Metagenome / Metatranscriptome Family F075995

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075995
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	62 residues
Representative Sequence	MSRYRPLKKANVYITKNFKRVFYGMRTLYVKDCTGRVYIKYKNRYYQAHFDGYHTYHVRL
Number of Associated Samples	48
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.90 %
% of genes near scaffold ends (potentially truncated)	27.12 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.864 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion (34.746 % of family members)
Environment Ontology (ENVO)	Unclassified (89.831 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (45.763 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 46.59% Coil/Unstructured: 53.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.167.1.0: automated matches	d4b0ma_	4b0m	0.61577
b.167.1.1: Usher N-domain	d1ze3d1	1ze3	0.57624
e.32.1.1: Phase 1 flagellin	d1io1a_	1io1	0.57587
d.15.6.1: Superantigen toxins, C-terminal domain	d1ty0a2	1ty0	0.54025
b.168.1.1: HisI-like	d1zpsa1	1zps	0.53884

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF05707	Zot	41.03
PF00004	AAA	7.69
PF02195	ParBc	1.71
PF00436	SSB	1.71

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG4128	Zona occludens toxin, predicted ATPase	General function prediction only [R]	41.03
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.71
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
All Organisms	root	All Organisms	38.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Viruses	superkingdom	All Organisms → Viruses	22.03 %
cellular organisms	root	All Organisms → cellular organisms	16.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	16.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	16.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	16.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	15.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	15.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.03 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	15.25 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111018\|Meso_c917776	Not Available	551	Open in IMG/M
3300000510\|Foulum_1003294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2056	Open in IMG/M
3300002163\|JGI24707J26582_10079429	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300002163\|JGI24707J26582_10131762	Not Available	708	Open in IMG/M
3300002167\|JGI24714J26587_10030916	All Organisms → Viruses → Predicted Viral	1727	Open in IMG/M
3300002167\|JGI24714J26587_10089742	Not Available	652	Open in IMG/M
3300002173\|JGI24709J26583_10035316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2223	Open in IMG/M
3300002173\|JGI24709J26583_10041203	All Organisms → Viruses → Predicted Viral	1968	Open in IMG/M
3300002173\|JGI24709J26583_10074681	Not Available	1201	Open in IMG/M
3300002173\|JGI24709J26583_10104290	Not Available	906	Open in IMG/M
3300002174\|JGI24710J26742_10058903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1606	Open in IMG/M
3300002174\|JGI24710J26742_10058903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1606	Open in IMG/M
3300002174\|JGI24710J26742_10164298	Not Available	670	Open in IMG/M
3300002293\|JGI24504J29685_1007024	Not Available	550	Open in IMG/M
3300002376\|JGI24505J29691_1012944	Not Available	759	Open in IMG/M
3300002376\|JGI24505J29691_1048985	All Organisms → Viruses → Predicted Viral	1004	Open in IMG/M
3300002377\|JGI24500J29687_10042489	All Organisms → Viruses → Predicted Viral	1602	Open in IMG/M
3300002377\|JGI24500J29687_10043249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2877	Open in IMG/M
3300002377\|JGI24500J29687_10085286	Not Available	903	Open in IMG/M
3300002377\|JGI24500J29687_10109568	All Organisms → Viruses → Predicted Viral	1681	Open in IMG/M
3300002377\|JGI24500J29687_10138617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	814	Open in IMG/M
3300002378\|JGI24502J29692_10011322	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300002378\|JGI24502J29692_10013852	Not Available	646	Open in IMG/M
3300002378\|JGI24502J29692_10018288	Not Available	834	Open in IMG/M
3300002378\|JGI24502J29692_10028022	All Organisms → Viruses → Predicted Viral	1320	Open in IMG/M
3300002378\|JGI24502J29692_10029694	Not Available	633	Open in IMG/M
3300002378\|JGI24502J29692_10045598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	3008	Open in IMG/M
3300002378\|JGI24502J29692_10057094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1413	Open in IMG/M
3300002378\|JGI24502J29692_10101981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1070	Open in IMG/M
3300002378\|JGI24502J29692_10117404	Not Available	710	Open in IMG/M
3300002378\|JGI24502J29692_10158366	Not Available	627	Open in IMG/M
3300002378\|JGI24502J29692_10164351	Not Available	767	Open in IMG/M
3300002391\|JGI24501J29690_1027643	Not Available	740	Open in IMG/M
3300002391\|JGI24501J29690_1027901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1103	Open in IMG/M
3300002391\|JGI24501J29690_1078885	Not Available	713	Open in IMG/M
3300002392\|JGI24503J29689_10014253	Not Available	845	Open in IMG/M
3300002392\|JGI24503J29689_10096269	Not Available	780	Open in IMG/M
3300002837\|bg3kmer60_1024919	All Organisms → Viruses → Predicted Viral	1668	Open in IMG/M
3300002898\|draft_10129658	All Organisms → Viruses → Predicted Viral	1656	Open in IMG/M
3300002898\|draft_10312868	Not Available	791	Open in IMG/M
3300002898\|draft_10367048	Not Available	692	Open in IMG/M
3300002898\|draft_10436229	Not Available	600	Open in IMG/M
3300002898\|draft_10471272	Not Available	563	Open in IMG/M
3300002898\|draft_10502821	Not Available	534	Open in IMG/M
3300002898\|draft_10529325	Not Available	512	Open in IMG/M
3300003306\|Ga0004534J46558_1017805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2304	Open in IMG/M
3300006674\|Ga0101770_1040158	All Organisms → Viruses → Predicted Viral	1400	Open in IMG/M
3300006674\|Ga0101770_1072429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	5161	Open in IMG/M
3300006674\|Ga0101770_1130831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1645	Open in IMG/M
3300006674\|Ga0101770_1135008	All Organisms → Viruses → Predicted Viral	3155	Open in IMG/M
3300006801\|Ga0079223_10207555	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300006801\|Ga0079223_10313298	Not Available	971	Open in IMG/M
3300006801\|Ga0079223_10591470	Not Available	698	Open in IMG/M
3300006840\|Ga0101790_105232	All Organisms → Viruses → Predicted Viral	4430	Open in IMG/M
3300006840\|Ga0101790_120399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1333	Open in IMG/M
3300009095\|Ga0079224_101483102	Not Available	963	Open in IMG/M
3300009095\|Ga0079224_102577900	Not Available	725	Open in IMG/M
3300009095\|Ga0079224_105079785	Not Available	509	Open in IMG/M
3300009588\|Ga0116232_1006050	Not Available	976	Open in IMG/M
3300009648\|Ga0116175_1014511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	3428	Open in IMG/M
3300009653\|Ga0116169_1288270	Not Available	537	Open in IMG/M
3300009653\|Ga0116169_1307601	Not Available	517	Open in IMG/M
3300009654\|Ga0116167_1049839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1733	Open in IMG/M
3300009657\|Ga0116179_1036868	All Organisms → Viruses → Predicted Viral	2191	Open in IMG/M
3300009657\|Ga0116179_1064125	Not Available	1472	Open in IMG/M
3300009657\|Ga0116179_1149376	Not Available	820	Open in IMG/M
3300009657\|Ga0116179_1259130	Not Available	572	Open in IMG/M
3300009663\|Ga0116181_1113689	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300009663\|Ga0116181_1175308	Not Available	812	Open in IMG/M
3300009663\|Ga0116181_1231396	Not Available	680	Open in IMG/M
3300009663\|Ga0116181_1288040	Not Available	594	Open in IMG/M
3300009668\|Ga0116180_1055226	All Organisms → Viruses → Predicted Viral	1880	Open in IMG/M
3300009668\|Ga0116180_1091978	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300009668\|Ga0116180_1199849	Not Available	780	Open in IMG/M
3300009668\|Ga0116180_1228960	Not Available	713	Open in IMG/M
3300009668\|Ga0116180_1273545	Not Available	636	Open in IMG/M
3300009712\|Ga0116165_1202959	Not Available	668	Open in IMG/M
3300009712\|Ga0116165_1266301	Not Available	558	Open in IMG/M
3300009852\|Ga0131851_1067293	Not Available	689	Open in IMG/M
3300009854\|Ga0131850_1086010	Not Available	619	Open in IMG/M
3300009947\|Ga0131849_115951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	879	Open in IMG/M
3300009947\|Ga0131849_141621	Not Available	512	Open in IMG/M
3300009950\|Ga0131848_1012344	Not Available	1536	Open in IMG/M
3300009950\|Ga0131848_1083445	Not Available	594	Open in IMG/M
3300010340\|Ga0116250_10180113	Not Available	1311	Open in IMG/M
3300010340\|Ga0116250_10411292	Not Available	781	Open in IMG/M
3300010340\|Ga0116250_10486697	Not Available	701	Open in IMG/M
3300014203\|Ga0172378_10925164	Not Available	626	Open in IMG/M
3300014206\|Ga0172377_10600875	Not Available	884	Open in IMG/M
3300015214\|Ga0172382_10488540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	905	Open in IMG/M
3300015214\|Ga0172382_10570756	Not Available	813	Open in IMG/M
3300015214\|Ga0172382_10640777	Not Available	751	Open in IMG/M
3300019218\|Ga0179954_1035921	Not Available	510	Open in IMG/M
3300025471\|Ga0209508_1021011	All Organisms → Viruses → Predicted Viral	1898	Open in IMG/M
3300025587\|Ga0208938_1045764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1133	Open in IMG/M
3300025605\|Ga0209720_1116017	Not Available	688	Open in IMG/M
3300025609\|Ga0209608_1095425	Not Available	772	Open in IMG/M
3300025618\|Ga0208693_1050187	Not Available	1439	Open in IMG/M
3300025618\|Ga0208693_1061404	All Organisms → Viruses → Predicted Viral	1228	Open in IMG/M
3300025618\|Ga0208693_1100443	Not Available	822	Open in IMG/M
3300025657\|Ga0208823_1109643	Not Available	833	Open in IMG/M
3300025657\|Ga0208823_1116102	Not Available	796	Open in IMG/M
3300025683\|Ga0208564_1044163	All Organisms → Viruses → Predicted Viral	1752	Open in IMG/M
3300025683\|Ga0208564_1087702	Not Available	1044	Open in IMG/M
3300027510\|Ga0209537_1052126	All Organisms → Viruses → Predicted Viral	1255	Open in IMG/M
3300027510\|Ga0209537_1056206	All Organisms → Viruses → Predicted Viral	1164	Open in IMG/M
3300027510\|Ga0209537_1068262	Not Available	967	Open in IMG/M
3300027510\|Ga0209537_1086602	Not Available	775	Open in IMG/M
3300027510\|Ga0209537_1089892	Not Available	748	Open in IMG/M
3300027711\|Ga0209075_1045563	All Organisms → Viruses → Predicted Viral	2292	Open in IMG/M
3300027711\|Ga0209075_1146136	Not Available	1007	Open in IMG/M
3300027711\|Ga0209075_1224294	Not Available	754	Open in IMG/M
3300027711\|Ga0209075_1235308	Not Available	730	Open in IMG/M
3300028602\|Ga0265294_10437577	Not Available	815	Open in IMG/M
3300028603\|Ga0265293_10237942	All Organisms → Viruses → Predicted Viral	1218	Open in IMG/M
3300029822\|Ga0134854_1008972	All Organisms → Viruses → Predicted Viral	4325	Open in IMG/M
3300029822\|Ga0134854_1032227	Not Available	1397	Open in IMG/M
3300029822\|Ga0134854_1063564	Not Available	744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	89.83%
Environmental	Environmental	10.17%

Habitat	Taxonomy	Distribution
Biotransformation	Engineered → Biotransformation	35.59%
Wastewater	Engineered → Wastewater	28.81%
Solid Waste	Engineered → Solid Waste	10.17%
Bioreactor	Engineered → Bioreactor	9.32%
Terrestrial	Environmental → Terrestrial	8.47%
Unclassified	Engineered → Unclassified	5.93%
Aquatic	Environmental → Aquatic	1.69%

Habitat	Taxonomy	Distribution
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	34.75%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	28.81%
Soil	Environmental → Terrestrial → Soil	8.47%
Unclassified	Engineered → Unclassified → Unclassified	5.93%
Zoo Waste	Engineered → Solid Waste → Zoo Waste	5.08%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	5.08%
Landfill	Engineered → Solid Waste → Landfill	4.24%
Unclassified	Engineered → Bioreactor → Unclassified	2.54%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.69%
Grass	Engineered → Solid Waste → Grass	0.85%
Unclassified	Engineered → Biotransformation → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	34.75%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	28.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.47%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	5.93%
Composting	Engineered → Solid Waste → Zoo Waste → Composting	5.08%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	5.08%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	4.24%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	2.54%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.69%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.85%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	34.75%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	28.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.47%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	5.93%
Unclassified	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified	5.08%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	5.08%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	4.24%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.69%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.69%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.85%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	34.75%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	28.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	8.47%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	5.93%
Compost	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified → Compost	5.08%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	4.24%
Food Waste	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Food Waste	3.39%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	2.54%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.69%
Anaerobic Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Anaerobic Reactor	1.69%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	0.85%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	0.85%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	0.85%
Biogas Reactor	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002293	Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002376	Biogas fermentation microbial communities from Germany - Plant 4 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002377	Biogas fermentation microbial communities from Germany - Plant 2 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002391	Biogas fermentation microbial communities from Germany - Plant 2 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002837	Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006674	Anaerobic microbial community collected from a biogas reactor in Fredrikstad, Norway. Combined Assembly of Gp0117115, Gp0124038	Engineered	Open in IMG/M
3300006801	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011	Environmental	Open in IMG/M
3300006840	Anaerobic bioreactor microbial communities from Canach, Luxembourg	Engineered	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009588	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009648	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG	Engineered	Open in IMG/M
3300009653	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG	Engineered	Open in IMG/M
3300009654	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009712	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG	Engineered	Open in IMG/M
3300009852	Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 99 mira	Engineered	Open in IMG/M
3300009854	Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 78 mira	Engineered	Open in IMG/M
3300009947	Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 67 mira	Engineered	Open in IMG/M
3300009950	Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 64 mira	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019218	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025471	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025587	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025605	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025609	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300027711	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011 (SPAdes)	Environmental	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_9177761	2209111018	Solid Waste From Bioreactor	MKNKLFGVYKPLGKANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR
Foulum_10032942	3300000510	Anaerobic Digester	MSRYIPIRKANVHISKNFKKVFYGMRTLYKRPFREGFHVRYKNRYYRAYFDGRYTYHVRL
JGI24707J26582_100794293	3300002163	Biogas Fermentantion	MRSRYIPIKKANVYISNNFKKVFYGFRTLYAKDATGKVYIRYKNKYYRAYSDGYYPTTYYVRLEKKK*
JGI24707J26582_101317621	3300002163	Biogas Fermentantion	MRSRYMPLRKANVYIMTNDFKKLFYGMRTLYAKDCTGKKYIRYKNRYYPVFYDGYHTYIARIKR*
JGI24714J26587_100309164	3300002167	Biogas Fermentantion	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRLX*
JGI24714J26587_100897422	3300002167	Biogas Fermentantion	MRKYRPLRKANVYITKNFKRVFYGRRTLYVKDCTGRVYIKYNNKYYQAHYDGYNTYNVRIR*
JGI24709J26583_100353163	3300002173	Biogas Fermentantion	LRRYRPLRKANVYIVTYDFKKVFYGMRTLYSKGLSIQKYVRYKNRYYPAYYDGYHTYNVMLKK*
JGI24709J26583_100412032	3300002173	Biogas Fermentantion	MKNKLFGVYKPLGKANVFITKNFKRVFYGPRTLYSKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
JGI24709J26583_100746814	3300002173	Biogas Fermentantion	MKNKLFGVYKPIGKANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYEVRIR*
JGI24709J26583_101042903	3300002173	Biogas Fermentantion	NFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYEVRIR*
JGI24710J26742_100589032	3300002174	Biogas Fermentantion	LRRYRPLRKANVYIVTYDFKKVFYGMRTLYSKGLSIQKYVRYKNRYYPAYYDGYHTYNVMLKKYNARVLFSNWSPR
JGI24710J26742_100589033	3300002174	Biogas Fermentantion	MSKYKPYKKANVYILKNDKRVFYGIRTIYSKDSTGKIFIRYKNRYYRVYHSGRNIYLSFI
JGI24710J26742_101642981	3300002174	Biogas Fermentantion	LRRYRPLRKANVYIVTYDFKKVFYGMRTLYIKGLSIQKYIRYKNRYYPAYFDGYHTYNVMLKR*
JGI24504J29685_10070242	3300002293	Biogas Fermentantion	MSKYRPLRKANVYITKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRLK*
JGI24505J29691_10129442	3300002376	Biogas Fermentantion	MSKYRPLKKANVYITKNFKRVFYGRRTLYVKDCTGRVYIKYNNKYYQAHYDGYNTYHVRLR*
JGI24505J29691_10489853	3300002376	Biogas Fermentantion	MRSRYIPIKKANVYISNNFKKVFYGFRTLYAKDATGKVYIRYKNKYYRAYSDGYYPTTYYVRLEKKNRL*
JGI24500J29687_100424894	3300002377	Biogas Fermentantion	LRRYRPLRKANVYIVTYDFKKVFYGMRTLYSKGLSIQKYVRYKNRYYPAYYNGYHTYNVMLKK*
JGI24500J29687_100432497	3300002377	Biogas Fermentantion	MKNKLFGVYKPIGKANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQA
JGI24500J29687_100852861	3300002377	Biogas Fermentantion	MSKYKPYKKANVYILKNNKRVFYGMRTIYSKDGTGKIFIRYKNRYYRVYHSGRNIYLSFI
JGI24500J29687_101095684	3300002377	Biogas Fermentantion	VRSRYMPLRKANVYIMTNDFKKLFYGMRTLYAKDCTGKKYIRYKNRYYPVFYDGYHTYIARIKR*
JGI24500J29687_101386171	3300002377	Biogas Fermentantion	MKNKLFGVYKPLGKANVFITKNFKRVFYGFRTLYAKDLSGRVYVRYKNKYYQAHYDGRHTYNVRIR*
JGI24502J29692_100113222	3300002378	Biogas Fermentantion	MRSRYMPIKKANVFITTRKDFKRVFYGIRTLYAKDCTGRVYIRYKNKYYPAYSDGYYPSTYYVRL*
JGI24502J29692_100138522	3300002378	Biogas Fermentantion	LRRYRPLRKANVYIVTYDFKKVFYGMRTLYSKGLSIQKYIRYKNRYYPAYFDGYHTYNVMLKR*
JGI24502J29692_100182882	3300002378	Biogas Fermentantion	VINKFNKKKGVLIMRSRYMPLRKANVFITTRKDFKRVFYGMRTLYAKDCTGRKYIRYKNRYYPVFYDGYHTYIARI*
JGI24502J29692_100280223	3300002378	Biogas Fermentantion	MRSRYMPIKKANVYISNRQNFKKVFYGMRTLYAKDCTGKVYIRYKNKYYPAYSDGYYPSTYYVRL*
JGI24502J29692_100296941	3300002378	Biogas Fermentantion	LKRYRPLRKANVFIMTNDFKKVFYGMRTLYIKGLSTQTYIRYKNRYYPAYFDGYHTYHVRIKR*
JGI24502J29692_100455987	3300002378	Biogas Fermentantion	MRSRYMPIKKANVFITTRQDFKRVFYGIRTLYAKDCTGRVYIRYKNKYYRAFSDGYYPTTYYVRL*
JGI24502J29692_100570944	3300002378	Biogas Fermentantion	MKNKLFGVYKPIDKANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
JGI24502J29692_101019813	3300002378	Biogas Fermentantion	LRRYRPLRKANVHIITNDFKKVFYGMRTLYIKGLSTQKYVRYKNRYYPAYYDGYHTYNVRIKKR*
JGI24502J29692_101174042	3300002378	Biogas Fermentantion	MKNKLFGVYKPVGKANVFITKNFKRVFYGPRTLYSKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
JGI24502J29692_101583662	3300002378	Biogas Fermentantion	MSYRRFKKANVYISKNFKKVFYGPRTLYVEDTLNRITGRLYVRYKNKYYRAYYDGRHTYNVRL*
JGI24502J29692_101643512	3300002378	Biogas Fermentantion	MSYRRYKKANVSISKNFKKVFYGPRTLYVEDTLNRITGRVYVRYKNKYYQAYFDGRHTYRVRIH*
JGI24501J29690_10276432	3300002391	Biogas Fermentantion	MKNKLFGVYKPLGKANVFITKNFKRVFYGFRTLYAKDLSGRVYVRYKNKYYQAHYDGRHTYNVRIR*YNAWFLSSNRTSG
JGI24501J29690_10279014	3300002391	Biogas Fermentantion	LRRYRPLRKANVYIVTYDFKKVFYGMRTLYSKGLSIQKYVRYKNRYYPAYYDGYHTYNVMLKK*YNARVLFSDWSPRVR
JGI24501J29690_10788851	3300002391	Biogas Fermentantion	RPLRKANVYIVTYDFKKVFYGMRTLYSKGLSIQKYVRYKNRYYPAYYNGYHTYNVMLKK*
JGI24503J29689_100142532	3300002392	Biogas Fermentantion	MRSRYMPLRKANVFITTRKDFKRVFYGMRTLYAKDCTGRKYIRYKNRYYPVFYDGYHTYIARI*
JGI24503J29689_100962693	3300002392	Biogas Fermentantion	LRKYRPLRKANVHIITNDFKKVFYGMRTLYTKGLSTQKYIRYKNRYYPAYFDGYHTYHVRIKR*
bg3kmer60_10249191	3300002837	Biogas Reactor	LRRYRPLRKANVHIITNDFKKVFYGMRTLYTKGLSTQKYIRYKNRYYPAYYDGR
draft_101296582	3300002898	Biogas Fermenter	LRRYRPLRKANVFIITNDFKRVFYGMRTLYTKGLSTQKYVRYKNRYYPAYYDGYHTYNVRIKR*
draft_103128682	3300002898	Biogas Fermenter	MRSRYMPLRKANVFITTRKDFKRVFYGMRTLYAKDATGKVYIRYKNKYYPAYSDGYYPSTYYVRL*
draft_103670481	3300002898	Biogas Fermenter	ANVFITKNFKRVFYGPRTLYAKDLTGRIYVRYKNKYYQAHYDGRHTYEVRIR*
draft_104362292	3300002898	Biogas Fermenter	MSYRLIKKANVYISKNYKKLFYGMRSLYAKDHTGRVYVRYKNKYYQAHYDGRYTYYVTIKR*
draft_104712721	3300002898	Biogas Fermenter	MKNKLFGVYKPLGKANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
draft_105028212	3300002898	Biogas Fermenter	MKNKLFGVYKPLGKANVFITKNFKRVFYGLRTLYAKDLTGRVYVRYKNKYYQAHYDGRHT
draft_105293251	3300002898	Biogas Fermenter	MSYRILKKANVYITKNFKRVFYGPRTLYVKDLRNPRSSDFSGRVYVRYKNKYYQAHYDGRYTYNVRL*
Ga0004534J46558_10178055	3300003306	Biogas Fermentantion	MKNKLFGVYKPLGKANVFITKNFKRVFYGPRTLYAKDLTGRIYVRYKNKYYQAHYDGRHTYNVRIR*
Ga0101770_10401585	3300006674	Food Waste	MSKYRPLRKANVYITKNFKKVFYGMRTLYVKDHTGRVFIRYKNRYYQAHFDGYYTYHVRLR*
Ga0101770_10724296	3300006674	Food Waste	MSKYRPLKKANVYISKNFKRVFYGMRTLYVKDHTGRVYIKYNNKYYQAHFDGYYTYHVRLR*
Ga0101770_11308312	3300006674	Food Waste	MSKYRPLRKANVYITKNFKKVFYGMRTLYVKDHTGRVFIRYKNRYYQAHFDGYHTYLVRLK*
Ga0101770_11350083	3300006674	Food Waste	MSKYRPXKKANVYISKNFKRVFYGMRTLYVKXHTGRVYIKYNNKYYQAHXDGYYTYHVRLR*
Ga0079223_102075551	3300006801	Agricultural Soil	MSRYKPLKKANVFISKNFKKVFYGMRTLYAKDATGKKYIRYKNRYYRAYYDGHYTYNVRLKR*
Ga0079223_103132982	3300006801	Agricultural Soil	MRSRYIPIKKAVVYISKNFQKVFYGVRTLYAKDATGKVYIRYKNKYYRAYSDGYYPTTYYVRL*
Ga0079223_105914701	3300006801	Agricultural Soil	LRRYRPLRKANVYISTNDFKKVFYGMRTLYTKGLSTQKYIRYKNRYYPVYYDGYHTYRARLKR*HNAWFLFSNR
Ga0101790_10523215	3300006840	Anaerobic Reactor	KANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
Ga0101790_1203992	3300006840	Anaerobic Reactor	MKNKLFGVYKPLGKANVFITKNFKRVFYGPRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
Ga0079224_1014831023	3300009095	Agricultural Soil	MPLRKANVFITTKKDFKRVFYGMRTLYAKDCTGKKYIRYKNRYYPVFYDGYHTYIARV*
Ga0079224_1025779001	3300009095	Agricultural Soil	KMKNKLFGVYKPLGKANVFITKNFKRVFYGPRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR*
Ga0079224_1050797852	3300009095	Agricultural Soil	MSKYKPLRKANVFITKNFKKVFYGTRTLYAKDYTGKKYIRYKNRYYRAYYDGHYTYNVRLKR*
Ga0116232_10060502	3300009588	Anaerobic Biogas Reactor	MNRYSPLRKVYTPLRKENVYISKNFKKVFYGMRTLYAKDHTGRVYVRYKNKYYQAFFDGRRTYNVRL*
Ga0116175_10145116	3300009648	Anaerobic Digestor Sludge	MSKYRPLKKANVYITKNFKKVFYGMRTLYVKDHTGRVYINYKNRYYQAHFDGYHTYLVRLK*
Ga0116169_12882701	3300009653	Anaerobic Digestor Sludge	SKYRPLKKANVYITKNFKRVFYGRRTLYVKDHTGRVYINYKNRYYQAHFDGYHTYLVRLK
Ga0116169_13076011	3300009653	Anaerobic Digestor Sludge	YITKNFKKVFYGRRTLYVKDCTGRVYINYKNRYYQAHFDGYHTYHVRLR*
Ga0116167_10498395	3300009654	Anaerobic Digestor Sludge	MSRYRPLKKANVYITKNFKRVFYGMRTLYVKDCTGRVYIKYKNRYYQAHFDGYHTYHVRLK*
Ga0116179_10368685	3300009657	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRLK*
Ga0116179_10641253	3300009657	Anaerobic Digestor Sludge	MGYRKLKIANVFIAKNLKKVFYGPRTLYVKDGDYSGRVYVRYKNKYYRAYYDGRYTYDVNIR*
Ga0116179_11493762	3300009657	Anaerobic Digestor Sludge	MRSRYIPIKKANVYISKNFKKVFYGFRTLYAKDATGKVYIRYKNKYYPAYSDGYYPSTYYVRL*
Ga0116179_12591301	3300009657	Anaerobic Digestor Sludge	MGYRKLKIANVFIAKNLKKVFYGPRTLYVKDGDYSGRVYVRYKNKYYKAFYDGRYTYEVNIR*
Ga0116181_11136893	3300009663	Anaerobic Digestor Sludge	SKNFKRVFYGMRTLYVKDHTGKVYIKYKNRYYQAHFDGYHTYHVRLK*
Ga0116181_11753082	3300009663	Anaerobic Digestor Sludge	LRRYRPLRKANVYISTNDFKKVFYGMRTLYTKGLSTQKYIRYKNRYYPAYYDGRYTYYVRLKR*
Ga0116181_12313962	3300009663	Anaerobic Digestor Sludge	MSKYKPYKKANVYIFKNDKRVFYGMRTIYSKDGTGKIFIRYKNRYHRVYHGGRNIYLSFI
Ga0116181_12880402	3300009663	Anaerobic Digestor Sludge	MSRYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRLR*
Ga0116180_10552262	3300009668	Anaerobic Digestor Sludge	MRSRYKPLRKANVFITTKKDFKRVFYGMRTLYAKDCTGKKYIRYKNRYYPVFYDGYHTYIARV*
Ga0116180_10919783	3300009668	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDNTGRVYINYKNRYYQAHFDGYHTYHVRLR*
Ga0116180_11998491	3300009668	Anaerobic Digestor Sludge	MGYRKLKIANVFIAKNLKKVFYGPRTLYVKDGDYSGRVYVRYKNKYYRAFYDGRYTYEVNIR*
Ga0116180_12289601	3300009668	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVFIKYNNKYYQAHFDGYHTYHVRLK*
Ga0116180_12735451	3300009668	Anaerobic Digestor Sludge	LRRYRPLRKANVYISTNDFKKVFYGMRTLYTKGLSTQKYVRYKNRYYPAYYDGYHTYNVRIKR*YNARFLF
Ga0116165_12029591	3300009712	Anaerobic Digestor Sludge	MSRYRPLKKANVYISKNFKKVFYGMRTLYVKDCTGRVYIKYKNRYYQAHYDGHYTYHVRLR*
Ga0116165_12663011	3300009712	Anaerobic Digestor Sludge	KRVFYGMRTLYVKDCTGRVYINYKNRYYQAHFDGYNTYRVRLK*
Ga0131851_10672932	3300009852	Compost	MSKYRSLRKXNVYITKNFKKVFYGMRTLYVKDHTGRVFIRYKNRYYQAHFDGYHTYHVRLK*
Ga0131850_10860101	3300009854	Compost	MSKYRPLRKANVYISKNFKKVFYGRRTLYVKDHTGRVYINYKNRYYQAHFD
Ga0131849_1159511	3300009947	Compost	MRKYRPLKKANVYITKNFKRVFYGMRTLYVKDHTGRVYINYKNRYYQAHFDGYH
Ga0131849_1416212	3300009947	Compost	MSKYRPLRKANVYITKNFKKVFYGMRTLYVKDHTGRVFIRYKNRYYQAHFDGYHTYHV
Ga0131848_10123443	3300009950	Compost	MSKYRPLRKANVYITKNFKKVFYGMRTLYVKDHTGRVFIRYKNRYYQAYFDGYHTYHVRLK*
Ga0131848_10834452	3300009950	Compost	MSKYRPLRKANVYITKNFKKVFYGMRTLYVKDHTGRVFIRYKNRYYQAHFDGYHTYHVRLK*
Ga0116250_101801131	3300010340	Anaerobic Digestor Sludge	MGYRKLKIANVFISKKLKKVFYGPRTLYVKDGDYSGRVYVRYKNKYYRAYYDGRYTYEVNIR*
Ga0116250_104112921	3300010340	Anaerobic Digestor Sludge	PLRKANVFITTKKDFKRVFYGMRTLYAKDCTGKKYIRYKNRYYPVFYDGYHTYIARV*
Ga0116250_104866972	3300010340	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRLR*
Ga0172378_109251642	3300014203	Groundwater	MSRYKPLRKANVYITKGFKRLYYGMRTLYAKDSTGNKYIRYKNRYYRAYYDGRHT
Ga0172377_106008752	3300014206	Landfill Leachate	MSRYKPLRKANVYITKGFKRLYYGMRTLYAKDSTGNKYIRYKNRYYRAYYDGRHTYNVRI
Ga0172382_104885401	3300015214	Landfill Leachate	MSKYKPLKKANVFISKNFKKVFYGMRTLYAKDATGKKYIRYKNRYYRAYYD
Ga0172382_105707562	3300015214	Landfill Leachate	MSRYKPLRKANVFISKNFKKVFYGMRTLYSKDSTDKKYIRYKNRYYRAYYDGRHTYNVRI
Ga0172382_106407772	3300015214	Landfill Leachate	LRRYKPLRKANVYIITNDFKKVFYGMRTLYIKGLSTQKYIRYKNRYYPAYFDGYNTYNVRLKRHNARVLFSDW
Ga0179954_10359211	3300019218	Anaerobic Digestor Sludge	KNFKRVFYGMRTLYVKDCTGRVYIKYKNRYYQAHFDGYHTYHVRLK
Ga0209508_10210112	3300025471	Anaerobic Digestor Sludge	MSKYRPLKKANVYITKNFKRVFYGRRTLYVKDHTGRVYINYKNRYYQAHFDGYHTYLVRL
Ga0208938_10457643	3300025587	Anaerobic Digestor Sludge	MSKYRPLKKANVYITKNFKKVFYGMRTLYVKDHTGRVYINYKNRYYQAHFDGYHTYLVRL
Ga0209720_11160172	3300025605	Anaerobic Digestor Sludge	MSRYRPLKKANVYITKNFKRVFYGMRTLYVKDCTGRVYIKYKNRYYQAHFDGYHTYHVRL
Ga0209608_10954252	3300025609	Anaerobic Digestor Sludge	MSKYRPLKKANVYITKNFKKVFYGRRTLYVKDCTGRVYINYKNRYYQAHFDGYHTYLVRL
Ga0208693_10501873	3300025618	Anaerobic Digestor Sludge	MGYRKLKIANVFIAKNLKKVFYGPRTLYVKDGDYSGRVYVRYKNKYYRAYYDGRYTYDVNIR
Ga0208693_10614042	3300025618	Anaerobic Digestor Sludge	MRSRYMPLRKANVFITTKKDFKRVFYGMRTLYAKDCTGKKYIRYKNRYYPVFYDGYHTYIARV
Ga0208693_11004433	3300025618	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTY
Ga0208823_11096432	3300025657	Anaerobic Digestor Sludge	LRRYRPLRKANVYISTNDFKKVFYGMRTLYTKGLSTQKYIRYKNRYYPAYYDGRYTYYVRLKR
Ga0208823_11161023	3300025657	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHF
Ga0208564_10441633	3300025683	Anaerobic Digestor Sludge	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTYHVRL
Ga0208564_10877023	3300025683	Anaerobic Digestor Sludge	MGYRKLKIANVFISKKLKKVFYGPRTLYVKDGDYSGRVYVRYKNKYYRAYYDGRYTYDVNIR
Ga0209537_10521264	3300027510	Biogas Fermentantion	MRSRYIPIKKANVYISNNFKKVFYGFRTLYAKDATGKVYIRYKNKYYRAYSDGYYPTTYYVRLEKKK
Ga0209537_10562064	3300027510	Biogas Fermentantion	MSKYRPLRKANVYITKNFKRVFYGRRTLYVKDHTGRVYIKYKNRYYQAHFDGYHTY
Ga0209537_10682622	3300027510	Biogas Fermentantion	MRKYRPLRKANVYITKNFKRVFYGRRTLYVKDCTGRVYIKYNNKYYQAHYDGYNTYNVRI
Ga0209537_10866022	3300027510	Biogas Fermentantion	MKNKLFGVYKPIGKANVFITKNFKRVFYGFRTLYAKDLTGRVYVRYKNKYYQAHYDGRHTYNVRIR
Ga0209537_10898922	3300027510	Biogas Fermentantion	MSKYRPLKKANVYISKNFKRVFYGRRTLYVKDCTGRVYIKYKNRYYQAHFDGYNTYHVRL
Ga0209075_10455633	3300027711	Agricultural Soil	LRRYRPLRKANVYISTNDFKKVFYGMRTLYTKGLSTQKYIRYKNRYYPVYYDGYHTYRARLKRXHNAWFLFSNRSPR
Ga0209075_11461362	3300027711	Agricultural Soil	MSRYKPLKKANVFISKNFKKVFYGMRTLYAKDATGKKYIRYKNRYYRAYYDGHYTYNVRLKR
Ga0209075_12242942	3300027711	Agricultural Soil	MSRYKPLKKANVFISKNFKKVFYGMRTLYAKDATGKKYIRYKNRYYRAYYDGHYTYNVRLKRXYNVRFLFSNRLSG
Ga0209075_12353082	3300027711	Agricultural Soil	MSRYKRLKKANVFISKNFKKVFYGMRTLYAKDSTGKKYIRYKNRYYRAYYDGHYTYNVRL
Ga0265294_104375771	3300028602	Groundwater	ITKGFKRLYYGMRTLYAKDSTGNKYIRYKNRYYRAYYDGRHTYNVRI
Ga0265293_102379422	3300028603	Landfill Leachate	MSRYKPLRKANVFISKNFKKVFYGMRTLYSKDSTDKKYIRYKNRYYRAYYDGHYTYNVRL
Ga0134854_10089725	3300029822	Fermentation Pit Mud	MSYRKLKKANVYISKNFKKVFYGMRTLYVKDLRNTRYSDFSGKVYVRYKNKYYQAHFDGRNTYNVRL
Ga0134854_10322272	3300029822	Fermentation Pit Mud	MSYRLLKKANVYISKNFKKIFYGMRTLYAKDHTGRVYVRYKNKYYQAHWDGRYTYNVRL
Ga0134854_10635641	3300029822	Fermentation Pit Mud	SKNFKKIFYGMRTLYVKDLRNTRYSDFTGKVYVRYKNKYYQAHYDGRNTYNVRIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075995

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences