADAPGEIFDLPELRDLEEEKFDVNEYLNSNYDY*
Ga0130019_1050736	Ga0130019_10507362	F089902	MTERAQKLIEEVWQERNTWADTEQKLVAAIIRKAIEHVKTMTASRMNNLTVLDKGDMMTLSKELENLP*
Ga0130019_1052062	Ga0130019_10520621	F043342	LPVEHEGKWTPFMFAWPRQRDGVVRHTLKWSAIKANVFFSPALFKAANPAKENVLGSYVLWVDFDGNAPEEWAQEPEEGSIFIPPPTLIVQSSIEGHNHCYWKLDKFIDDIEALEDRNRAIAYVMHADTSGWDADQILRPIRTTNHKRNMPVYPYTVSRTIELSLQSSFQLSLTVLVRYR
Ga0130019_1054361	Ga0130019_10543611	F019132	GARDIATGTVDLGSVGAYTVPEGTNVLQYLTQINETAEFGRLFISREGILTFQNRIGTTLSAPVADFHDDGTNFPYDGVGISFEADSVVNRAVVSGLSGSSHTATDAGSIATYFIQTVSITNSLLHNAGQIQDAAEYLLNPEPEPRYTSVATKFLMLTTAQKDTLATVDIGDTISI
Ga0130019_1055629	Ga0130019_10556291	F061662	MPGVAVVESGNYDLQIETGFIVNSFTLDNVTSGVLDNTFFVLDGNTEYADVLADCTNVFVRRGRRDVGDQFSAGTMTFTIRDVDGIFNPFDNNSPYYDTPQSKPGLAPMRKVQLIRYDQTDTPEYLFSGYVVNYDYNFALGGLDTVTVYCADQF
Ga0130019_1058431	Ga0130019_10584311	F080651	IYSLSLHDALPIYGKRFVGLSSQIGRKQFKRVFQEGLDAGGWPIKPEYSTKPISIGPNQTPEKSTARFYEGGYKEFKRALGRGKMVLFRLFSQMYLQSIVNPELRISDTGFVITTGMTYNAGNPKGKVDALLDKYGDAFKFSDAERKEFTERAEQIVVDLFK*
Ga0130019_1058723	Ga0130019_10587231	F058806	MSWQIPTQVEQDIIAGKATYRTFQTGNGGQSILPVPANSYVVIFGYDFSPAGGGIKVWANPTASFLGVLLSDTSIRWFETQQISFYTGTDFYPFIHHC
Ga0130019_1059867	Ga0130019_10598671	F000040	LHSFPTRRSSDLAEEAIEMLKADIQKNEADAARLTKEIAEHDEDISVWNGDMKAATKVREIENTDYAATHKDYSESVDALERAIVVLKKQAHNRKQASLVELSTLKGLNLIPTSAKKAIDSFLAQDPEDTPAGLDVTAPDAAGYKFASHGVIEMLEKLHDKFIDERTT
Ga0130019_1060073	Ga0130019_10600732	F002794	MECNTISEGVAWNQGELSEETRKLVLERTEMINHNMAIFNLIDEIADTRQNTHASIIRRLQTMKNQLSLNEPMPLYDVTTLDLAIKALQAHS*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009564: Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; RNA IDBA-UD

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences