Sample 3300002965

3300002965: Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV

Overview

Basic Information
IMG/M Taxon OID	3300002965 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110176 \| Gp0088375 \| Ga0008063
Sample Name	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	204240100
Sequencing Scaffolds	65
Novel Protein Genes	67
Associated Families	55

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria	7
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	2
Not Available	28
All Organisms → cellular organisms → Bacteria	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Affecting The Dissolved Organic Carbon Pool
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Affecting The Dissolved Organic Carbon Pool

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	South Atlantic Ocean
Coordinates	Lat. (^o)	-37.9728	Long. (^o)	-44.9905	Alt. (m)	N/A	Depth (m)	2502
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001756	Metagenome / Metatranscriptome	641	Y
F003930	Metagenome / Metatranscriptome	461	Y
F005684	Metagenome / Metatranscriptome	393	Y
F007241	Metagenome	355	Y
F008912	Metagenome / Metatranscriptome	326	Y
F012125	Metagenome	283	Y
F013190	Metagenome / Metatranscriptome	273	Y
F020717	Metagenome / Metatranscriptome	222	Y
F020787	Metagenome / Metatranscriptome	222	N
F023452	Metagenome / Metatranscriptome	210	N
F024127	Metagenome / Metatranscriptome	207	Y
F025141	Metagenome / Metatranscriptome	203	Y
F029236	Metagenome / Metatranscriptome	189	Y
F032810	Metagenome	179	N
F034336	Metagenome / Metatranscriptome	175	N
F038276	Metagenome	166	N
F040684	Metagenome / Metatranscriptome	161	N
F045995	Metagenome	152	N
F047119	Metagenome / Metatranscriptome	150	N
F049047	Metagenome / Metatranscriptome	147	N
F050430	Metagenome / Metatranscriptome	145	N
F052659	Metagenome / Metatranscriptome	142	N
F054935	Metagenome / Metatranscriptome	139	N
F055778	Metagenome / Metatranscriptome	138	Y
F057445	Metagenome / Metatranscriptome	136	N
F062154	Metagenome / Metatranscriptome	131	N
F063768	Metagenome / Metatranscriptome	129	N
F066848	Metagenome / Metatranscriptome	126	N
F066857	Metagenome / Metatranscriptome	126	N
F066858	Metagenome / Metatranscriptome	126	N
F068928	Metagenome / Metatranscriptome	124	Y
F070217	Metagenome / Metatranscriptome	123	N
F071317	Metagenome / Metatranscriptome	122	N
F071644	Metagenome / Metatranscriptome	122	N
F074984	Metagenome / Metatranscriptome	119	N
F076171	Metagenome	118	N
F080484	Metagenome	115	N
F080654	Metagenome / Metatranscriptome	115	N
F081452	Metagenome / Metatranscriptome	114	N
F082562	Metagenome	113	N
F083802	Metagenome / Metatranscriptome	112	N
F084730	Metagenome / Metatranscriptome	112	Y
F086145	Metagenome / Metatranscriptome	111	N
F087316	Metagenome / Metatranscriptome	110	N
F089571	Metagenome	109	N
F090504	Metagenome	108	N
F092215	Metagenome / Metatranscriptome	107	N
F095628	Metagenome	105	Y
F096028	Metagenome	105	Y
F097507	Metagenome	104	N
F098669	Metagenome / Metatranscriptome	103	N
F099440	Metagenome / Metatranscriptome	103	N
F101292	Metagenome / Metatranscriptome	102	N
F101330	Metagenome / Metatranscriptome	102	N
F101338	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI26063J44948_1000384	All Organisms → cellular organisms → Archaea → Euryarchaeota	11617	Open in IMG/M
JGI26063J44948_1000620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9440	Open in IMG/M
JGI26063J44948_1000714	All Organisms → cellular organisms → Bacteria → Proteobacteria	8874	Open in IMG/M
JGI26063J44948_1000724	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8774	Open in IMG/M
JGI26063J44948_1000905	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	8043	Open in IMG/M
JGI26063J44948_1001009	Not Available	7598	Open in IMG/M
JGI26063J44948_1001508	Not Available	6321	Open in IMG/M
JGI26063J44948_1001752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5889	Open in IMG/M
JGI26063J44948_1001861	All Organisms → cellular organisms → Archaea → Euryarchaeota	5710	Open in IMG/M
JGI26063J44948_1001965	Not Available	5580	Open in IMG/M
JGI26063J44948_1002555	All Organisms → cellular organisms → Bacteria	4916	Open in IMG/M
JGI26063J44948_1002612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4872	Open in IMG/M
JGI26063J44948_1002848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4664	Open in IMG/M
JGI26063J44948_1002893	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	4627	Open in IMG/M
JGI26063J44948_1003598	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	4129	Open in IMG/M
JGI26063J44948_1004249	Not Available	3786	Open in IMG/M
JGI26063J44948_1004944	All Organisms → cellular organisms → Bacteria → Proteobacteria	3487	Open in IMG/M
JGI26063J44948_1005255	All Organisms → cellular organisms → Bacteria → Proteobacteria	3376	Open in IMG/M
JGI26063J44948_1005849	Not Available	3190	Open in IMG/M
JGI26063J44948_1006715	Not Available	2956	Open in IMG/M
JGI26063J44948_1006986	All Organisms → cellular organisms → Bacteria	2894	Open in IMG/M
JGI26063J44948_1007776	Not Available	2723	Open in IMG/M
JGI26063J44948_1011375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2185	Open in IMG/M
JGI26063J44948_1014388	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1885	Open in IMG/M
JGI26063J44948_1015101	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1829	Open in IMG/M
JGI26063J44948_1015270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1818	Open in IMG/M
JGI26063J44948_1015831	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
JGI26063J44948_1018163	Not Available	1619	Open in IMG/M
JGI26063J44948_1019548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1540	Open in IMG/M
JGI26063J44948_1019689	Not Available	1533	Open in IMG/M
JGI26063J44948_1020238	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
JGI26063J44948_1022337	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
JGI26063J44948_1022981	Not Available	1377	Open in IMG/M
JGI26063J44948_1024195	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1332	Open in IMG/M
JGI26063J44948_1027179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1228	Open in IMG/M
JGI26063J44948_1027366	Not Available	1222	Open in IMG/M
JGI26063J44948_1028954	Not Available	1175	Open in IMG/M
JGI26063J44948_1032171	Not Available	1095	Open in IMG/M
JGI26063J44948_1032293	Not Available	1092	Open in IMG/M
JGI26063J44948_1034130	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
JGI26063J44948_1036370	Not Available	1005	Open in IMG/M
JGI26063J44948_1039805	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
JGI26063J44948_1044000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
JGI26063J44948_1044402	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	875	Open in IMG/M
JGI26063J44948_1047230	Not Available	838	Open in IMG/M
JGI26063J44948_1052903	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	775	Open in IMG/M
JGI26063J44948_1053783	Not Available	766	Open in IMG/M
JGI26063J44948_1055419	Not Available	751	Open in IMG/M
JGI26063J44948_1057829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	729	Open in IMG/M
JGI26063J44948_1058794	Not Available	721	Open in IMG/M
JGI26063J44948_1062097	Not Available	695	Open in IMG/M
JGI26063J44948_1062681	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
JGI26063J44948_1063805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	683	Open in IMG/M
JGI26063J44948_1066470	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
JGI26063J44948_1074420	Not Available	615	Open in IMG/M
JGI26063J44948_1079449	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
JGI26063J44948_1080246	Not Available	584	Open in IMG/M
JGI26063J44948_1083699	Not Available	568	Open in IMG/M
JGI26063J44948_1090551	Not Available	540	Open in IMG/M
JGI26063J44948_1091046	Not Available	538	Open in IMG/M
JGI26063J44948_1092176	Not Available	534	Open in IMG/M
JGI26063J44948_1095798	Not Available	521	Open in IMG/M
JGI26063J44948_1096343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	519	Open in IMG/M
JGI26063J44948_1097590	Not Available	515	Open in IMG/M
JGI26063J44948_1098962	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI26063J44948_1000384	JGI26063J44948_10003843	F005684	MRGTCAHGCEGAGGLLTVYDTEESPLSVMQVVRRKSEAREGRLCNRNEPRQAYYEPARGRFPDRGWNEHPRRSKSKQVCMASTGPGRTHS*
JGI26063J44948_1000620	JGI26063J44948_10006203	F083802	MKDAITITKTEIQKGKIGHSKWLKHKESRFNSLFPKRLEKVYSTIRSLSKLSNRNNYFYETSNIFTALSSIVFELRELAASYGLESSDIKIDIYSLSNQQKNLKLQTDDIKNNDAKDFASELLELIEQKIKTEEKLHSEINVLKRELSFLRDKVESQXWSSTRNFT*
JGI26063J44948_1000714	JGI26063J44948_10007148	F050430	MDKKLKENIIVGIKIVGMLFFLIVLITTLILPGGVDTLANLFQ*
JGI26063J44948_1000724	JGI26063J44948_10007243	F054935	MKRRTFLKYTSLISTAVFLPLTQLFGAKPKPKNPYTTFDFNLPLQGSPFRKNCDSLDNYNDISFKTMMEDIVHYRTPAKLRDKLILGIKTEDD*
JGI26063J44948_1000905	JGI26063J44948_100090510	F101338	LYFHSYIFSLSIAVLGLVARAPAVYMPFFKRILCEGIISAVFLRLEIQVFVPYLTLLTLLTGVQ*
JGI26063J44948_1001009	JGI26063J44948_10010092	F029236	MEMKDNSDFMNDAMKMIEEWLASSKAWFEXXSXRLKLEAETSXWXAENEVFSPEAGCYGWEFIDEWL*
JGI26063J44948_1001508	JGI26063J44948_10015081	F052659	MLLSGNPGTETRSAVFIDGRLISSLPELNYQTIDKLQQGGVPDKVSWMKPSLRGRLRLVKLQAQERNLTIEDLNQSIRSKWVILWAEV*
JGI26063J44948_1001752	JGI26063J44948_10017526	F050430	MDKLKENIIDVIKIAGMLFFLMILIGTLVWPGGVETLINLFQ*
JGI26063J44948_1001861	JGI26063J44948_10018615	F005684	VYDTEESPLSMMQAVRRKSEVREGRLCNRNEPRQAYDDPVRVRFPDRGWNEQPRWSKSKQVRNASTGPGRMQS*
JGI26063J44948_1001965	JGI26063J44948_10019652	F057445	LQKLSKAAVNEILPKAVSLILIKERLENKRKKDFLDLCDLFSVAPDVIKIM*
JGI26063J44948_1002555	JGI26063J44948_10025553	F062154	MQSRRNAVXANGVKVLSVVNARPEQPVNSVANGVRXPSVVNVRPEQPVNSVVNARPERLVNRVVNGVRAPSVVNVRPEQAVSVDRSPVAVVVREDQVVLCGCSL*
JGI26063J44948_1002612	JGI26063J44948_10026127	F071317	LKKITAVGLITLFAGVTAAPLIHLDECNMPCCAGLATSCCDMDQEVACPTISDCGSSIFVLIVLGPFHKSELKSSDSISQRFVTDLDIFKIETNYVTSFGNYDPGPMASLNLPLLI*
JGI26063J44948_1002848	JGI26063J44948_10028485	F049047	MLDTNDFIKEQLSSTPFHVRLGLTFIGFIFLCFILAIKSVQSFKKEKHSDGSIILSVIPLNKYLSSFARVYRTLIVLAFYEHPKVIKIIDSQHGVTRKLD*
JGI26063J44948_1002893	JGI26063J44948_10028932	F089571	MLKNIIVIVFSVLFLVVPASSQHVQQKYAITDKDEKVILNDNGTWEYAEEDKQNYYYKKVPPKTYNYEFKSQTWEERIEQAAHEYWRIRAHAELEQLGIPVTRYDPTTSDVPLYLKLEGGRIRTDXDSFTPLAXGEVIDISGLWDPDKGDNPTLKIQGKLFLQITMKLDDQKKLFSQYNQRNYIPIPDDFQRILEFRDSLDVISLGMHDYNRDNTHIWPGIPHSFLYAPPGSYYDPNNPPIIHGDGFPYIQRGHLTLXRREIPMTNSVYDNLLKRIDNLEGHGPIKIRYDMGKGIIETVTFEEVWLKINPYNGDPTHILKNVSLKKLE*
JGI26063J44948_1003598	JGI26063J44948_10035984	F038276	MNLDFLLRLTNYVNNVGTNYLAVIKQFLTVLVIINHACVLLHGNHNYKDVFYDRLSNQYIRNACDFHNLHISCNNLGLVLEKFLLDVKIINNKV*
JGI26063J44948_1004249	JGI26063J44948_10042493	F066857	MCRLSCRRLDYLHDWQKKMEEVIDIFLITKGNVQFLDVFCIFQCQQNKGFSHFLDTDSKLTVYRDGVVRPSRKDNILLPVVFDEFSAMP*
JGI26063J44948_1004944	JGI26063J44948_10049443	F066848	MRFSTRSIHSLRHPQDDVYRAVSREVGPGFAMGSSDPVLRTVLKGARQIAADQRLPVDPVAQSADPELDLVA*
JGI26063J44948_1005255	JGI26063J44948_10052551	F092215	MGAFLMSQTPNDIALAETFHHSEDISGIRQGAGLIQLTEAHYAPFVDDDYCPLAGPALLVPKVIRLADLALRMEVGQLGIGKATERCAPSTVGRNCVATYAQDLSIIILEPLVFLSERGRLRGSTRGEVEYVERKNNYLLALVVGQGNVPIGGGKFEIGGYIANFCRHIPAFIK*
JGI26063J44948_1005849	JGI26063J44948_10058493	F038276	MNLDFLLRLTNYVNXDIEIYLAITKQFLTVLVIINHACVLLHDNHNYKDVFYDRLGNRYIRNACDFHNLHISYNNLGLVLEKFLLYIKIINNKV*
JGI26063J44948_1006715	JGI26063J44948_10067153	F008912	VKNLVVTLGITGCGKSTWLKDKSPVIETDDLRVELLDDISNVTQEGFIFGTAAKRISKLFDTHDTVYFGATLVDSKHRIPFLQSIKDMCKHKFVIEMIIFPGIPELSKERIAKALKDGIQRADSIQFVDEQYEQYLHTISILDDEKDFYRMIKRVDNPNDEARKINNTVEDISEKLDMIIEQNDQD*
JGI26063J44948_1006986	JGI26063J44948_10069863	F063768	MDLHATPDPLTXAEGVAEFVVLAELSTALSERLGXWSTDGADPDSSATMASLAARLDEHSTWWTGRIPESVLLEGERTAASGSGQLAEVLGLLDVAASDRRAAVXPVLDRLVAYLVALAERLSPLGDAPALRTIRLVLADLEDRPR*
JGI26063J44948_1007776	JGI26063J44948_10077763	F040684	MKRVIYLIILAMSLTLVFSQGKPCCKNKSGKGKVACKFNRANIDVNKDGTVIEDGTQIAAAGVQCPLSAQNTSINKKNCTNCAKSPWWKFWGKKKGCCNTNS*
JGI26063J44948_1011375	JGI26063J44948_10113752	F081452	MIPVLSPAQVAREDGLIFNTSRTFKDPTNLNIIISDKVA*
JGI26063J44948_1013371	JGI26063J44948_10133713	F066858	DAKRTSANKILKISGDRSEDMNAPSTVPGTAINPSFQPRESSMRFCLAYTAVDATELLNTANKLLLTASVGENPTNVNTGTIIIPPPRPIIEPNRPATNPSGMSQILSINVLG*
JGI26063J44948_1014388	JGI26063J44948_10143883	F101330	MWLQNNYTVSLCGFIGVCIGYFTGHQEICIMIGVGIGIIIRFVQSKSK*
JGI26063J44948_1015101	JGI26063J44948_10151012	F070217	MNPKQLLTYLFIISSFAFSQNAAEKDSTIAVQTASQAVEDTTQAVVDTSKVEPDQIEKISTMVLANRITNVSGFERMIIGDLLGDEMMETSAASMVISEGQAKEAMGAAFDPNCFSDSCAISIGKSFNLSNVITFGIINIRKIANPAEADTLLAVKDSIITATIIMKNFHIGTGQVVSEMTFPFEGDTDKLLMTARRMVWSSVGVEPPPGRFPEDLIDNRVSLKKRILDFYYGTVVPWVQDNTEMTMIVGGILIISGGWLIFGGGGDG
JGI26063J44948_1015270	JGI26063J44948_10152702	F020717	MTRKQSEIFDISIVACTRFLALLETTQCXDFLRPHHILHENKDIRCFRDLNEQKDISISALKLMLSEN*
JGI26063J44948_1015831	JGI26063J44948_10158311	F076171	FFRVIKGFQKPGFGFFEKIANAFPDLNLSWLLIGEGEMILDRVNDAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENNEADIQKLISLDAEYIKEFFTNTNE*
JGI26063J44948_1018163	JGI26063J44948_10181633	F012125	MKPDSGRKSFFSAGKPKNLPAFYFLVVAGIILMVLLFKWFD*
JGI26063J44948_1019548	JGI26063J44948_10195481	F084730	VEPVFTVGYFSYLNCIASGVYLYDLGNRIYGYGAPKRALIFFQ*
JGI26063J44948_1019689	JGI26063J44948_10196891	F013190	EMSISATCDGSIPLNEMPSTVASKVASSTKVDIAEIIAFHSLEVFVLAENSNLIK*
JGI26063J44948_1020238	JGI26063J44948_10202382	F066848	MRFSTRSIHSLRHPQDDVYRAVSWAVGPGFAMGSNDPVLRIVLKGARQIAADRRLSVDPVAQNAGPESELDLVT*
JGI26063J44948_1022337	JGI26063J44948_10223373	F003930	GIGGDWFLVAGDVRSDDPADVRPPADFMPDLARHTSQGGILWIFALD*
JGI26063J44948_1022981	JGI26063J44948_10229811	F080654	YGRWKKKTRIQDSKKVNAEILETVVAEVISEESEPVGKTNLEERKDLWNKIQKFNPEASAMDYYDNDEWDLEKMRSDLKVLLEKERFGR*
JGI26063J44948_1023515	JGI26063J44948_10235153	F020787	MPKVRFEIYSTERGKKLIDLGELLVESGYLQSFDLDEEETEVVFNFEVNAGFDVEKGEINMEELRSYFDAADDVGKKFTDELLRSVFDLDDTGHIWKS*
JGI26063J44948_1024195	JGI26063J44948_10241952	F034336	MKINVKVLSAFLLIVNLYAVENPEDVKPTIQNGKGLFVLLDDTSWISQIVAEAYILGTIDGIITRKRPLRALCGNKVDKALLTIPNGIEIERIISIVHQFLKDNPENLYKPSIALIRQSLLRAFDQYDIAGY*
JGI26063J44948_1027179	JGI26063J44948_10271792	F001756	MDSSFLILGLNIPKKKLCPKLEKNVNIKPNIITFKLKLLNIFFYDL*
JGI26063J44948_1027366	JGI26063J44948_10273662	F023452	VKQVKPASIPIAPKKPLIKNNLVLFIFIAARPVNFNIGSITIKANRFRKKTTSRICKFSDAFLTKITIIEKKTIDKIFKIIALV*
JGI26063J44948_1028954	JGI26063J44948_10289541	F047119	MQTENEYFNLTMPDNERPISGFYRGWCSQYGXXXSWQGTYDQYTPLDVCPWCHGDHTCDVGRVVPLLNPEEIEHDLDENGHRPDEVNVYPGVPGDFRPIVYIYLDELPPGRSWADIIRNRQMRHIAMRQHTTEVHFFARTRESMSWQLSDTRNVMTQSITNWLRFTDPSFAGVITFRTRDGRINRRY*
JGI26063J44948_1032171	JGI26063J44948_10321713	F074984	AEIIENTMRELTDEEKKTIESQIKDNENIISKGFDKIKSRTMEMGKLINETKDSEGIKKSFIEVIKAMILIDGVIHKNEKTMFNELCKLWDVESALEIK*
JGI26063J44948_1032293	JGI26063J44948_10322932	F008912	MKKLVVTLGITGSGKSTWLNNKNPVVETDDLRIELLNNIDDITQERLIFNTAAKRISKLFCAYDTVYFGATLVDSKYRISFLQSIKDMCKHEFVIDMVIFSCLPEVARERITKDLKAEIQRANSIKFIDEQYEQYLHTMDILDDEKYFYRMIQKRK*
JGI26063J44948_1034130	JGI26063J44948_10341302	F024127	MIYKLTPKKSRDVKTLIEAETKKAAILYFAALLHLSADDLLQIYKIR*
JGI26063J44948_1036370	JGI26063J44948_10363701	F099440	VQLIKLKNQVLNGVNLIDENGRKIMVCGLHNTEQEKYIENFSQWTCNLLASCIIYID*
JGI26063J44948_1039805	JGI26063J44948_10398052	F101292	VIKNANAVMANVPAKDVKRENPATVTVIVPAVKKNAAALNKIELL*
JGI26063J44948_1044000	JGI26063J44948_10440001	F096028	SHITISVDFRVDWASFELIDGDFHSHSFGGSVKWNDLMLEEN*
JGI26063J44948_1044402	JGI26063J44948_10444022	F055778	MFNNVDFPEPELPTIKTTSPCSIEKDTSSRALTLLSPSP*
JGI26063J44948_1047230	JGI26063J44948_10472303	F012125	MCYNVMKPDSGKHSFFSAGKPKNLPAFYFLVVAGIILMVLLFKWFD*
JGI26063J44948_1052903	JGI26063J44948_10529031	F025141	VLYYMIQCEYCPRGFIDTTNGLAEKTFHELLHEPEVVNK*
JGI26063J44948_1053783	JGI26063J44948_10537831	F045995	MWTNNIVTFYGADEDLKKVAERLYSPGETSEEDNCFDFNKIIPFPNELSYIHSSRFNSGKKMIHGREYEQWYYVNSDGKMIENNPDNYFEKSRLKGMSSRMEKQFMRKYGALNGTDWRAINWGTIWNSNSGPGEKYREKLVYNFRTNYGSARLIVLEIESMIYRGEFPKVKMMWEHDNVDVHLCFMEDDEYVPDPTPVFTVGFAETEKSTAEYYKW*
JGI26063J44948_1055419	JGI26063J44948_10554192	F090504	MEVFVVLTIIFGLILPYWAGVMAKRKGKSFVLWCILQVLFLFPIVLIAFHSPVEKEK*
JGI26063J44948_1057829	JGI26063J44948_10578291	F063768	GVAEFVVLAELSTALSERLGGWSTDGADPDSSATMVSLAARLGEHSAWWTERIPESVLLEGERAAASRSGRLAEVLGLLDVAAPDRRAAVVPVLDRLVAYLGALAERLSPLGDAPARRTIRLVLADLEDRPG*
JGI26063J44948_1058794	JGI26063J44948_10587941	F068928	TVATPQDNIIETLEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN*
JGI26063J44948_1062097	JGI26063J44948_10620971	F047119	NVMLTENEYFNLTMPDNERPISGFYWGWCSQYGNDLSWQGTYDQYTPLDVCPWCHGTHTCDVGSVVPLLNPEEIEHDLDENGHRPDEVNVYPGIPGDFRPVVYIYLDELPPGRSWADIIRNRQMRHIAMRQHTTEVHFFARTRESMSWQLSDTRNVMTQSITNWLRFTDPSFAGVITFRTRDGRINRRY*
JGI26063J44948_1062681	JGI26063J44948_10626812	F076171	FFRVIKGFQKPGFGFFEKIANAFPDLNLSWLLIGEGEMILDRVNDAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENTEADIQKLISLDAEYMKEFLTQKNEE*
JGI26063J44948_1063805	JGI26063J44948_10638052	F063768	GVAEFVVLAELSTALSERLGGWSTDGADPDSSAAMASLAARLGEHSAWWTERIPESVLLEGERAAASGSGRLAEVLGLLDVAASDRRAAVVPVLDRLVAYLGALAERLSPLGDAPARRTIRLVLADLEDRPR*
JGI26063J44948_1066470	JGI26063J44948_10664702	F098669	RLKEAEGLGRKRRXEEAERRELHESDQGLDPGHGLNPGRKVRRIDQAMEGSPEIVPAKIRKKPCLGRVFFVLNFIPGKLNNSD*
JGI26063J44948_1074420	JGI26063J44948_10744201	F080484	SCIYIYLGFGMALQLTVGLSDHTINAHKDPNANNILDSFAGIFTALHFFDVYTQTKKYNKNLSISIFGQKTPPSTLGTIFPLKTNYIHYFNFFGVPNHRTGIGMFGYSITKRTKKNNEYYMGIGTXIINLSITAGWKYYFKKSNADDYYLAMSLVGSTLEIDDRYDETKKVSKDFIAGNFSAGYEKRLSKNIYLNMEIFTLTGIM
JGI26063J44948_1079449	JGI26063J44948_10794492	F090504	MMVVFVILAIIIFGLILPYWAGVIAKRKGKSFVLWCILQLLFFFPIVLIALHSPVEKEK*
JGI26063J44948_1080246	JGI26063J44948_10802461	F082562	IILMKTIILGILITLSTNLFAQTNDSLRNYFLDIELSIIHPILGGFGGTIGIERNHSSFGVMGFGTKLNHMMKHYFIEDAEELAVYNWGVELYSDYYIKQNHRGLFIGSLVSINGFRFTDIPNPQTILVLYAVPRVGYRICLPKKLNAFYFQPSLTAHIKFWDNQEQFLYREIDTKSIFLLSQLTLGMKI*
JGI26063J44948_1083699	JGI26063J44948_10836991	F071644	MEKTRNPRFTGVLIFAGLWNLCIATWALFFTDMFIQVLALEGRGVSKVFQTIVGISGIMFILSGLNNARFRFIIAIAVPGKILXFLGSANXXLAGQAGVGIMFIGLGDLLFTIPFIMYLRATRQFGWI*
JGI26063J44948_1090551	JGI26063J44948_10905512	F095628	MVYMYSMNVNFCIRNARAALVMKYGNEPFYDLRASSYAYKMW
JGI26063J44948_1091046	JGI26063J44948_10910461	F097507	MKYCVVVAEKMHKKEKLGVLNWSDEWDKPCLIEQVQMRIDTGWIPIGGVSYGEHEAFSEKVWAQSMSKEEDSEEE*
JGI26063J44948_1092176	JGI26063J44948_10921761	F032810	MTDDKRKKIELCFDSVEKLVTLKAALSRAVANISINLETAIERLEDRQFILEGDPFADGDLNDGLMRLDSNDIEYVQRLYTDSLWETMQILLPHYRTTKE*
JGI26063J44948_1095798	JGI26063J44948_10957981	F087316	RLIILLLIVGCXXIAKKEVNNSYLEFWEIKYFVNQNYEPTDVGYITNANPIFGEFSTSKIHNNALKVKIMIKERDVGIKLYENEQKLLVKGNKQDPIEYDIKVKRNDENIDFIFRGINETDLVVVGNIISSSHQDTLIHYLKMGGKFDFYLETKNQSNNKIYEFEINDESPHG
JGI26063J44948_1096343	JGI26063J44948_10963431	F007241	PNITGTVTIKNISLAMPISEISWVMLESANSPTDVKTINGIVITHNKLIIAVSDTERATSPFAKEVNKLDVTPPGAAAIIITPIANSGAIGHIFTRINAIIGSKIIXEKAPTKKSRGCFTTLKKSLPVSPNPNTNIMKAKAKGKKTSITIPIIIITLDYLISVKSSSFNMKML
JGI26063J44948_1097590	JGI26063J44948_10975902	F012125	MLDMRYNVMKPDGGKKSFFSAGKPKNLPAFYFLVVAGIILMVFLFKWFV*
JGI26063J44948_1098962	JGI26063J44948_10989621	F086145	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVRLKIPIIVRV*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002965: Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences