Sample 3300002293

3300002293: Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300002293 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0095506 \| Gp0054941 \| Ga0004540
Sample Name	Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	47871355
Sequencing Scaffolds	40
Novel Protein Genes	49
Associated Families	35

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re1	1
Not Available	17
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	2
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.BinA052	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	3
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin028	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Biogas Fermentation Microbial Communities From Biogas Plants In Germany
Type	Engineered
Taxonomy	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion → Biogas Fermentation Microbial Communities From Biogas Plants In Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline)

Location Information
Location	Bielefeld, North Rhine-Westphalia, Germany
Coordinates	Lat. (^o)	52.0385	Long. (^o)	8.4956	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F014002	Metagenome / Metatranscriptome	266	Y
F014634	Metagenome / Metatranscriptome	261	Y
F017851	Metagenome / Metatranscriptome	238	Y
F020859	Metagenome / Metatranscriptome	221	Y
F020881	Metagenome / Metatranscriptome	221	N
F022612	Metagenome / Metatranscriptome	213	Y
F022893	Metagenome / Metatranscriptome	212	N
F023320	Metagenome / Metatranscriptome	210	N
F029085	Metagenome / Metatranscriptome	189	N
F031881	Metagenome / Metatranscriptome	181	Y
F033394	Metagenome / Metatranscriptome	177	N
F047639	Metagenome / Metatranscriptome	149	Y
F048731	Metagenome / Metatranscriptome	147	Y
F057301	Metagenome / Metatranscriptome	136	N
F065565	Metagenome / Metatranscriptome	127	N
F066555	Metagenome / Metatranscriptome	126	Y
F067651	Metagenome / Metatranscriptome	125	Y
F070019	Metagenome / Metatranscriptome	123	N
F074777	Metagenome / Metatranscriptome	119	Y
F075995	Metagenome / Metatranscriptome	118	Y
F077200	Metagenome / Metatranscriptome	117	N
F079954	Metagenome / Metatranscriptome	115	N
F081238	Metagenome / Metatranscriptome	114	Y
F084123	Metagenome / Metatranscriptome	112	Y
F085052	Metagenome / Metatranscriptome	111	N
F086520	Metagenome / Metatranscriptome	110	N
F087071	Metagenome / Metatranscriptome	110	Y
F088950	Metagenome / Metatranscriptome	109	N
F091649	Metagenome / Metatranscriptome	107	N
F091897	Metagenome / Metatranscriptome	107	Y
F093744	Metagenome / Metatranscriptome	106	Y
F098441	Metagenome / Metatranscriptome	103	N
F099151	Metagenome / Metatranscriptome	103	N
F101220	Metagenome / Metatranscriptome	102	N
F103498	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI24504J29685_1000747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re1	542	Open in IMG/M
JGI24504J29685_1001217	Not Available	1379	Open in IMG/M
JGI24504J29685_1001597	All Organisms → cellular organisms → Archaea	2710	Open in IMG/M
JGI24504J29685_1002588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3949	Open in IMG/M
JGI24504J29685_1002942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1980	Open in IMG/M
JGI24504J29685_1003477	Not Available	1479	Open in IMG/M
JGI24504J29685_1004257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	3698	Open in IMG/M
JGI24504J29685_1005161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	924	Open in IMG/M
JGI24504J29685_1005429	Not Available	862	Open in IMG/M
JGI24504J29685_1007024	Not Available	550	Open in IMG/M
JGI24504J29685_1007104	All Organisms → cellular organisms → Bacteria	3917	Open in IMG/M
JGI24504J29685_1008737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.BinA052	4310	Open in IMG/M
JGI24504J29685_1008883	Not Available	505	Open in IMG/M
JGI24504J29685_1009021	Not Available	663	Open in IMG/M
JGI24504J29685_1009844	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	831	Open in IMG/M
JGI24504J29685_1009923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	617	Open in IMG/M
JGI24504J29685_1011005	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin028	1416	Open in IMG/M
JGI24504J29685_1012286	Not Available	547	Open in IMG/M
JGI24504J29685_1013305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	644	Open in IMG/M
JGI24504J29685_1013591	Not Available	522	Open in IMG/M
JGI24504J29685_1014702	Not Available	626	Open in IMG/M
JGI24504J29685_1014880	Not Available	907	Open in IMG/M
JGI24504J29685_1015253	Not Available	1183	Open in IMG/M
JGI24504J29685_1015434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	682	Open in IMG/M
JGI24504J29685_1015908	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin028	1164	Open in IMG/M
JGI24504J29685_1016295	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	555	Open in IMG/M
JGI24504J29685_1016832	Not Available	566	Open in IMG/M
JGI24504J29685_1016833	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
JGI24504J29685_1017861	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1343	Open in IMG/M
JGI24504J29685_1018678	Not Available	763	Open in IMG/M
JGI24504J29685_1018908	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	857	Open in IMG/M
JGI24504J29685_1020074	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	630	Open in IMG/M
JGI24504J29685_1020659	Not Available	1893	Open in IMG/M
JGI24504J29685_1025011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	752	Open in IMG/M
JGI24504J29685_1025540	Not Available	520	Open in IMG/M
JGI24504J29685_1025787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	551	Open in IMG/M
JGI24504J29685_1026847	Not Available	618	Open in IMG/M
JGI24504J29685_1027200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	747	Open in IMG/M
JGI24504J29685_1032025	Not Available	718	Open in IMG/M
JGI24504J29685_1045775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1020	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI24504J29685_1000747	JGI24504J29685_10007471	F093744	GGYNMGFKIGDRVEVNYPIDDFQGHIGIVKKITTDTELIPKKTAVICYWAFLDKEIAFYESSLNLI*
JGI24504J29685_1001217	JGI24504J29685_10012171	F033394	NEIADIYYKDNSKNLHCTINLYTTNKEIREQFRKNLLERYWDKIEITDINDLKMIVKDSFVQIFTLQREKIDKND*
JGI24504J29685_1001597	JGI24504J29685_10015973	F103498	MGSTESCESQHCRLRTDILCEVQRREEKQDERFHALINELRLDWKETKKEVISIKDTMIQGFIALIVAIVGVYVSYLLLNVNGFF*
JGI24504J29685_1001597	JGI24504J29685_10015976	F088950	MDIDGVLKEIAEFIEEKIPELDTKVTTIYPESKRFAPPTVVIDIVAGRETLIIDGSKTHELVRVAIISDKKSEINRIFNLITDAFLNHGRELKTGIYKGISYISPVAPAFVEKDSALKRELDIVVIEFKKRG*
JGI24504J29685_1002104	JGI24504J29685_10021042	F031881	MKEFNFKVDRKLSTMQIGKNKYKFAIDKSGATDINITQDKIEDVIYSIFDSSEFLDLVRIITNIKGTQKIPKIYLQGLNGVGNGLVDSTGCGFVDTTEMVLSDVDISVTKKRMGLELCLDELVNMVLEVHISDGARNENLDINEALLAYFAQVLRKNIQEYAFADASDGLLTKILTDGTAPTISVTDPLEILLALYENLPSGWQTSNEANPVIFINSAMMTAIRGQIFSSTAPITSSIEIVNNRFNLPLTNAVVVASPHMPISGTKMRAVAGISNYLFLATDLESDFDDVRVWYSNDNETIRFSSQVYLGTAIADVGSFVKYIES*
JGI24504J29685_1002105	JGI24504J29685_10021051	F031881	MKEFNFKVDRKLSTMQIGKNKYKFAIDKSGATDINITQDKIEDVIYSIFDSSEFLDLVRIITNIKGTQKIPKIYLQGLNGVGNGLVDSTGCGFVDTTEMVLSDVDISVTKKRMGLELCLDELVNMVLEVHISDGARNENLDINEALLAYFAQVLRKNIQEYAFADASDGLLTKILTDGTAPTISVTDPLEILLALYENLPSGWQTSNEANPVIFINSAMMTAIRGQIFSSTAPITSSIEIVNNRFNLPLTNAVVVASPHMPISGTKMRAVAGISNYLFLATDLESDFDDVRVWYSNDNETIRFSSQVYLGTAIADVESFVKYIE
JGI24504J29685_1002588	JGI24504J29685_10025887	F067651	MENQNKPYATPSQEDFLLSGYKGLVAAMLISMVKDLAIPDSEIEVHPHDGREVKRRKEEKEYYKHSAYTFVRSEWFESLCWYIDVEPDVIRRYAIERYNES
JGI24504J29685_1002942	JGI24504J29685_10029424	F048731	MVRTMEKALRYALTISEDPIQIKKNVEEYLAAAGFDRRYKFKWRALSGNAKYTSSGIFEFAGQRYYFSKMSGELELERI*
JGI24504J29685_1002942	JGI24504J29685_10029426	F014634	MKEKIEEIFDLERIREYAETNIDLTEWIEEEYGETRKILLIATLVEGAYGAYIPGMVLELFGRAEGYDLEDPYNYEKNETIHDALISLEIEVNECLNELMPAKGTYYMSYHEADGSYCLFYEEVEQ
JGI24504J29685_1003477	JGI24504J29685_10034771	F077200	CKMNKFTVIAVETQPNLKRIEEYANRYGMTLEEALQRKRIGEDYFPIRDQQVVSAGVLNFINKEDKISIIAAVFAGEEKKVLDALAERLEKIVKATGKPFFVTGDGRKYALEILAGRAMAYMIEAKKENQEIKPELQNMIKIITSPKNGYLKPFDMRDSIDIQAAFGLGHDIIPLPEKLQYTNEDLPELAEDTKRLLLDMTKNYACYIEAQGEKIKPIVYKLDEKIFKTTEIFKFEDHDEADIEKTLDKEELEIER*
JGI24504J29685_1004257	JGI24504J29685_10042573	F084123	LSSANSERFWLIWQFVEMALDLEAAKEDIRHEYHAWFAELAISSQLYEDDETFSKAARIVDLEARVLAKVTDEHRPLAVQVFRLVQQWLEQLDATTRRYIFEGGPSRRQFVDRVVQYIICQINT*
JGI24504J29685_1005161	JGI24504J29685_10051613	F022612	MRDLTIGKYRRIRKDVARRLFNNGRIIYLVPSKVIPNDSGPWIRPYPINNRAGQDFDDLVNRYEFYNCCYELGYYTSFWVNREEK*
JGI24504J29685_1005429	JGI24504J29685_10054291	F074777	MEEYKEVEEKAKAIIDGFRDVSAKWPYGYATYKEVMEDNAIPYTSHTCHLLKKWAEYANPYDTGDIAEFLTVTTGEKWEVKAFTGYSQGDYCEVVYCVSRYTPERINEIGELWLGCGTEFCIDGCYGYFVPESIRWREGETLRKYLADSYGCEPEELEIYLYDGEHIVTDYRKMD*
JGI24504J29685_1007024	JGI24504J29685_10070241	F029085	KIDELLEENISEQLESGSSDLVSLIAISELTNLEKLKVITRLKDEQVPLLAKLYMYAETFNVPFMKNLADNILQLQISIRGLGRKELVNIVRESTPTETKRSLFGPKDVFR*
JGI24504J29685_1007024	JGI24504J29685_10070242	F075995	MSKYRPLRKANVYITKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRLK*
JGI24504J29685_1007104	JGI24504J29685_10071044	F065565	MSFLKVLNILVTAAGFIIPLALLLEAEELPGEEKKKAVLAQLKAQLDSLGLEFPQWLQKFIDPILGLLIDAVVFWLNKIGFFEHGGESSED*
JGI24504J29685_1008737	JGI24504J29685_10087372	F057301	MRDSIPGMPTLFGAPKDNDDEFSVDLSEAPVGGGYLIPDGDYPAVLVDLRKGFSKNGNPQWVWTFAIMGGEHAGKEFPLYTAIIPSALWKVAETVEALGLGKGGTMSKFTKSGALSRRCIISIRKDTYNGQERSSITKVLPHPDGPGPVTGFNPKKVSDSPVSF*
JGI24504J29685_1008883	JGI24504J29685_10088831	F029085	ECFNMKDIKNDKLKIDELLEENISEQLENGSSDLVSLIAISELTNLEKLKVITRLKDEQVPLLAKLYMYAETFNVPFIKNLADNILQLQISIRGLGRKELVNIVRESTPTEVKRSLFGTKDVFR*
JGI24504J29685_1009021	JGI24504J29685_10090211	F070019	DIFRAQYILPRRNYLLDCLKNIGINVEIEEILPNFLKQATTNYMFSSEKDFVEDDKVDFILDLFSKAGKKLDDSVKIIYEHGLEEDGSGGIEDYEVVKYMQFAQNLSYNDYVILNTLNEKGNLLALCDELSISKDRLDKSLEILKENGYIKGFDVTKAGKNLLQNTNIQVVRTYYRYTVKPGLGDPIIPSSRKFCIQMITENRIYTKKEIDMISARAGLD
JGI24504J29685_1009844	JGI24504J29685_10098441	F081238	VAAKPFYADYVNRLMRWYCRATREGKEVNLKSALDRENWDAVAKVMERLNEENKCAIIRVYCKRGTMVENVRLTALELGWEQDKLWTLVSKVTRKVAEERRLV*
JGI24504J29685_1009923	JGI24504J29685_10099232	F066555	MKGKLRREFVERVKTDFGGDFIAGEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDTIRNAVEELVDDLW*
JGI24504J29685_1011005	JGI24504J29685_10110052	F022893	MKLKKSKKLTISYKVKVKHFEDFLRLCSYDKTDVDGFINLLSKCTEVDKEIFYNLRFADLIRFVDELVDSVDKEMYKAPKKAIKVGERYYKLIDLLNLQVAFYVDFDLVEKTPSYLLALCYTETGTYTDERNSSVDEREKIMQNADVIDYMRLANFFLTWRDFLKKLKEIQKN*
JGI24504J29685_1011005	JGI24504J29685_10110054	F023320	MKQYKALTFEVDLSGLGKEQWIQEELDYDTIAQKIIDTLIDVMREKDVEASSNLIQSLEPETKSGEIVIYADYYWKFIDKGVNGLLQNRNSEFSFKFVPASKKXAXSIAKWXEXRGLATEFTTLADAYRVATATKIKGIR
JGI24504J29685_1012286	JGI24504J29685_10122862	F014002	MDFNFNISELISIIALLIAIISGYVNIKIQITKLVEANKNLSEKITNLDKKVSEICKKVDRIKIILAKEGINNDNE*
JGI24504J29685_1013305	JGI24504J29685_10133051	F047639	FNSDKSSTITYHLSSKFKPDFLINPDHIFIYNGYRTVIITDKSAETINPLDFNSKFNASDFKTAIESKLIKDTFSTLKPNLFDTTTIILILNLVMSFGILYLLLKGQGVL*
JGI24504J29685_1013305	JGI24504J29685_10133052	F029085	MKDIKNDKLKIDELLEENISEQLESGSSDLVSLIAISELTNLEKLKVITRLKDEQVPLLTRLYMYAETFNVPFMKNLADNILQLQISIRGLGRKELVNIVRES
JGI24504J29685_1013591	JGI24504J29685_10135911	F101220	MKTKKLKKFIKKNYSKVFVLNAYEFYADPPSYFLERLYTQDYDYILDVFLEECRENNVSILDAINYYIKNKKEKYECR*
JGI24504J29685_1014702	JGI24504J29685_10147021	F074777	VKYANPYDTGDIAEFLTITTGEEWAVKAFTGYSQGDYCEVVYCINHHTPERINEIGKLWLGCGTEFCIDGCHGYYVIDEIRWEEGEKLRQYLADSYGCEPDELEIYLYDGEHIVTDYRKMD*
JGI24504J29685_1014880	JGI24504J29685_10148802	F086520	MTKSRKDVVNKAFEQAAFEVEMRKREKERIRRKRYTPMTKAQFKYWVMRDLGLLEEYYDDFE*
JGI24504J29685_1015253	JGI24504J29685_10152531	F020881	EELFTVADIKDVSIMQKNINDDVIATLLQNVKEIEFLPLFKNNFFEDFLQRWTNETQTTQDIQLKHYMLLYITKCIEYRAVTTLTYQIRASGIVSMNAENAVRVSDTERKTLLDQLNSDKEFHKHMMIKFINNYYQGFATTSKAFKNFDIL*
JGI24504J29685_1015253	JGI24504J29685_10152532	F098441	MNFKDFLTTFDTYLEYENLFSSHYYGYVNNVFVEKKLLYPILIYHTDAMNHSILDNSITVLKFNFFVFDKLKTDNSNIIDVQDDLLKKLVKIQSYLKRKFFATNFNITAISDEAYSEKITGWVMDCLIKLDTSEATCIDMRERYLIDRISKYDRQTYTIIECLLPSGSEAVFPNYTYFLDDYRNPVDYINNTVFRNMKFYGNFYMNNLKKINDYEFENSVFQGFFRAQNVESVGQYAFRNSEF
JGI24504J29685_1015434	JGI24504J29685_10154342	F047639	MRFLNKHKYLRVIKFNSDKSSTITYHLSSKFKPNFLINPDHIFIYNGYRTVVITDKSAETINPLDFESKFNASDFQTAIESKLIKDTFSTLKHNIFDTPTILLIINLVITLGVLYFLLKSQGVI*
JGI24504J29685_1015908	JGI24504J29685_10159081	F023320	MKQYKALTFEVDLSGLGKEQWIQAELDYDTIAQKIIDTLIDVMREKDVEASSNLIQSLEPETKSGEIVIYADYYWKFVDKGVNGLLQNRNSPYSFKFVPASKKHALSIAKWLEFRGLATEFTTLADAYRVATATKIKGIRGRKFVEEFEKELDNIEII*
JGI24504J29685_1016295	JGI24504J29685_10162951	F081238	VNRLMRWYCRAQEAGKEVNLERALDRENWNAVAKVMERLDEEGKCAIMGVYCKRDTMADNVYLTAFEMGWDQDRLWALVSRVTRKVAEERGLV*
JGI24504J29685_1016832	JGI24504J29685_10168321	F085052	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAEAMMKSVEQIFTNTETAMSALTSAVETAKLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24504J29685_1016833	JGI24504J29685_10168333	F085052	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAEAMMKSVEQIFTNTETAMSALTSAVETAKLAMLSAKESMDSAKTAWDGLLTEEG
JGI24504J29685_1017861	JGI24504J29685_10178611	F017851	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWERTTQKICKILKDEVERMPRETKRALAVAAHLLPADEPILLFQVESWLSMMDDGGSWWEVPAYLSLAAISLPAVVKASEQAKKRILKVVTAI*
JGI24504J29685_1018678	JGI24504J29685_10186781	F020859	MKKIIAKEVNPAYVDFSLYFYDDSLKSVSGENCAVYIVPGDRRRYGGFNMGEYEEIEEKAKAIIDGFRDVSAKWPYGYATYKEVMEDNAISYTSHKCKLLKEWVKYAKPYDTGDIAEFLTITTGEEWAVKAFTGYSQGDYCEVVYCVNHYTPERITEIGELWLGCGTEFCIEGCYGYFVPESIRWREGEILRKYLADSYGCEPDELEIYLYEGEHIVTDYRKMD*
JGI24504J29685_1018908	JGI24504J29685_10189081	F079954	ERWTKQKILQTCLYLIPKKNSETLNALLAVIEREGRYFSKPTFYKKIRPGSKEYQQIVEAIEDNNLYLGEYGLGKLKKLVDDYNLKAIELWLRIYGSDKVKQALSRNYNITAKADISFEQEMKKVEEDLSKFSKEELLQYRALRKKLLNNE*
JGI24504J29685_1020074	JGI24504J29685_10200741	F081238	VAAKPFYADYVNRLMRWYCRAMEEGKEVNLESSLDKENWNAVAKVMEKLNEENRCAIMKVYCKRDTIVNSVRLTAVELGWEQDKLWALVSKVTRRVAEERGLV*
JGI24504J29685_1020659	JGI24504J29685_10206594	F091897	MIGSSISFFPNTQYQCCECGRNLGDKYSRLKGKKQPTVIIINDKQYCIKCADKHWDYQIKRM*
JGI24504J29685_1025011	JGI24504J29685_10250111	F014634	DPSFSKKGGKRMKERIKEIFNLERIREYAEANIDLTEWVEKDCGKTRKILLIATLVDGGFGAYIPGMVLELFGRAEGYDLEDPYNWEKNETIYDALISLETEVNKCLEELLPAKGIYYIGYHEADGSYCLFYEEYEEEE*
JGI24504J29685_1025011	JGI24504J29685_10250112	F048731	MIRTMEKALRYALAISEDPPRIKEHVEEYLAAVGFDRRFKFKWKALSGHATRTFSGIFEYAGQRFYFSKMSGELELERI*
JGI24504J29685_1025540	JGI24504J29685_10255401	F091649	MPVYDDPDYEWKQMIKKNGICDPYEKSIREFKEEYERIEKEFIEEYKRIEKKLKQTGG*
JGI24504J29685_1025787	JGI24504J29685_10257872	F048731	MVRTMEKALRYALAISEDPPKIKEHVEEYMAIAGFDRRFKFKWKALSGHATRTFSGIFEFAGQRYYFNRTSDELELEKI*
JGI24504J29685_1026847	JGI24504J29685_10268472	F029085	MKDIKNDKLKLNELLEENINEQLENGSSDLVSLIAISELTNLDKLKVITRLKEEQVPLLTKLYMYAETFNVPFIRNMADNILQLQISIRGLGRKELVNIVRESTPTEVKRSLFGTKE
JGI24504J29685_1027200	JGI24504J29685_10272001	F014634	REYAEANIDLTEWIEEEYGEKRKILLIDTLVSGAYGAYIPGIVLDLFGQAEGYDLEDPYNFEANETIYDALICLENEVNKCLNELMPSKGTYYIGYHEADGSYCLFYEEYEEEN*
JGI24504J29685_1032025	JGI24504J29685_10320252	F099151	MKFREEIFKENGQIVKKYYINDKEVTQDVYYNLTDELYENIKLKQEEYTDELCNCEECQYFLELINKIRQSSDSEALAILKDEIEFRVQEAYIEGQHVLANELGNSLLKHAVKLEDELENLYENGSLDKYSEDS*
JGI24504J29685_1045775	JGI24504J29685_10457751	F087071	MVQYFDKKKARRYGQVVKETKMSAIVYTAHREKEVVPRDKIIREEFVTSDRAYLRSLRK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002293: Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences