| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300006646 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123868 | Ga0099770 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A3_L (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 105371047 |
| Sequencing Scaffolds | 9 |
| Novel Protein Genes | 11 |
| Associated Families | 10 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila | 1 |
| Not Available | 5 |
| All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta | 1 |
| All Organisms → cellular organisms → Eukaryota | 1 |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Klosterneuburg, Austria | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F001758 | Metagenome / Metatranscriptome | 640 | Y |
| F004023 | Metagenome / Metatranscriptome | 456 | Y |
| F025291 | Metagenome / Metatranscriptome | 202 | N |
| F025295 | Metagenome / Metatranscriptome | 202 | Y |
| F039594 | Metagenome / Metatranscriptome | 163 | Y |
| F052619 | Metagenome / Metatranscriptome | 142 | Y |
| F059886 | Metagenome / Metatranscriptome | 133 | Y |
| F070166 | Metatranscriptome | 123 | N |
| F093948 | Metagenome / Metatranscriptome | 106 | Y |
| F105419 | Metagenome / Metatranscriptome | 100 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0099770_1021328 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila | 543 | Open in IMG/M |
| Ga0099770_1060655 | Not Available | 506 | Open in IMG/M |
| Ga0099770_1277017 | All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta | 731 | Open in IMG/M |
| Ga0099770_1277082 | All Organisms → cellular organisms → Eukaryota | 620 | Open in IMG/M |
| Ga0099770_1278192 | Not Available | 1016 | Open in IMG/M |
| Ga0099770_1283551 | Not Available | 685 | Open in IMG/M |
| Ga0099770_1297252 | Not Available | 821 | Open in IMG/M |
| Ga0099770_1299651 | Not Available | 870 | Open in IMG/M |
| Ga0099770_1305874 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 582 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0099770_1021328 | Ga0099770_10213281 | F059886 | VIYASRAAFAVLRGGRHQLSPTFPRSPGIIPAVLSVAPFRPLRFD |
| Ga0099770_1029325 | Ga0099770_10293251 | F001758 | VTGERSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER* |
| Ga0099770_1060655 | Ga0099770_10606551 | F025295 | IMVTGPGDATELLRRREVLIPEKLKFLTRKSNLQKPI* |
| Ga0099770_1241957 | Ga0099770_12419571 | F004023 | FSFLIIQLVVFLGLVLCCTHLSEITLTIAANALHTIFFFKGKAY**LFTDRFLNTDTLVRLAYLHYVSAFFLAFLGVIHGTDMHYD*KNEDTCEGIRIEMI*WDEALLNEFSKTIDIIFLIGFFCFFLYEMPEALIYEIFMWGDVGFINDIRFYGVAPH*YFRPLMA*LLVCPFHKLGIAGLVFFFVVLFF |
| Ga0099770_1277017 | Ga0099770_12770171 | F039594 | PQSMRWRVVVTSGEGVLVTVRNHRCPLQATWIKEVWCDAAYFDRPWMCDIEILTRAAHPGDNVYFVAVYGKNATYSIAFWRGRENCHAFTGSGRDDGLNFCAGLVPYATWRWDNYDNLDKEAHCFYEDLYNHFKCQPCWNGVSRECNATLQAFACYESFRKCDKNGFAVGTCKDSCEAVVYECANHFDSVNLEHYNCSSSRYIDGGASECAGNENFSSFSSETQLFLEDDPQLILFKSSPTAA |
| Ga0099770_1277082 | Ga0099770_12770823 | F093948 | MAVLFPKKVTAIFNPFGGISQILDLMLFGIHSTKYDEFLF* |
| Ga0099770_1278192 | Ga0099770_12781923 | F052619 | VPITARSQNKRGASRRVSQNKSSGQSSFTMNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNERHYAIKVAVPPTGVAMTFRSRVKFFVECANVN* |
| Ga0099770_1283551 | Ga0099770_12835511 | F025291 | MVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKATTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK |
| Ga0099770_1297252 | Ga0099770_12972521 | F025291 | KHHMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK* |
| Ga0099770_1299651 | Ga0099770_12996511 | F070166 | NVVLSGVVMNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQLVGSEFGNLERESTELILKLMKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRHKV* |
| Ga0099770_1305874 | Ga0099770_13058741 | F105419 | RMLGTTTRTLGAKDTIMRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPERQY* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |